Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283990 | sp|Q9SSK5|MLP43_ARATH | 36.601 | 153 | 93 | 4 | 3 | 152 | 7 | 158 | 4.66e-23 | 92.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283990 | A0A072TPY0 | 90.385 | 156 | 15 | 0 | 1 | 156 | 1 | 156 | 3.50e-100 | 294 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002540 | Msa1283990 | 0.801177 | 1.018056e-48 | -8.615850e-47 |
| Msa0008340 | Msa1283990 | 0.809683 | 1.676565e-50 | -8.615850e-47 |
| Msa0016670 | Msa1283990 | 0.827034 | 1.955239e-54 | -8.615850e-47 |
| Msa0021810 | Msa1283990 | 0.824344 | 8.495053e-54 | -8.615850e-47 |
| Msa0032370 | Msa1283990 | 0.820817 | 5.613146e-53 | -8.615850e-47 |
| Msa0032840 | Msa1283990 | -0.838429 | 2.890619e-57 | -8.615850e-47 |
| Msa0036130 | Msa1283990 | 0.803859 | 2.850405e-49 | -8.615850e-47 |
| Msa0041620 | Msa1283990 | 0.804577 | 2.020348e-49 | -8.615850e-47 |
| Msa0043670 | Msa1283990 | -0.809866 | 1.530906e-50 | -8.615850e-47 |
| Msa0044020 | Msa1283990 | 0.805272 | 1.446157e-49 | -8.615850e-47 |
| Msa0046100 | Msa1283990 | 0.803199 | 3.907019e-49 | -8.615850e-47 |
| Msa0069330 | Msa1283990 | 0.805233 | 1.473348e-49 | -8.615850e-47 |
| Msa0073670 | Msa1283990 | 0.845917 | 3.011729e-59 | -8.615850e-47 |
| Msa0077200 | Msa1283990 | 0.815735 | 7.939552e-52 | -8.615850e-47 |
| Msa0084890 | Msa1283990 | 0.813812 | 2.117893e-51 | -8.615850e-47 |
| Msa0090590 | Msa1283990 | 0.813739 | 2.197535e-51 | -8.615850e-47 |
| Msa0092670 | Msa1283990 | -0.803895 | 2.802727e-49 | -8.615850e-47 |
| Msa0092690 | Msa1283990 | -0.803946 | 2.734522e-49 | -8.615850e-47 |
| Msa0092740 | Msa1283990 | -0.813091 | 3.050365e-51 | -8.615850e-47 |
| Msa0094010 | Msa1283990 | 0.800072 | 1.710973e-48 | -8.615850e-47 |
| Msa0094950 | Msa1283990 | 0.818988 | 1.470237e-52 | -8.615850e-47 |
| Msa0096670 | Msa1283990 | 0.846676 | 1.870409e-59 | -8.615850e-47 |
| Msa0099190 | Msa1283990 | 0.800129 | 1.665703e-48 | -8.615850e-47 |
| Msa0104550 | Msa1283990 | 0.800022 | 1.751646e-48 | -8.615850e-47 |
| Msa0105420 | Msa1283990 | 0.810310 | 1.228246e-50 | -8.615850e-47 |
| Msa0110970 | Msa1283990 | 0.824649 | 7.198252e-54 | -8.615850e-47 |
| Msa0114540 | Msa1283990 | -0.844429 | 7.601315e-59 | -8.615850e-47 |
| Msa0609450 | Msa1283990 | 0.805486 | 1.304361e-49 | -8.615850e-47 |
| Msa0619510 | Msa1283990 | 0.800069 | 1.713148e-48 | -8.615850e-47 |
| Msa0620990 | Msa1283990 | 0.803639 | 3.166998e-49 | -8.615850e-47 |
| Msa0625790 | Msa1283990 | 0.806578 | 7.686621e-50 | -8.615850e-47 |
| Msa0628890 | Msa1283990 | 0.800520 | 1.386587e-48 | -8.615850e-47 |
| Msa0639120 | Msa1283990 | 0.822477 | 2.319436e-53 | -8.615850e-47 |
| Msa0642720 | Msa1283990 | 0.843885 | 1.064195e-58 | -8.615850e-47 |
| Msa0670980 | Msa1283990 | 0.809154 | 2.176600e-50 | -8.615850e-47 |
| Msa0680240 | Msa1283990 | 0.817251 | 3.633157e-52 | -8.615850e-47 |
| Msa0684500 | Msa1283990 | 0.800221 | 1.595525e-48 | -8.615850e-47 |
| Msa0687630 | Msa1283990 | 0.814157 | 1.777008e-51 | -8.615850e-47 |
| Msa0692080 | Msa1283990 | 0.815517 | 8.877767e-52 | -8.615850e-47 |
| Msa0701280 | Msa1283990 | 0.814961 | 1.180009e-51 | -8.615850e-47 |
| Msa0702340 | Msa1283990 | 0.832332 | 1.004454e-55 | -8.615850e-47 |
| Msa0702590 | Msa1283990 | 0.830252 | 3.260367e-55 | -8.615850e-47 |
| Msa0702660 | Msa1283990 | 0.830869 | 2.303461e-55 | -8.615850e-47 |
| Msa0711490 | Msa1283990 | 0.802066 | 6.691062e-49 | -8.615850e-47 |
| Msa0713820 | Msa1283990 | 0.819203 | 1.313831e-52 | -8.615850e-47 |
| Msa0753770 | Msa1283990 | 0.803791 | 2.945287e-49 | -8.615850e-47 |
| Msa0755340 | Msa1283990 | 0.806218 | 9.154362e-50 | -8.615850e-47 |
| Msa0756060 | Msa1283990 | 0.801965 | 7.020956e-49 | -8.615850e-47 |
| Msa0762210 | Msa1283990 | 0.800022 | 1.750940e-48 | -8.615850e-47 |
| Msa0787750 | Msa1283990 | 0.802998 | 4.300078e-49 | -8.615850e-47 |
| Msa0788770 | Msa1283990 | 0.801592 | 8.372465e-49 | -8.615850e-47 |
| Msa0793720 | Msa1283990 | 0.815214 | 1.036539e-51 | -8.615850e-47 |
| Msa0797750 | Msa1283990 | 0.830689 | 2.549097e-55 | -8.615850e-47 |
| Msa0824640 | Msa1283990 | 0.811343 | 7.341669e-51 | -8.615850e-47 |
| Msa0835280 | Msa1283990 | 0.809559 | 1.782702e-50 | -8.615850e-47 |
| Msa0840260 | Msa1283990 | 0.805069 | 1.594970e-49 | -8.615850e-47 |
| Msa0124340 | Msa1283990 | 0.820001 | 8.636610e-53 | -8.615850e-47 |
| Msa0124990 | Msa1283990 | 0.810508 | 1.113338e-50 | -8.615850e-47 |
| Msa0125770 | Msa1283990 | 0.806798 | 6.905586e-50 | -8.615850e-47 |
| Msa0130240 | Msa1283990 | 0.806757 | 7.045015e-50 | -8.615850e-47 |
| Msa0137610 | Msa1283990 | -0.819822 | 9.491010e-53 | -8.615850e-47 |
| Msa0147000 | Msa1283990 | -0.815833 | 7.550690e-52 | -8.615850e-47 |
| Msa0172350 | Msa1283990 | 0.806414 | 8.321808e-50 | -8.615850e-47 |
| Msa0172960 | Msa1283990 | -0.814336 | 1.622981e-51 | -8.615850e-47 |
| Msa0183830 | Msa1283990 | 0.814460 | 1.523089e-51 | -8.615850e-47 |
| Msa0193890 | Msa1283990 | 0.811564 | 6.573643e-51 | -8.615850e-47 |
| Msa0222920 | Msa1283990 | 0.854568 | 1.128395e-61 | -8.615850e-47 |
| Msa0230150 | Msa1283990 | 0.801176 | 1.018599e-48 | -8.615850e-47 |
| Msa0230550 | Msa1283990 | -0.834097 | 3.648556e-56 | -8.615850e-47 |
| Msa0236980 | Msa1283990 | 0.800682 | 1.285336e-48 | -8.615850e-47 |
| Msa1224840 | Msa1283990 | 0.832870 | 7.387215e-56 | -8.615850e-47 |
| Msa1226620 | Msa1283990 | 0.803799 | 2.933463e-49 | -8.615850e-47 |
| Msa1228890 | Msa1283990 | 0.837032 | 6.601938e-57 | -8.615850e-47 |
| Msa1236100 | Msa1283990 | 0.829774 | 4.264533e-55 | -8.615850e-47 |
| Msa1237030 | Msa1283990 | 0.808572 | 2.900280e-50 | -8.615850e-47 |
| Msa1243010 | Msa1283990 | 0.822932 | 1.817655e-53 | -8.615850e-47 |
| Msa1243040 | Msa1283990 | 0.831792 | 1.365154e-55 | -8.615850e-47 |
| Msa1252190 | Msa1283990 | 0.843166 | 1.656309e-58 | -8.615850e-47 |
| Msa1274060 | Msa1283990 | 0.830311 | 3.154714e-55 | -8.615850e-47 |
| Msa1274280 | Msa1283990 | 0.841849 | 3.703347e-58 | -8.615850e-47 |
| Msa1283990 | Msa1284040 | 0.808148 | 3.571169e-50 | -8.615850e-47 |
| Msa1283990 | Msa1292830 | 0.823864 | 1.100753e-53 | -8.615850e-47 |
| Msa1283990 | Msa1295630 | 0.816246 | 6.103564e-52 | -8.615850e-47 |
| Msa1283990 | Msa1299360 | 0.827667 | 1.378727e-54 | -8.615850e-47 |
| Msa1283990 | Msa1306740 | 0.807716 | 4.413346e-50 | -8.615850e-47 |
| Msa1283990 | Msa1307950 | 0.810913 | 9.098083e-51 | -8.615850e-47 |
| Msa1283990 | Msa1309130 | 0.807606 | 4.656275e-50 | -8.615850e-47 |
| Msa1283990 | Msa1315870 | 0.811210 | 7.847704e-51 | -8.615850e-47 |
| Msa1283990 | Msa1318120 | 0.816387 | 5.676211e-52 | -8.615850e-47 |
| Msa1283990 | Msa1323050 | 0.814092 | 1.836805e-51 | -8.615850e-47 |
| Msa1283990 | Msa1335940 | 0.827512 | 1.501792e-54 | -8.615850e-47 |
| Msa1283990 | Msa1337730 | 0.809117 | 2.217050e-50 | -8.615850e-47 |
| Msa1283990 | Msa1340510 | 0.811151 | 8.081610e-51 | -8.615850e-47 |
| Msa1283990 | Msa1344850 | 0.802454 | 5.566376e-49 | -8.615850e-47 |
| Msa1283990 | Msa1346370 | 0.802147 | 6.440674e-49 | -8.615850e-47 |
| Msa1283990 | Msa1351760 | 0.801595 | 8.359954e-49 | -8.615850e-47 |
| Msa1283990 | Msa1362510 | 0.802804 | 4.714958e-49 | -8.615850e-47 |
| Msa1283990 | Msa1365150 | 0.820635 | 6.180799e-53 | -8.615850e-47 |
| Msa1283990 | Msa1367880 | 0.824528 | 7.688228e-54 | -8.615850e-47 |
| Msa1283990 | Msa1373330 | 0.858756 | 6.620342e-63 | -8.615850e-47 |
| Msa1283990 | Msa1385070 | 0.812200 | 4.778448e-51 | -8.615850e-47 |
| Msa1283990 | Msa1390310 | 0.818453 | 1.944669e-52 | -8.615850e-47 |
| Msa1283990 | Msa1404190 | 0.820897 | 5.380894e-53 | -8.615850e-47 |
| Msa1283990 | Msa1406040 | 0.822336 | 2.501542e-53 | -8.615850e-47 |
| Msa1283990 | Msa1438640 | 0.804523 | 2.073577e-49 | -8.615850e-47 |
| Msa1283990 | Msa1440260 | -0.812440 | 4.234389e-51 | -8.615850e-47 |
| Msa1283990 | Msa1459180 | 0.844414 | 7.675260e-59 | -8.615850e-47 |
| Msa1283990 | Msa1461490 | 0.811716 | 6.092614e-51 | -8.615850e-47 |
| Msa1283990 | Msa1466460 | 0.819942 | 8.909090e-53 | -8.615850e-47 |
| Msa1283990 | Msa1466990 | 0.849272 | 3.597342e-60 | -8.615850e-47 |
| Msa0378980 | Msa1283990 | 0.812148 | 4.904348e-51 | -8.615850e-47 |
| Msa0410500 | Msa1283990 | 0.819818 | 9.513537e-53 | -8.615850e-47 |
| Msa0411140 | Msa1283990 | 0.800182 | 1.625069e-48 | -8.615850e-47 |
| Msa0411170 | Msa1283990 | 0.804341 | 2.263290e-49 | -8.615850e-47 |
| Msa0413450 | Msa1283990 | 0.829190 | 5.912516e-55 | -8.615850e-47 |
| Msa0414950 | Msa1283990 | -0.807838 | 4.156018e-50 | -8.615850e-47 |
| Msa0422850 | Msa1283990 | 0.828596 | 8.235326e-55 | -8.615850e-47 |
| Msa0422930 | Msa1283990 | 0.823066 | 1.691586e-53 | -8.615850e-47 |
| Msa0423040 | Msa1283990 | 0.806323 | 8.699230e-50 | -8.615850e-47 |
| Msa0449820 | Msa1283990 | 0.801983 | 6.961345e-49 | -8.615850e-47 |
| Msa0452960 | Msa1283990 | 0.818447 | 1.950948e-52 | -8.615850e-47 |
| Msa0462990 | Msa1283990 | 0.802002 | 6.897545e-49 | -8.615850e-47 |
| Msa0469910 | Msa1283990 | -0.802228 | 6.196319e-49 | -8.615850e-47 |
| Msa0474950 | Msa1283990 | 0.800006 | 1.764883e-48 | -8.615850e-47 |
| Msa0986920 | Msa1283990 | 0.816279 | 6.001313e-52 | -8.615850e-47 |
| Msa0993530 | Msa1283990 | 0.802506 | 5.432546e-49 | -8.615850e-47 |
| Msa0996080 | Msa1283990 | 0.819361 | 1.209140e-52 | -8.615850e-47 |
| Msa1004420 | Msa1283990 | 0.813228 | 2.847127e-51 | -8.615850e-47 |
| Msa1008060 | Msa1283990 | -0.809467 | 1.865689e-50 | -8.615850e-47 |
| Msa1012810 | Msa1283990 | 0.802113 | 6.543365e-49 | -8.615850e-47 |
| Msa1022970 | Msa1283990 | 0.807071 | 6.045190e-50 | -8.615850e-47 |
| Msa1037920 | Msa1283990 | 0.830481 | 2.867075e-55 | -8.615850e-47 |
| Msa1049010 | Msa1283990 | 0.825883 | 3.676509e-54 | -8.615850e-47 |
| Msa1054240 | Msa1283990 | 0.807357 | 5.257831e-50 | -8.615850e-47 |
| Msa1082700 | Msa1283990 | 0.821393 | 4.135353e-53 | -8.615850e-47 |
| Msa1097640 | Msa1283990 | 0.802023 | 6.830061e-49 | -8.615850e-47 |
| Msa0238890 | Msa1283990 | 0.802299 | 5.992969e-49 | -8.615850e-47 |
| Msa0241800 | Msa1283990 | 0.835105 | 2.036165e-56 | -8.615850e-47 |
| Msa0260240 | Msa1283990 | 0.816920 | 4.312879e-52 | -8.615850e-47 |
| Msa0260280 | Msa1283990 | 0.818182 | 2.240484e-52 | -8.615850e-47 |
| Msa0264350 | Msa1283990 | 0.834315 | 3.218016e-56 | -8.615850e-47 |
| Msa0267760 | Msa1283990 | 0.806341 | 8.623494e-50 | -8.615850e-47 |
| Msa0274680 | Msa1283990 | 0.803080 | 4.135192e-49 | -8.615850e-47 |
| Msa0281360 | Msa1283990 | 0.821170 | 4.654460e-53 | -8.615850e-47 |
| Msa0294390 | Msa1283990 | 0.806277 | 8.895406e-50 | -8.615850e-47 |
| Msa0299890 | Msa1283990 | 0.820556 | 6.443556e-53 | -8.615850e-47 |
| Msa0302450 | Msa1283990 | 0.827960 | 1.171771e-54 | -8.615850e-47 |
| Msa0304260 | Msa1283990 | 0.816788 | 4.615614e-52 | -8.615850e-47 |
| Msa0304300 | Msa1283990 | 0.825576 | 4.347365e-54 | -8.615850e-47 |
| Msa0304510 | Msa1283990 | 0.803393 | 3.562402e-49 | -8.615850e-47 |
| Msa0328210 | Msa1283990 | 0.809557 | 1.783896e-50 | -8.615850e-47 |
| Msa0334040 | Msa1283990 | 0.812734 | 3.652356e-51 | -8.615850e-47 |
| Msa0339640 | Msa1283990 | 0.801086 | 1.062655e-48 | -8.615850e-47 |
| Msa0355270 | Msa1283990 | 0.810116 | 1.352635e-50 | -8.615850e-47 |
| Msa1127890 | Msa1283990 | 0.811491 | 6.818665e-51 | -8.615850e-47 |
| Msa1129980 | Msa1283990 | 0.813966 | 1.958048e-51 | -8.615850e-47 |
| Msa1139810 | Msa1283990 | 0.814118 | 1.813073e-51 | -8.615850e-47 |
| Msa1165870 | Msa1283990 | 0.806179 | 9.326667e-50 | -8.615850e-47 |
| Msa1175330 | Msa1283990 | 0.814339 | 1.620541e-51 | -8.615850e-47 |
| Msa1179940 | Msa1283990 | 0.810279 | 1.247209e-50 | -8.615850e-47 |
| Msa1179970 | Msa1283990 | 0.807941 | 3.951649e-50 | -8.615850e-47 |
| Msa1182770 | Msa1283990 | 0.805723 | 1.163265e-49 | -8.615850e-47 |
| Msa1183660 | Msa1283990 | 0.805311 | 1.419215e-49 | -8.615850e-47 |
| Msa1185540 | Msa1283990 | 0.807022 | 6.192940e-50 | -8.615850e-47 |
| Msa1193950 | Msa1283990 | -0.808784 | 2.612956e-50 | -8.615850e-47 |
| Msa0505150 | Msa1283990 | 0.804802 | 1.813788e-49 | -8.615850e-47 |
| Msa0521880 | Msa1283990 | 0.808650 | 2.789878e-50 | -8.615850e-47 |
| Msa0526710 | Msa1283990 | 0.800357 | 1.497060e-48 | -8.615850e-47 |
| Msa0544830 | Msa1283990 | 0.828396 | 9.201406e-55 | -8.615850e-47 |
| Msa0546300 | Msa1283990 | 0.808358 | 3.221100e-50 | -8.615850e-47 |
| Msa0552810 | Msa1283990 | 0.819734 | 9.940287e-53 | -8.615850e-47 |
| Msa0560080 | Msa1283990 | 0.801599 | 8.346697e-49 | -8.615850e-47 |
| Msa0560470 | Msa1283990 | 0.826765 | 2.267090e-54 | -8.615850e-47 |
| Msa0574890 | Msa1283990 | 0.832523 | 9.005540e-56 | -8.615850e-47 |
| Msa0576690 | Msa1283990 | 0.806040 | 9.976286e-50 | -8.615850e-47 |
| Msa0579720 | Msa1283990 | 0.802669 | 5.027689e-49 | -8.615850e-47 |
| Msa0587940 | Msa1283990 | 0.831793 | 1.364823e-55 | -8.615850e-47 |
| Msa0850960 | Msa1283990 | 0.803452 | 3.462241e-49 | -8.615850e-47 |
| Msa0864010 | Msa1283990 | 0.818002 | 2.460368e-52 | -8.615850e-47 |
| Msa0896220 | Msa1283990 | 0.818844 | 1.585443e-52 | -8.615850e-47 |
| Msa0896970 | Msa1283990 | 0.808598 | 2.863449e-50 | -8.615850e-47 |
| Msa0922540 | Msa1283990 | 0.801960 | 7.035938e-49 | -8.615850e-47 |
| Msa0930780 | Msa1283990 | 0.880540 | 5.046739e-70 | -8.615850e-47 |
| Msa0936340 | Msa1283990 | 0.805595 | 1.237410e-49 | -8.615850e-47 |
| Msa0937670 | Msa1283990 | 0.809360 | 1.966341e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283990 | MtrunA17_Chr8g0355801 | 90.385 | 156 | 15 | 0 | 1 | 156 | 1 | 156 | 6.74e-104 | 294 |
| Msa1283990 | MtrunA17_Chr8g0355811 | 91.026 | 156 | 14 | 0 | 1 | 156 | 1 | 156 | 7.60e-104 | 293 |
| Msa1283990 | MtrunA17_Chr8g0355791 | 86.538 | 156 | 21 | 0 | 1 | 156 | 1 | 156 | 1.31e-98 | 280 |
| Msa1283990 | MtrunA17_Chr8g0355821 | 85.161 | 155 | 23 | 0 | 1 | 155 | 1 | 155 | 1.78e-98 | 280 |
| Msa1283990 | MtrunA17_Chr8g0355771 | 85.256 | 156 | 23 | 0 | 1 | 156 | 1 | 156 | 3.02e-97 | 277 |
| Msa1283990 | MtrunA17_Chr8g0355741 | 77.070 | 157 | 35 | 1 | 1 | 156 | 1 | 157 | 2.34e-86 | 249 |
| Msa1283990 | MtrunA17_Chr8g0355661 | 71.975 | 157 | 42 | 2 | 1 | 156 | 1 | 156 | 2.49e-80 | 234 |
| Msa1283990 | MtrunA17_Chr8g0355721 | 71.895 | 153 | 42 | 1 | 1 | 152 | 1 | 153 | 1.09e-79 | 233 |
| Msa1283990 | MtrunA17_Chr8g0355781 | 71.053 | 152 | 43 | 1 | 1 | 151 | 1 | 152 | 5.23e-78 | 228 |
| Msa1283990 | MtrunA17_Chr8g0355761 | 68.421 | 152 | 47 | 1 | 1 | 151 | 1 | 152 | 6.50e-76 | 223 |
| Msa1283990 | MtrunA17_Chr8g0355641 | 65.806 | 155 | 52 | 1 | 1 | 154 | 1 | 155 | 3.92e-74 | 218 |
| Msa1283990 | MtrunA17_Chr1g0160371 | 43.137 | 153 | 83 | 3 | 1 | 150 | 1 | 152 | 2.36e-38 | 127 |
| Msa1283990 | MtrunA17_Chr1g0160381 | 39.869 | 153 | 88 | 3 | 1 | 150 | 5 | 156 | 3.21e-37 | 125 |
| Msa1283990 | MtrunA17_Chr1g0160391 | 39.744 | 156 | 85 | 5 | 1 | 148 | 1 | 155 | 7.51e-29 | 103 |
| Msa1283990 | MtrunA17_Chr8g0339261 | 32.667 | 150 | 97 | 4 | 6 | 153 | 8 | 155 | 7.02e-26 | 96.3 |
| Msa1283990 | MtrunA17_Chr1g0160801 | 38.514 | 148 | 81 | 6 | 7 | 151 | 7 | 147 | 6.86e-22 | 85.9 |
| Msa1283990 | MtrunA17_Chr1g0160351 | 43.011 | 93 | 50 | 2 | 61 | 150 | 1 | 93 | 3.14e-20 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283990 | AT5G28010.1 | 34.641 | 153 | 96 | 4 | 3 | 152 | 15 | 166 | 4.92e-25 | 94.7 |
| Msa1283990 | AT5G28010.2 | 34.641 | 153 | 96 | 4 | 3 | 152 | 15 | 166 | 4.92e-25 | 94.7 |
| Msa1283990 | AT1G70890.1 | 36.601 | 153 | 93 | 4 | 3 | 152 | 7 | 158 | 4.74e-24 | 92.0 |
| Msa1283990 | AT1G70840.1 | 34.641 | 153 | 96 | 4 | 3 | 152 | 20 | 171 | 1.15e-23 | 91.3 |
| Msa1283990 | AT1G70830.5 | 35.294 | 153 | 95 | 4 | 3 | 152 | 22 | 173 | 6.35e-23 | 89.4 |
| Msa1283990 | AT1G70830.3 | 35.065 | 154 | 96 | 4 | 3 | 153 | 22 | 174 | 8.04e-23 | 89.7 |
| Msa1283990 | AT5G28000.1 | 33.333 | 153 | 98 | 4 | 3 | 152 | 13 | 164 | 5.42e-22 | 86.7 |
| Msa1283990 | AT1G70830.2 | 35.065 | 154 | 96 | 4 | 3 | 153 | 22 | 174 | 5.59e-22 | 89.0 |
| Msa1283990 | AT1G70830.4 | 35.294 | 153 | 95 | 4 | 3 | 152 | 137 | 288 | 7.94e-22 | 89.0 |
| Msa1283990 | AT1G70830.4 | 32.990 | 97 | 63 | 2 | 59 | 153 | 31 | 127 | 1.40e-11 | 61.2 |
| Msa1283990 | AT1G70830.1 | 35.065 | 154 | 96 | 4 | 3 | 153 | 22 | 174 | 9.81e-22 | 89.7 |
| Msa1283990 | AT1G70830.1 | 35.294 | 153 | 95 | 4 | 3 | 152 | 184 | 335 | 2.44e-21 | 88.6 |
| Msa1283990 | AT1G70850.3 | 36.364 | 143 | 87 | 4 | 13 | 152 | 175 | 316 | 5.96e-21 | 87.0 |
| Msa1283990 | AT1G70850.3 | 34.000 | 150 | 95 | 4 | 3 | 149 | 9 | 157 | 2.15e-20 | 85.9 |
| Msa1283990 | AT1G70850.1 | 36.364 | 143 | 87 | 4 | 13 | 152 | 175 | 316 | 5.96e-21 | 87.0 |
| Msa1283990 | AT1G70850.1 | 34.000 | 150 | 95 | 4 | 3 | 149 | 9 | 157 | 2.15e-20 | 85.9 |
| Msa1283990 | AT1G70850.2 | 34.000 | 150 | 95 | 4 | 3 | 149 | 9 | 157 | 1.09e-20 | 85.1 |
| Msa1283990 | AT4G23670.1 | 32.680 | 153 | 99 | 4 | 1 | 151 | 1 | 151 | 2.01e-20 | 82.4 |
| Msa1283990 | AT1G70870.1 | 43.750 | 96 | 52 | 2 | 56 | 150 | 44 | 138 | 7.01e-20 | 80.5 |
| Msa1283990 | AT1G14930.1 | 28.571 | 154 | 106 | 4 | 1 | 152 | 1 | 152 | 1.44e-18 | 77.8 |
| Msa1283990 | AT1G23120.1 | 30.000 | 150 | 99 | 4 | 1 | 149 | 1 | 145 | 2.52e-18 | 77.0 |
| Msa1283990 | AT1G23120.2 | 30.496 | 141 | 92 | 4 | 10 | 149 | 60 | 195 | 7.59e-18 | 77.0 |
| Msa1283990 | AT2G01520.1 | 28.105 | 153 | 106 | 4 | 1 | 151 | 1 | 151 | 8.58e-18 | 75.5 |
| Msa1283990 | AT1G24020.1 | 32.903 | 155 | 95 | 4 | 1 | 150 | 1 | 151 | 5.94e-17 | 73.6 |
| Msa1283990 | AT1G24020.2 | 32.903 | 155 | 95 | 4 | 1 | 150 | 1 | 151 | 5.94e-17 | 73.6 |
| Msa1283990 | AT1G23130.1 | 28.188 | 149 | 104 | 3 | 3 | 149 | 10 | 157 | 1.19e-16 | 72.8 |
| Msa1283990 | AT1G70880.1 | 30.719 | 153 | 102 | 4 | 3 | 152 | 8 | 159 | 1.34e-16 | 72.8 |
| Msa1283990 | AT1G14940.1 | 27.273 | 154 | 108 | 4 | 1 | 152 | 1 | 152 | 1.19e-15 | 70.1 |
| Msa1283990 | AT2G01530.1 | 28.105 | 153 | 106 | 4 | 1 | 151 | 1 | 151 | 1.60e-15 | 69.7 |
| Msa1283990 | AT4G14060.1 | 27.451 | 153 | 107 | 4 | 1 | 151 | 1 | 151 | 1.98e-15 | 69.3 |
| Msa1283990 | AT4G23680.1 | 27.632 | 152 | 106 | 4 | 1 | 150 | 1 | 150 | 2.00e-15 | 69.3 |
| Msa1283990 | AT1G14950.1 | 26.623 | 154 | 109 | 4 | 1 | 152 | 1 | 152 | 7.60e-15 | 68.2 |
| Msa1283990 | AT1G30990.1 | 28.477 | 151 | 103 | 5 | 1 | 149 | 1 | 148 | 8.19e-15 | 67.8 |
| Msa1283990 | AT3G26460.1 | 28.105 | 153 | 107 | 3 | 1 | 151 | 1 | 152 | 9.73e-14 | 65.1 |
| Msa1283990 | AT1G35310.1 | 28.777 | 139 | 95 | 4 | 13 | 149 | 12 | 148 | 3.60e-13 | 63.5 |
| Msa1283990 | AT1G14960.1 | 25.161 | 155 | 112 | 4 | 1 | 153 | 1 | 153 | 1.30e-12 | 62.0 |
| Msa1283990 | AT3G26450.1 | 25.325 | 154 | 110 | 5 | 1 | 151 | 1 | 152 | 2.32e-11 | 58.9 |
Find 38 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGAAGAAAGAAACAAATA+TGG | 0.227238 | 8_3:+25873035 | None:intergenic |
| TTCCCAGCGAGCACCATATT+TGG | 0.245489 | 8_3:+25872974 | None:intergenic |
| AATAAGGAGTTATGCTCTAA+TGG | 0.306178 | 8_3:-25869517 | Msa1283990:three_prime_UTR |
| ATAAGGAGTTATGCTCTAAT+GGG | 0.361598 | 8_3:-25869516 | Msa1283990:three_prime_UTR |
| TGGAGATATTGAAAACTATA+AGG | 0.391039 | 8_3:-25869738 | Msa1283990:CDS |
| GTGATCAAGTCATTTGAATA+AGG | 0.403196 | 8_3:-25869533 | Msa1283990:three_prime_UTR |
| AAACATTGGACTTATGTCAT+AGG | 0.403651 | 8_3:-25872803 | Msa1283990:intron |
| CACAAACTTTGTGCACTTCG+TGG | 0.405990 | 8_3:+25872885 | None:intergenic |
| ATGGAAGTTCTGCTGTTAGA+TGG | 0.407851 | 8_3:-25869679 | Msa1283990:CDS |
| AAGATCACTTACAAGCTGTT+TGG | 0.418393 | 8_3:-25869761 | Msa1283990:CDS |
| ATCTTCACCTTCATGAAGCT+TGG | 0.441586 | 8_3:+25872847 | None:intergenic |
| GGGAAGCTTATCACTGAACT+TGG | 0.453302 | 8_3:-25872956 | Msa1283990:CDS |
| AGGTAGTCCATCCAGCCATT+TGG | 0.456227 | 8_3:+25869617 | None:intergenic |
| AAAAGCACTAGAGATATTGA+TGG | 0.477335 | 8_3:-25869590 | Msa1283990:CDS |
| ATCACTTACAAGCTGTTTGG+TGG | 0.478540 | 8_3:-25869758 | Msa1283990:CDS |
| TTTCCAAATATGGTGCTCGC+TGG | 0.484997 | 8_3:-25872977 | Msa1283990:exon |
| GAGAAGAAAGAAACAAATAT+GGG | 0.486273 | 8_3:+25873036 | None:intergenic |
| CTAGTGTGATGTTTGTATAA+TGG | 0.492641 | 8_3:-25869419 | Msa1283990:three_prime_UTR |
| AGCTTCATGAAGGTGAAGAT+TGG | 0.494334 | 8_3:-25872844 | Msa1283990:CDS |
| TTCCAAATATGGTGCTCGCT+GGG | 0.501877 | 8_3:-25872976 | Msa1283990:exon |
| GAGGATATTGATACTCCAAA+TGG | 0.508694 | 8_3:-25869632 | Msa1283990:CDS |
| AGATTGGCATCACAATGATT+CGG | 0.515908 | 8_3:-25872828 | Msa1283990:CDS |
| GAGTTATGCTCTAATGGGGT+TGG | 0.521792 | 8_3:-25869511 | Msa1283990:three_prime_UTR |
| AGCAGAACTTCCATCAGCCT+TGG | 0.534921 | 8_3:+25869688 | None:intergenic |
| ACAATGATTCGGTTAAACAT+TGG | 0.540448 | 8_3:-25872817 | Msa1283990:CDS |
| ATATTGATACTCCAAATGGC+TGG | 0.546067 | 8_3:-25869628 | Msa1283990:CDS |
| GAACTTGGGATCAAATCACC+TGG | 0.553911 | 8_3:-25872941 | Msa1283990:CDS |
| TGATACTCCAAATGGCTGGA+TGG | 0.568648 | 8_3:-25869624 | Msa1283990:CDS |
| AACTTGGGATCAAATCACCT+GGG | 0.581574 | 8_3:-25872940 | Msa1283990:CDS |
| CATCATGCCAAGCTTCATGA+AGG | 0.583004 | 8_3:-25872854 | Msa1283990:CDS |
| GAAGTGCTTACCAAGGCTGA+TGG | 0.599893 | 8_3:-25869698 | Msa1283990:CDS |
| GGAAGCTTATCACTGAACTT+GGG | 0.615868 | 8_3:-25872955 | Msa1283990:CDS |
| TGAATATGAGAAGAACAATG+AGG | 0.650125 | 8_3:-25869651 | Msa1283990:CDS |
| TAAGGAGTTATGCTCTAATG+GGG | 0.662908 | 8_3:-25869515 | Msa1283990:three_prime_UTR |
| GGTACACACATGCAATGAGA+AGG | 0.678141 | 8_3:-25869810 | Msa1283990:CDS |
| GGACATAACAACAGACGGTG+AGG | 0.687195 | 8_3:-25869831 | Msa1283990:intron |
| CATCTTAGAAGTGCTTACCA+AGG | 0.696732 | 8_3:-25869705 | Msa1283990:CDS |
| ACTTGGGATCAAATCACCTG+GGG | 0.705917 | 8_3:-25872939 | Msa1283990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTTATAATATTTAAAA+AGG | - | chr8_3:25870227-25870246 | Msa1283990:intron | 0.0% |
| !! | TAATTTATAATATTTAAAAA+GGG | - | chr8_3:25870228-25870247 | Msa1283990:intron | 0.0% |
| !! | ATTATAAATTAAGTGATTAT+AGG | + | chr8_3:25871153-25871172 | None:intergenic | 10.0% |
| !! | AATAAAATCGATAAAATATT+TGG | - | chr8_3:25871405-25871424 | Msa1283990:intron | 10.0% |
| !! | ATAAAAAAAAGATATTGATA+AGG | + | chr8_3:25872267-25872286 | None:intergenic | 10.0% |
| !!! | CGTATTTAATATTTTTTTAA+AGG | - | chr8_3:25872566-25872585 | Msa1283990:intron | 10.0% |
| !!! | TTTTTATTTCTTTCCAAATA+TGG | - | chr8_3:25869471-25869490 | Msa1283990:three_prime_UTR | 15.0% |
| !! | ATGTTATTGTATAAATAATG+GGG | + | chr8_3:25869770-25869789 | None:intergenic | 15.0% |
| !! | GATGTTATTGTATAAATAAT+GGG | + | chr8_3:25869771-25869790 | None:intergenic | 15.0% |
| !! | TGATGTTATTGTATAAATAA+TGG | + | chr8_3:25869772-25869791 | None:intergenic | 15.0% |
| !! | TAGAAACACAATTATTATTA+GGG | + | chr8_3:25870113-25870132 | None:intergenic | 15.0% |
| !! | TTAGAAACACAATTATTATT+AGG | + | chr8_3:25870114-25870133 | None:intergenic | 15.0% |
| !!! | TTTAAAAAAACACTTTCTTT+TGG | + | chr8_3:25870880-25870899 | None:intergenic | 15.0% |
| !! | AATAATATAGATTAAGTTAG+TGG | + | chr8_3:25871774-25871793 | None:intergenic | 15.0% |
| !!! | TTAAATAGTCTTATACATTA+GGG | + | chr8_3:25872300-25872319 | None:intergenic | 15.0% |
| !!! | TTTAAATAGTCTTATACATT+AGG | + | chr8_3:25872301-25872320 | None:intergenic | 15.0% |
| !!! | TGTATATGGTTTTATTTTTA+AGG | + | chr8_3:25872337-25872356 | None:intergenic | 15.0% |
| !! | TTATGTCATAGGTAATAATA+AGG | - | chr8_3:25869666-25869685 | Msa1283990:CDS | 20.0% |
| !! | ATAATATTTAAAAAGGGAAG+AGG | - | chr8_3:25870234-25870253 | Msa1283990:intron | 20.0% |
| !! | TTAAACATAACTCTTCATTA+TGG | + | chr8_3:25870509-25870528 | None:intergenic | 20.0% |
| !!! | TGATTTTTTGGATGATTTTT+TGG | + | chr8_3:25870591-25870610 | None:intergenic | 20.0% |
| !!! | AACTAGTTTATTTTCTAGAT+AGG | + | chr8_3:25870644-25870663 | None:intergenic | 20.0% |
| !!! | AGGTAAACTCATTTTTTTTT+TGG | + | chr8_3:25871003-25871022 | None:intergenic | 20.0% |
| !! | ATGCTTGTTCAATAAAATTA+GGG | - | chr8_3:25871316-25871335 | Msa1283990:intron | 20.0% |
| !!! | TTATCGATTTTATTTCAGAT+TGG | + | chr8_3:25871399-25871418 | None:intergenic | 20.0% |
| !!! | TTTTGCAGTTTTCAATTTTT+TGG | - | chr8_3:25871430-25871449 | Msa1283990:intron | 20.0% |
| !!! | CAAAAATATTTGGTTTTTTG+CGG | + | chr8_3:25871581-25871600 | None:intergenic | 20.0% |
| !!! | TAATATTTACTTTTACGGTT+TGG | + | chr8_3:25871677-25871696 | None:intergenic | 20.0% |
| !!! | TTTGAAATAAAAATCACATG+TGG | + | chr8_3:25871912-25871931 | None:intergenic | 20.0% |
| !! | TGCATATAAGAATTTGTATA+TGG | + | chr8_3:25872351-25872370 | None:intergenic | 20.0% |
| !! | AAATTAGTTGTACTAGAAAT+GGG | + | chr8_3:25872397-25872416 | None:intergenic | 20.0% |
| !!! | TATTAAATACGTTTTCTCAA+AGG | + | chr8_3:25872557-25872576 | None:intergenic | 20.0% |
| ! | GAGAAGAAAGAAACAAATAT+GGG | + | chr8_3:25869425-25869444 | None:intergenic | 25.0% |
| ! | AGAGAAGAAAGAAACAAATA+TGG | + | chr8_3:25869426-25869445 | None:intergenic | 25.0% |
| ! | TAATAATGTTTGCAACATCT+TGG | + | chr8_3:25869976-25869995 | None:intergenic | 25.0% |
| !! | TTTACGATTCGATTTTACAT+AGG | + | chr8_3:25870340-25870359 | None:intergenic | 25.0% |
| !!! | TTTTTGGATGATTTTTTGGA+TGG | + | chr8_3:25870587-25870606 | None:intergenic | 25.0% |
| !!! | AACTTGTGAACTTGATTTTT+TGG | + | chr8_3:25870603-25870622 | None:intergenic | 25.0% |
| !!! | GACATTAATTTTAGTACCTT+GGG | - | chr8_3:25870805-25870824 | Msa1283990:intron | 25.0% |
| !!! | TTCTTTTGGACCATTTTTTT+GGG | + | chr8_3:25870866-25870885 | None:intergenic | 25.0% |
| !!! | TTTCTTTTGGACCATTTTTT+TGG | + | chr8_3:25870867-25870886 | None:intergenic | 25.0% |
| ! | GATACTTAAAAACGTAAACT+CGG | - | chr8_3:25871041-25871060 | Msa1283990:intron | 25.0% |
| ! | ATAATATTTAGAAAAGGGAG+AGG | - | chr8_3:25871168-25871187 | Msa1283990:intron | 25.0% |
| !!! | GAGAGGTATATAATTTTACA+AGG | - | chr8_3:25871185-25871204 | Msa1283990:intron | 25.0% |
| ! | AAACAATAAAACTACCAAAC+CGG | + | chr8_3:25871263-25871282 | None:intergenic | 25.0% |
| ! | CATGCTTGTTCAATAAAATT+AGG | - | chr8_3:25871315-25871334 | Msa1283990:intron | 25.0% |
| !! | TTTTGCGGTTTTCAATTTTT+TGG | + | chr8_3:25871566-25871585 | None:intergenic | 25.0% |
| !! | CGCAAAAAACCAAATATTTT+TGG | - | chr8_3:25871579-25871598 | Msa1283990:intron | 25.0% |
| ! | CAAACACATCCAAAAATATT+TGG | + | chr8_3:25871591-25871610 | None:intergenic | 25.0% |
| !!! | CAAATATTTTTGGATGTGTT+TGG | - | chr8_3:25871589-25871608 | Msa1283990:intron | 25.0% |
| !! | TGACTATTCTGAAAAATAGT+CGG | + | chr8_3:25871873-25871892 | None:intergenic | 25.0% |
| ! | AAACTATTCAAACTCAACTA+GGG | + | chr8_3:25871977-25871996 | None:intergenic | 25.0% |
| !! | AGTGTGATTTTATAACTTCA+AGG | + | chr8_3:25872093-25872112 | None:intergenic | 25.0% |
| ! | CAAATTAGTTGTACTAGAAA+TGG | + | chr8_3:25872398-25872417 | None:intergenic | 25.0% |
| ! | TGGAGATATTGAAAACTATA+AGG | - | chr8_3:25872720-25872739 | Msa1283990:intron | 25.0% |
| !! | TGGGAAGTTTTATGATATGA+TGG | + | chr8_3:25869406-25869425 | None:intergenic | 30.0% |
| !! | ACAATGATTCGGTTAAACAT+TGG | - | chr8_3:25869641-25869660 | Msa1283990:CDS | 30.0% |
| AAACATTGGACTTATGTCAT+AGG | - | chr8_3:25869655-25869674 | Msa1283990:CDS | 30.0% | |
| !!! | AGTCATGAGAATGACTTTTT+TGG | - | chr8_3:25869704-25869723 | Msa1283990:CDS | 30.0% |
| TTATTATTAGGGAGCTTCTA+CGG | + | chr8_3:25870102-25870121 | None:intergenic | 30.0% | |
| TACATAGGTAAAACAAGTTG+AGG | + | chr8_3:25870325-25870344 | None:intergenic | 30.0% | |
| AACATAACTCTTCATTATGG+TGG | + | chr8_3:25870506-25870525 | None:intergenic | 30.0% | |
| CAACATTAGAACCAAATACA+TGG | - | chr8_3:25870768-25870787 | Msa1283990:intron | 30.0% | |
| !! | CGACATTAATTTTAGTACCT+TGG | - | chr8_3:25870804-25870823 | Msa1283990:intron | 30.0% |
| !!! | CAATTCTTTTTTTAAGCCCA+AGG | + | chr8_3:25870824-25870843 | None:intergenic | 30.0% |
| AGAAAATCGACCCAAAAAAA+TGG | - | chr8_3:25870853-25870872 | Msa1283990:intron | 30.0% | |
| TAAACGTATACTCGTAAACA+CGG | - | chr8_3:25870896-25870915 | Msa1283990:intron | 30.0% | |
| ! | GTAGAGAAGCACAAAATATA+TGG | + | chr8_3:25871237-25871256 | None:intergenic | 30.0% |
| CTAGTTAACAAGGTGAAATT+GGG | + | chr8_3:25871293-25871312 | None:intergenic | 30.0% | |
| !! | GGAACGATTTTATTTCAGAT+TGG | + | chr8_3:25871545-25871564 | None:intergenic | 30.0% |
| !! | GTTGTTTTGTAAAAACCGTT+AGG | - | chr8_3:25871614-25871633 | Msa1283990:intron | 30.0% |
| !!! | TTTACTTTTACGGTTTGGTT+CGG | + | chr8_3:25871672-25871691 | None:intergenic | 30.0% |
| ! | TGCGTTATTATGTTACTTGT+TGG | - | chr8_3:25871730-25871749 | Msa1283990:intron | 30.0% |
| GAAACTATTCAAACTCAACT+AGG | + | chr8_3:25871978-25871997 | None:intergenic | 30.0% | |
| !! | TATTTTTGTGTCAAGATGTG+AGG | + | chr8_3:25872163-25872182 | None:intergenic | 30.0% |
| TGTACTAGAAATGGGTATAT+TGG | + | chr8_3:25872389-25872408 | None:intergenic | 30.0% | |
| ! | CTAGTACAACTAATTTGTCT+TGG | - | chr8_3:25872401-25872420 | Msa1283990:intron | 30.0% |
| !!! | TACCGAGGTAGTAATTTTTT+TGG | - | chr8_3:25872511-25872530 | Msa1283990:intron | 30.0% |
| CACCAAAAAAATTACTACCT+CGG | + | chr8_3:25872516-25872535 | None:intergenic | 30.0% | |
| GCTATTGATATTAATTGCCT+CGG | - | chr8_3:25872606-25872625 | Msa1283990:intron | 30.0% | |
| TGAATATGAGAAGAACAATG+AGG | - | chr8_3:25872807-25872826 | Msa1283990:CDS | 30.0% | |
| !! | AAAAGCACTAGAGATATTGA+TGG | - | chr8_3:25872868-25872887 | Msa1283990:CDS | 30.0% |
| !! | TATTGATGGTCATCTTTTCA+AGG | - | chr8_3:25872882-25872901 | Msa1283990:CDS | 30.0% |
| !! | ATTGATGGTCATCTTTTCAA+GGG | - | chr8_3:25872883-25872902 | Msa1283990:CDS | 30.0% |
| GTGATCAAGTCATTTGAATA+AGG | - | chr8_3:25872925-25872944 | Msa1283990:CDS | 30.0% | |
| AATAAGGAGTTATGCTCTAA+TGG | - | chr8_3:25872941-25872960 | Msa1283990:CDS | 30.0% | |
| ATAAGGAGTTATGCTCTAAT+GGG | - | chr8_3:25872942-25872961 | Msa1283990:CDS | 30.0% | |
| CTAGTGTGATGTTTGTATAA+TGG | - | chr8_3:25873039-25873058 | Msa1283990:five_prime_UTR | 30.0% | |
| AGATTGGCATCACAATGATT+CGG | - | chr8_3:25869630-25869649 | Msa1283990:CDS | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | + | chr8_3:25869884-25869903 | None:intergenic | 35.0% | |
| CCTTAAGTGTTACACTTTGT+GGG | + | chr8_3:25869885-25869904 | None:intergenic | 35.0% | |
| GTTGAAAACACTTTATCGTC+TGG | + | chr8_3:25870752-25870771 | None:intergenic | 35.0% | |
| GAGTTAACACGTGTTAAACT+CGG | + | chr8_3:25870951-25870970 | None:intergenic | 35.0% | |
| GAGTTTAACACGTGTTAACT+CGG | - | chr8_3:25870950-25870969 | Msa1283990:intron | 35.0% | |
| TCAAAAACGTGTTAACTCGA+AGG | + | chr8_3:25871023-25871042 | None:intergenic | 35.0% | |
| ! | ACGAGTTAACACTTGATTTG+TGG | - | chr8_3:25871072-25871091 | Msa1283990:intron | 35.0% |
| !! | ACACTTGATTTGTGGAAAAC+TGG | - | chr8_3:25871080-25871099 | Msa1283990:intron | 35.0% |
| !! | TTATAGGTTCTAAACCCAGA+GGG | + | chr8_3:25871137-25871156 | None:intergenic | 35.0% |
| !! | ATTATAGGTTCTAAACCCAG+AGG | + | chr8_3:25871138-25871157 | None:intergenic | 35.0% |
| AATAAAACTACCAAACCGGA+TGG | + | chr8_3:25871259-25871278 | None:intergenic | 35.0% | |
| CCTAGTTAACAAGGTGAAAT+TGG | + | chr8_3:25871294-25871313 | None:intergenic | 35.0% | |
| CCAATTTCACCTTGTTAACT+AGG | - | chr8_3:25871291-25871310 | Msa1283990:intron | 35.0% | |
| ! | GTTAACATGGGTTGAGTTTA+GGG | + | chr8_3:25871492-25871511 | None:intergenic | 35.0% |
| ! | TAACAAGCATGGGTTAACAT+GGG | + | chr8_3:25871504-25871523 | None:intergenic | 35.0% |
| ! | ATGTTAACCCATGCTTGTTA+GGG | - | chr8_3:25871504-25871523 | Msa1283990:intron | 35.0% |
| GAAATTCGATCAGATCCTAA+CGG | + | chr8_3:25871632-25871651 | None:intergenic | 35.0% | |
| AAATCACATGTGGTTCAGTT+CGG | + | chr8_3:25871902-25871921 | None:intergenic | 35.0% | |
| ! | TCGGTAACTTTTTACAAGAG+TGG | + | chr8_3:25872497-25872516 | None:intergenic | 35.0% |
| ACTCTTGTAAAAAGTTACCG+AGG | - | chr8_3:25872496-25872515 | Msa1283990:intron | 35.0% | |
| AAGATCACTTACAAGCTGTT+TGG | - | chr8_3:25872697-25872716 | Msa1283990:intron | 35.0% | |
| GAGGATATTGATACTCCAAA+TGG | - | chr8_3:25872826-25872845 | Msa1283990:CDS | 35.0% | |
| ATATTGATACTCCAAATGGC+TGG | - | chr8_3:25872830-25872849 | Msa1283990:CDS | 35.0% | |
| ! | TATCTCTAGTGCTTTTGCTA+AGG | + | chr8_3:25872864-25872883 | None:intergenic | 35.0% |
| !! | TTGATGGTCATCTTTTCAAG+GGG | - | chr8_3:25872884-25872903 | Msa1283990:CDS | 35.0% |
| TAAGGAGTTATGCTCTAATG+GGG | - | chr8_3:25872943-25872962 | Msa1283990:CDS | 35.0% | |
| GGAAGCTTATCACTGAACTT+GGG | - | chr8_3:25869503-25869522 | Msa1283990:three_prime_UTR | 40.0% | |
| AACTTGGGATCAAATCACCT+GGG | - | chr8_3:25869518-25869537 | Msa1283990:three_prime_UTR | 40.0% | |
| AGTTTGAAAAACTTCTCCCC+AGG | + | chr8_3:25869538-25869557 | None:intergenic | 40.0% | |
| ATCTTCACCTTCATGAAGCT+TGG | + | chr8_3:25869614-25869633 | None:intergenic | 40.0% | |
| AGCTTCATGAAGGTGAAGAT+TGG | - | chr8_3:25869614-25869633 | Msa1283990:CDS | 40.0% | |
| CCCACAAAGTGTAACACTTA+AGG | - | chr8_3:25869882-25869901 | Msa1283990:intron | 40.0% | |
| GCCTTAAGTGTTACACTTTG+TGG | + | chr8_3:25869886-25869905 | None:intergenic | 40.0% | |
| TTGCAACATCTTGGACTTAC+AGG | + | chr8_3:25869967-25869986 | None:intergenic | 40.0% | |
| CACTAGAGAAGACCACATTA+TGG | - | chr8_3:25870265-25870284 | Msa1283990:intron | 40.0% | |
| CGAGTTGTAAAACCTTGCTT+GGG | + | chr8_3:25870294-25870313 | None:intergenic | 40.0% | |
| ! | TCGAGTTGTAAAACCTTGCT+TGG | + | chr8_3:25870295-25870314 | None:intergenic | 40.0% |
| GTGAGTTCAAGCCATGTATT+TGG | + | chr8_3:25870782-25870801 | None:intergenic | 40.0% | |
| TCGGTAAACTCGTGTAAACT+CGG | + | chr8_3:25870932-25870951 | None:intergenic | 40.0% | |
| !! | GACTCGGATGGATTAAACTT+GGG | + | chr8_3:25871107-25871126 | None:intergenic | 40.0% |
| !! | TGACTCGGATGGATTAAACT+TGG | + | chr8_3:25871108-25871127 | None:intergenic | 40.0% |
| ! | TTTTGTGCTTCTCTACCATC+CGG | - | chr8_3:25871241-25871260 | Msa1283990:intron | 40.0% |
| CAAGCATGTCCTAGTTAACA+AGG | + | chr8_3:25871303-25871322 | None:intergenic | 40.0% | |
| ! | GGTTAACATGGGTTGAGTTT+AGG | + | chr8_3:25871493-25871512 | None:intergenic | 40.0% |
| ! | CTAACAAGCATGGGTTAACA+TGG | + | chr8_3:25871505-25871524 | None:intergenic | 40.0% |
| CATGTTAACCCATGCTTGTT+AGG | - | chr8_3:25871503-25871522 | Msa1283990:intron | 40.0% | |
| TGAACATCCCTAACAAGCAT+GGG | + | chr8_3:25871514-25871533 | None:intergenic | 40.0% | |
| TTGAACATCCCTAACAAGCA+TGG | + | chr8_3:25871515-25871534 | None:intergenic | 40.0% | |
| ATCACTTACAAGCTGTTTGG+TGG | - | chr8_3:25872700-25872719 | Msa1283990:intron | 40.0% | |
| !! | CATCTTAGAAGTGCTTACCA+AGG | - | chr8_3:25872753-25872772 | Msa1283990:intron | 40.0% |
| ATGGAAGTTCTGCTGTTAGA+TGG | - | chr8_3:25872779-25872798 | Msa1283990:intron | 40.0% | |
| !! | TGATGGTCATCTTTTCAAGG+GGG | - | chr8_3:25872885-25872904 | Msa1283990:CDS | 40.0% |
| !! | TCATCTTTTCAAGGGGGAAA+AGG | - | chr8_3:25872891-25872910 | Msa1283990:CDS | 40.0% |
| !!! | TCTAATGGGGTTGGCTTTTA+TGG | - | chr8_3:25872956-25872975 | Msa1283990:CDS | 40.0% |
| TTTCCAAATATGGTGCTCGC+TGG | - | chr8_3:25869481-25869500 | Msa1283990:three_prime_UTR | 45.0% | |
| TTCCAAATATGGTGCTCGCT+GGG | - | chr8_3:25869482-25869501 | Msa1283990:three_prime_UTR | 45.0% | |
| GGGAAGCTTATCACTGAACT+TGG | - | chr8_3:25869502-25869521 | Msa1283990:three_prime_UTR | 45.0% | |
| GAACTTGGGATCAAATCACC+TGG | - | chr8_3:25869517-25869536 | Msa1283990:three_prime_UTR | 45.0% | |
| ACTTGGGATCAAATCACCTG+GGG | - | chr8_3:25869519-25869538 | Msa1283990:three_prime_UTR | 45.0% | |
| CACAAACTTTGTGCACTTCG+TGG | + | chr8_3:25869576-25869595 | None:intergenic | 45.0% | |
| CATCATGCCAAGCTTCATGA+AGG | - | chr8_3:25869604-25869623 | Msa1283990:CDS | 45.0% | |
| ! | GGGGTGTTACGCTTATAACA+AGG | + | chr8_3:25869865-25869884 | None:intergenic | 45.0% |
| TTGCTTGGGACTCCATAATG+TGG | + | chr8_3:25870280-25870299 | None:intergenic | 45.0% | |
| ACATTATGGAGTCCCAAGCA+AGG | - | chr8_3:25870279-25870298 | Msa1283990:intron | 45.0% | |
| CGGTAAACTCGTGTAAACTC+GGG | + | chr8_3:25870931-25870950 | None:intergenic | 45.0% | |
| ACATGTGGTTCAGTTCGGTT+TGG | + | chr8_3:25871897-25871916 | None:intergenic | 45.0% | |
| GGTACACACATGCAATGAGA+AGG | - | chr8_3:25872648-25872667 | Msa1283990:intron | 45.0% | |
| TGATACTCCAAATGGCTGGA+TGG | - | chr8_3:25872834-25872853 | Msa1283990:CDS | 45.0% | |
| GAGTTATGCTCTAATGGGGT+TGG | - | chr8_3:25872947-25872966 | Msa1283990:CDS | 45.0% | |
| !!! | TTTTATATAATTTTACTTTT+AGG | + | chr8_3:25870390-25870409 | None:intergenic | 5.0% |
| !! | TAATTTATAATATTTAGAAA+AGG | - | chr8_3:25871162-25871181 | Msa1283990:intron | 5.0% |
| !! | AATTTATAATATTTAGAAAA+GGG | - | chr8_3:25871163-25871182 | Msa1283990:intron | 5.0% |
| !!! | ATAAAAAATTTATTTTAGAT+TGG | + | chr8_3:25871357-25871376 | None:intergenic | 5.0% |
| !!! | ATTATTAATATTTACTTTTA+CGG | + | chr8_3:25871682-25871701 | None:intergenic | 5.0% |
| TTCCCAGCGAGCACCATATT+TGG | + | chr8_3:25869487-25869506 | None:intergenic | 50.0% | |
| TGCTTCTCTACCATCCGGTT+TGG | - | chr8_3:25871246-25871265 | Msa1283990:intron | 50.0% | |
| ! | CAACTAGGGTGTTCGCGATT+TGG | + | chr8_3:25871963-25871982 | None:intergenic | 50.0% |
| GCCTCGGACATAACAACAGA+CGG | - | chr8_3:25872622-25872641 | Msa1283990:intron | 50.0% | |
| ACCGTCTGTTGTTATGTCCG+AGG | + | chr8_3:25872626-25872645 | None:intergenic | 50.0% | |
| GGACATAACAACAGACGGTG+AGG | - | chr8_3:25872627-25872646 | Msa1283990:intron | 50.0% | |
| ! | GAAGTGCTTACCAAGGCTGA+TGG | - | chr8_3:25872760-25872779 | Msa1283990:intron | 50.0% |
| AGCAGAACTTCCATCAGCCT+TGG | + | chr8_3:25872773-25872792 | None:intergenic | 50.0% | |
| AGGTAGTCCATCCAGCCATT+TGG | + | chr8_3:25872844-25872863 | None:intergenic | 50.0% | |
| !! | GAGGGTTTGTCTGACTCGGA+TGG | + | chr8_3:25871119-25871138 | None:intergenic | 55.0% |
| TCCGAGTCAGACAAACCCTC+TGG | - | chr8_3:25871119-25871138 | Msa1283990:intron | 55.0% | |
| CCCAGAGGGTTTGTCTGACT+CGG | + | chr8_3:25871123-25871142 | None:intergenic | 55.0% | |
| CCGAGTCAGACAAACCCTCT+GGG | - | chr8_3:25871120-25871139 | Msa1283990:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 25869390 | 25873090 | 25869390 | ID=Msa1283990;Name=Msa1283990 |
| chr8_3 | mRNA | 25869390 | 25873090 | 25869390 | ID=Msa1283990-mRNA-1;Parent=Msa1283990;Name=Msa1283990-mRNA-1;_AED=0.01;_eAED=0.01;_QI=100|1|1|1|1|1|2|166|156 |
| chr8_3 | exon | 25869390 | 25869839 | 25869390 | ID=Msa1283990-mRNA-1:exon:9066;Parent=Msa1283990-mRNA-1 |
| chr8_3 | exon | 25872804 | 25873090 | 25872804 | ID=Msa1283990-mRNA-1:exon:9065;Parent=Msa1283990-mRNA-1 |
| chr8_3 | five_prime_UTR | 25872991 | 25873090 | 25872991 | ID=Msa1283990-mRNA-1:five_prime_utr;Parent=Msa1283990-mRNA-1 |
| chr8_3 | CDS | 25872804 | 25872990 | 25872804 | ID=Msa1283990-mRNA-1:cds;Parent=Msa1283990-mRNA-1 |
| chr8_3 | CDS | 25869556 | 25869839 | 25869556 | ID=Msa1283990-mRNA-1:cds;Parent=Msa1283990-mRNA-1 |
| chr8_3 | three_prime_UTR | 25869390 | 25869555 | 25869390 | ID=Msa1283990-mRNA-1:three_prime_utr;Parent=Msa1283990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
