AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0411170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0411170 MtrunA17_Chr3g0102321 89.711 311 31 1 1 311 1 310 0.0 506
Msa0411170 MtrunA17_Chr5g0446471 38.129 139 71 3 40 178 36 159 2.09e-18 83.2
Msa0411170 MtrunA17_Chr5g0446471 63.333 60 14 2 250 309 189 240 4.61e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 53 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATACTTCAGATTGAATT+AGG 0.217620 3_2:+53317328 Msa0411170:three_prime_UTR
GAGACTTTGTTGATTGAAAA+TGG 0.223638 3_2:-53317222 None:intergenic
CAACATAAAACTTGTAAATA+AGG 0.279905 3_2:-53317395 None:intergenic
AATTAGGAGTTGTCACATTT+AGG 0.282177 3_2:+53317344 Msa0411170:three_prime_UTR
GATACAAATCATAACCTAAA+TGG 0.283577 3_2:+53316921 Msa0411170:CDS
AGCTTGCTCCTTATGATTCT+CGG 0.296122 3_2:-53316598 None:intergenic
CAATCTGAAGTATTAACTAT+TGG 0.350015 3_2:-53317321 None:intergenic
AGGAAATCAATGTGTTGATA+AGG 0.357223 3_2:+53317364 Msa0411170:three_prime_UTR
TAATTGAGATTGATATTTCC+AGG 0.365048 3_2:+53317291 Msa0411170:CDS
ATGGATTCTGAAATGAAATC+TGG 0.372382 3_2:-53317203 None:intergenic
ACTTAAATTTGAATTCAGAT+TGG 0.426941 3_2:-53316337 None:intergenic
AATCTTGCTCAAGTTTAAGA+TGG 0.436917 3_2:-53317429 None:intergenic
ATTCTTCAGTTAAGTTAGAC+AGG 0.438891 3_2:-53317157 None:intergenic
AAGAATTGTGTACCAGAGAT+AGG 0.442240 3_2:-53316984 None:intergenic
CCTTTGATCTATCCTATCTC+TGG 0.442686 3_2:+53316972 Msa0411170:CDS
GTTAGAATATTCATTTCCAT+TGG 0.449339 3_2:+53316629 Msa0411170:CDS
AAAGTGGATACAAGAGCAAT+TGG 0.452836 3_2:-53316444 None:intergenic
AAAACTTGAGTAGTCATGAT+AGG 0.459860 3_2:+53316820 Msa0411170:CDS
TTGCTTCTTTCACTATCTGA+TGG 0.475800 3_2:-53316750 None:intergenic
GGATTTAATAACTGAGCATA+AGG 0.487445 3_2:+53316131 Msa0411170:five_prime_UTR
TCTGAAGTATTAACTATTGG+TGG 0.490104 3_2:-53317318 None:intergenic
TAAGATGGTACTCACTTCAC+AGG 0.491637 3_2:+53316109 Msa0411170:five_prime_UTR
CAAGTCAATGATCATGATGA+AGG 0.495173 3_2:+53316293 Msa0411170:exon
TTAACTATTGGTGGATCACC+TGG 0.499764 3_2:-53317309 None:intergenic
TGTTCAAGAAAAGTTGATGA+AGG 0.507893 3_2:+53316515 Msa0411170:CDS
TAGACAGGTTCCTGCTTGGA+AGG 0.517226 3_2:-53317142 None:intergenic
TGAAAATGCCGAGAATCATA+AGG 0.517745 3_2:+53316590 Msa0411170:CDS
TTTCTGCTTTCACAATCCAA+TGG 0.538507 3_2:-53316645 None:intergenic
TCATCTTGCTGCATATGCTC+AGG 0.539256 3_2:-53316705 None:intergenic
TTGTGAAAGCAGAAATCTCT+TGG 0.553992 3_2:+53316653 Msa0411170:CDS
TCGAAATCCACCTTCCAAGC+AGG 0.554573 3_2:+53317132 Msa0411170:CDS
CAATGATTATGACGATTATG+AGG 0.554659 3_2:+53317079 Msa0411170:CDS
ACAGGTTCCTGCTTGGAAGG+TGG 0.556120 3_2:-53317139 None:intergenic
GTATCACTAACATCTAATGA+TGG 0.563606 3_2:-53316549 None:intergenic
AAAATGTCAAGATAATAGAC+AGG 0.564173 3_2:-53317457 None:intergenic
AAATGTGACAATAAACAAAG+TGG 0.564759 3_2:-53316460 None:intergenic
AAGCAGAAATCTCTTGGTCG+TGG 0.571550 3_2:+53316659 Msa0411170:CDS
TTTAGTTGTGCATCAATCTG+TGG 0.579605 3_2:+53316245 Msa0411170:five_prime_UTR
TAACTGAGCATAAGGACAGA+AGG 0.581232 3_2:+53316139 Msa0411170:five_prime_UTR
GACTATGATAATCACAGTGA+AGG 0.587855 3_2:+53316879 Msa0411170:CDS
AAGTTAGACAGGTTCCTGCT+TGG 0.595503 3_2:-53317146 None:intergenic
TTATGACGATTATGAGGTGG+AGG 0.600863 3_2:+53317085 Msa0411170:CDS
CCAGAGATAGGATAGATCAA+AGG 0.603822 3_2:-53316972 None:intergenic
AGAAGCAATGGCTCAATCGT+CGG 0.613511 3_2:+53316765 Msa0411170:CDS
AGAAATGAATGATATGAATG+AGG 0.616633 3_2:+53317259 Msa0411170:CDS
AACCTAAATGGAAAAGAGAG+TGG 0.625108 3_2:+53316933 Msa0411170:CDS
TCAGATAGTGAAAGAAGCAA+TGG 0.628062 3_2:+53316753 Msa0411170:CDS
AAGATGGTACTCACTTCACA+GGG 0.646341 3_2:+53316110 Msa0411170:five_prime_UTR
TGATTATGACGATTATGAGG+TGG 0.661398 3_2:+53317082 Msa0411170:CDS
TGAGGTGGAGGACGACGACG+AGG 0.677291 3_2:+53317097 Msa0411170:CDS
GGTGGAGGACGACGACGAGG+AGG 0.690311 3_2:+53317100 Msa0411170:CDS
AGAATGCTGATAAACACCAA+AGG 0.692849 3_2:-53316217 None:intergenic
TCTGACACTGATGATGAAGA+CGG 0.726031 3_2:+53316849 Msa0411170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAAAAAAAAAATATGT+TGG + chr3_2:53316059-53316078 Msa0411170:five_prime_UTR 10.0%
!! CAAAAAAAAAAAAAATATGT+TGG + chr3_2:53316059-53316078 Msa0411170:five_prime_UTR 10.0%
!! AATTGAAAAGAAAAATGAAA+AGG - chr3_2:53316394-53316413 None:intergenic 15.0%
!!! TTATTTACAAGTTTTATGTT+GGG + chr3_2:53317397-53317416 Msa0411170:three_prime_UTR 15.0%
!! AATTGAAAAGAAAAATGAAA+AGG - chr3_2:53316394-53316413 None:intergenic 15.0%
!!! TTATTTACAAGTTTTATGTT+GGG + chr3_2:53317397-53317416 Msa0411170:three_prime_UTR 15.0%
!!! TTTTGCTTAAAAGGTTATTA+TGG + chr3_2:53316177-53316196 Msa0411170:five_prime_UTR 20.0%
!! ACTTAAATTTGAATTCAGAT+TGG - chr3_2:53316340-53316359 None:intergenic 20.0%
!! GTCACATTTAAAAAGAAAAA+AGG + chr3_2:53316474-53316493 Msa0411170:CDS 20.0%
!! TTAATACTTCAGATTGAATT+AGG + chr3_2:53317328-53317347 Msa0411170:three_prime_UTR 20.0%
!! CAACATAAAACTTGTAAATA+AGG - chr3_2:53317398-53317417 None:intergenic 20.0%
!!! CTTATTTACAAGTTTTATGT+TGG + chr3_2:53317396-53317415 Msa0411170:three_prime_UTR 20.0%
!!! TTTTGCTTAAAAGGTTATTA+TGG + chr3_2:53316177-53316196 Msa0411170:five_prime_UTR 20.0%
!! ACTTAAATTTGAATTCAGAT+TGG - chr3_2:53316340-53316359 None:intergenic 20.0%
!! GTCACATTTAAAAAGAAAAA+AGG + chr3_2:53316474-53316493 Msa0411170:CDS 20.0%
!! TTAATACTTCAGATTGAATT+AGG + chr3_2:53317328-53317347 Msa0411170:three_prime_UTR 20.0%
!! CAACATAAAACTTGTAAATA+AGG - chr3_2:53317398-53317417 None:intergenic 20.0%
!!! CTTATTTACAAGTTTTATGT+TGG + chr3_2:53317396-53317415 Msa0411170:three_prime_UTR 20.0%
!!! GCAATTTCAAGATTTTAAGA+TGG + chr3_2:53316094-53316113 Msa0411170:five_prime_UTR 25.0%
!!! TTTGCAGTTTTTTGCTTAAA+AGG + chr3_2:53316168-53316187 Msa0411170:five_prime_UTR 25.0%
! AAATGTGACAATAAACAAAG+TGG - chr3_2:53316463-53316482 None:intergenic 25.0%
! GTTAGAATATTCATTTCCAT+TGG + chr3_2:53316629-53316648 Msa0411170:CDS 25.0%
! GATACAAATCATAACCTAAA+TGG + chr3_2:53316921-53316940 Msa0411170:CDS 25.0%
! TGAAGAATCTATGCAAAAAT+TGG + chr3_2:53317172-53317191 Msa0411170:CDS 25.0%
! AGAAATGAATGATATGAATG+AGG + chr3_2:53317259-53317278 Msa0411170:CDS 25.0%
! TAATTGAGATTGATATTTCC+AGG + chr3_2:53317291-53317310 Msa0411170:CDS 25.0%
!! CAATCTGAAGTATTAACTAT+TGG - chr3_2:53317324-53317343 None:intergenic 25.0%
! AAAATGTCAAGATAATAGAC+AGG - chr3_2:53317460-53317479 None:intergenic 25.0%
!!! CTTGACATTTTGATTCAAAA+AGG + chr3_2:53317469-53317488 Msa0411170:three_prime_UTR 25.0%
!!! GCAATTTCAAGATTTTAAGA+TGG + chr3_2:53316094-53316113 Msa0411170:five_prime_UTR 25.0%
!!! TTTGCAGTTTTTTGCTTAAA+AGG + chr3_2:53316168-53316187 Msa0411170:five_prime_UTR 25.0%
! AAATGTGACAATAAACAAAG+TGG - chr3_2:53316463-53316482 None:intergenic 25.0%
! GTTAGAATATTCATTTCCAT+TGG + chr3_2:53316629-53316648 Msa0411170:CDS 25.0%
! GATACAAATCATAACCTAAA+TGG + chr3_2:53316921-53316940 Msa0411170:CDS 25.0%
! TGAAGAATCTATGCAAAAAT+TGG + chr3_2:53317172-53317191 Msa0411170:CDS 25.0%
! AGAAATGAATGATATGAATG+AGG + chr3_2:53317259-53317278 Msa0411170:CDS 25.0%
! TAATTGAGATTGATATTTCC+AGG + chr3_2:53317291-53317310 Msa0411170:CDS 25.0%
!! CAATCTGAAGTATTAACTAT+TGG - chr3_2:53317324-53317343 None:intergenic 25.0%
! AAAATGTCAAGATAATAGAC+AGG - chr3_2:53317460-53317479 None:intergenic 25.0%
!!! CTTGACATTTTGATTCAAAA+AGG + chr3_2:53317469-53317488 Msa0411170:three_prime_UTR 25.0%
GGATTTAATAACTGAGCATA+AGG + chr3_2:53316131-53316150 Msa0411170:five_prime_UTR 30.0%
!! TGTTCAAGAAAAGTTGATGA+AGG + chr3_2:53316515-53316534 Msa0411170:CDS 30.0%
GTATCACTAACATCTAATGA+TGG - chr3_2:53316552-53316571 None:intergenic 30.0%
AAAACTTGAGTAGTCATGAT+AGG + chr3_2:53316820-53316839 Msa0411170:CDS 30.0%
TCATAATCATTGTCATCTGA+AGG - chr3_2:53317071-53317090 None:intergenic 30.0%
CAATGATTATGACGATTATG+AGG + chr3_2:53317079-53317098 Msa0411170:CDS 30.0%
ATTCTTCAGTTAAGTTAGAC+AGG - chr3_2:53317160-53317179 None:intergenic 30.0%
!! ATGGATTCTGAAATGAAATC+TGG - chr3_2:53317206-53317225 None:intergenic 30.0%
! GAGACTTTGTTGATTGAAAA+TGG - chr3_2:53317225-53317244 None:intergenic 30.0%
! TCTGAAGTATTAACTATTGG+TGG - chr3_2:53317321-53317340 None:intergenic 30.0%
AATTAGGAGTTGTCACATTT+AGG + chr3_2:53317344-53317363 Msa0411170:three_prime_UTR 30.0%
! AGGAAATCAATGTGTTGATA+AGG + chr3_2:53317364-53317383 Msa0411170:three_prime_UTR 30.0%
AATCTTGCTCAAGTTTAAGA+TGG - chr3_2:53317432-53317451 None:intergenic 30.0%
GGATTTAATAACTGAGCATA+AGG + chr3_2:53316131-53316150 Msa0411170:five_prime_UTR 30.0%
!! TGTTCAAGAAAAGTTGATGA+AGG + chr3_2:53316515-53316534 Msa0411170:CDS 30.0%
GTATCACTAACATCTAATGA+TGG - chr3_2:53316552-53316571 None:intergenic 30.0%
AAAACTTGAGTAGTCATGAT+AGG + chr3_2:53316820-53316839 Msa0411170:CDS 30.0%
TCATAATCATTGTCATCTGA+AGG - chr3_2:53317071-53317090 None:intergenic 30.0%
CAATGATTATGACGATTATG+AGG + chr3_2:53317079-53317098 Msa0411170:CDS 30.0%
ATTCTTCAGTTAAGTTAGAC+AGG - chr3_2:53317160-53317179 None:intergenic 30.0%
!! ATGGATTCTGAAATGAAATC+TGG - chr3_2:53317206-53317225 None:intergenic 30.0%
! GAGACTTTGTTGATTGAAAA+TGG - chr3_2:53317225-53317244 None:intergenic 30.0%
! TCTGAAGTATTAACTATTGG+TGG - chr3_2:53317321-53317340 None:intergenic 30.0%
AATTAGGAGTTGTCACATTT+AGG + chr3_2:53317344-53317363 Msa0411170:three_prime_UTR 30.0%
! AGGAAATCAATGTGTTGATA+AGG + chr3_2:53317364-53317383 Msa0411170:three_prime_UTR 30.0%
AATCTTGCTCAAGTTTAAGA+TGG - chr3_2:53317432-53317451 None:intergenic 30.0%
AGAATGCTGATAAACACCAA+AGG - chr3_2:53316220-53316239 None:intergenic 35.0%
TTTAGTTGTGCATCAATCTG+TGG + chr3_2:53316245-53316264 Msa0411170:five_prime_UTR 35.0%
CAAGTCAATGATCATGATGA+AGG + chr3_2:53316293-53316312 Msa0411170:exon 35.0%
AAAGTGGATACAAGAGCAAT+TGG - chr3_2:53316447-53316466 None:intergenic 35.0%
TGAAAATGCCGAGAATCATA+AGG + chr3_2:53316590-53316609 Msa0411170:CDS 35.0%
TTTCTGCTTTCACAATCCAA+TGG - chr3_2:53316648-53316667 None:intergenic 35.0%
TTGTGAAAGCAGAAATCTCT+TGG + chr3_2:53316653-53316672 Msa0411170:CDS 35.0%
TTGCTTCTTTCACTATCTGA+TGG - chr3_2:53316753-53316772 None:intergenic 35.0%
TCAGATAGTGAAAGAAGCAA+TGG + chr3_2:53316753-53316772 Msa0411170:CDS 35.0%
GACTATGATAATCACAGTGA+AGG + chr3_2:53316879-53316898 Msa0411170:CDS 35.0%
AACCTAAATGGAAAAGAGAG+TGG + chr3_2:53316933-53316952 Msa0411170:CDS 35.0%
! AACCACTCTCTTTTCCATTT+AGG - chr3_2:53316938-53316957 None:intergenic 35.0%
AAGAATTGTGTACCAGAGAT+AGG - chr3_2:53316987-53317006 None:intergenic 35.0%
TGATTATGACGATTATGAGG+TGG + chr3_2:53317082-53317101 Msa0411170:CDS 35.0%
CTATGCAAAAATTGGAAGTC+AGG + chr3_2:53317180-53317199 Msa0411170:CDS 35.0%
AGAATGCTGATAAACACCAA+AGG - chr3_2:53316220-53316239 None:intergenic 35.0%
TTTAGTTGTGCATCAATCTG+TGG + chr3_2:53316245-53316264 Msa0411170:five_prime_UTR 35.0%
CAAGTCAATGATCATGATGA+AGG + chr3_2:53316293-53316312 Msa0411170:exon 35.0%
AAAGTGGATACAAGAGCAAT+TGG - chr3_2:53316447-53316466 None:intergenic 35.0%
TGAAAATGCCGAGAATCATA+AGG + chr3_2:53316590-53316609 Msa0411170:CDS 35.0%
TTTCTGCTTTCACAATCCAA+TGG - chr3_2:53316648-53316667 None:intergenic 35.0%
TTGTGAAAGCAGAAATCTCT+TGG + chr3_2:53316653-53316672 Msa0411170:CDS 35.0%
TTGCTTCTTTCACTATCTGA+TGG - chr3_2:53316753-53316772 None:intergenic 35.0%
TCAGATAGTGAAAGAAGCAA+TGG + chr3_2:53316753-53316772 Msa0411170:CDS 35.0%
GACTATGATAATCACAGTGA+AGG + chr3_2:53316879-53316898 Msa0411170:CDS 35.0%
AACCTAAATGGAAAAGAGAG+TGG + chr3_2:53316933-53316952 Msa0411170:CDS 35.0%
! AACCACTCTCTTTTCCATTT+AGG - chr3_2:53316938-53316957 None:intergenic 35.0%
AAGAATTGTGTACCAGAGAT+AGG - chr3_2:53316987-53317006 None:intergenic 35.0%
TGATTATGACGATTATGAGG+TGG + chr3_2:53317082-53317101 Msa0411170:CDS 35.0%
CTATGCAAAAATTGGAAGTC+AGG + chr3_2:53317180-53317199 Msa0411170:CDS 35.0%
TAAGATGGTACTCACTTCAC+AGG + chr3_2:53316109-53316128 Msa0411170:five_prime_UTR 40.0%
AAGATGGTACTCACTTCACA+GGG + chr3_2:53316110-53316129 Msa0411170:five_prime_UTR 40.0%
TAACTGAGCATAAGGACAGA+AGG + chr3_2:53316139-53316158 Msa0411170:five_prime_UTR 40.0%
ACTCACTTCGCAAAAACCTT+TGG + chr3_2:53316201-53316220 Msa0411170:five_prime_UTR 40.0%
! AGCTTGCTCCTTATGATTCT+CGG - chr3_2:53316601-53316620 None:intergenic 40.0%
! TCTGACACTGATGATGAAGA+CGG + chr3_2:53316849-53316868 Msa0411170:CDS 40.0%
CCAGAGATAGGATAGATCAA+AGG - chr3_2:53316975-53316994 None:intergenic 40.0%
CCTTTGATCTATCCTATCTC+TGG + chr3_2:53316972-53316991 Msa0411170:CDS 40.0%
TTATGACGATTATGAGGTGG+AGG + chr3_2:53317085-53317104 Msa0411170:CDS 40.0%
! TTAACTATTGGTGGATCACC+TGG - chr3_2:53317312-53317331 None:intergenic 40.0%
TAAGATGGTACTCACTTCAC+AGG + chr3_2:53316109-53316128 Msa0411170:five_prime_UTR 40.0%
AAGATGGTACTCACTTCACA+GGG + chr3_2:53316110-53316129 Msa0411170:five_prime_UTR 40.0%
TAACTGAGCATAAGGACAGA+AGG + chr3_2:53316139-53316158 Msa0411170:five_prime_UTR 40.0%
ACTCACTTCGCAAAAACCTT+TGG + chr3_2:53316201-53316220 Msa0411170:five_prime_UTR 40.0%
! AGCTTGCTCCTTATGATTCT+CGG - chr3_2:53316601-53316620 None:intergenic 40.0%
! TCTGACACTGATGATGAAGA+CGG + chr3_2:53316849-53316868 Msa0411170:CDS 40.0%
CCAGAGATAGGATAGATCAA+AGG - chr3_2:53316975-53316994 None:intergenic 40.0%
CCTTTGATCTATCCTATCTC+TGG + chr3_2:53316972-53316991 Msa0411170:CDS 40.0%
TTATGACGATTATGAGGTGG+AGG + chr3_2:53317085-53317104 Msa0411170:CDS 40.0%
! TTAACTATTGGTGGATCACC+TGG - chr3_2:53317312-53317331 None:intergenic 40.0%
AAGCAGAAATCTCTTGGTCG+TGG + chr3_2:53316659-53316678 Msa0411170:CDS 45.0%
TCATCTTGCTGCATATGCTC+AGG - chr3_2:53316708-53316727 None:intergenic 45.0%
AGAAGCAATGGCTCAATCGT+CGG + chr3_2:53316765-53316784 Msa0411170:CDS 45.0%
AAGTTAGACAGGTTCCTGCT+TGG - chr3_2:53317149-53317168 None:intergenic 45.0%
AAGCAGAAATCTCTTGGTCG+TGG + chr3_2:53316659-53316678 Msa0411170:CDS 45.0%
TCATCTTGCTGCATATGCTC+AGG - chr3_2:53316708-53316727 None:intergenic 45.0%
AGAAGCAATGGCTCAATCGT+CGG + chr3_2:53316765-53316784 Msa0411170:CDS 45.0%
AAGTTAGACAGGTTCCTGCT+TGG - chr3_2:53317149-53317168 None:intergenic 45.0%
TCGAAATCCACCTTCCAAGC+AGG + chr3_2:53317132-53317151 Msa0411170:CDS 50.0%
TAGACAGGTTCCTGCTTGGA+AGG - chr3_2:53317145-53317164 None:intergenic 50.0%
TCGAAATCCACCTTCCAAGC+AGG + chr3_2:53317132-53317151 Msa0411170:CDS 50.0%
TAGACAGGTTCCTGCTTGGA+AGG - chr3_2:53317145-53317164 None:intergenic 50.0%
ACAGGTTCCTGCTTGGAAGG+TGG - chr3_2:53317142-53317161 None:intergenic 55.0%
ACAGGTTCCTGCTTGGAAGG+TGG - chr3_2:53317142-53317161 None:intergenic 55.0%
TGAGGTGGAGGACGACGACG+AGG + chr3_2:53317097-53317116 Msa0411170:CDS 65.0%
TGAGGTGGAGGACGACGACG+AGG + chr3_2:53317097-53317116 Msa0411170:CDS 65.0%
GGTGGAGGACGACGACGAGG+AGG + chr3_2:53317100-53317119 Msa0411170:CDS 70.0%
GGTGGAGGACGACGACGAGG+AGG + chr3_2:53317100-53317119 Msa0411170:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 53316057 53317495 53316057 ID=Msa0411170;Name=Msa0411170
chr3_2 mRNA 53316057 53317495 53316057 ID=Msa0411170-mRNA-1;Parent=Msa0411170;Name=Msa0411170-mRNA-1;_AED=0.03;_eAED=0.03;_QI=243|1|1|1|1|1|2|179|311
chr3_2 exon 53316057 53316993 53316057 ID=Msa0411170-mRNA-1:exon:10606;Parent=Msa0411170-mRNA-1
chr3_2 exon 53317075 53317495 53317075 ID=Msa0411170-mRNA-1:exon:10607;Parent=Msa0411170-mRNA-1
chr3_2 five_prime_UTR 53316057 53316299 53316057 ID=Msa0411170-mRNA-1:five_prime_utr;Parent=Msa0411170-mRNA-1
chr3_2 CDS 53316300 53316993 53316300 ID=Msa0411170-mRNA-1:cds;Parent=Msa0411170-mRNA-1
chr3_2 CDS 53317075 53317316 53317075 ID=Msa0411170-mRNA-1:cds;Parent=Msa0411170-mRNA-1
chr3_2 three_prime_UTR 53317317 53317495 53317317 ID=Msa0411170-mRNA-1:three_prime_utr;Parent=Msa0411170-mRNA-1
Gene Sequence

>Msa0411170

ATGATCATGATGAAGGCAAACAAGCAACATTTCTGTTCCAATCTGAATTCAAATTTAAGTACTTTTCTGACTATCATGCTGATTCTTGTCTCCTTTTCATTTTTCTTTTCAATTTCTAGATACTTCTCTTTTCTTCTTGCAATACCAATTGCTCTTGTATCCACTTTGTTTATTGTCACATTTAAAAAGAAAAAAGGATCTAAAAATGAAAGTGTTGTTCAAGAAAAGTTGATGAAGGAGAAGCTACAACCATCATTAGATGTTAGTGATACTGAATTTGATATACAAAGTGAAAATGCCGAGAATCATAAGGAGCAAGCTGAAGCACAGTTAGAATATTCATTTCCATTGGATTGTGAAAGCAGAAATCTCTTGGTCGTGGATAGAACTTTTGAGTTCAGTGTTCCTGAGCATATGCAGCAAGATGATTTGCGATCAGATTCTACGTTTCCATCAGATAGTGAAAGAAGCAATGGCTCAATCGTCGGCGAAACTTTTGAGTTTGATCACAATAGATATCAAAACTTGAGTAGTCATGATAGGTTAGTTTCTGACACTGATGATGAAGACGGTGAATATGACTATGATAATCACAGTGAAGGATTTAACAGAATTATCATAGATACAAATCATAACCTAAATGGAAAAGAGAGTGGTTTACTCTCATACTCTCCTTTGATCTATCCTATCTCTGATGACAATGATTATGACGATTATGAGGTGGAGGACGACGACGAGGAGGATAACTTGATCGAAATCCACCTTCCAAGCAGGAACCTGTCTAACTTAACTGAAGAATCTATGCAAAAATTGGAAGTCAGGCCAGATTTCATTTCAGAATCCATTTTCAATCAACAAAGTCTCATGCAGCTTTTAGCAGAAATGAATGATATGAATGAGGATGAAAACTTAATTGAGATTGATATTTCCAGGTGA
Protein sequence

>Msa0411170

MIMMKANKQHFCSNLNSNLSTFLTIMLILVSFSFFFSISRYFSFLLAIPIALVSTLFIVTFKKKKGSKNESVVQEKLMKEKLQPSLDVSDTEFDIQSENAENHKEQAEAQLEYSFPLDCESRNLLVVDRTFEFSVPEHMQQDDLRSDSTFPSDSERSNGSIVGETFEFDHNRYQNLSSHDRLVSDTDDEDGEYDYDNHSEGFNRIIIDTNHNLNGKESGLLSYSPLIYPISDDNDYDDYEVEDDDEEDNLIEIHLPSRNLSNLTEESMQKLEVRPDFISESIFNQQSLMQLLAEMNDMNEDENLIEIDISR*