AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0414600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414600 MtrunA17_Chr3g0107611 93.058 533 37 0 1 533 6 538 0.0 1035
Msa0414600 MtrunA17_Chr3g0107541 67.481 532 167 3 1 532 6 531 0.0 724
Msa0414600 MtrunA17_Chr8g0370651 59.195 522 210 2 11 532 10 528 0.0 648
Msa0414600 MtrunA17_Chr8g0370641 58.429 522 210 3 11 532 10 524 0.0 636
Msa0414600 MtrunA17_Chr3g0107561 70.405 321 90 2 1 321 1 316 8.92e-167 476
Msa0414600 MtrunA17_Chr3g0105751 65.595 311 101 3 15 324 16 321 3.19e-149 433
Msa0414600 MtrunA17_Chr3g0107581 88.816 152 14 1 75 226 1 149 1.83e-96 289
Msa0414600 MtrunA17_Chr3g0107551 65.385 208 71 1 325 532 4 210 6.52e-93 282
Msa0414600 MtrunA17_Chr7g0254641 33.591 518 318 11 28 532 16 520 7.79e-88 280
Msa0414600 MtrunA17_Chr3g0105761 61.836 207 76 2 327 533 1 204 2.95e-85 263
Msa0414600 MtrunA17_Chr8g0344191 31.094 521 336 14 16 532 43 544 1.61e-71 238
Msa0414600 MtrunA17_Chr8g0344151 31.174 494 321 12 42 532 33 510 4.25e-71 236
Msa0414600 MtrunA17_Chr3g0086651 32.377 488 305 8 54 532 41 512 6.59e-70 233
Msa0414600 MtrunA17_Chr3g0086661 32.377 488 305 8 54 532 41 512 2.74e-69 231
Msa0414600 MtrunA17_Chr8g0344181 31.174 494 321 12 42 532 35 512 7.41e-68 227
Msa0414600 MtrunA17_Chr8g0372341 53.500 200 93 0 11 210 10 209 3.31e-66 213
Msa0414600 MtrunA17_Chr7g0255531 29.942 521 338 10 18 532 3 502 3.98e-66 223
Msa0414600 MtrunA17_Chr3g0094171 28.762 525 355 9 11 532 5 513 1.41e-65 221
Msa0414600 MtrunA17_Chr4g0057001 29.804 510 331 11 28 532 33 520 6.68e-64 217
Msa0414600 MtrunA17_Chr4g0061381 31.224 490 306 9 54 532 40 509 8.98e-64 216
Msa0414600 MtrunA17_Chr2g0310381 28.216 482 324 8 18 497 1 462 7.79e-63 213
Msa0414600 MtrunA17_Chr3g0086691 31.034 493 305 9 54 532 41 512 8.15e-63 214
Msa0414600 MtrunA17_Chr5g0403351 28.074 488 321 9 18 497 7 472 2.37e-62 213
Msa0414600 MtrunA17_Chr6g0484811 29.051 506 325 11 10 505 1 482 4.00e-62 212
Msa0414600 MtrunA17_Chr3g0101661 29.363 487 313 7 18 497 11 473 8.73e-62 211
Msa0414600 MtrunA17_Chr8g0382901 29.501 461 296 9 41 497 488 923 1.47e-61 218
Msa0414600 MtrunA17_Chr8g0382901 28.067 481 307 8 19 497 1 444 7.77e-58 207
Msa0414600 MtrunA17_Chr4g0053621 27.143 490 324 9 11 494 1 463 2.42e-61 210
Msa0414600 MtrunA17_Chr2g0310391 27.386 482 328 8 18 497 1 462 4.86e-61 209
Msa0414600 MtrunA17_Chr3g0116681 28.298 523 340 14 11 525 7 502 7.42e-61 208
Msa0414600 MtrunA17_Chr8g0339311 28.807 545 350 10 5 532 4 527 8.56e-60 206
Msa0414600 MtrunA17_Chr1g0200961 29.796 490 317 9 16 501 4 470 1.44e-59 205
Msa0414600 MtrunA17_Chr6g0466901 27.853 517 363 8 21 532 10 521 4.96e-59 204
Msa0414600 MtrunA17_Chr3g0116741 27.579 504 335 9 6 504 13 491 6.55e-59 204
Msa0414600 MtrunA17_Chr4g0047631 26.755 527 345 12 7 523 14 509 1.26e-58 202
Msa0414600 MtrunA17_Chr6g0484841 28.632 475 301 9 34 497 26 473 1.71e-58 202
Msa0414600 MtrunA17_Chr3g0101731 26.389 504 339 9 8 505 1 478 2.40e-58 202
Msa0414600 MtrunA17_Chr3g0101611 29.614 466 288 12 40 494 33 469 2.48e-58 202
Msa0414600 MtrunA17_Chr6g0451781 28.656 506 347 9 33 532 64 561 2.53e-58 203
Msa0414600 MtrunA17_Chr3g0082701 29.672 519 348 10 24 533 20 530 2.64e-58 202
Msa0414600 MtrunA17_Chr8g0362481 29.821 446 294 9 87 527 5 436 3.43e-58 200
Msa0414600 MtrunA17_Chr6g0451751 28.600 500 339 10 41 532 39 528 4.07e-58 202
Msa0414600 MtrunA17_Chr6g0466331 28.980 490 321 9 14 497 2 470 4.90e-58 201
Msa0414600 MtrunA17_Chr4g0056951 30.263 456 295 10 82 532 78 515 4.91e-58 201
Msa0414600 MtrunA17_Chr5g0395321 29.243 489 302 12 14 494 11 463 6.37e-58 201
Msa0414600 MtrunA17_Chr3g0084921 28.625 531 335 16 15 527 7 511 6.56e-58 201
Msa0414600 MtrunA17_Chr6g0465511 28.980 490 321 9 14 497 2 470 1.19e-57 200
Msa0414600 MtrunA17_Chr4g0046631 27.160 486 334 9 52 532 53 523 1.33e-57 200
Msa0414600 MtrunA17_Chr8g0372591 62.500 144 53 1 324 466 1 144 1.97e-57 188
Msa0414600 MtrunA17_Chr2g0304871 27.745 501 337 11 43 531 31 518 2.33e-57 199
Msa0414600 MtrunA17_Chr5g0395331 28.721 477 310 11 22 494 20 470 4.51e-57 198
Msa0414600 MtrunA17_Chr7g0235551 29.615 493 313 14 13 494 5 474 4.66e-57 198
Msa0414600 MtrunA17_Chr3g0094231 27.495 491 332 8 45 532 36 505 6.34e-57 198
Msa0414600 MtrunA17_Chr4g0047691 27.273 528 344 13 6 523 15 512 7.24e-57 198
Msa0414600 MtrunA17_Chr5g0401681 27.778 486 314 14 16 494 4 459 7.55e-57 197
Msa0414600 MtrunA17_Chr6g0466941 28.215 521 352 11 18 532 18 522 7.84e-57 198
Msa0414600 MtrunA17_Chr3g0101671 29.412 493 320 12 20 505 11 482 1.02e-56 197
Msa0414600 MtrunA17_Chr8g0361471 27.893 484 323 8 19 497 8 470 1.03e-56 197
Msa0414600 MtrunA17_Chr3g0101701 28.163 490 320 9 16 497 9 474 1.06e-56 197
Msa0414600 MtrunA17_Chr1g0174441 27.757 526 351 12 13 529 24 529 1.09e-56 198
Msa0414600 MtrunA17_Chr4g0058231 26.112 517 349 11 18 523 1 495 1.48e-56 197
Msa0414600 MtrunA17_Chr4g0058201 28.257 499 324 11 36 525 19 492 1.77e-56 196
Msa0414600 MtrunA17_Chr1g0174461 28.008 532 335 13 13 527 5 505 2.32e-56 196
Msa0414600 MtrunA17_Chr5g0445461 28.106 491 326 7 18 505 11 477 3.77e-56 196
Msa0414600 MtrunA17_Chr8g0356001 27.642 492 326 11 11 494 3 472 4.01e-56 196
Msa0414600 MtrunA17_Chr4g0047661 26.426 526 354 13 11 523 9 514 4.86e-56 196
Msa0414600 MtrunA17_Chr3g0101651 28.049 492 314 11 18 497 11 474 7.37e-56 195
Msa0414600 MtrunA17_Chr3g0101711 27.459 488 321 9 18 497 11 473 2.06e-55 194
Msa0414600 MtrunA17_Chr3g0101601 29.109 505 313 12 15 509 8 477 2.99e-55 193
Msa0414600 MtrunA17_Chr4g0058261 28.541 466 303 12 47 504 64 507 3.27e-55 194
Msa0414600 MtrunA17_Chr1g0174471 28.513 491 321 13 13 494 20 489 3.35e-55 194
Msa0414600 MtrunA17_Chr5g0445441 27.495 491 329 9 18 505 52 518 3.54e-55 194
Msa0414600 MtrunA17_Chr4g0008101 27.119 531 352 11 19 532 16 528 5.10e-55 193
Msa0414600 MtrunA17_Chr4g0035921 28.032 503 321 12 18 505 14 490 7.56e-55 192
Msa0414600 MtrunA17_Chr8g0362701 28.480 467 318 9 68 529 52 507 8.86e-55 192
Msa0414600 MtrunA17_Chr5g0395381 28.630 489 280 12 14 494 11 438 1.10e-54 191
Msa0414600 MtrunA17_Chr5g0405001 28.571 483 295 13 41 505 40 490 1.79e-54 192
Msa0414600 MtrunA17_Chr2g0314721 27.788 529 333 13 2 522 3 490 1.87e-54 191
Msa0414600 MtrunA17_Chr4g0047641 26.347 501 341 11 13 505 13 493 3.44e-54 191
Msa0414600 MtrunA17_Chr7g0224551 31.019 432 258 10 82 497 66 473 4.45e-54 191
Msa0414600 MtrunA17_Chr8g0372251 28.721 477 303 10 41 505 31 482 8.39e-54 189
Msa0414600 MtrunA17_Chr4g0058281 27.273 484 324 9 20 497 21 482 1.08e-53 189
Msa0414600 MtrunA17_Chr5g0401691 26.042 480 326 11 17 494 24 476 1.76e-53 189
Msa0414600 MtrunA17_Chr5g0445381 26.848 514 341 10 1 505 21 508 1.87e-53 189
Msa0414600 MtrunA17_Chr5g0446161 27.833 503 309 13 18 501 6 473 2.15e-53 188
Msa0414600 MtrunA17_Chr5g0431641 27.054 499 335 9 9 505 6 477 2.75e-53 188
Msa0414600 MtrunA17_Chr8g0355961 27.846 492 325 11 11 494 3 472 3.35e-53 188
Msa0414600 MtrunA17_Chr8g0390881 27.451 510 329 13 7 505 2 481 5.04e-53 187
Msa0414600 MtrunA17_Chr5g0430101 26.721 494 321 12 19 501 11 474 9.93e-53 187
Msa0414600 MtrunA17_Chr5g0403331 26.518 494 337 10 19 505 7 481 1.56e-52 186
Msa0414600 MtrunA17_Chr7g0224561 31.019 432 258 10 82 497 66 473 1.73e-52 186
Msa0414600 MtrunA17_Chr6g0472311 24.723 542 363 14 7 527 1 518 1.77e-52 186
Msa0414600 MtrunA17_Chr5g0431501 26.531 490 334 10 45 527 33 503 1.86e-52 186
Msa0414600 MtrunA17_Chr5g0431461 26.531 490 334 10 45 527 33 503 1.86e-52 186
Msa0414600 MtrunA17_Chr5g0445451 27.347 490 331 8 18 505 11 477 2.20e-52 186
Msa0414600 MtrunA17_Chr5g0430031 26.815 496 320 12 19 501 12 477 2.26e-52 186
Msa0414600 MtrunA17_Chr1g0176831 27.168 519 325 12 15 522 33 509 3.12e-52 186
Msa0414600 MtrunA17_Chr6g0451741 26.892 502 348 10 41 532 58 550 4.41e-52 186
Msa0414600 MtrunA17_Chr7g0258221 26.236 526 352 13 13 527 5 505 9.86e-52 184
Msa0414600 MtrunA17_Chr5g0430091 27.309 498 319 13 18 501 9 477 1.06e-51 184
Msa0414600 MtrunA17_Chr4g0030711 29.318 440 289 9 65 494 54 481 1.45e-51 184
Msa0414600 MtrunA17_Chr3g0101621 27.869 488 311 11 18 497 6 460 4.30e-51 182
Msa0414600 MtrunA17_Chr1g0160851 25.988 481 327 12 18 494 8 463 4.63e-51 182
Msa0414600 MtrunA17_Chr6g0458561 29.006 493 316 13 53 533 63 533 5.07e-51 182
Msa0414600 MtrunA17_Chr5g0431671 26.652 469 320 6 39 505 32 478 6.59e-51 182
Msa0414600 MtrunA17_Chr1g0213671 28.481 474 312 11 27 494 21 473 9.28e-51 182
Msa0414600 MtrunA17_Chr3g0101691 26.844 488 325 10 18 497 11 474 1.04e-50 181
Msa0414600 MtrunA17_Chr4g0052881 27.376 526 337 13 8 526 4 491 1.28e-50 181
Msa0414600 MtrunA17_Chr7g0265611 26.775 493 323 12 24 505 29 494 1.49e-50 181
Msa0414600 MtrunA17_Chr4g0052861 27.148 512 337 14 18 526 12 490 1.53e-50 181
Msa0414600 MtrunA17_Chr4g0030701 27.826 460 302 10 47 494 37 478 1.54e-50 181
Msa0414600 MtrunA17_Chr1g0205361 26.813 455 305 12 44 494 33 463 1.95e-50 180
Msa0414600 MtrunA17_Chr5g0446151 28.358 469 293 12 43 501 39 474 2.04e-50 180
Msa0414600 MtrunA17_Chr8g0377341 28.373 504 308 16 11 494 25 495 2.29e-50 181
Msa0414600 MtrunA17_Chr6g0451691 27.547 530 347 12 18 532 25 532 2.33e-50 181
Msa0414600 MtrunA17_Chr2g0314731 26.953 512 335 12 15 522 3 479 2.40e-50 180
Msa0414600 MtrunA17_Chr3g0101631 26.978 493 315 10 15 497 8 465 3.25e-50 179
Msa0414600 MtrunA17_Chr1g0174451 27.105 487 331 12 47 527 38 506 3.69e-50 180
Msa0414600 MtrunA17_Chr3g0101811 26.367 512 329 12 18 505 6 493 4.30e-50 180
Msa0414600 MtrunA17_Chr5g0430131 25.755 497 327 14 18 501 9 476 5.70e-50 179
Msa0414600 MtrunA17_Chr1g0174481 27.950 483 327 12 14 494 5 468 6.68e-50 179
Msa0414600 MtrunA17_Chr1g0205371 27.083 480 325 12 18 494 7 464 1.10e-49 178
Msa0414600 MtrunA17_Chr4g0039391 25.902 471 322 10 62 526 50 499 1.17e-49 178
Msa0414600 MtrunA17_Chr8g0339331 26.877 506 335 12 44 532 32 519 1.57e-49 178
Msa0414600 MtrunA17_Chr2g0296651 26.283 487 330 12 8 494 2 459 1.78e-49 177
Msa0414600 MtrunA17_Chr1g0207841 28.767 438 283 9 71 494 58 480 1.92e-49 178
Msa0414600 MtrunA17_Chr5g0445531 26.609 466 310 7 45 505 38 476 2.00e-49 177
Msa0414600 MtrunA17_Chr1g0200951 30.661 499 294 20 48 527 64 529 2.78e-49 178
Msa0414600 MtrunA17_Chr5g0430081 26.166 493 327 12 19 501 10 475 3.51e-49 177
Msa0414600 MtrunA17_Chr1g0162811 27.551 490 322 13 15 497 6 469 3.77e-49 177
Msa0414600 MtrunA17_Chr7g0246221 26.611 481 331 7 18 494 7 469 4.06e-49 177
Msa0414600 MtrunA17_Chr4g0011921 27.373 453 309 8 47 497 31 465 6.49e-49 176
Msa0414600 MtrunA17_Chr3g0101721 27.309 498 317 13 24 505 12 480 7.01e-49 176
Msa0414600 MtrunA17_Chr1g0162801 27.160 486 326 10 18 497 9 472 1.40e-48 175
Msa0414600 MtrunA17_Chr5g0432751 27.615 478 307 13 41 504 29 481 1.59e-48 175
Msa0414600 MtrunA17_Chr1g0198191 25.904 498 346 12 14 505 14 494 2.12e-48 175
Msa0414600 MtrunA17_Chr4g0058191 25.245 511 352 12 20 525 2 487 4.21e-48 174
Msa0414600 MtrunA17_Chr5g0445421 26.626 492 305 10 19 505 90 530 4.50e-48 175
Msa0414600 MtrunA17_Chr8g0372331 59.231 130 52 1 403 532 1 129 5.87e-48 162
Msa0414600 MtrunA17_Chr1g0197891 28.825 451 299 9 44 494 33 461 8.50e-48 173
Msa0414600 MtrunA17_Chr6g0463801 28.875 471 302 11 36 501 28 470 1.05e-47 173
Msa0414600 MtrunA17_Chr5g0431511 25.506 494 334 9 45 527 33 503 1.14e-47 173
Msa0414600 MtrunA17_Chr4g0039901 27.056 462 306 11 39 494 29 465 1.55e-47 172
Msa0414600 MtrunA17_Chr3g0101831 26.305 498 333 9 18 505 6 479 1.87e-47 172
Msa0414600 MtrunA17_Chr4g0024771 25.625 480 325 10 23 497 17 469 1.94e-47 172
Msa0414600 MtrunA17_Chr1g0197881 28.632 475 315 11 22 494 8 460 2.32e-47 172
Msa0414600 MtrunA17_Chr3g0101581 26.680 491 328 12 15 497 5 471 3.18e-47 172
Msa0414600 MtrunA17_Chr1g0197851 28.571 476 315 11 22 494 8 461 3.73e-47 171
Msa0414600 MtrunA17_Chr4g0020041 24.395 496 341 8 11 497 1 471 4.89e-47 171
Msa0414600 MtrunA17_Chr3g0101751 27.022 544 340 14 10 534 5 510 5.10e-47 171
Msa0414600 MtrunA17_Chr4g0011901 25.983 458 309 8 47 497 31 465 6.34e-47 171
Msa0414600 MtrunA17_Chr4g0074581 28.487 509 338 12 1 500 26 517 8.26e-47 171
Msa0414600 MtrunA17_Chr5g0403321 26.170 470 320 9 44 505 33 483 1.28e-46 170
Msa0414600 MtrunA17_Chr7g0218611 25.607 453 315 10 48 497 36 469 1.62e-46 169
Msa0414600 MtrunA17_Chr4g0052851 26.190 462 303 11 36 494 24 450 6.32e-46 168
Msa0414600 MtrunA17_Chr1g0197871 27.333 450 305 9 45 494 34 461 8.65e-46 167
Msa0414600 MtrunA17_Chr4g0011961 25.910 467 320 10 36 497 19 464 1.07e-45 167
Msa0414600 MtrunA17_Chr3g0101821 25.852 499 333 10 17 505 7 478 1.40e-45 167
Msa0414600 MtrunA17_Chr3g0101761 27.345 501 323 12 18 505 6 478 1.68e-45 167
Msa0414600 MtrunA17_Chr7g0218601 25.470 479 329 12 22 497 15 468 2.40e-45 166
Msa0414600 MtrunA17_Chr3g0101571 25.956 497 336 10 16 505 5 476 8.48e-45 165
Msa0414600 MtrunA17_Chr3g0101801 26.494 502 331 11 11 505 15 485 1.02e-44 165
Msa0414600 MtrunA17_Chr1g0164211 26.477 457 308 10 42 494 28 460 2.82e-44 163
Msa0414600 MtrunA17_Chr1g0167321 26.446 484 328 7 20 497 8 469 3.35e-44 163
Msa0414600 MtrunA17_Chr6g0451641 25.047 527 359 14 18 532 19 521 4.18e-44 163
Msa0414600 MtrunA17_Chr1g0156101 25.581 473 330 11 34 497 21 480 4.67e-44 163
Msa0414600 MtrunA17_Chr5g0419691 25.708 459 317 9 43 497 27 465 1.15e-43 162
Msa0414600 MtrunA17_Chr4g0011871 24.790 476 335 9 43 516 27 481 1.16e-43 162
Msa0414600 MtrunA17_Chr8g0371761 53.472 144 56 1 345 477 1 144 1.29e-43 151
Msa0414600 MtrunA17_Chr8g0346261 27.010 485 324 15 47 526 86 545 2.29e-43 162
Msa0414600 MtrunA17_Chr7g0246131 25.667 487 331 8 18 495 7 471 2.60e-43 161
Msa0414600 MtrunA17_Chr2g0280261 28.448 464 291 11 43 497 32 463 5.38e-43 160
Msa0414600 MtrunA17_Chr4g0076161 23.541 497 337 11 14 497 6 472 1.16e-42 159
Msa0414600 MtrunA17_Chr5g0406651 25.322 466 328 8 34 497 19 466 2.73e-42 158
Msa0414600 MtrunA17_Chr4g0011981 26.068 468 319 11 36 497 19 465 3.22e-42 157
Msa0414600 MtrunA17_Chr4g0046321 27.872 470 290 17 47 497 36 475 3.51e-42 158
Msa0414600 MtrunA17_Chr4g0046331 27.215 474 290 18 47 497 36 477 5.79e-42 157
Msa0414600 MtrunA17_Chr8g0357421 25.749 501 331 10 18 505 6 478 6.45e-42 157
Msa0414600 MtrunA17_Chr3g0101741 26.402 428 278 8 85 505 3 400 8.31e-42 155
Msa0414600 MtrunA17_Chr2g0296661 26.841 421 280 10 81 494 65 464 8.50e-42 157
Msa0414600 MtrunA17_Chr5g0419451 26.991 452 295 13 51 494 62 486 1.30e-41 156
Msa0414600 MtrunA17_Chr4g0046351 26.907 472 292 18 47 497 36 475 1.35e-41 156
Msa0414600 MtrunA17_Chr8g0357431 26.494 502 327 12 18 505 6 479 6.68e-41 154
Msa0414600 MtrunA17_Chr4g0011881 26.593 455 309 11 47 497 32 465 1.65e-40 153
Msa0414600 MtrunA17_Chr8g0351801 27.650 434 270 10 85 494 71 484 3.38e-40 152
Msa0414600 MtrunA17_Chr7g0246181 26.185 443 306 6 56 495 45 469 1.04e-39 150
Msa0414600 MtrunA17_Chr7g0246151 24.638 414 300 4 82 495 68 469 1.83e-39 150
Msa0414600 MtrunA17_Chr5g0430111 24.550 444 293 12 19 448 12 427 2.01e-39 148
Msa0414600 MtrunA17_Chr1g0156081 25.163 461 321 10 47 497 58 504 2.19e-39 150
Msa0414600 MtrunA17_Chr1g0210091 25.463 432 291 12 85 505 103 514 2.63e-39 150
Msa0414600 MtrunA17_Chr6g0463791 23.636 495 329 13 19 497 7 468 1.14e-38 148
Msa0414600 MtrunA17_Chr4g0017411 25.352 497 327 15 36 526 21 479 1.48e-37 144
Msa0414600 MtrunA17_Chr7g0246121 25.060 415 293 6 82 494 68 466 2.46e-36 141
Msa0414600 MtrunA17_Chr2g0310351 34.884 172 109 1 326 497 1 169 4.00e-36 133
Msa0414600 MtrunA17_Chr7g0258211 26.914 431 266 13 85 494 76 478 7.60e-36 140
Msa0414600 MtrunA17_Chr1g0160861 30.952 252 165 6 244 494 61 304 8.33e-35 134
Msa0414600 MtrunA17_Chr8g0364651 22.073 521 377 11 13 527 2 499 1.18e-33 134
Msa0414600 MtrunA17_Chr2g0280121 25.185 405 286 7 99 497 88 481 2.14e-33 133
Msa0414600 MtrunA17_Chr5g0430071 27.372 274 186 5 235 501 63 330 3.45e-33 130
Msa0414600 MtrunA17_Chr5g0409051 25.482 467 323 10 41 495 25 478 4.75e-33 132
Msa0414600 MtrunA17_Chr2g0280081 24.781 456 315 11 82 527 568 1005 7.95e-33 134
Msa0414600 MtrunA17_Chr2g0280081 25.117 426 292 10 82 497 67 475 3.48e-29 122
Msa0414600 MtrunA17_Chr2g0314781 37.017 181 99 2 342 522 1 166 1.11e-32 123
Msa0414600 MtrunA17_Chr4g0046681 28.636 220 155 2 313 532 18 235 1.22e-32 125
Msa0414600 MtrunA17_Chr2g0280071 23.838 495 341 13 16 497 37 508 1.57e-32 132
Msa0414600 MtrunA17_Chr6g0451811 33.014 209 138 2 324 532 3 209 2.11e-32 123
Msa0414600 MtrunA17_Chr5g0431591 28.470 281 186 4 231 505 24 295 3.37e-32 126
Msa0414600 MtrunA17_Chr1g0174431 35.260 173 107 2 326 494 1 172 1.11e-31 121
Msa0414600 MtrunA17_Chr1g0156061 24.094 469 274 12 35 497 44 436 3.33e-31 126
Msa0414600 MtrunA17_Chr6g0451681 30.328 244 163 4 292 532 242 481 5.56e-31 125
Msa0414600 MtrunA17_Chr5g0402981 33.505 194 126 3 340 532 6 197 1.65e-30 117
Msa0414600 MtrunA17_Chr4g0058211 29.353 201 139 1 325 525 18 215 1.88e-29 115
Msa0414600 MtrunA17_Chr8g0390871 33.511 188 120 4 319 505 20 203 1.36e-28 113
Msa0414600 MtrunA17_Chr4g0046661 28.037 214 152 2 319 532 18 229 5.16e-28 112
Msa0414600 MtrunA17_Chr8g0387101 24.439 446 310 13 92 527 79 507 7.27e-28 117
Msa0414600 MtrunA17_Chr5g0446101 32.864 213 132 5 289 497 77 282 2.62e-27 112
Msa0414600 MtrunA17_Chr6g0477081 34.518 197 108 3 244 437 64 242 3.38e-27 110
Msa0414600 MtrunA17_Chr5g0413911 22.222 477 329 13 42 494 39 497 4.28e-27 114
Msa0414600 MtrunA17_Chr4g0046701 33.939 165 107 2 368 532 1 163 1.41e-26 105
Msa0414600 MtrunA17_Chr6g0451771 31.280 211 135 3 326 532 22 226 3.66e-26 106
Msa0414600 MtrunA17_Chr2g0280011 29.327 208 140 3 325 527 7 212 4.71e-26 105
Msa0414600 MtrunA17_Chr2g0280061 32.778 180 111 4 325 497 7 183 3.98e-25 103
Msa0414600 MtrunA17_Chr2g0280041 22.222 459 323 10 82 527 99 536 1.04e-24 107
Msa0414600 MtrunA17_Chr4g0011851 27.461 193 133 2 324 516 14 199 2.66e-24 100
Msa0414600 MtrunA17_Chr3g0101591 34.132 167 107 2 339 505 52 215 2.38e-23 99.0
Msa0414600 MtrunA17_Chr3g0086681 39.370 127 76 1 369 494 8 134 2.38e-23 97.1
Msa0414600 MtrunA17_Chr5g0445761 32.558 172 113 1 326 497 1 169 3.84e-23 97.4
Msa0414600 MtrunA17_Chr5g0430151 30.667 150 100 2 357 505 6 152 3.86e-23 96.7
Msa0414600 MtrunA17_Chr4g0011941 28.488 172 120 1 326 497 1 169 4.42e-23 97.1
Msa0414600 MtrunA17_Chr7g0255131 23.640 478 321 17 12 473 8 457 9.60e-23 101
Msa0414600 MtrunA17_Chr5g0423621 32.680 153 98 2 342 494 1 148 5.05e-22 93.6
Msa0414600 MtrunA17_Chr5g0402971 24.820 278 197 6 51 324 46 315 2.07e-21 95.1
Msa0414600 MtrunA17_Chr5g0445351 34.507 142 90 1 354 495 52 190 2.89e-21 92.4
Msa0414600 MtrunA17_Chr6g0463621 28.324 173 122 2 326 497 1 172 6.45e-21 90.9
Msa0414600 MtrunA17_Chr5g0430041 31.126 151 100 3 352 501 1 148 1.35e-20 89.4
Msa0414600 MtrunA17_Chr5g0444981 33.742 163 104 2 332 494 17 175 6.76e-20 88.6
Msa0414600 MtrunA17_Chr5g0445371 26.407 231 134 4 277 505 11 207 1.90e-19 87.8
Msa0414600 MtrunA17_Chr5g0445751 25.776 322 213 9 6 324 7 305 4.73e-19 88.2
Msa0414600 MtrunA17_Chr4g0046691 24.903 257 173 5 52 307 46 283 8.00e-19 87.4
Msa0414600 MtrunA17_Chr4g0038271 23.188 483 308 17 20 473 62 510 1.24e-18 89.4
Msa0414600 MtrunA17_Chr1g0164321 26.562 256 165 6 234 473 249 497 1.44e-18 89.0
Msa0414600 MtrunA17_Chr3g0116731 36.752 117 67 1 377 493 1 110 1.77e-18 82.0
Msa0414600 MtrunA17_Chr4g0028321 35.507 138 76 5 377 505 1 134 4.34e-17 79.0
Msa0414600 MtrunA17_Chr3g0117301 32.203 118 77 1 377 494 1 115 6.46e-17 77.0
Msa0414600 MtrunA17_Chr8g0364631 22.965 479 326 11 45 505 32 485 1.42e-16 82.4
Msa0414600 MtrunA17_Chr3g0101541 33.058 121 78 1 374 494 1 118 4.95e-16 75.1
Msa0414600 MtrunA17_Chr6g0449381 25.792 221 157 3 258 473 237 455 1.45e-15 79.3
Msa0414600 MtrunA17_Chr4g0011861 23.488 281 199 7 43 321 27 293 2.11e-15 77.4
Msa0414600 MtrunA17_Chr7g0225531 21.696 507 347 16 3 492 7 480 2.39e-15 79.0
Msa0414600 MtrunA17_Chr1g0174421 24.590 305 214 10 18 321 22 311 2.49e-15 77.4
Msa0414600 MtrunA17_Chr5g0445361 34.579 107 67 1 399 505 11 114 2.96e-15 72.8
Msa0414600 MtrunA17_Chr8g0348751 22.976 457 296 17 48 473 29 460 3.27e-15 78.6
Msa0414600 MtrunA17_Chr4g0011931 24.715 263 178 7 47 306 31 276 1.09e-14 74.7
Msa0414600 MtrunA17_Chr6g0449331 23.985 271 184 6 258 508 238 506 1.68e-14 76.3
Msa0414600 MtrunA17_Chr8g0387001 23.395 483 303 19 25 473 6 455 1.87e-14 75.9
Msa0414600 MtrunA17_Chr4g0030741 24.476 286 187 9 71 348 84 348 2.73e-14 74.3
Msa0414600 MtrunA17_Chr6g0449341 23.973 292 196 8 237 508 269 554 4.30e-14 75.1
Msa0414600 MtrunA17_Chr8g0351401 27.615 239 145 9 252 473 232 459 9.67e-14 73.6
Msa0414600 MtrunA17_Chr6g0463611 21.587 315 207 10 18 321 21 306 1.20e-13 72.4
Msa0414600 MtrunA17_Chr3g0141801 20.404 495 341 16 19 504 15 465 1.74e-13 72.8
Msa0414600 MtrunA17_Chr4g0046671 22.022 277 194 6 43 310 39 302 2.00e-13 71.2
Msa0414600 MtrunA17_Chr1g0183611 25.620 242 171 5 258 492 155 394 7.90e-13 70.5
Msa0414600 MtrunA17_Chr5g0445411 27.500 160 111 2 17 172 13 171 8.83e-13 67.0
Msa0414600 MtrunA17_Chr4g0076171 25.786 159 94 2 342 497 1 138 1.33e-12 66.2
Msa0414600 MtrunA17_Chr1g0184461 22.062 485 338 17 18 491 11 466 1.82e-12 69.7
Msa0414600 MtrunA17_Chr1g0163451 23.651 241 176 4 258 492 255 493 2.63e-12 69.3
Msa0414600 MtrunA17_Chr2g0321171 26.027 219 142 7 258 473 246 447 2.95e-12 68.9
Msa0414600 MtrunA17_Chr1g0184421 20.085 473 342 17 32 491 17 466 5.03e-12 68.2
Msa0414600 MtrunA17_Chr1g0163421 23.967 242 174 7 258 492 271 509 6.00e-12 68.2
Msa0414600 MtrunA17_Chr4g0056981 42.254 71 41 0 352 422 1 71 9.12e-12 60.8
Msa0414600 MtrunA17_Chr3g0107511 23.828 256 176 8 276 526 236 477 1.79e-11 66.6
Msa0414600 MtrunA17_Chr5g0396521 21.404 285 178 8 259 506 277 552 1.83e-11 66.6
Msa0414600 MtrunA17_Chr8g0372711 24.865 185 127 4 314 495 282 457 1.88e-11 66.6
Msa0414600 MtrunA17_Chr6g0449351 23.636 220 161 4 258 473 197 413 2.33e-11 66.2
Msa0414600 MtrunA17_Chr5g0431631 27.273 143 103 1 14 156 19 160 2.67e-11 62.0
Msa0414600 MtrunA17_Chr2g0313771 23.280 378 244 15 137 499 153 499 3.15e-11 65.9
Msa0414600 MtrunA17_Chr5g0443731 24.280 243 168 7 256 494 214 444 3.70e-11 65.5
Msa0414600 MtrunA17_Chr5g0430171 24.793 242 152 9 18 252 9 227 5.07e-11 62.8
Msa0414600 MtrunA17_Chr1g0176851 24.901 253 163 9 135 380 2 234 6.80e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414600 AT4G39950.1 52.264 530 242 6 4 532 18 537 0.0 563
Msa0414600 AT4G39950.2 52.264 530 242 6 4 532 58 577 0.0 563
Msa0414600 AT2G22330.2 54.141 495 219 5 39 532 75 562 0.0 561
Msa0414600 AT2G22330.1 54.141 495 219 5 39 532 52 539 0.0 560
Msa0414600 AT5G05260.2 52.642 492 225 6 45 532 40 527 0.0 538
Msa0414600 AT5G05260.1 50.000 492 206 6 45 532 40 495 1.92e-170 491
Msa0414600 AT1G58260.1 46.257 521 268 6 19 532 10 525 1.84e-164 478
Msa0414600 AT1G79370.1 45.541 527 270 5 19 532 16 538 1.06e-158 463
Msa0414600 AT5G35917.1 47.571 494 206 10 45 532 42 488 8.04e-157 456
Msa0414600 AT1G16410.1 39.703 539 305 10 6 532 3 533 3.41e-133 398
Msa0414600 AT1G16400.1 39.429 525 300 8 20 532 14 532 6.90e-130 389
Msa0414600 AT1G16410.2 37.470 419 245 8 6 414 3 414 3.20e-91 286
Msa0414600 AT1G01280.1 34.879 453 278 8 85 532 69 509 1.09e-85 274
Msa0414600 AT5G07990.1 32.765 528 319 12 18 532 4 508 7.78e-74 243
Msa0414600 AT4G12300.1 30.350 514 325 11 28 532 26 515 2.59e-64 218
Msa0414600 AT4G12320.1 30.593 523 329 12 18 532 21 517 2.77e-63 216
Msa0414600 AT2G40890.1 28.876 516 329 13 25 532 16 501 4.28e-61 209
Msa0414600 AT4G22690.1 29.314 481 311 8 54 528 93 550 5.27e-60 208
Msa0414600 AT4G22710.1 29.339 484 307 9 54 528 62 519 6.28e-60 207
Msa0414600 AT2G23190.1 27.799 518 330 15 19 526 49 532 2.40e-59 206
Msa0414600 AT4G31940.1 29.386 456 310 9 47 493 33 485 1.01e-58 204
Msa0414600 AT4G31970.1 28.485 495 340 9 47 532 33 522 9.82e-58 201
Msa0414600 AT4G37430.1 26.012 519 338 14 18 526 10 492 1.36e-57 200
Msa0414600 AT5G06900.1 30.531 452 288 13 45 493 34 462 2.38e-56 197
Msa0414600 AT4G37340.1 27.485 513 335 15 22 526 6 489 4.37e-56 196
Msa0414600 AT4G37320.1 28.210 514 332 14 19 526 6 488 1.05e-55 195
Msa0414600 AT5G44620.1 28.539 445 301 6 54 497 55 483 2.95e-55 194
Msa0414600 AT3G61880.1 29.940 501 315 16 35 526 56 529 7.85e-55 193
Msa0414600 AT2G25160.1 29.735 528 343 13 18 532 6 518 8.51e-55 193
Msa0414600 AT4G37370.1 28.092 477 314 11 21 494 6 456 8.67e-55 192
Msa0414600 AT5G36220.1 27.533 523 326 14 15 526 14 494 9.02e-55 192
Msa0414600 AT3G61880.2 29.940 501 315 16 35 526 56 529 2.28e-54 192
Msa0414600 AT2G45550.1 27.439 492 328 14 13 497 7 476 2.21e-53 189
Msa0414600 AT3G28740.1 29.284 461 291 13 40 494 34 465 4.97e-53 188
Msa0414600 AT2G23220.1 27.075 506 326 15 31 526 32 504 7.66e-53 187
Msa0414600 AT4G12310.1 27.789 493 317 11 54 533 53 519 8.97e-53 187
Msa0414600 AT5G57220.1 26.761 497 316 13 1 494 1 452 1.08e-52 186
Msa0414600 AT2G14100.1 28.671 429 283 9 72 494 65 476 1.51e-51 184
Msa0414600 AT4G31950.1 27.810 525 344 12 22 532 8 511 2.86e-51 183
Msa0414600 AT5G67310.1 25.934 482 321 10 18 494 18 468 3.72e-51 183
Msa0414600 AT3G25180.1 28.723 470 298 11 75 532 68 512 4.24e-51 183
Msa0414600 AT4G37360.1 27.443 481 318 12 18 494 4 457 1.39e-50 181
Msa0414600 AT4G12330.1 29.448 489 300 14 54 528 55 512 2.00e-50 181
Msa0414600 AT4G37410.1 25.364 481 328 13 19 494 4 458 2.06e-50 181
Msa0414600 AT5G04330.1 27.579 504 310 14 47 527 34 505 2.48e-50 181
Msa0414600 AT4G37310.1 25.096 522 363 14 19 531 4 506 3.64e-50 180
Msa0414600 AT2G45560.1 26.122 490 337 12 13 497 7 476 3.80e-50 180
Msa0414600 AT2G45570.1 27.166 427 295 6 82 505 72 485 4.00e-50 180
Msa0414600 AT3G20140.1 28.484 488 297 16 36 504 29 483 4.14e-50 180
Msa0414600 AT4G37330.1 28.571 490 293 18 21 494 6 454 6.47e-50 179
Msa0414600 AT4G36220.1 27.061 473 299 10 52 505 47 492 1.11e-49 179
Msa0414600 AT5G35715.1 28.306 431 276 10 85 504 3 411 2.15e-49 176
Msa0414600 AT1G33720.1 25.403 496 349 11 13 505 7 484 2.63e-49 178
Msa0414600 AT4G15360.1 27.879 495 315 13 13 494 9 474 3.03e-49 178
Msa0414600 AT4G15330.1 26.316 513 339 12 20 525 14 494 4.05e-49 177
Msa0414600 AT1G13100.1 28.539 445 279 12 82 511 59 479 4.63e-49 177
Msa0414600 AT3G26830.1 26.423 492 336 10 22 506 3 475 5.97e-49 176
Msa0414600 AT2G27000.1 28.506 435 283 12 70 494 59 475 8.39e-49 176
Msa0414600 AT5G10610.1 25.344 509 351 11 21 525 6 489 9.09e-49 176
Msa0414600 AT1G13090.2 27.801 482 304 12 40 506 23 475 1.48e-48 175
Msa0414600 AT3G20130.1 29.099 433 278 10 72 494 64 477 3.67e-48 175
Msa0414600 AT3G10560.1 25.607 535 365 13 1 527 4 513 4.51e-48 174
Msa0414600 AT3G48310.1 26.609 466 298 10 41 497 28 458 4.65e-48 174
Msa0414600 AT3G48280.1 26.255 518 340 12 18 528 8 490 5.99e-48 174
Msa0414600 AT1G13110.1 26.550 516 316 14 1 497 1 472 8.06e-48 174
Msa0414600 AT3G20090.2 28.670 436 276 10 72 494 65 478 1.01e-47 174
Msa0414600 AT3G52970.1 26.994 489 321 15 22 495 13 480 1.36e-47 173
Msa0414600 AT5G04630.1 25.657 495 346 7 15 505 11 487 1.94e-47 172
Msa0414600 AT3G61040.1 27.887 459 303 11 40 494 28 462 2.70e-47 172
Msa0414600 AT3G32047.1 27.146 431 286 10 72 494 64 474 2.78e-47 172
Msa0414600 AT1G01190.1 29.918 488 288 22 39 509 67 517 3.80e-47 172
Msa0414600 AT1G01190.2 29.918 488 288 22 39 509 72 522 3.80e-47 172
Msa0414600 AT5G25120.1 26.626 492 322 15 14 497 2 462 4.02e-47 171
Msa0414600 AT3G48270.1 27.706 462 292 14 41 494 27 454 7.20e-47 171
Msa0414600 AT3G44250.1 28.392 479 300 12 40 504 23 472 8.70e-47 171
Msa0414600 AT3G52970.2 26.148 501 324 14 22 495 13 494 1.14e-46 171
Msa0414600 AT4G31500.1 25.870 460 321 8 41 497 25 467 1.19e-46 170
Msa0414600 AT4G37400.1 25.338 517 339 14 18 526 12 489 2.13e-46 169
Msa0414600 AT5G04660.1 26.786 448 313 6 82 527 78 512 2.28e-46 170
Msa0414600 AT1G74540.1 26.061 495 328 12 19 505 1 465 4.77e-46 169
Msa0414600 AT5G25140.1 26.263 495 320 14 14 497 2 462 5.24e-46 168
Msa0414600 AT3G48300.1 26.134 463 304 12 47 503 31 461 1.14e-45 167
Msa0414600 AT4G13770.1 25.667 487 321 12 20 497 14 468 1.15e-45 167
Msa0414600 AT3G48300.2 26.134 463 304 12 47 503 33 463 1.18e-45 167
Msa0414600 AT5G10600.1 24.904 522 348 14 13 525 19 505 1.68e-45 167
Msa0414600 AT3G26170.1 26.004 523 340 16 14 524 4 491 2.34e-45 167
Msa0414600 AT3G53300.1 27.349 479 301 14 40 501 23 471 5.45e-45 166
Msa0414600 AT3G48290.1 26.170 470 303 12 41 501 29 463 5.60e-45 166
Msa0414600 AT2G46660.1 28.511 470 303 16 41 505 66 507 6.04e-45 166
Msa0414600 AT1G50520.1 27.733 494 322 15 15 494 8 480 6.46e-45 166
Msa0414600 AT3G26150.1 26.245 522 332 17 18 524 8 491 7.88e-45 165
Msa0414600 AT1G13080.1 26.860 484 331 11 20 497 4 470 9.26e-45 165
Msa0414600 AT3G53280.1 26.708 483 317 11 40 511 23 479 1.01e-44 165
Msa0414600 AT5G35920.1 52.027 148 69 2 385 532 8 153 1.13e-44 155
Msa0414600 AT3G26210.1 27.356 435 274 12 85 504 68 475 1.43e-44 164
Msa0414600 AT3G20130.2 29.327 416 266 10 88 494 53 449 2.39e-44 164
Msa0414600 AT5G57260.1 26.216 473 302 13 47 502 32 474 4.21e-44 163
Msa0414600 AT1G66540.1 27.543 403 251 10 134 526 4 375 4.56e-44 160
Msa0414600 AT3G26280.1 24.699 498 329 14 22 505 15 480 7.71e-44 162
Msa0414600 AT3G26280.2 24.699 498 329 14 22 505 32 497 1.19e-43 162
Msa0414600 AT1G74110.1 26.667 495 339 16 24 509 43 522 1.72e-43 162
Msa0414600 AT5G25180.1 26.186 485 314 14 23 497 12 462 1.95e-43 161
Msa0414600 AT2G24180.1 26.763 482 315 14 45 515 36 490 2.76e-43 161
Msa0414600 AT3G26330.1 25.486 463 304 12 47 497 33 466 3.02e-43 161
Msa0414600 AT3G26320.1 25.702 463 303 11 47 497 33 466 3.55e-43 160
Msa0414600 AT1G74550.1 25.192 520 347 13 19 532 3 486 4.67e-43 160
Msa0414600 AT3G26310.1 25.761 493 324 12 17 497 3 465 5.67e-43 160
Msa0414600 AT1G11610.1 26.680 491 322 16 41 521 29 491 1.10e-42 159
Msa0414600 AT3G26300.1 25.597 461 306 12 47 497 33 466 1.18e-42 159
Msa0414600 AT1G33720.4 27.198 364 251 6 143 505 2 352 1.39e-42 156
Msa0414600 AT1G33720.3 27.198 364 251 6 143 505 2 352 1.39e-42 156
Msa0414600 AT1G33720.5 27.198 364 251 6 143 505 2 352 1.39e-42 156
Msa0414600 AT1G11610.2 26.824 466 305 15 41 498 29 466 1.53e-42 159
Msa0414600 AT3G26160.1 24.762 525 350 14 14 527 4 494 1.54e-42 159
Msa0414600 AT3G20110.1 25.755 497 320 12 13 495 7 468 1.86e-42 159
Msa0414600 AT3G20950.1 26.626 492 318 15 22 494 14 481 2.34e-42 159
Msa0414600 AT3G20120.4 27.397 438 281 12 72 495 63 477 3.97e-42 158
Msa0414600 AT3G20080.2 26.737 475 307 13 36 494 29 478 4.36e-42 158
Msa0414600 AT3G20080.1 26.737 475 307 13 36 494 29 478 4.36e-42 158
Msa0414600 AT3G26180.1 26.166 493 326 14 42 524 27 491 4.67e-42 157
Msa0414600 AT4G15330.2 25.098 510 321 12 20 525 14 466 4.84e-42 157
Msa0414600 AT3G20940.1 25.840 476 310 14 36 494 29 478 1.09e-41 157
Msa0414600 AT3G26190.1 24.731 465 323 10 40 497 23 467 2.15e-41 155
Msa0414600 AT3G20960.2 28.571 420 268 10 85 494 79 476 2.36e-41 156
Msa0414600 AT4G15350.1 27.021 433 288 11 72 494 57 471 2.96e-41 155
Msa0414600 AT5G47990.1 28.029 421 269 11 85 494 80 477 3.24e-41 155
Msa0414600 AT3G20100.1 26.697 442 286 12 68 494 59 477 3.37e-41 155
Msa0414600 AT2G45580.1 26.202 416 291 6 82 494 72 474 3.72e-41 155
Msa0414600 AT5G06905.1 25.646 503 332 17 22 505 9 488 6.34e-41 155
Msa0414600 AT3G26290.1 26.539 471 307 11 38 497 24 466 1.18e-40 154
Msa0414600 AT3G26290.2 26.539 471 307 11 38 497 37 479 1.46e-40 154
Msa0414600 AT3G48290.2 24.449 499 307 12 41 504 29 492 3.30e-40 153
Msa0414600 AT3G10570.1 25.280 447 320 5 82 527 80 513 3.32e-40 152
Msa0414600 AT3G48320.1 25.257 487 321 13 20 500 12 461 4.31e-40 152
Msa0414600 AT1G33730.1 27.171 357 246 6 150 505 5 348 7.87e-40 149
Msa0414600 AT1G33730.2 27.171 357 246 6 150 505 5 348 7.87e-40 149
Msa0414600 AT5G36220.2 30.422 332 198 9 200 526 45 348 7.90e-40 148
Msa0414600 AT4G13310.1 24.724 453 311 12 49 494 34 463 8.68e-40 151
Msa0414600 AT3G26270.1 25.910 467 311 13 42 497 29 471 1.55e-39 150
Msa0414600 AT5G42580.1 25.659 417 272 9 85 494 77 462 2.84e-39 150
Msa0414600 AT1G28430.1 25.641 429 300 8 71 494 61 475 2.97e-39 150
Msa0414600 AT5G42590.1 26.112 517 342 17 17 520 2 491 4.79e-39 149
Msa0414600 AT4G15380.1 25.481 416 288 5 82 494 77 473 4.83e-39 149
Msa0414600 AT3G20090.1 29.834 362 222 9 143 494 1 340 5.43e-39 147
Msa0414600 AT4G13290.1 24.945 453 302 13 49 494 35 456 6.42e-39 149
Msa0414600 AT1G50560.1 28.066 424 268 12 85 494 81 481 9.12e-39 149
Msa0414600 AT3G26230.1 24.600 500 337 13 18 505 5 476 1.77e-38 147
Msa0414600 AT1G13710.1 27.563 439 281 14 98 526 101 512 2.06e-38 148
Msa0414600 AT5G25130.1 25.051 491 331 13 14 497 2 462 2.26e-38 147
Msa0414600 AT2G45580.2 32.283 254 164 4 244 494 72 320 6.77e-38 143
Msa0414600 AT2G30490.1 24.942 433 297 10 81 504 67 480 7.35e-38 146
Msa0414600 AT2G30770.1 24.744 489 332 12 42 521 30 491 8.01e-38 145
Msa0414600 AT3G26200.1 24.341 493 340 11 39 524 22 488 9.03e-38 145
Msa0414600 AT1G11600.1 24.646 495 345 9 18 500 6 484 1.16e-37 145
Msa0414600 AT1G66540.2 29.429 333 194 10 204 526 15 316 1.18e-37 141
Msa0414600 AT2G42250.1 24.951 513 345 13 24 521 18 505 1.54e-37 145
Msa0414600 AT2G30750.1 25.767 489 327 13 42 521 30 491 2.95e-37 144
Msa0414600 AT1G33720.2 25.773 388 251 7 143 505 2 377 3.79e-37 142
Msa0414600 AT3G20960.1 29.412 374 240 10 128 494 17 373 1.21e-36 141
Msa0414600 AT5G09970.1 27.957 465 289 20 47 495 71 505 2.57e-36 142
Msa0414600 AT2G02580.1 25.203 492 324 13 21 497 4 466 2.98e-35 139
Msa0414600 AT3G20120.2 28.297 364 227 11 143 495 1 341 5.86e-35 135
Msa0414600 AT3G20120.3 28.297 364 227 11 143 495 1 341 5.86e-35 135
Msa0414600 AT3G20120.1 28.297 364 227 11 143 495 1 341 5.86e-35 135
Msa0414600 AT3G26220.1 25.352 497 339 14 20 505 4 479 5.24e-34 135
Msa0414600 AT1G64940.1 23.729 531 359 14 16 526 4 508 3.42e-33 133
Msa0414600 AT2G25160.2 29.275 386 249 9 18 392 6 378 4.05e-32 128
Msa0414600 AT2G05180.1 24.870 386 258 10 72 446 63 427 1.53e-31 127
Msa0414600 AT2G27010.1 23.555 467 301 12 70 525 55 476 7.37e-31 126
Msa0414600 AT3G20080.4 27.869 366 225 12 143 494 1 341 8.59e-31 124
Msa0414600 AT3G20080.5 27.869 366 225 12 143 494 1 341 8.59e-31 124
Msa0414600 AT3G20080.6 27.869 366 225 12 143 494 1 341 8.59e-31 124
Msa0414600 AT3G20080.3 27.869 366 225 12 143 494 1 341 8.59e-31 124
Msa0414600 AT3G20935.1 34.884 172 109 2 325 494 133 303 2.36e-30 122
Msa0414600 AT5G24960.1 24.307 469 320 13 35 494 21 463 5.41e-30 123
Msa0414600 AT5G24950.1 23.491 464 322 12 39 494 24 462 9.90e-30 122
Msa0414600 AT1G64930.1 22.000 500 349 14 45 526 32 508 1.56e-29 122
Msa0414600 AT3G25180.2 28.308 325 210 8 75 392 68 376 8.43e-29 118
Msa0414600 AT1G64950.1 24.652 503 331 17 45 526 32 507 5.20e-28 117
Msa0414600 AT1G13080.2 25.356 351 242 9 152 497 17 352 2.18e-27 114
Msa0414600 AT3G61040.2 25.714 385 261 10 40 420 28 391 2.60e-27 114
Msa0414600 AT4G20240.1 23.628 419 290 13 42 454 30 424 6.09e-27 114
Msa0414600 AT2G12190.1 23.567 471 315 14 45 494 32 478 1.73e-26 113
Msa0414600 AT3G03470.1 22.449 490 348 11 18 494 7 477 2.05e-26 113
Msa0414600 AT1G58265.1 44.262 122 55 3 412 529 8 120 2.79e-26 105
Msa0414600 AT4G13310.2 23.607 377 262 10 49 419 34 390 3.63e-25 107
Msa0414600 AT3G53290.1 26.650 409 254 12 101 503 11 379 1.02e-24 107
Msa0414600 AT3G26180.2 30.769 208 137 4 294 497 132 336 2.94e-24 104
Msa0414600 AT5G25900.1 22.062 485 341 15 52 526 50 507 1.12e-23 104
Msa0414600 AT5G61320.1 24.000 425 275 11 82 494 68 456 2.67e-22 100
Msa0414600 AT3G56630.1 22.642 477 339 14 41 506 23 480 1.16e-21 98.6
Msa0414600 AT2G45580.3 23.460 341 248 5 82 419 72 402 5.93e-21 95.5
Msa0414600 AT4G20240.2 22.715 383 267 12 42 419 30 388 5.02e-20 92.8
Msa0414600 AT1G64900.1 22.637 455 323 12 82 526 68 503 1.12e-19 92.8
Msa0414600 AT1G34540.1 21.875 480 351 13 21 492 3 466 2.07e-19 91.7
Msa0414600 AT4G39490.1 22.385 478 324 16 21 473 11 466 1.47e-18 89.4
Msa0414600 AT5G58860.1 22.958 453 296 13 48 473 32 458 2.30e-18 88.6
Msa0414600 AT1G57750.1 21.414 495 332 15 22 494 8 467 7.40e-17 84.0
Msa0414600 AT5G63450.1 27.500 240 159 6 258 492 242 471 1.21e-16 83.2
Msa0414600 AT5G63450.2 27.500 240 159 6 258 492 300 529 1.23e-16 83.6
Msa0414600 AT5G23190.1 26.378 254 163 10 234 473 247 490 3.89e-16 81.6
Msa0414600 AT4G39480.1 26.295 251 167 6 258 493 236 483 6.63e-16 80.9
Msa0414600 AT4G39500.2 24.691 243 174 4 258 493 246 486 8.50e-16 80.5
Msa0414600 AT1G13090.1 27.758 281 169 8 40 311 23 278 1.25e-15 78.2
Msa0414600 AT4G39500.1 24.691 243 174 4 258 493 196 436 1.48e-15 79.7
Msa0414600 AT5G24960.2 22.589 394 274 11 35 420 21 391 1.82e-15 79.0
Msa0414600 AT4G00360.1 21.097 474 331 15 25 473 6 461 2.67e-15 79.3
Msa0414600 AT5G08250.2 21.677 489 307 17 19 473 42 488 3.39e-15 79.0
Msa0414600 AT1G19630.1 24.528 212 146 4 296 504 256 456 4.79e-14 75.1
Msa0414600 AT5G08250.1 25.591 254 166 8 234 473 182 426 4.97e-14 75.1
Msa0414600 AT1G65340.1 21.097 474 315 17 49 493 30 473 6.69e-14 74.7
Msa0414600 AT3G53305.1 36.090 133 76 3 372 504 183 306 1.29e-13 72.8
Msa0414600 AT3G48520.1 25.000 240 166 7 258 493 240 469 2.32e-13 72.8
Msa0414600 AT3G53130.1 25.521 192 133 4 314 501 332 517 5.59e-13 72.0
Msa0414600 AT2G45560.2 21.613 310 222 10 13 317 7 300 2.32e-12 68.6
Msa0414600 AT2G32440.2 21.400 500 315 15 41 526 40 475 1.30e-11 67.4
Msa0414600 AT2G32440.1 21.400 500 315 15 41 526 40 475 1.30e-11 67.4
Msa0414600 AT1G57750.2 20.889 450 301 14 22 449 8 424 1.87e-11 66.6
Msa0414600 AT1G47620.1 21.010 495 349 17 18 493 14 485 2.42e-11 66.6
Msa0414600 AT5G52320.2 23.982 221 158 5 258 473 237 452 6.02e-11 65.5
Msa0414600 AT5G52320.1 23.982 221 158 5 258 473 237 452 6.19e-11 65.1

Find 138 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTATTTGCAAGCATTTC+AGG 0.188028 3_2:+60146590 None:intergenic
AGAGGTTCATTCCAAACTTT+TGG 0.231283 3_2:+60145346 None:intergenic
CTCAACAAAGTGGTATCTTA+TGG 0.251490 3_2:+60146673 None:intergenic
AAATATTTGAAAATTTAATA+AGG 0.264846 3_2:-60145029 Msa0414600:three_prime_UTR
GCATCAGCTGTTACACCCTT+TGG 0.271072 3_2:-60146377 Msa0414600:CDS
CGCTACTCCCTCAGTCGTTT+TGG 0.277577 3_2:-60146739 Msa0414600:CDS
ATTTCCTCTGATGTCAATAA+TGG 0.283147 3_2:+60145831 None:intergenic
TTATGTATCCACCTGGTTGC+AGG 0.291628 3_2:+60146569 None:intergenic
TATCATCAGCAAAGGTTTCT+TGG 0.295206 3_2:-60146399 Msa0414600:CDS
CATCAGCTGTTACACCCTTT+GGG 0.297203 3_2:-60146376 Msa0414600:CDS
TGATGGGTCTATGGTAGTTT+TGG 0.308095 3_2:-60145293 Msa0414600:CDS
TGTGGTTCCAAGCACAATTC+CGG 0.310189 3_2:+60145219 None:intergenic
GGTTTCGAATATCCGATTCT+TGG 0.313612 3_2:+60145527 None:intergenic
ATAAGTACATGACTACCTTT+TGG 0.314075 3_2:+60145394 None:intergenic
TTGTAATTTGATGAGGAAAT+TGG 0.325728 3_2:-60146171 Msa0414600:CDS
ATTTCTGCTATTGCAAATTC+AGG 0.332465 3_2:+60145622 None:intergenic
TAATCTTATATAACGGTGTT+TGG 0.355918 3_2:-60144998 Msa0414600:three_prime_UTR
AGTTCAATGGTTGATGCATT+AGG 0.356955 3_2:+60145142 None:intergenic
GTGCTCCATTGTTTAGTAAT+GGG 0.360583 3_2:-60144908 Msa0414600:three_prime_UTR
TATAATTCTGATGCCAATCT+TGG 0.362454 3_2:+60145061 None:intergenic
ATAACGGTGTTTGGTTAGTA+AGG 0.362672 3_2:-60144989 Msa0414600:three_prime_UTR
GAATGATGGCGGTCCTGGTT+TGG 0.378126 3_2:-60146117 Msa0414600:CDS
TTGAGAGGACTTGACTTTGA+TGG 0.381481 3_2:-60146014 Msa0414600:CDS
GTGGTTCCAAGCACAATTCC+GGG 0.391398 3_2:+60145220 None:intergenic
TCAATTCTACTATCAATGAT+TGG 0.391744 3_2:+60145939 None:intergenic
TTTGGGACCGGGTTGTAGTT+TGG 0.392240 3_2:+60146637 None:intergenic
TCGGACGAAATCCAAAAGTT+TGG 0.392283 3_2:-60145357 Msa0414600:CDS
GTTTGTTGTTTCCATCTTTG+AGG 0.394363 3_2:+60145853 None:intergenic
CATTCTTTCTCAAGAATTCA+AGG 0.405169 3_2:+60146462 None:intergenic
ACAATGACTGTGATGTTATT+AGG 0.406786 3_2:-60145199 Msa0414600:CDS
AATGATATGAACTTCAAATC+TGG 0.414952 3_2:+60145265 None:intergenic
ACCAACTATAGGCCATGGTT+TGG 0.419820 3_2:+60146619 None:intergenic
AGAATGGTCTTGTGAATGTT+AGG 0.420942 3_2:-60146214 Msa0414600:CDS
ATATCAGTGGACATGGATAT+TGG 0.427913 3_2:+60146419 None:intergenic
GCAATGGTGGGACATGTAAC+AGG 0.428152 3_2:+60146485 None:intergenic
ATCAAAGACTATTGCTGATT+CGG 0.432858 3_2:-60145901 Msa0414600:CDS
TCAGGAATATTACCAACTAT+AGG 0.437997 3_2:+60146608 None:intergenic
GGAATACTTGAGAAGTTCAA+TGG 0.443660 3_2:+60145129 None:intergenic
GGAAGGAATGATGGCGGTCC+TGG 0.444326 3_2:-60146122 Msa0414600:CDS
TCTCCCCTCACAGGCATCAA+TGG 0.445819 3_2:-60146310 Msa0414600:CDS
CCAACTATAGGCCATGGTTT+GGG 0.447196 3_2:+60146620 None:intergenic
GAAGTTCATATCATTTAGTA+CGG 0.448426 3_2:-60145257 Msa0414600:CDS
GCCAATTACATGATTCCAAA+AGG 0.452440 3_2:-60145409 Msa0414600:CDS
GGGAGTAGCGGTAGGAAACT+AGG 0.465335 3_2:+60146752 None:intergenic
AGTGCTCCATTGTTTAGTAA+TGG 0.468887 3_2:-60144909 Msa0414600:three_prime_UTR
GGCAATAGCAAAGCCAAGAT+TGG 0.469898 3_2:-60145074 Msa0414600:CDS
ATTGCCACTAGTGGCCCTCC+AGG 0.474108 3_2:+60145091 None:intergenic
GGCTTTGCTATTGCCACTAG+TGG 0.478391 3_2:+60145082 None:intergenic
ATCAATGGCTCGCAAACAAA+AGG 0.481322 3_2:-60146295 Msa0414600:CDS
TTTGTTGTTTCCATCTTTGA+GGG 0.483894 3_2:+60145854 None:intergenic
CAGGTGGATACATAAGATAA+TGG 0.486272 3_2:-60146561 Msa0414600:CDS
ATAGGCCATGGTTTGGGACC+GGG 0.487719 3_2:+60146626 None:intergenic
GGAAAATGAATCAGTAAAGA+TGG 0.489831 3_2:-60144967 Msa0414600:three_prime_UTR
GGTTGTCCCGGAATTGTGCT+TGG 0.489912 3_2:-60145226 Msa0414600:CDS
ACGGGAAGGCGTGGTTGTCC+CGG 0.492272 3_2:-60145238 Msa0414600:CDS
TATAGGCCATGGTTTGGGAC+CGG 0.492449 3_2:+60146625 None:intergenic
CATTATCTTATGTATCCACC+TGG 0.498042 3_2:+60146562 None:intergenic
AATTAATATGCAAGGTTCAA+AGG 0.500582 3_2:+60146810 None:intergenic
TAGGAGTGTAGCTCATAGCT+TGG 0.500991 3_2:+60146771 None:intergenic
TCCAATGGTGATAGATACCC+TGG 0.502264 3_2:-60145109 Msa0414600:CDS
AATAGAAGGTACTTTGGAGA+AGG 0.502612 3_2:-60146143 Msa0414600:CDS
TAATCCTCCACATGTTGCTA+TGG 0.502723 3_2:-60145446 Msa0414600:CDS
AAGTCAAGTCCTCTCAAGAA+TGG 0.507060 3_2:+60146020 None:intergenic
CAAGAATTCAAGGGCAATGG+TGG 0.514918 3_2:+60146472 None:intergenic
GAAGGTACTTTGGAGAAGGA+AGG 0.516267 3_2:-60146139 Msa0414600:CDS
GGTTGCTCCATGGATTCGAT+TGG 0.516658 3_2:-60145174 Msa0414600:CDS
CTTTGATGGTCATGAGAGAA+AGG 0.517624 3_2:-60146000 Msa0414600:CDS
TTTGAGAAAATTAATATGCA+AGG 0.518387 3_2:+60146802 None:intergenic
TCCAGGGTATCTATCACCAT+TGG 0.521137 3_2:+60145108 None:intergenic
CCCAAACCATGGCCTATAGT+TGG 0.526778 3_2:-60146620 Msa0414600:CDS
ACAACGACTAGTCCAAGAAT+CGG 0.530665 3_2:-60145539 Msa0414600:CDS
ATTGACATCAGAGGAAATCA+AGG 0.534364 3_2:-60145826 Msa0414600:CDS
ATTATTGTTGTAATTTGATG+AGG 0.538020 3_2:-60146178 Msa0414600:CDS
GACCACTCCAATCGAATCCA+TGG 0.540359 3_2:+60145167 None:intergenic
CACAAGCTTTCACATAGTTG+AGG 0.544057 3_2:+60145506 None:intergenic
TCAACGAGCCACTGAAGAGT+TGG 0.547399 3_2:-60145578 Msa0414600:CDS
GAATAACATGGACATTTCCT+AGG 0.550006 3_2:+60146507 None:intergenic
ATGAATTGTTCTCCCCTCAC+AGG 0.550585 3_2:-60146319 Msa0414600:CDS
CGAGCCATTGATGCCTGTGA+GGG 0.551166 3_2:+60146306 None:intergenic
CGTTCTGGTTTAAATTTGAG+AGG 0.551238 3_2:+60145328 None:intergenic
ATTCTTTCTCAAGAATTCAA+GGG 0.552537 3_2:+60146463 None:intergenic
TCTCAAGAATTCAAGGGCAA+TGG 0.555312 3_2:+60146469 None:intergenic
GATTATATGCCATTCTTGAG+AGG 0.557251 3_2:-60146029 Msa0414600:CDS
TTTGGAGAAGGAAGGAATGA+TGG 0.558035 3_2:-60146131 Msa0414600:CDS
ATGCAGATAATCTTATATAA+CGG 0.560380 3_2:-60145005 Msa0414600:three_prime_UTR
TTACACCCTTTGGGGAACAA+TGG 0.561271 3_2:-60146367 Msa0414600:CDS
GAACTTCTCAAGTATTCCAA+TGG 0.568654 3_2:-60145124 Msa0414600:CDS
ATCAGCTGTTACACCCTTTG+GGG 0.569284 3_2:-60146375 Msa0414600:CDS
AAGTTCATATCATTTAGTAC+GGG 0.569361 3_2:-60145256 Msa0414600:CDS
CATGTACTTATAAGCAAACA+AGG 0.569371 3_2:-60145382 Msa0414600:CDS
TAACGGTGTTTGGTTAGTAA+GGG 0.570619 3_2:-60144988 Msa0414600:three_prime_UTR
CTCCATGGATTCGATTGGAG+TGG 0.571296 3_2:-60145169 Msa0414600:CDS
TTATTAGGCAGGTTGCTCCA+TGG 0.571812 3_2:-60145184 Msa0414600:CDS
ATATTACCAACTATAGGCCA+TGG 0.576767 3_2:+60146614 None:intergenic
CAACTCCCATTACTAAACAA+TGG 0.577045 3_2:+60144903 None:intergenic
TGACTGTGATGTTATTAGGC+AGG 0.588410 3_2:-60145195 Msa0414600:CDS
GAAATAGCATGTATCCGCCT+AGG 0.589405 3_2:-60146524 Msa0414600:CDS
TAATAACATCACAGTCATTG+TGG 0.592237 3_2:+60145201 None:intergenic
GCAAATTCAGGTGCATGTGA+TGG 0.593447 3_2:+60145634 None:intergenic
TCATATCATTTAGTACGGGA+AGG 0.593898 3_2:-60145252 Msa0414600:CDS
CTTATAAGCAAACAAGGACT+CGG 0.598380 3_2:-60145376 Msa0414600:CDS
TGATGGCGGTCCTGGTTTGG+AGG 0.600181 3_2:-60146114 Msa0414600:CDS
TCCACTGATATCATCAGCAA+AGG 0.601701 3_2:-60146407 Msa0414600:CDS
TCAATGGTTGATGCATTAGG+AGG 0.603222 3_2:+60145145 None:intergenic
TGTTCAACTTCCTCCAAACC+AGG 0.606312 3_2:+60146104 None:intergenic
GAAGAGTTGGATAATGTCGT+AGG 0.607328 3_2:-60145565 Msa0414600:CDS
TCATTTAGTACGGGAAGGCG+TGG 0.607824 3_2:-60145247 Msa0414600:CDS
TTGCCACTAGTGGCCCTCCA+GGG 0.609613 3_2:+60145092 None:intergenic
TACAACCCGGTCCCAAACCA+TGG 0.612157 3_2:-60146631 Msa0414600:CDS
GCTCGCAAACAAAAGGAATG+AGG 0.613585 3_2:-60146288 Msa0414600:CDS
TGAATGTTAGGATTGTTACA+AGG 0.613912 3_2:-60146202 Msa0414600:CDS
TTCTTGCAGGAACTTGTGCT+AGG 0.615152 3_2:-60145670 Msa0414600:intron
TGGTCATGAGAGAAAGGTGA+AGG 0.615917 3_2:-60145994 Msa0414600:CDS
AAAGATGCCAAAACGACTGA+GGG 0.616713 3_2:+60146732 None:intergenic
GGAACTTGTGCTAGGTGGCG+TGG 0.617491 3_2:-60145662 Msa0414600:CDS
TTGCAAATAAACCTGCAACC+AGG 0.617699 3_2:-60146580 Msa0414600:CDS
GACATTATCCAACTCTTCAG+TGG 0.620770 3_2:+60145570 None:intergenic
TTGCAGGAACTTGTGCTAGG+TGG 0.621774 3_2:-60145667 Msa0414600:intron
CAAACCATTATTGACATCAG+AGG 0.621987 3_2:-60145835 Msa0414600:CDS
TGTTGCTATGGACAACATAG+TGG 0.626100 3_2:-60145434 Msa0414600:CDS
AAAAGATGCCAAAACGACTG+AGG 0.626245 3_2:+60146731 None:intergenic
ACCTTTGCTGATGATATCAG+TGG 0.632000 3_2:+60146406 None:intergenic
GAAGGATGCTATGAGTATTG+TGG 0.632731 3_2:-60145976 Msa0414600:CDS
GCGAGCCATTGATGCCTGTG+AGG 0.633714 3_2:+60146305 None:intergenic
ATACCCTGGAGGGCCACTAG+TGG 0.635007 3_2:-60145095 Msa0414600:CDS
GCTGATGATATCAGTGGACA+TGG 0.636477 3_2:+60146412 None:intergenic
AAGAATTCAAGGGCAATGGT+GGG 0.637514 3_2:+60146473 None:intergenic
ACGACTGAGGGAGTAGCGGT+AGG 0.645215 3_2:+60146744 None:intergenic
CAAATAAACCTGCAACCAGG+TGG 0.646620 3_2:-60146577 Msa0414600:CDS
ATGGTGATAGATACCCTGGA+GGG 0.650089 3_2:-60145105 Msa0414600:CDS
TTGTCCATAGCAACATGTGG+AGG 0.663745 3_2:+60145442 None:intergenic
ATGTTGTCCATAGCAACATG+TGG 0.667908 3_2:+60145439 None:intergenic
CAAAACGACTGAGGGAGTAG+CGG 0.674126 3_2:+60146740 None:intergenic
GAGCCATTGATGCCTGTGAG+GGG 0.718073 3_2:+60146307 None:intergenic
TAACATGGACATTTCCTAGG+CGG 0.719369 3_2:+60146510 None:intergenic
GGAGAAGGAAGGAATGATGG+CGG 0.722729 3_2:-60146128 Msa0414600:CDS
AATGGTGATAGATACCCTGG+AGG 0.740316 3_2:-60145106 Msa0414600:CDS
GACATGTAACAGGAATAACA+TGG 0.742633 3_2:+60146495 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATATTTGATGTATT+CGG - chr3_2:60146832-60146851 Msa0414600:five_prime_UTR 10.0%
!! ATAAAAATATTTGATGTATT+CGG - chr3_2:60146832-60146851 Msa0414600:five_prime_UTR 10.0%
!!! AAGGAACAATAATTTTTAAG+TGG + chr3_2:60144878-60144897 None:intergenic 20.0%
!! TTTGAGAAAATTAATATGCA+AGG + chr3_2:60144905-60144924 None:intergenic 20.0%
!! ATTATTGTTGTAATTTGATG+AGG - chr3_2:60145526-60145545 Msa0414600:CDS 20.0%
!!! TTGATAGTAGAATTGAAAAA+TGG - chr3_2:60145772-60145791 Msa0414600:intron 20.0%
!! AAAATCATTAACAACTAACA+AGG - chr3_2:60146005-60146024 Msa0414600:CDS 20.0%
!! TAAAAATTGTAATTGGATGA+AGG + chr3_2:60146240-60146259 None:intergenic 20.0%
!! ATGCAGATAATCTTATATAA+CGG - chr3_2:60146699-60146718 Msa0414600:CDS 20.0%
!!! AAGGAACAATAATTTTTAAG+TGG + chr3_2:60144878-60144897 None:intergenic 20.0%
!! TTTGAGAAAATTAATATGCA+AGG + chr3_2:60144905-60144924 None:intergenic 20.0%
!! ATTATTGTTGTAATTTGATG+AGG - chr3_2:60145526-60145545 Msa0414600:CDS 20.0%
!!! TTGATAGTAGAATTGAAAAA+TGG - chr3_2:60145772-60145791 Msa0414600:intron 20.0%
!! AAAATCATTAACAACTAACA+AGG - chr3_2:60146005-60146024 Msa0414600:CDS 20.0%
!! TAAAAATTGTAATTGGATGA+AGG + chr3_2:60146240-60146259 None:intergenic 20.0%
!! ATGCAGATAATCTTATATAA+CGG - chr3_2:60146699-60146718 Msa0414600:CDS 20.0%
! AATTAATATGCAAGGTTCAA+AGG + chr3_2:60144897-60144916 None:intergenic 25.0%
! ATTCTTTCTCAAGAATTCAA+GGG + chr3_2:60145244-60145263 None:intergenic 25.0%
! TTGTAATTTGATGAGGAAAT+TGG - chr3_2:60145533-60145552 Msa0414600:CDS 25.0%
!!! GGAAATTGGTTTTTAATAGA+AGG - chr3_2:60145547-60145566 Msa0414600:CDS 25.0%
!!! GTTTTTAATAGAAGGTACTT+TGG - chr3_2:60145555-60145574 Msa0414600:CDS 25.0%
! TCAATTCTACTATCAATGAT+TGG + chr3_2:60145768-60145787 None:intergenic 25.0%
! AGAATTGAAAAATGGAAAGA+TGG - chr3_2:60145780-60145799 Msa0414600:intron 25.0%
! GGAGGATTAAAAATTGTAAT+TGG + chr3_2:60146247-60146266 None:intergenic 25.0%
! AATGATATGAACTTCAAATC+TGG + chr3_2:60146442-60146461 None:intergenic 25.0%
! GAAGTTCATATCATTTAGTA+CGG - chr3_2:60146447-60146466 Msa0414600:CDS 25.0%
! AAGTTCATATCATTTAGTAC+GGG - chr3_2:60146448-60146467 Msa0414600:CDS 25.0%
! TAATCTTATATAACGGTGTT+TGG - chr3_2:60146706-60146725 Msa0414600:CDS 25.0%
! AATTAATATGCAAGGTTCAA+AGG + chr3_2:60144897-60144916 None:intergenic 25.0%
! ATTCTTTCTCAAGAATTCAA+GGG + chr3_2:60145244-60145263 None:intergenic 25.0%
! TTGTAATTTGATGAGGAAAT+TGG - chr3_2:60145533-60145552 Msa0414600:CDS 25.0%
!!! GGAAATTGGTTTTTAATAGA+AGG - chr3_2:60145547-60145566 Msa0414600:CDS 25.0%
!!! GTTTTTAATAGAAGGTACTT+TGG - chr3_2:60145555-60145574 Msa0414600:CDS 25.0%
! TCAATTCTACTATCAATGAT+TGG + chr3_2:60145768-60145787 None:intergenic 25.0%
! AGAATTGAAAAATGGAAAGA+TGG - chr3_2:60145780-60145799 Msa0414600:intron 25.0%
! GGAGGATTAAAAATTGTAAT+TGG + chr3_2:60146247-60146266 None:intergenic 25.0%
! AATGATATGAACTTCAAATC+TGG + chr3_2:60146442-60146461 None:intergenic 25.0%
! GAAGTTCATATCATTTAGTA+CGG - chr3_2:60146447-60146466 Msa0414600:CDS 25.0%
! AAGTTCATATCATTTAGTAC+GGG - chr3_2:60146448-60146467 Msa0414600:CDS 25.0%
! TAATCTTATATAACGGTGTT+TGG - chr3_2:60146706-60146725 Msa0414600:CDS 25.0%
!!! GTTGTAGTTTGGCTTTTTTA+GGG + chr3_2:60145059-60145078 None:intergenic 30.0%
TCAGGAATATTACCAACTAT+AGG + chr3_2:60145099-60145118 None:intergenic 30.0%
CATTCTTTCTCAAGAATTCA+AGG + chr3_2:60145245-60145264 None:intergenic 30.0%
TGCAAAAATGCAAATGAGAA+TGG - chr3_2:60145474-60145493 Msa0414600:CDS 30.0%
TGAATGTTAGGATTGTTACA+AGG - chr3_2:60145502-60145521 Msa0414600:CDS 30.0%
! ATCAAAGACTATTGCTGATT+CGG - chr3_2:60145803-60145822 Msa0414600:intron 30.0%
!! ATTTTAATCTCCCTCAAAGA+TGG - chr3_2:60145840-60145859 Msa0414600:CDS 30.0%
!! TTTGTTGTTTCCATCTTTGA+GGG + chr3_2:60145853-60145872 None:intergenic 30.0%
ATTTCCTCTGATGTCAATAA+TGG + chr3_2:60145876-60145895 None:intergenic 30.0%
TGTTTGATGCTACAATTTCT+CGG + chr3_2:60145974-60145993 None:intergenic 30.0%
AACAAGGTTAAAATTCTTGC+AGG - chr3_2:60146021-60146040 Msa0414600:CDS 30.0%
ATTTCTGCTATTGCAAATTC+AGG + chr3_2:60146085-60146104 None:intergenic 30.0%
!!! ACCTTTTGGAATCATGTAAT+TGG + chr3_2:60146299-60146318 None:intergenic 30.0%
! ATAAGTACATGACTACCTTT+TGG + chr3_2:60146313-60146332 None:intergenic 30.0%
CATGTACTTATAAGCAAACA+AGG - chr3_2:60146322-60146341 Msa0414600:CDS 30.0%
AACGCCATCTAAAAAATGAT+GGG - chr3_2:60146395-60146414 Msa0414600:CDS 30.0%
!!! TAGACCCATCATTTTTTAGA+TGG + chr3_2:60146402-60146421 None:intergenic 30.0%
!! TCTAAAAAATGATGGGTCTA+TGG - chr3_2:60146402-60146421 Msa0414600:CDS 30.0%
TAATAACATCACAGTCATTG+TGG + chr3_2:60146506-60146525 None:intergenic 30.0%
ACAATGACTGTGATGTTATT+AGG - chr3_2:60146505-60146524 Msa0414600:CDS 30.0%
TATAATTCTGATGCCAATCT+TGG + chr3_2:60146646-60146665 None:intergenic 30.0%
GGAAAATGAATCAGTAAAGA+TGG - chr3_2:60146737-60146756 Msa0414600:CDS 30.0%
!!! GTTGTAGTTTGGCTTTTTTA+GGG + chr3_2:60145059-60145078 None:intergenic 30.0%
TCAGGAATATTACCAACTAT+AGG + chr3_2:60145099-60145118 None:intergenic 30.0%
CATTCTTTCTCAAGAATTCA+AGG + chr3_2:60145245-60145264 None:intergenic 30.0%
TGCAAAAATGCAAATGAGAA+TGG - chr3_2:60145474-60145493 Msa0414600:CDS 30.0%
TGAATGTTAGGATTGTTACA+AGG - chr3_2:60145502-60145521 Msa0414600:CDS 30.0%
! ATCAAAGACTATTGCTGATT+CGG - chr3_2:60145803-60145822 Msa0414600:intron 30.0%
!! ATTTTAATCTCCCTCAAAGA+TGG - chr3_2:60145840-60145859 Msa0414600:CDS 30.0%
!! TTTGTTGTTTCCATCTTTGA+GGG + chr3_2:60145853-60145872 None:intergenic 30.0%
ATTTCCTCTGATGTCAATAA+TGG + chr3_2:60145876-60145895 None:intergenic 30.0%
TGTTTGATGCTACAATTTCT+CGG + chr3_2:60145974-60145993 None:intergenic 30.0%
AACAAGGTTAAAATTCTTGC+AGG - chr3_2:60146021-60146040 Msa0414600:CDS 30.0%
ATTTCTGCTATTGCAAATTC+AGG + chr3_2:60146085-60146104 None:intergenic 30.0%
!!! ACCTTTTGGAATCATGTAAT+TGG + chr3_2:60146299-60146318 None:intergenic 30.0%
! ATAAGTACATGACTACCTTT+TGG + chr3_2:60146313-60146332 None:intergenic 30.0%
CATGTACTTATAAGCAAACA+AGG - chr3_2:60146322-60146341 Msa0414600:CDS 30.0%
AACGCCATCTAAAAAATGAT+GGG - chr3_2:60146395-60146414 Msa0414600:CDS 30.0%
!!! TAGACCCATCATTTTTTAGA+TGG + chr3_2:60146402-60146421 None:intergenic 30.0%
!! TCTAAAAAATGATGGGTCTA+TGG - chr3_2:60146402-60146421 Msa0414600:CDS 30.0%
TAATAACATCACAGTCATTG+TGG + chr3_2:60146506-60146525 None:intergenic 30.0%
ACAATGACTGTGATGTTATT+AGG - chr3_2:60146505-60146524 Msa0414600:CDS 30.0%
TATAATTCTGATGCCAATCT+TGG + chr3_2:60146646-60146665 None:intergenic 30.0%
GGAAAATGAATCAGTAAAGA+TGG - chr3_2:60146737-60146756 Msa0414600:CDS 30.0%
CTCAACAAAGTGGTATCTTA+TGG + chr3_2:60145034-60145053 None:intergenic 35.0%
!!! TTTTAGGGTTCTCAACAAAG+TGG + chr3_2:60145044-60145063 None:intergenic 35.0%
!!! GGTTGTAGTTTGGCTTTTTT+AGG + chr3_2:60145060-60145079 None:intergenic 35.0%
AAAAAAGCCAAACTACAACC+CGG - chr3_2:60145060-60145079 Msa0414600:CDS 35.0%
ATATTACCAACTATAGGCCA+TGG + chr3_2:60145093-60145112 None:intergenic 35.0%
GGTTTATTTGCAAGCATTTC+AGG + chr3_2:60145117-60145136 None:intergenic 35.0%
CATTATCTTATGTATCCACC+TGG + chr3_2:60145145-60145164 None:intergenic 35.0%
CAGGTGGATACATAAGATAA+TGG - chr3_2:60145143-60145162 Msa0414600:CDS 35.0%
GAATAACATGGACATTTCCT+AGG + chr3_2:60145200-60145219 None:intergenic 35.0%
GACATGTAACAGGAATAACA+TGG + chr3_2:60145212-60145231 None:intergenic 35.0%
ATATCAGTGGACATGGATAT+TGG + chr3_2:60145288-60145307 None:intergenic 35.0%
TATCATCAGCAAAGGTTTCT+TGG - chr3_2:60145305-60145324 Msa0414600:CDS 35.0%
! TTTTTCCATTGTTCCCCAAA+GGG + chr3_2:60145345-60145364 None:intergenic 35.0%
!!! TTTTTTCCATTGTTCCCCAA+AGG + chr3_2:60145346-60145365 None:intergenic 35.0%
!! AGAATGGTCTTGTGAATGTT+AGG - chr3_2:60145490-60145509 Msa0414600:CDS 35.0%
!! AATAGAAGGTACTTTGGAGA+AGG - chr3_2:60145561-60145580 Msa0414600:CDS 35.0%
GATTATATGCCATTCTTGAG+AGG - chr3_2:60145675-60145694 Msa0414600:intron 35.0%
!! GTTTGTTGTTTCCATCTTTG+AGG + chr3_2:60145854-60145873 None:intergenic 35.0%
CAAACCATTATTGACATCAG+AGG - chr3_2:60145869-60145888 Msa0414600:CDS 35.0%
ATTGACATCAGAGGAAATCA+AGG - chr3_2:60145878-60145897 Msa0414600:CDS 35.0%
GCCAATTACATGATTCCAAA+AGG - chr3_2:60146295-60146314 Msa0414600:CDS 35.0%
CTTATAAGCAAACAAGGACT+CGG - chr3_2:60146328-60146347 Msa0414600:CDS 35.0%
! AGAGGTTCATTCCAAACTTT+TGG + chr3_2:60146361-60146380 None:intergenic 35.0%
!! CGTTCTGGTTTAAATTTGAG+AGG + chr3_2:60146379-60146398 None:intergenic 35.0%
!!! TCATTTTTTAGATGGCGTTC+TGG + chr3_2:60146394-60146413 None:intergenic 35.0%
GAACGCCATCTAAAAAATGA+TGG - chr3_2:60146394-60146413 Msa0414600:CDS 35.0%
TCATATCATTTAGTACGGGA+AGG - chr3_2:60146452-60146471 Msa0414600:CDS 35.0%
! AGTTCAATGGTTGATGCATT+AGG + chr3_2:60146565-60146584 None:intergenic 35.0%
GGAATACTTGAGAAGTTCAA+TGG + chr3_2:60146578-60146597 None:intergenic 35.0%
GAACTTCTCAAGTATTCCAA+TGG - chr3_2:60146580-60146599 Msa0414600:CDS 35.0%
ATAACGGTGTTTGGTTAGTA+AGG - chr3_2:60146715-60146734 Msa0414600:CDS 35.0%
TAACGGTGTTTGGTTAGTAA+GGG - chr3_2:60146716-60146735 Msa0414600:CDS 35.0%
AGTGCTCCATTGTTTAGTAA+TGG - chr3_2:60146795-60146814 Msa0414600:five_prime_UTR 35.0%
GTGCTCCATTGTTTAGTAAT+GGG - chr3_2:60146796-60146815 Msa0414600:five_prime_UTR 35.0%
CAACTCCCATTACTAAACAA+TGG + chr3_2:60146804-60146823 None:intergenic 35.0%
CTCAACAAAGTGGTATCTTA+TGG + chr3_2:60145034-60145053 None:intergenic 35.0%
!!! TTTTAGGGTTCTCAACAAAG+TGG + chr3_2:60145044-60145063 None:intergenic 35.0%
!!! GGTTGTAGTTTGGCTTTTTT+AGG + chr3_2:60145060-60145079 None:intergenic 35.0%
AAAAAAGCCAAACTACAACC+CGG - chr3_2:60145060-60145079 Msa0414600:CDS 35.0%
ATATTACCAACTATAGGCCA+TGG + chr3_2:60145093-60145112 None:intergenic 35.0%
GGTTTATTTGCAAGCATTTC+AGG + chr3_2:60145117-60145136 None:intergenic 35.0%
CATTATCTTATGTATCCACC+TGG + chr3_2:60145145-60145164 None:intergenic 35.0%
CAGGTGGATACATAAGATAA+TGG - chr3_2:60145143-60145162 Msa0414600:CDS 35.0%
GAATAACATGGACATTTCCT+AGG + chr3_2:60145200-60145219 None:intergenic 35.0%
GACATGTAACAGGAATAACA+TGG + chr3_2:60145212-60145231 None:intergenic 35.0%
ATATCAGTGGACATGGATAT+TGG + chr3_2:60145288-60145307 None:intergenic 35.0%
TATCATCAGCAAAGGTTTCT+TGG - chr3_2:60145305-60145324 Msa0414600:CDS 35.0%
! TTTTTCCATTGTTCCCCAAA+GGG + chr3_2:60145345-60145364 None:intergenic 35.0%
!!! TTTTTTCCATTGTTCCCCAA+AGG + chr3_2:60145346-60145365 None:intergenic 35.0%
!! AGAATGGTCTTGTGAATGTT+AGG - chr3_2:60145490-60145509 Msa0414600:CDS 35.0%
!! AATAGAAGGTACTTTGGAGA+AGG - chr3_2:60145561-60145580 Msa0414600:CDS 35.0%
GATTATATGCCATTCTTGAG+AGG - chr3_2:60145675-60145694 Msa0414600:intron 35.0%
!! GTTTGTTGTTTCCATCTTTG+AGG + chr3_2:60145854-60145873 None:intergenic 35.0%
CAAACCATTATTGACATCAG+AGG - chr3_2:60145869-60145888 Msa0414600:CDS 35.0%
ATTGACATCAGAGGAAATCA+AGG - chr3_2:60145878-60145897 Msa0414600:CDS 35.0%
GCCAATTACATGATTCCAAA+AGG - chr3_2:60146295-60146314 Msa0414600:CDS 35.0%
CTTATAAGCAAACAAGGACT+CGG - chr3_2:60146328-60146347 Msa0414600:CDS 35.0%
! AGAGGTTCATTCCAAACTTT+TGG + chr3_2:60146361-60146380 None:intergenic 35.0%
!! CGTTCTGGTTTAAATTTGAG+AGG + chr3_2:60146379-60146398 None:intergenic 35.0%
!!! TCATTTTTTAGATGGCGTTC+TGG + chr3_2:60146394-60146413 None:intergenic 35.0%
GAACGCCATCTAAAAAATGA+TGG - chr3_2:60146394-60146413 Msa0414600:CDS 35.0%
TCATATCATTTAGTACGGGA+AGG - chr3_2:60146452-60146471 Msa0414600:CDS 35.0%
! AGTTCAATGGTTGATGCATT+AGG + chr3_2:60146565-60146584 None:intergenic 35.0%
GGAATACTTGAGAAGTTCAA+TGG + chr3_2:60146578-60146597 None:intergenic 35.0%
GAACTTCTCAAGTATTCCAA+TGG - chr3_2:60146580-60146599 Msa0414600:CDS 35.0%
ATAACGGTGTTTGGTTAGTA+AGG - chr3_2:60146715-60146734 Msa0414600:CDS 35.0%
TAACGGTGTTTGGTTAGTAA+GGG - chr3_2:60146716-60146735 Msa0414600:CDS 35.0%
AGTGCTCCATTGTTTAGTAA+TGG - chr3_2:60146795-60146814 Msa0414600:five_prime_UTR 35.0%
GTGCTCCATTGTTTAGTAAT+GGG - chr3_2:60146796-60146815 Msa0414600:five_prime_UTR 35.0%
CAACTCCCATTACTAAACAA+TGG + chr3_2:60146804-60146823 None:intergenic 35.0%
AAAGATGCCAAAACGACTGA+GGG + chr3_2:60144975-60144994 None:intergenic 40.0%
AAAAGATGCCAAAACGACTG+AGG + chr3_2:60144976-60144995 None:intergenic 40.0%
TTGCAAATAAACCTGCAACC+AGG - chr3_2:60145124-60145143 Msa0414600:CDS 40.0%
TAACATGGACATTTCCTAGG+CGG + chr3_2:60145197-60145216 None:intergenic 40.0%
AAGAATTCAAGGGCAATGGT+GGG + chr3_2:60145234-60145253 None:intergenic 40.0%
TCTCAAGAATTCAAGGGCAA+TGG + chr3_2:60145238-60145257 None:intergenic 40.0%
TCCACTGATATCATCAGCAA+AGG - chr3_2:60145297-60145316 Msa0414600:CDS 40.0%
ACCTTTGCTGATGATATCAG+TGG + chr3_2:60145301-60145320 None:intergenic 40.0%
ATCAATGGCTCGCAAACAAA+AGG - chr3_2:60145409-60145428 Msa0414600:CDS 40.0%
TTTGGAGAAGGAAGGAATGA+TGG - chr3_2:60145573-60145592 Msa0414600:CDS 40.0%
AAGTCAAGTCCTCTCAAGAA+TGG + chr3_2:60145687-60145706 None:intergenic 40.0%
TTGAGAGGACTTGACTTTGA+TGG - chr3_2:60145690-60145709 Msa0414600:intron 40.0%
! CTTTGATGGTCATGAGAGAA+AGG - chr3_2:60145704-60145723 Msa0414600:intron 40.0%
! GAAGGATGCTATGAGTATTG+TGG - chr3_2:60145728-60145747 Msa0414600:intron 40.0%
GACATTATCCAACTCTTCAG+TGG + chr3_2:60146137-60146156 None:intergenic 40.0%
GAAGAGTTGGATAATGTCGT+AGG - chr3_2:60146139-60146158 Msa0414600:CDS 40.0%
! ACAACGACTAGTCCAAGAAT+CGG - chr3_2:60146165-60146184 Msa0414600:CDS 40.0%
GGTTTCGAATATCCGATTCT+TGG + chr3_2:60146180-60146199 None:intergenic 40.0%
CACAAGCTTTCACATAGTTG+AGG + chr3_2:60146201-60146220 None:intergenic 40.0%
TAATCCTCCACATGTTGCTA+TGG - chr3_2:60146258-60146277 Msa0414600:CDS 40.0%
ATGTTGTCCATAGCAACATG+TGG + chr3_2:60146268-60146287 None:intergenic 40.0%
TGTTGCTATGGACAACATAG+TGG - chr3_2:60146270-60146289 Msa0414600:CDS 40.0%
TCGGACGAAATCCAAAAGTT+TGG - chr3_2:60146347-60146366 Msa0414600:CDS 40.0%
!! TGATGGGTCTATGGTAGTTT+TGG - chr3_2:60146411-60146430 Msa0414600:CDS 40.0%
TGACTGTGATGTTATTAGGC+AGG - chr3_2:60146509-60146528 Msa0414600:CDS 40.0%
! TCAATGGTTGATGCATTAGG+AGG + chr3_2:60146562-60146581 None:intergenic 40.0%
AAAGATGCCAAAACGACTGA+GGG + chr3_2:60144975-60144994 None:intergenic 40.0%
AAAAGATGCCAAAACGACTG+AGG + chr3_2:60144976-60144995 None:intergenic 40.0%
TTGCAAATAAACCTGCAACC+AGG - chr3_2:60145124-60145143 Msa0414600:CDS 40.0%
TAACATGGACATTTCCTAGG+CGG + chr3_2:60145197-60145216 None:intergenic 40.0%
AAGAATTCAAGGGCAATGGT+GGG + chr3_2:60145234-60145253 None:intergenic 40.0%
TCTCAAGAATTCAAGGGCAA+TGG + chr3_2:60145238-60145257 None:intergenic 40.0%
TCCACTGATATCATCAGCAA+AGG - chr3_2:60145297-60145316 Msa0414600:CDS 40.0%
ACCTTTGCTGATGATATCAG+TGG + chr3_2:60145301-60145320 None:intergenic 40.0%
ATCAATGGCTCGCAAACAAA+AGG - chr3_2:60145409-60145428 Msa0414600:CDS 40.0%
TTTGGAGAAGGAAGGAATGA+TGG - chr3_2:60145573-60145592 Msa0414600:CDS 40.0%
AAGTCAAGTCCTCTCAAGAA+TGG + chr3_2:60145687-60145706 None:intergenic 40.0%
TTGAGAGGACTTGACTTTGA+TGG - chr3_2:60145690-60145709 Msa0414600:intron 40.0%
! CTTTGATGGTCATGAGAGAA+AGG - chr3_2:60145704-60145723 Msa0414600:intron 40.0%
! GAAGGATGCTATGAGTATTG+TGG - chr3_2:60145728-60145747 Msa0414600:intron 40.0%
GACATTATCCAACTCTTCAG+TGG + chr3_2:60146137-60146156 None:intergenic 40.0%
GAAGAGTTGGATAATGTCGT+AGG - chr3_2:60146139-60146158 Msa0414600:CDS 40.0%
! ACAACGACTAGTCCAAGAAT+CGG - chr3_2:60146165-60146184 Msa0414600:CDS 40.0%
GGTTTCGAATATCCGATTCT+TGG + chr3_2:60146180-60146199 None:intergenic 40.0%
CACAAGCTTTCACATAGTTG+AGG + chr3_2:60146201-60146220 None:intergenic 40.0%
TAATCCTCCACATGTTGCTA+TGG - chr3_2:60146258-60146277 Msa0414600:CDS 40.0%
ATGTTGTCCATAGCAACATG+TGG + chr3_2:60146268-60146287 None:intergenic 40.0%
TGTTGCTATGGACAACATAG+TGG - chr3_2:60146270-60146289 Msa0414600:CDS 40.0%
TCGGACGAAATCCAAAAGTT+TGG - chr3_2:60146347-60146366 Msa0414600:CDS 40.0%
!! TGATGGGTCTATGGTAGTTT+TGG - chr3_2:60146411-60146430 Msa0414600:CDS 40.0%
TGACTGTGATGTTATTAGGC+AGG - chr3_2:60146509-60146528 Msa0414600:CDS 40.0%
! TCAATGGTTGATGCATTAGG+AGG + chr3_2:60146562-60146581 None:intergenic 40.0%
! TAGGAGTGTAGCTCATAGCT+TGG + chr3_2:60144936-60144955 None:intergenic 45.0%
CCAACTATAGGCCATGGTTT+GGG + chr3_2:60145087-60145106 None:intergenic 45.0%
ACCAACTATAGGCCATGGTT+TGG + chr3_2:60145088-60145107 None:intergenic 45.0%
CAAATAAACCTGCAACCAGG+TGG - chr3_2:60145127-60145146 Msa0414600:CDS 45.0%
TTATGTATCCACCTGGTTGC+AGG + chr3_2:60145138-60145157 None:intergenic 45.0%
GAAATAGCATGTATCCGCCT+AGG - chr3_2:60145180-60145199 Msa0414600:CDS 45.0%
CAAGAATTCAAGGGCAATGG+TGG + chr3_2:60145235-60145254 None:intergenic 45.0%
GCTGATGATATCAGTGGACA+TGG + chr3_2:60145295-60145314 None:intergenic 45.0%
CATCAGCTGTTACACCCTTT+GGG - chr3_2:60145328-60145347 Msa0414600:CDS 45.0%
ATCAGCTGTTACACCCTTTG+GGG - chr3_2:60145329-60145348 Msa0414600:CDS 45.0%
! TTACACCCTTTGGGGAACAA+TGG - chr3_2:60145337-60145356 Msa0414600:CDS 45.0%
ATGAATTGTTCTCCCCTCAC+AGG - chr3_2:60145385-60145404 Msa0414600:CDS 45.0%
GCTCGCAAACAAAAGGAATG+AGG - chr3_2:60145416-60145435 Msa0414600:CDS 45.0%
!! GAAGGTACTTTGGAGAAGGA+AGG - chr3_2:60145565-60145584 Msa0414600:CDS 45.0%
TGTTCAACTTCCTCCAAACC+AGG + chr3_2:60145603-60145622 None:intergenic 45.0%
TGGTCATGAGAGAAAGGTGA+AGG - chr3_2:60145710-60145729 Msa0414600:intron 45.0%
TTCTTGCAGGAACTTGTGCT+AGG - chr3_2:60146034-60146053 Msa0414600:CDS 45.0%
GCAAATTCAGGTGCATGTGA+TGG + chr3_2:60146073-60146092 None:intergenic 45.0%
TTGTCCATAGCAACATGTGG+AGG + chr3_2:60146265-60146284 None:intergenic 45.0%
TGTGGTTCCAAGCACAATTC+CGG + chr3_2:60146488-60146507 None:intergenic 45.0%
TTATTAGGCAGGTTGCTCCA+TGG - chr3_2:60146520-60146539 Msa0414600:CDS 45.0%
TCCAATGGTGATAGATACCC+TGG - chr3_2:60146595-60146614 Msa0414600:CDS 45.0%
! TCCAGGGTATCTATCACCAT+TGG + chr3_2:60146599-60146618 None:intergenic 45.0%
AATGGTGATAGATACCCTGG+AGG - chr3_2:60146598-60146617 Msa0414600:CDS 45.0%
ATGGTGATAGATACCCTGGA+GGG - chr3_2:60146599-60146618 Msa0414600:CDS 45.0%
GGCAATAGCAAAGCCAAGAT+TGG - chr3_2:60146630-60146649 Msa0414600:CDS 45.0%
! TAGGAGTGTAGCTCATAGCT+TGG + chr3_2:60144936-60144955 None:intergenic 45.0%
CCAACTATAGGCCATGGTTT+GGG + chr3_2:60145087-60145106 None:intergenic 45.0%
ACCAACTATAGGCCATGGTT+TGG + chr3_2:60145088-60145107 None:intergenic 45.0%
CAAATAAACCTGCAACCAGG+TGG - chr3_2:60145127-60145146 Msa0414600:CDS 45.0%
TTATGTATCCACCTGGTTGC+AGG + chr3_2:60145138-60145157 None:intergenic 45.0%
GAAATAGCATGTATCCGCCT+AGG - chr3_2:60145180-60145199 Msa0414600:CDS 45.0%
CAAGAATTCAAGGGCAATGG+TGG + chr3_2:60145235-60145254 None:intergenic 45.0%
GCTGATGATATCAGTGGACA+TGG + chr3_2:60145295-60145314 None:intergenic 45.0%
CATCAGCTGTTACACCCTTT+GGG - chr3_2:60145328-60145347 Msa0414600:CDS 45.0%
ATCAGCTGTTACACCCTTTG+GGG - chr3_2:60145329-60145348 Msa0414600:CDS 45.0%
! TTACACCCTTTGGGGAACAA+TGG - chr3_2:60145337-60145356 Msa0414600:CDS 45.0%
ATGAATTGTTCTCCCCTCAC+AGG - chr3_2:60145385-60145404 Msa0414600:CDS 45.0%
GCTCGCAAACAAAAGGAATG+AGG - chr3_2:60145416-60145435 Msa0414600:CDS 45.0%
!! GAAGGTACTTTGGAGAAGGA+AGG - chr3_2:60145565-60145584 Msa0414600:CDS 45.0%
TGTTCAACTTCCTCCAAACC+AGG + chr3_2:60145603-60145622 None:intergenic 45.0%
TGGTCATGAGAGAAAGGTGA+AGG - chr3_2:60145710-60145729 Msa0414600:intron 45.0%
TTCTTGCAGGAACTTGTGCT+AGG - chr3_2:60146034-60146053 Msa0414600:CDS 45.0%
GCAAATTCAGGTGCATGTGA+TGG + chr3_2:60146073-60146092 None:intergenic 45.0%
TTGTCCATAGCAACATGTGG+AGG + chr3_2:60146265-60146284 None:intergenic 45.0%
TGTGGTTCCAAGCACAATTC+CGG + chr3_2:60146488-60146507 None:intergenic 45.0%
TTATTAGGCAGGTTGCTCCA+TGG - chr3_2:60146520-60146539 Msa0414600:CDS 45.0%
TCCAATGGTGATAGATACCC+TGG - chr3_2:60146595-60146614 Msa0414600:CDS 45.0%
! TCCAGGGTATCTATCACCAT+TGG + chr3_2:60146599-60146618 None:intergenic 45.0%
AATGGTGATAGATACCCTGG+AGG - chr3_2:60146598-60146617 Msa0414600:CDS 45.0%
ATGGTGATAGATACCCTGGA+GGG - chr3_2:60146599-60146618 Msa0414600:CDS 45.0%
GGCAATAGCAAAGCCAAGAT+TGG - chr3_2:60146630-60146649 Msa0414600:CDS 45.0%
!! TAAAACTAAAAAATATAATA+AGG + chr3_2:60144999-60145018 None:intergenic 5.0%
!!! TATTATATTTTTTAGTTTTA+TGG - chr3_2:60144999-60145018 Msa0414600:three_prime_UTR 5.0%
!!! TTAAATTTTCAAATATTTTA+TGG + chr3_2:60146673-60146692 None:intergenic 5.0%
!! AAATATTTGAAAATTTAATA+AGG - chr3_2:60146675-60146694 Msa0414600:CDS 5.0%
!! TAAAACTAAAAAATATAATA+AGG + chr3_2:60144999-60145018 None:intergenic 5.0%
!!! TATTATATTTTTTAGTTTTA+TGG - chr3_2:60144999-60145018 Msa0414600:three_prime_UTR 5.0%
!!! TTAAATTTTCAAATATTTTA+TGG + chr3_2:60146673-60146692 None:intergenic 5.0%
!! AAATATTTGAAAATTTAATA+AGG - chr3_2:60146675-60146694 Msa0414600:CDS 5.0%
CAAAACGACTGAGGGAGTAG+CGG + chr3_2:60144967-60144986 None:intergenic 50.0%
! TTTGGGACCGGGTTGTAGTT+TGG + chr3_2:60145070-60145089 None:intergenic 50.0%
! TATAGGCCATGGTTTGGGAC+CGG + chr3_2:60145082-60145101 None:intergenic 50.0%
CCCAAACCATGGCCTATAGT+TGG - chr3_2:60145084-60145103 Msa0414600:CDS 50.0%
! GCAATGGTGGGACATGTAAC+AGG + chr3_2:60145222-60145241 None:intergenic 50.0%
GCATCAGCTGTTACACCCTT+TGG - chr3_2:60145327-60145346 Msa0414600:CDS 50.0%
GGAGAAGGAAGGAATGATGG+CGG - chr3_2:60145576-60145595 Msa0414600:CDS 50.0%
TTGCAGGAACTTGTGCTAGG+TGG - chr3_2:60146037-60146056 Msa0414600:CDS 50.0%
TCAACGAGCCACTGAAGAGT+TGG - chr3_2:60146126-60146145 Msa0414600:CDS 50.0%
TCATTTAGTACGGGAAGGCG+TGG - chr3_2:60146457-60146476 Msa0414600:CDS 50.0%
GTGGTTCCAAGCACAATTCC+GGG + chr3_2:60146487-60146506 None:intergenic 50.0%
GGTTGCTCCATGGATTCGAT+TGG - chr3_2:60146530-60146549 Msa0414600:CDS 50.0%
CTCCATGGATTCGATTGGAG+TGG - chr3_2:60146535-60146554 Msa0414600:CDS 50.0%
GACCACTCCAATCGAATCCA+TGG + chr3_2:60146540-60146559 None:intergenic 50.0%
!! GGCTTTGCTATTGCCACTAG+TGG + chr3_2:60146625-60146644 None:intergenic 50.0%
CAAAACGACTGAGGGAGTAG+CGG + chr3_2:60144967-60144986 None:intergenic 50.0%
! TTTGGGACCGGGTTGTAGTT+TGG + chr3_2:60145070-60145089 None:intergenic 50.0%
! TATAGGCCATGGTTTGGGAC+CGG + chr3_2:60145082-60145101 None:intergenic 50.0%
CCCAAACCATGGCCTATAGT+TGG - chr3_2:60145084-60145103 Msa0414600:CDS 50.0%
! GCAATGGTGGGACATGTAAC+AGG + chr3_2:60145222-60145241 None:intergenic 50.0%
GCATCAGCTGTTACACCCTT+TGG - chr3_2:60145327-60145346 Msa0414600:CDS 50.0%
GGAGAAGGAAGGAATGATGG+CGG - chr3_2:60145576-60145595 Msa0414600:CDS 50.0%
TTGCAGGAACTTGTGCTAGG+TGG - chr3_2:60146037-60146056 Msa0414600:CDS 50.0%
TCAACGAGCCACTGAAGAGT+TGG - chr3_2:60146126-60146145 Msa0414600:CDS 50.0%
TCATTTAGTACGGGAAGGCG+TGG - chr3_2:60146457-60146476 Msa0414600:CDS 50.0%
GTGGTTCCAAGCACAATTCC+GGG + chr3_2:60146487-60146506 None:intergenic 50.0%
GGTTGCTCCATGGATTCGAT+TGG - chr3_2:60146530-60146549 Msa0414600:CDS 50.0%
CTCCATGGATTCGATTGGAG+TGG - chr3_2:60146535-60146554 Msa0414600:CDS 50.0%
GACCACTCCAATCGAATCCA+TGG + chr3_2:60146540-60146559 None:intergenic 50.0%
!! GGCTTTGCTATTGCCACTAG+TGG + chr3_2:60146625-60146644 None:intergenic 50.0%
GGGAGTAGCGGTAGGAAACT+AGG + chr3_2:60144955-60144974 None:intergenic 55.0%
! CGCTACTCCCTCAGTCGTTT+TGG - chr3_2:60144965-60144984 Msa0414600:three_prime_UTR 55.0%
TACAACCCGGTCCCAAACCA+TGG - chr3_2:60145073-60145092 Msa0414600:CDS 55.0%
! ATAGGCCATGGTTTGGGACC+GGG + chr3_2:60145081-60145100 None:intergenic 55.0%
TCTCCCCTCACAGGCATCAA+TGG - chr3_2:60145394-60145413 Msa0414600:CDS 55.0%
GAGCCATTGATGCCTGTGAG+GGG + chr3_2:60145400-60145419 None:intergenic 55.0%
CGAGCCATTGATGCCTGTGA+GGG + chr3_2:60145401-60145420 None:intergenic 55.0%
!! GAATGATGGCGGTCCTGGTT+TGG - chr3_2:60145587-60145606 Msa0414600:CDS 55.0%
GGTTGTCCCGGAATTGTGCT+TGG - chr3_2:60146478-60146497 Msa0414600:CDS 55.0%
GGGAGTAGCGGTAGGAAACT+AGG + chr3_2:60144955-60144974 None:intergenic 55.0%
! CGCTACTCCCTCAGTCGTTT+TGG - chr3_2:60144965-60144984 Msa0414600:three_prime_UTR 55.0%
TACAACCCGGTCCCAAACCA+TGG - chr3_2:60145073-60145092 Msa0414600:CDS 55.0%
! ATAGGCCATGGTTTGGGACC+GGG + chr3_2:60145081-60145100 None:intergenic 55.0%
TCTCCCCTCACAGGCATCAA+TGG - chr3_2:60145394-60145413 Msa0414600:CDS 55.0%
GAGCCATTGATGCCTGTGAG+GGG + chr3_2:60145400-60145419 None:intergenic 55.0%
CGAGCCATTGATGCCTGTGA+GGG + chr3_2:60145401-60145420 None:intergenic 55.0%
!! GAATGATGGCGGTCCTGGTT+TGG - chr3_2:60145587-60145606 Msa0414600:CDS 55.0%
GGTTGTCCCGGAATTGTGCT+TGG - chr3_2:60146478-60146497 Msa0414600:CDS 55.0%
ACGACTGAGGGAGTAGCGGT+AGG + chr3_2:60144963-60144982 None:intergenic 60.0%
GCGAGCCATTGATGCCTGTG+AGG + chr3_2:60145402-60145421 None:intergenic 60.0%
!! GGAAGGAATGATGGCGGTCC+TGG - chr3_2:60145582-60145601 Msa0414600:CDS 60.0%
!! TGATGGCGGTCCTGGTTTGG+AGG - chr3_2:60145590-60145609 Msa0414600:CDS 60.0%
GGAACTTGTGCTAGGTGGCG+TGG - chr3_2:60146042-60146061 Msa0414600:CDS 60.0%
ATACCCTGGAGGGCCACTAG+TGG - chr3_2:60146609-60146628 Msa0414600:CDS 60.0%
TTGCCACTAGTGGCCCTCCA+GGG + chr3_2:60146615-60146634 None:intergenic 60.0%
ATTGCCACTAGTGGCCCTCC+AGG + chr3_2:60146616-60146635 None:intergenic 60.0%
ACGACTGAGGGAGTAGCGGT+AGG + chr3_2:60144963-60144982 None:intergenic 60.0%
GCGAGCCATTGATGCCTGTG+AGG + chr3_2:60145402-60145421 None:intergenic 60.0%
!! GGAAGGAATGATGGCGGTCC+TGG - chr3_2:60145582-60145601 Msa0414600:CDS 60.0%
!! TGATGGCGGTCCTGGTTTGG+AGG - chr3_2:60145590-60145609 Msa0414600:CDS 60.0%
GGAACTTGTGCTAGGTGGCG+TGG - chr3_2:60146042-60146061 Msa0414600:CDS 60.0%
ATACCCTGGAGGGCCACTAG+TGG - chr3_2:60146609-60146628 Msa0414600:CDS 60.0%
TTGCCACTAGTGGCCCTCCA+GGG + chr3_2:60146615-60146634 None:intergenic 60.0%
ATTGCCACTAGTGGCCCTCC+AGG + chr3_2:60146616-60146635 None:intergenic 60.0%
! ACGGGAAGGCGTGGTTGTCC+CGG - chr3_2:60146466-60146485 Msa0414600:CDS 65.0%
! ACGGGAAGGCGTGGTTGTCC+CGG - chr3_2:60146466-60146485 Msa0414600:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 60144871 60146855 60144871 ID=Msa0414600;Name=Msa0414600
chr3_2 mRNA 60144871 60146855 60144871 ID=Msa0414600-mRNA-1;Parent=Msa0414600;Name=Msa0414600-mRNA-1;_AED=0.34;_eAED=0.34;_QI=69|1|1|1|1|1|2|180|534
chr3_2 exon 60144871 60145683 60144871 ID=Msa0414600-mRNA-1:exon:12535;Parent=Msa0414600-mRNA-1
chr3_2 exon 60145815 60146855 60145815 ID=Msa0414600-mRNA-1:exon:12534;Parent=Msa0414600-mRNA-1
chr3_2 five_prime_UTR 60146787 60146855 60146787 ID=Msa0414600-mRNA-1:five_prime_utr;Parent=Msa0414600-mRNA-1
chr3_2 CDS 60145815 60146786 60145815 ID=Msa0414600-mRNA-1:cds;Parent=Msa0414600-mRNA-1
chr3_2 CDS 60145051 60145683 60145051 ID=Msa0414600-mRNA-1:cds;Parent=Msa0414600-mRNA-1
chr3_2 three_prime_UTR 60144871 60145050 60144871 ID=Msa0414600-mRNA-1:three_prime_utr;Parent=Msa0414600-mRNA-1
Gene Sequence

>Msa0414600

ATGAGCTACACTCCTAGTTTCCTACCGCTACTCCCTCAGTCGTTTTGGCATCTTTTCCTTATTATATTTTTTAGTTTTATGGTAATCAAAACCATAAGATACCACTTTGTTGAGAACCCTAAAAAAGCCAAACTACAACCCGGTCCCAAACCATGGCCTATAGTTGGTAATATTCCTGAAATGCTTGCAAATAAACCTGCAACCAGGTGGATACATAAGATAATGGAAGAATTGAACACTGAAATAGCATGTATCCGCCTAGGAAATGTCCATGTTATTCCTGTTACATGTCCCACCATTGCCCTTGAATTCTTGAGAAAGAATGATGCTACTTTTGCATCAAGACCAATATCCATGTCCACTGATATCATCAGCAAAGGTTTCTTGGCATCAGCTGTTACACCCTTTGGGGAACAATGGAAAAAAATGAAAAAAATATTTGTCAATGAATTGTTCTCCCCTCACAGGCATCAATGGCTCGCAAACAAAAGGAATGAGGAAGCTGATAACATAATGTTTTATGTCTACAACAAATGCAAAAATGCAAATGAGAATGGTCTTGTGAATGTTAGGATTGTTACAAGGCATTATTGTTGTAATTTGATGAGGAAATTGGTTTTTAATAGAAGGTACTTTGGAGAAGGAAGGAATGATGGCGGTCCTGGTTTGGAGGAAGTTGAACATGTAGATGCTATTTTCACATTGCTTAGATATGTTTTTGCATTTTGTGTTTCTGATTATATGCCATTCTTGAGAGGACTTGACTTTGATGGTCATGAGAGAAAGGTGAAGGATGCTATGAGTATTGTGGACAAGTATAATGATCCAATCATTGATAGTAGAATTGAAAAATGGAAAGATGGATCAAAGACTATTGCTGATTCGGAAGACTTACTTGATATTTTAATCTCCCTCAAAGATGGAAACAACAAACCATTATTGACATCAGAGGAAATCAAGGCTCAAGCTCTAGAACTTGTGCTAGGTGGCGTGGACAATCCATCACATGCACCTGAATTTGCAATAGCAGAAATGATAAATCAGCAAGATTTACTTCAACGAGCCACTGAAGAGTTGGATAATGTCGTAGGAAAACAACGACTAGTCCAAGAATCGGATATTCGAAACCTCAACTATGTGAAAGCTTGTGCAAAAGAAGCTTTTCGCCTTCATCCAATTACAATTTTTAATCCTCCACATGTTGCTATGGACAACATAGTGGTTGCCAATTACATGATTCCAAAAGGTAGTCATGTACTTATAAGCAAACAAGGACTCGGACGAAATCCAAAAGTTTGGAATGAACCTCTCAAATTTAAACCAGAACGCCATCTAAAAAATGATGGGTCTATGGTAGTTTTGGCAGAACCAGATTTGAAGTTCATATCATTTAGTACGGGAAGGCGTGGTTGTCCCGGAATTGTGCTTGGAACCACAATGACTGTGATGTTATTAGGCAGGTTGCTCCATGGATTCGATTGGAGTGGTCCTCCTAATGCATCAACCATTGAACTTCTCAAGTATTCCAATGGTGATAGATACCCTGGAGGGCCACTAGTGGCAATAGCAAAGCCAAGATTGGCATCAGAATTATATCATCCATAA
Protein sequence

>Msa0414600

MSYTPSFLPLLPQSFWHLFLIIFFSFMVIKTIRYHFVENPKKAKLQPGPKPWPIVGNIPEMLANKPATRWIHKIMEELNTEIACIRLGNVHVIPVTCPTIALEFLRKNDATFASRPISMSTDIISKGFLASAVTPFGEQWKKMKKIFVNELFSPHRHQWLANKRNEEADNIMFYVYNKCKNANENGLVNVRIVTRHYCCNLMRKLVFNRRYFGEGRNDGGPGLEEVEHVDAIFTLLRYVFAFCVSDYMPFLRGLDFDGHERKVKDAMSIVDKYNDPIIDSRIEKWKDGSKTIADSEDLLDILISLKDGNNKPLLTSEEIKAQALELVLGGVDNPSHAPEFAIAEMINQQDLLQRATEELDNVVGKQRLVQESDIRNLNYVKACAKEAFRLHPITIFNPPHVAMDNIVVANYMIPKGSHVLISKQGLGRNPKVWNEPLKFKPERHLKNDGSMVVLAEPDLKFISFSTGRRGCPGIVLGTTMTVMLLGRLLHGFDWSGPPNASTIELLKYSNGDRYPGGPLVAIAKPRLASELYHP*