AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0414610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414610 MtrunA17_Chr3g0107611 92.193 538 42 0 1 538 1 538 0.0 1043
Msa0414610 MtrunA17_Chr3g0107541 67.598 537 168 3 1 537 1 531 0.0 727
Msa0414610 MtrunA17_Chr8g0370651 59.004 522 211 2 16 537 10 528 0.0 648
Msa0414610 MtrunA17_Chr8g0370641 57.306 527 219 4 12 537 3 524 0.0 636
Msa0414610 MtrunA17_Chr3g0107561 70.717 321 89 2 6 326 1 316 1.80e-168 480
Msa0414610 MtrunA17_Chr3g0105751 66.450 307 97 3 24 329 20 321 6.52e-149 432
Msa0414610 MtrunA17_Chr3g0107581 88.816 152 14 1 80 231 1 149 2.20e-97 291
Msa0414610 MtrunA17_Chr3g0107551 65.385 208 71 1 330 537 4 210 5.70e-94 285
Msa0414610 MtrunA17_Chr7g0254641 34.043 517 317 10 33 537 16 520 4.80e-93 293
Msa0414610 MtrunA17_Chr3g0105761 62.319 207 75 2 332 538 1 204 3.13e-87 268
Msa0414610 MtrunA17_Chr8g0344151 30.972 494 322 11 47 537 33 510 1.52e-71 237
Msa0414610 MtrunA17_Chr8g0344191 30.843 522 336 13 19 537 45 544 2.60e-71 237
Msa0414610 MtrunA17_Chr7g0255531 30.134 521 337 10 23 537 3 502 4.24e-70 233
Msa0414610 MtrunA17_Chr3g0086651 31.557 488 309 8 59 537 41 512 7.48e-69 230
Msa0414610 MtrunA17_Chr3g0086661 31.557 488 309 8 59 537 41 512 1.45e-68 229
Msa0414610 MtrunA17_Chr8g0344181 31.452 496 317 12 47 537 35 512 3.09e-68 228
Msa0414610 MtrunA17_Chr3g0094171 28.952 525 354 9 16 537 5 513 2.10e-67 226
Msa0414610 MtrunA17_Chr5g0403351 29.243 489 314 10 23 502 7 472 2.32e-65 221
Msa0414610 MtrunA17_Chr1g0200961 30.801 487 308 9 27 506 6 470 7.60e-65 219
Msa0414610 MtrunA17_Chr8g0372341 53.500 200 93 0 16 215 10 209 1.72e-64 209
Msa0414610 MtrunA17_Chr2g0310381 28.067 481 326 7 23 502 1 462 2.66e-64 218
Msa0414610 MtrunA17_Chr4g0061381 31.084 489 308 8 59 537 40 509 5.63e-64 217
Msa0414610 MtrunA17_Chr6g0484811 29.637 496 316 11 24 510 11 482 7.67e-64 216
Msa0414610 MtrunA17_Chr6g0484841 29.474 475 297 10 39 502 26 473 9.68e-64 216
Msa0414610 MtrunA17_Chr8g0382901 29.718 461 295 9 46 502 488 923 2.37e-63 223
Msa0414610 MtrunA17_Chr8g0382901 28.067 481 307 8 24 502 1 444 6.93e-60 213
Msa0414610 MtrunA17_Chr2g0310391 27.235 481 330 7 23 502 1 462 2.40e-63 215
Msa0414610 MtrunA17_Chr4g0057001 29.470 509 334 11 33 537 33 520 8.73e-63 214
Msa0414610 MtrunA17_Chr1g0174461 28.864 537 324 13 18 532 5 505 1.72e-62 213
Msa0414610 MtrunA17_Chr3g0116681 28.489 523 339 14 16 530 7 502 2.24e-62 213
Msa0414610 MtrunA17_Chr8g0339311 29.693 522 341 8 32 537 16 527 1.52e-61 211
Msa0414610 MtrunA17_Chr3g0086691 29.545 484 324 7 59 537 41 512 3.43e-61 210
Msa0414610 MtrunA17_Chr4g0053621 26.531 490 327 9 16 499 1 463 7.18e-61 209
Msa0414610 MtrunA17_Chr7g0235551 30.242 496 306 13 18 499 5 474 7.52e-61 209
Msa0414610 MtrunA17_Chr3g0101661 29.508 488 311 8 23 502 11 473 3.15e-60 207
Msa0414610 MtrunA17_Chr3g0101731 27.833 503 333 10 13 510 1 478 7.09e-60 206
Msa0414610 MtrunA17_Chr8g0362481 30.310 452 284 11 92 532 5 436 9.09e-60 204
Msa0414610 MtrunA17_Chr6g0466331 28.717 491 321 9 19 502 2 470 9.98e-60 206
Msa0414610 MtrunA17_Chr1g0174441 27.788 547 363 13 2 534 1 529 1.02e-59 206
Msa0414610 MtrunA17_Chr6g0465511 28.717 491 321 9 19 502 2 470 2.10e-59 205
Msa0414610 MtrunA17_Chr3g0094231 27.902 491 330 8 50 537 36 505 2.19e-59 204
Msa0414610 MtrunA17_Chr3g0101611 29.374 463 293 11 45 499 33 469 2.34e-59 204
Msa0414610 MtrunA17_Chr6g0451781 28.740 508 344 10 38 537 64 561 2.76e-59 206
Msa0414610 MtrunA17_Chr5g0445461 29.495 495 314 10 23 510 11 477 2.98e-59 204
Msa0414610 MtrunA17_Chr3g0116741 27.755 490 325 8 25 509 26 491 3.48e-59 204
Msa0414610 MtrunA17_Chr3g0101701 29.675 492 306 10 23 502 11 474 4.92e-59 204
Msa0414610 MtrunA17_Chr6g0451751 28.287 502 344 8 44 537 35 528 6.46e-59 204
Msa0414610 MtrunA17_Chr8g0372591 61.806 144 54 1 329 471 1 144 8.66e-59 191
Msa0414610 MtrunA17_Chr2g0314721 28.952 525 332 13 7 527 3 490 1.01e-58 202
Msa0414610 MtrunA17_Chr3g0084921 28.977 528 331 16 23 532 10 511 1.21e-58 203
Msa0414610 MtrunA17_Chr3g0082701 29.236 537 360 11 13 537 1 529 1.81e-58 203
Msa0414610 MtrunA17_Chr8g0361471 28.310 491 323 9 19 502 2 470 1.92e-58 202
Msa0414610 MtrunA17_Chr7g0224551 31.656 477 276 15 46 502 27 473 2.12e-58 202
Msa0414610 MtrunA17_Chr1g0174471 28.513 491 321 13 18 499 20 489 1.03e-57 201
Msa0414610 MtrunA17_Chr4g0058201 28.657 499 322 11 41 530 19 492 1.15e-57 200
Msa0414610 MtrunA17_Chr4g0047631 26.128 532 352 13 12 528 4 509 1.32e-57 200
Msa0414610 MtrunA17_Chr5g0395331 28.571 476 312 11 27 499 20 470 1.55e-57 200
Msa0414610 MtrunA17_Chr8g0356001 27.439 492 327 9 16 499 3 472 1.95e-57 199
Msa0414610 MtrunA17_Chr8g0362701 28.480 467 318 9 73 534 52 507 2.01e-57 199
Msa0414610 MtrunA17_Chr5g0395321 29.268 492 298 12 19 499 11 463 2.13e-57 200
Msa0414610 MtrunA17_Chr4g0058231 25.919 517 350 10 23 528 1 495 2.43e-57 199
Msa0414610 MtrunA17_Chr4g0008101 27.593 511 338 9 44 537 33 528 2.89e-57 199
Msa0414610 MtrunA17_Chr6g0466901 27.466 517 365 8 26 537 10 521 3.43e-57 199
Msa0414610 MtrunA17_Chr2g0304871 28.226 496 335 12 49 536 36 518 6.48e-57 198
Msa0414610 MtrunA17_Chr5g0445441 27.755 490 329 8 23 510 52 518 1.00e-56 198
Msa0414610 MtrunA17_Chr8g0390881 27.455 499 326 11 23 510 8 481 1.27e-56 197
Msa0414610 MtrunA17_Chr5g0446161 29.026 503 303 14 23 506 6 473 1.64e-56 197
Msa0414610 MtrunA17_Chr5g0401681 27.835 485 313 13 22 499 5 459 2.08e-56 196
Msa0414610 MtrunA17_Chr7g0224561 31.237 477 278 15 46 502 27 473 2.19e-56 197
Msa0414610 MtrunA17_Chr1g0176831 28.131 519 320 12 20 527 33 509 2.40e-56 197
Msa0414610 MtrunA17_Chr5g0403331 27.237 503 330 11 20 510 3 481 2.59e-56 196
Msa0414610 MtrunA17_Chr4g0052881 28.707 526 330 14 13 531 4 491 5.48e-56 195
Msa0414610 MtrunA17_Chr4g0046631 26.547 501 337 12 48 537 43 523 6.54e-56 196
Msa0414610 MtrunA17_Chr3g0101601 28.656 506 314 12 20 514 8 477 8.02e-56 195
Msa0414610 MtrunA17_Chr4g0047691 26.616 526 343 14 18 528 15 512 9.69e-56 195
Msa0414610 MtrunA17_Chr5g0431641 27.054 499 335 7 14 510 6 477 1.12e-55 194
Msa0414610 MtrunA17_Chr3g0101711 28.049 492 313 10 23 502 11 473 2.02e-55 194
Msa0414610 MtrunA17_Chr1g0174451 27.519 516 349 13 23 532 10 506 2.10e-55 194
Msa0414610 MtrunA17_Chr4g0056951 28.698 453 306 8 87 537 78 515 2.58e-55 194
Msa0414610 MtrunA17_Chr4g0052861 27.863 524 340 15 11 531 2 490 3.57e-55 193
Msa0414610 MtrunA17_Chr4g0030711 29.279 444 284 10 70 499 54 481 3.57e-55 194
Msa0414610 MtrunA17_Chr5g0430101 27.530 494 317 14 24 506 11 474 4.60e-55 193
Msa0414610 MtrunA17_Chr3g0101651 28.226 496 308 12 23 502 11 474 6.94e-55 192
Msa0414610 MtrunA17_Chr8g0355961 27.642 492 326 9 16 499 3 472 8.52e-55 192
Msa0414610 MtrunA17_Chr4g0047641 26.347 501 341 11 18 510 13 493 8.99e-55 192
Msa0414610 MtrunA17_Chr4g0035921 27.634 503 323 12 23 510 14 490 9.10e-55 192
Msa0414610 MtrunA17_Chr5g0445451 27.347 490 331 6 23 510 11 477 1.10e-54 192
Msa0414610 MtrunA17_Chr5g0405001 28.364 483 296 13 46 510 40 490 1.18e-54 192
Msa0414610 MtrunA17_Chr4g0047661 26.046 526 356 13 16 528 9 514 1.21e-54 192
Msa0414610 MtrunA17_Chr7g0258221 26.476 525 352 12 18 532 5 505 1.26e-54 192
Msa0414610 MtrunA17_Chr3g0101671 28.600 493 324 10 25 510 11 482 1.47e-54 192
Msa0414610 MtrunA17_Chr6g0466941 28.625 531 351 13 15 537 12 522 1.83e-54 192
Msa0414610 MtrunA17_Chr4g0030701 29.399 466 289 12 51 499 36 478 2.44e-54 191
Msa0414610 MtrunA17_Chr5g0445381 27.912 498 324 12 22 510 37 508 4.46e-54 191
Msa0414610 MtrunA17_Chr4g0058261 28.540 459 298 12 52 502 64 500 4.63e-54 191
Msa0414610 MtrunA17_Chr5g0430031 26.815 496 320 12 24 506 12 477 7.11e-54 190
Msa0414610 MtrunA17_Chr1g0174481 28.866 485 320 13 19 499 5 468 7.59e-54 190
Msa0414610 MtrunA17_Chr6g0451741 26.040 553 386 10 2 537 4 550 1.23e-53 190
Msa0414610 MtrunA17_Chr5g0395381 28.016 489 283 11 19 499 11 438 1.52e-53 188
Msa0414610 MtrunA17_Chr6g0472311 24.723 542 363 14 12 532 1 518 2.41e-53 189
Msa0414610 MtrunA17_Chr8g0372251 27.673 477 308 11 46 510 31 482 2.84e-53 188
Msa0414610 MtrunA17_Chr5g0401691 25.625 480 330 10 21 499 23 476 2.94e-53 188
Msa0414610 MtrunA17_Chr5g0431671 27.079 469 318 6 44 510 32 478 3.16e-53 188
Msa0414610 MtrunA17_Chr5g0446151 29.211 469 289 12 48 506 39 474 6.74e-53 187
Msa0414610 MtrunA17_Chr7g0246221 27.027 481 329 7 23 499 7 469 8.35e-53 187
Msa0414610 MtrunA17_Chr5g0445531 27.489 462 311 6 50 510 38 476 1.04e-52 186
Msa0414610 MtrunA17_Chr5g0431501 26.327 490 335 10 50 532 33 503 2.59e-52 186
Msa0414610 MtrunA17_Chr5g0431461 26.327 490 335 10 50 532 33 503 2.59e-52 186
Msa0414610 MtrunA17_Chr3g0101631 28.106 491 312 10 20 502 8 465 2.78e-52 185
Msa0414610 MtrunA17_Chr4g0058281 27.551 490 315 11 25 502 21 482 3.31e-52 186
Msa0414610 MtrunA17_Chr1g0207841 28.767 438 283 9 76 499 58 480 4.22e-52 186
Msa0414610 MtrunA17_Chr5g0430081 26.815 496 320 13 24 506 10 475 4.91e-52 185
Msa0414610 MtrunA17_Chr2g0314731 27.344 512 333 11 20 527 3 479 6.54e-52 184
Msa0414610 MtrunA17_Chr2g0296651 26.078 487 331 9 13 499 2 459 1.25e-51 184
Msa0414610 MtrunA17_Chr3g0101621 27.198 489 313 10 23 502 6 460 1.45e-51 183
Msa0414610 MtrunA17_Chr1g0197891 29.268 451 297 9 49 499 33 461 2.39e-51 182
Msa0414610 MtrunA17_Chr3g0101691 27.459 488 322 8 23 502 11 474 2.53e-51 183
Msa0414610 MtrunA17_Chr1g0160851 25.780 481 328 12 23 499 8 463 3.16e-51 182
Msa0414610 MtrunA17_Chr5g0430091 26.506 498 323 14 23 506 9 477 4.26e-51 182
Msa0414610 MtrunA17_Chr5g0430131 26.157 497 325 14 23 506 9 476 4.59e-51 182
Msa0414610 MtrunA17_Chr3g0101811 26.758 512 327 12 23 510 6 493 6.15e-51 182
Msa0414610 MtrunA17_Chr1g0197881 28.842 475 314 10 27 499 8 460 8.33e-51 181
Msa0414610 MtrunA17_Chr1g0197851 28.782 476 314 10 27 499 8 461 1.13e-50 181
Msa0414610 MtrunA17_Chr5g0445421 27.033 492 303 11 24 510 90 530 1.33e-50 182
Msa0414610 MtrunA17_Chr1g0205361 26.974 456 303 12 49 499 33 463 1.60e-50 181
Msa0414610 MtrunA17_Chr3g0101581 26.477 491 329 11 20 502 5 471 1.81e-50 181
Msa0414610 MtrunA17_Chr6g0463801 28.571 476 297 10 41 506 28 470 2.25e-50 180
Msa0414610 MtrunA17_Chr7g0265611 26.176 489 331 11 29 510 29 494 2.90e-50 180
Msa0414610 MtrunA17_Chr4g0020041 26.721 494 329 8 17 502 3 471 3.87e-50 180
Msa0414610 MtrunA17_Chr1g0205371 26.931 479 327 11 23 499 7 464 4.42e-50 179
Msa0414610 MtrunA17_Chr5g0403321 27.061 473 312 9 49 510 33 483 5.19e-50 179
Msa0414610 MtrunA17_Chr1g0213671 27.637 474 316 11 32 499 21 473 6.76e-50 179
Msa0414610 MtrunA17_Chr1g0198191 26.707 498 342 12 19 510 14 494 6.86e-50 179
Msa0414610 MtrunA17_Chr6g0451691 26.654 514 341 10 44 537 35 532 1.01e-49 179
Msa0414610 MtrunA17_Chr3g0101751 28.309 544 333 15 15 539 5 510 1.28e-49 178
Msa0414610 MtrunA17_Chr3g0101721 26.721 494 325 10 29 510 12 480 1.36e-49 178
Msa0414610 MtrunA17_Chr4g0039901 26.696 457 314 9 44 499 29 465 1.39e-49 178
Msa0414610 MtrunA17_Chr1g0162811 27.755 490 321 12 20 502 6 469 2.32e-49 177
Msa0414610 MtrunA17_Chr1g0162801 27.607 489 326 10 20 502 6 472 2.57e-49 177
Msa0414610 MtrunA17_Chr4g0024771 25.941 478 326 9 28 502 17 469 4.47e-49 177
Msa0414610 MtrunA17_Chr6g0458561 29.102 512 320 15 44 538 48 533 5.07e-49 177
Msa0414610 MtrunA17_Chr1g0197871 27.778 450 303 9 50 499 34 461 1.07e-48 175
Msa0414610 MtrunA17_Chr8g0377341 27.799 518 304 17 15 499 15 495 2.06e-48 176
Msa0414610 MtrunA17_Chr4g0011921 26.211 454 315 7 51 502 30 465 2.15e-48 175
Msa0414610 MtrunA17_Chr4g0039391 25.690 471 323 10 67 531 50 499 2.18e-48 175
Msa0414610 MtrunA17_Chr4g0052851 26.407 462 302 11 41 499 24 450 3.74e-48 174
Msa0414610 MtrunA17_Chr4g0058191 25.245 511 352 12 25 530 2 487 6.51e-48 173
Msa0414610 MtrunA17_Chr8g0339331 27.075 506 335 13 46 537 34 519 6.83e-48 174
Msa0414610 MtrunA17_Chr3g0101761 27.490 502 321 11 23 510 6 478 2.63e-47 172
Msa0414610 MtrunA17_Chr3g0101571 26.709 468 313 9 48 510 34 476 4.44e-47 171
Msa0414610 MtrunA17_Chr5g0431511 25.506 494 334 9 50 532 33 503 4.66e-47 171
Msa0414610 MtrunA17_Chr8g0372331 58.462 130 53 1 408 537 1 129 5.57e-47 160
Msa0414610 MtrunA17_Chr7g0218611 25.546 458 319 10 48 502 31 469 5.89e-47 171
Msa0414610 MtrunA17_Chr2g0280261 28.879 464 289 11 48 502 32 463 1.42e-46 170
Msa0414610 MtrunA17_Chr3g0101821 25.737 509 336 11 13 510 1 478 2.50e-46 169
Msa0414610 MtrunA17_Chr5g0432751 26.667 480 309 13 46 509 29 481 2.78e-46 169
Msa0414610 MtrunA17_Chr4g0074581 28.664 464 308 9 50 505 69 517 2.80e-46 170
Msa0414610 MtrunA17_Chr3g0101831 25.904 498 335 9 23 510 6 479 3.31e-46 169
Msa0414610 MtrunA17_Chr4g0011901 25.490 459 312 8 51 502 30 465 4.01e-46 169
Msa0414610 MtrunA17_Chr1g0156101 25.887 479 321 12 39 502 21 480 1.06e-45 167
Msa0414610 MtrunA17_Chr4g0076161 24.600 500 330 12 20 502 3 472 1.46e-45 167
Msa0414610 MtrunA17_Chr1g0164211 26.096 456 311 8 47 499 28 460 2.03e-45 166
Msa0414610 MtrunA17_Chr7g0218601 25.678 479 328 12 27 502 15 468 2.69e-45 166
Msa0414610 MtrunA17_Chr3g0101801 25.198 504 340 8 20 510 6 485 2.94e-45 166
Msa0414610 MtrunA17_Chr7g0246131 25.720 486 332 7 23 500 7 471 3.88e-45 166
Msa0414610 MtrunA17_Chr8g0371761 53.472 144 56 1 350 482 1 144 5.37e-45 155
Msa0414610 MtrunA17_Chr1g0167321 26.653 484 327 7 25 502 8 469 5.53e-45 166
Msa0414610 MtrunA17_Chr4g0011961 25.268 467 323 10 41 502 19 464 1.33e-44 164
Msa0414610 MtrunA17_Chr4g0046321 28.511 470 289 17 51 502 35 475 2.37e-44 164
Msa0414610 MtrunA17_Chr6g0463791 24.646 495 324 13 24 502 7 468 6.16e-44 162
Msa0414610 MtrunA17_Chr1g0200951 28.457 499 305 16 53 532 64 529 8.70e-44 162
Msa0414610 MtrunA17_Chr6g0451641 25.458 546 365 17 3 537 7 521 1.12e-43 162
Msa0414610 MtrunA17_Chr8g0351801 28.082 438 263 11 90 499 71 484 3.11e-43 161
Msa0414610 MtrunA17_Chr5g0419691 24.895 478 331 10 48 521 27 480 3.37e-43 160
Msa0414610 MtrunA17_Chr4g0046331 27.368 475 290 17 51 502 35 477 4.56e-43 160
Msa0414610 MtrunA17_Chr2g0296661 26.667 420 282 9 86 499 65 464 5.89e-43 160
Msa0414610 MtrunA17_Chr4g0046351 27.061 473 292 17 51 502 35 475 7.91e-43 160
Msa0414610 MtrunA17_Chr8g0357421 26.096 502 328 10 23 510 6 478 9.25e-43 159
Msa0414610 MtrunA17_Chr5g0406651 25.751 466 326 9 39 502 19 466 1.14e-42 159
Msa0414610 MtrunA17_Chr4g0011871 24.370 476 337 9 48 521 27 481 2.03e-42 158
Msa0414610 MtrunA17_Chr1g0156081 26.004 473 314 12 46 502 52 504 2.12e-42 159
Msa0414610 MtrunA17_Chr8g0346261 26.240 484 329 14 52 531 86 545 3.78e-42 158
Msa0414610 MtrunA17_Chr5g0419451 26.786 448 301 12 56 499 62 486 6.82e-42 157
Msa0414610 MtrunA17_Chr4g0011881 26.535 456 310 11 51 502 31 465 1.04e-41 156
Msa0414610 MtrunA17_Chr4g0011981 25.641 468 321 11 41 502 19 465 1.09e-41 156
Msa0414610 MtrunA17_Chr3g0101741 26.353 425 282 7 90 510 3 400 2.58e-41 154
Msa0414610 MtrunA17_Chr8g0357431 26.148 501 330 9 23 510 6 479 2.76e-41 155
Msa0414610 MtrunA17_Chr7g0246151 26.014 419 288 7 87 500 68 469 9.09e-41 154
Msa0414610 MtrunA17_Chr5g0430111 25.450 444 289 14 24 453 12 427 2.19e-40 151
Msa0414610 MtrunA17_Chr1g0210091 24.706 425 303 10 90 510 103 514 8.90e-40 152
Msa0414610 MtrunA17_Chr7g0246181 26.185 443 306 6 61 500 45 469 1.22e-38 148
Msa0414610 MtrunA17_Chr4g0017411 24.948 477 323 13 41 516 21 463 2.81e-38 147
Msa0414610 MtrunA17_Chr7g0258211 26.914 431 266 13 90 499 76 478 3.86e-38 147
Msa0414610 MtrunA17_Chr2g0310351 34.884 172 109 1 331 502 1 169 5.12e-37 135
Msa0414610 MtrunA17_Chr7g0246121 25.060 415 293 5 87 499 68 466 5.64e-37 143
Msa0414610 MtrunA17_Chr5g0430071 28.520 277 179 6 240 506 63 330 1.82e-35 136
Msa0414610 MtrunA17_Chr8g0364651 22.824 517 368 11 24 532 6 499 1.36e-34 136
Msa0414610 MtrunA17_Chr5g0431591 29.496 278 187 3 236 510 24 295 4.28e-34 131
Msa0414610 MtrunA17_Chr2g0280071 24.797 492 337 14 24 502 37 508 8.10e-34 136
Msa0414610 MtrunA17_Chr1g0160861 27.184 309 207 8 193 499 12 304 2.38e-33 129
Msa0414610 MtrunA17_Chr4g0046681 29.952 207 143 2 331 537 31 235 4.60e-33 126
Msa0414610 MtrunA17_Chr6g0451811 33.014 209 138 2 329 537 3 209 4.90e-33 125
Msa0414610 MtrunA17_Chr5g0409051 24.790 476 315 12 46 500 25 478 1.10e-32 131
Msa0414610 MtrunA17_Chr2g0280121 25.245 408 282 9 104 502 88 481 1.31e-32 130
Msa0414610 MtrunA17_Chr2g0314781 37.017 181 99 2 347 527 1 166 1.50e-32 122
Msa0414610 MtrunA17_Chr1g0174431 35.838 173 106 2 331 499 1 172 2.08e-32 123
Msa0414610 MtrunA17_Chr1g0156061 23.881 469 275 11 40 502 44 436 2.25e-32 129
Msa0414610 MtrunA17_Chr2g0280081 23.673 452 325 9 87 532 568 1005 1.27e-31 130
Msa0414610 MtrunA17_Chr2g0280081 25.352 426 291 10 87 502 67 475 2.28e-29 123
Msa0414610 MtrunA17_Chr6g0451681 30.705 241 156 5 302 537 247 481 3.06e-31 126
Msa0414610 MtrunA17_Chr6g0451681 26.190 252 154 10 4 241 23 256 9.96e-12 67.4
Msa0414610 MtrunA17_Chr8g0390871 33.511 188 120 4 324 510 20 203 3.74e-30 118
Msa0414610 MtrunA17_Chr5g0446101 32.340 235 146 6 272 502 57 282 8.47e-30 119
Msa0414610 MtrunA17_Chr4g0058211 28.111 217 153 1 314 530 2 215 1.72e-29 115
Msa0414610 MtrunA17_Chr8g0387101 24.439 446 310 13 97 532 79 507 1.19e-28 119
Msa0414610 MtrunA17_Chr5g0402981 32.474 194 128 3 345 537 6 197 2.91e-28 111
Msa0414610 MtrunA17_Chr4g0046661 27.570 214 153 2 324 537 18 229 5.50e-28 112
Msa0414610 MtrunA17_Chr5g0413911 22.105 475 332 12 47 499 39 497 1.59e-26 113
Msa0414610 MtrunA17_Chr6g0451771 31.280 211 135 3 331 537 22 226 1.85e-26 107
Msa0414610 MtrunA17_Chr2g0280011 28.846 208 141 3 330 532 7 212 4.74e-26 105
Msa0414610 MtrunA17_Chr3g0101591 34.054 185 112 3 333 510 34 215 2.41e-25 104
Msa0414610 MtrunA17_Chr6g0477081 32.990 194 115 3 249 442 64 242 3.57e-25 104
Msa0414610 MtrunA17_Chr2g0280061 30.899 178 117 2 330 502 7 183 8.33e-25 102
Msa0414610 MtrunA17_Chr4g0046701 32.727 165 109 2 373 537 1 163 1.19e-24 100
Msa0414610 MtrunA17_Chr2g0280041 22.511 462 318 12 87 532 99 536 6.06e-24 105
Msa0414610 MtrunA17_Chr4g0011851 26.214 206 143 3 318 521 1 199 1.60e-23 99.0
Msa0414610 MtrunA17_Chr3g0086681 38.583 127 77 1 374 499 8 134 3.42e-23 96.7
Msa0414610 MtrunA17_Chr5g0445761 32.558 172 113 1 331 502 1 169 4.04e-23 97.4
Msa0414610 MtrunA17_Chr6g0463621 28.902 173 121 2 331 502 1 172 8.84e-23 96.3
Msa0414610 MtrunA17_Chr5g0430151 30.667 150 100 2 362 510 6 152 1.33e-22 95.1
Msa0414610 MtrunA17_Chr4g0011941 27.907 172 121 1 331 502 1 169 1.71e-22 95.5
Msa0414610 MtrunA17_Chr5g0429651 23.820 466 288 18 48 478 25 458 1.89e-22 100
Msa0414610 MtrunA17_Chr5g0444981 34.969 163 102 2 337 499 17 175 5.85e-22 94.4
Msa0414610 MtrunA17_Chr7g0255131 23.467 473 320 16 22 478 11 457 6.70e-22 99.0
Msa0414610 MtrunA17_Chr5g0402971 24.627 268 190 6 51 314 41 300 7.30e-22 96.7
Msa0414610 MtrunA17_Chr5g0423621 32.680 153 98 2 347 499 1 148 7.95e-22 93.2
Msa0414610 MtrunA17_Chr5g0445371 27.706 231 131 4 282 510 11 207 1.04e-21 94.4
Msa0414610 MtrunA17_Chr5g0445751 26.687 326 205 9 11 329 7 305 1.23e-21 95.9
Msa0414610 MtrunA17_Chr5g0445351 33.803 142 91 1 359 500 52 190 4.24e-21 92.0
Msa0414610 MtrunA17_Chr5g0430041 30.464 151 101 3 357 506 1 148 5.22e-20 87.8
Msa0414610 MtrunA17_Chr4g0046691 24.436 266 175 6 51 312 40 283 1.72e-19 89.4
Msa0414610 MtrunA17_Chr1g0164321 26.562 256 165 6 239 478 249 497 4.57e-19 90.5
Msa0414610 MtrunA17_Chr4g0038271 23.947 451 289 18 57 478 85 510 4.63e-19 90.5
Msa0414610 MtrunA17_Chr8g0348751 23.128 454 299 17 53 478 29 460 7.96e-18 86.7
Msa0414610 MtrunA17_Chr8g0364631 22.363 474 335 8 50 510 32 485 8.85e-18 86.3
Msa0414610 MtrunA17_Chr3g0116731 35.897 117 68 1 382 498 1 110 9.53e-18 80.1
Msa0414610 MtrunA17_Chr8g0387001 23.810 483 301 19 30 478 6 455 1.22e-17 85.9
Msa0414610 MtrunA17_Chr0c19g0493771 23.389 419 268 17 100 499 234 618 1.99e-17 85.9
Msa0414610 MtrunA17_Chr4g0011861 23.132 281 200 7 48 326 27 293 2.79e-16 79.7
Msa0414610 MtrunA17_Chr5g0445361 35.514 107 66 1 404 510 11 114 3.39e-16 75.5
Msa0414610 MtrunA17_Chr4g0028321 34.783 138 77 5 382 510 1 134 5.45e-16 75.9
Msa0414610 MtrunA17_Chr3g0117301 31.356 118 78 1 382 499 1 115 6.22e-16 74.3
Msa0414610 MtrunA17_Chr6g0463611 23.734 316 199 12 23 326 21 306 7.15e-16 79.0
Msa0414610 MtrunA17_Chr1g0174421 23.934 305 216 9 23 326 22 311 1.13e-15 78.6
Msa0414610 MtrunA17_Chr4g0030741 24.739 287 187 9 76 354 84 349 3.71e-15 77.0
Msa0414610 MtrunA17_Chr3g0101541 33.051 118 76 1 382 499 4 118 4.09e-15 72.4
Msa0414610 MtrunA17_Chr5g0445411 28.409 176 117 3 6 177 1 171 1.40e-14 72.0
Msa0414610 MtrunA17_Chr4g0046671 21.771 271 193 5 51 315 45 302 1.42e-14 75.1
Msa0414610 MtrunA17_Chr4g0011931 22.876 306 215 8 25 326 4 292 2.98e-14 73.6
Msa0414610 MtrunA17_Chr6g0449341 24.354 271 183 8 263 513 286 554 4.20e-14 75.1
Msa0414610 MtrunA17_Chr4g0076171 27.044 159 92 2 347 502 1 138 5.85e-14 70.1
Msa0414610 MtrunA17_Chr6g0449331 23.985 271 184 6 263 513 238 506 7.41e-14 73.9
Msa0414610 MtrunA17_Chr7g0248991 24.275 276 174 10 187 448 96 350 1.07e-13 72.8
Msa0414610 MtrunA17_Chr1g0176851 26.482 253 159 8 140 385 2 234 1.28e-13 70.5
Msa0414610 MtrunA17_Chr1g0183611 25.620 242 171 5 263 497 155 394 1.58e-13 72.8
Msa0414610 MtrunA17_Chr8g0351311 21.714 350 243 9 142 478 130 461 1.79e-13 72.8
Msa0414610 MtrunA17_Chr7g0225531 23.207 237 172 4 263 497 252 480 4.43e-13 71.6
Msa0414610 MtrunA17_Chr5g0431631 27.972 143 102 1 19 161 19 160 7.87e-13 66.6
Msa0414610 MtrunA17_Chr2g0313771 22.872 376 248 15 142 504 153 499 1.00e-12 70.5
Msa0414610 MtrunA17_Chr2g0334021 19.675 493 360 13 49 531 32 498 1.38e-12 70.1
Msa0414610 MtrunA17_Chr1g0184421 20.084 478 348 17 26 496 16 466 1.46e-12 70.1
Msa0414610 MtrunA17_Chr1g0184461 21.694 484 341 16 23 496 11 466 1.50e-12 70.1
Msa0414610 MtrunA17_Chr1g0163451 23.457 243 174 6 263 497 255 493 2.23e-12 69.3
Msa0414610 MtrunA17_Chr1g0163421 22.951 244 174 7 263 497 271 509 4.20e-12 68.6
Msa0414610 MtrunA17_Chr4g0004481 24.898 245 161 7 263 495 231 464 5.32e-12 68.2
Msa0414610 MtrunA17_Chr8g0381571 22.845 232 165 5 267 494 235 456 6.50e-12 67.8
Msa0414610 MtrunA17_Chr2g0321171 27.064 218 141 7 263 478 246 447 6.69e-12 67.8
Msa0414610 MtrunA17_Chr5g0430171 25.207 242 151 9 23 257 9 227 6.69e-12 65.5
Msa0414610 MtrunA17_Chr6g0451801 21.656 314 219 8 15 315 8 307 6.77e-12 67.0
Msa0414610 MtrunA17_Chr8g0381541 22.553 235 168 5 267 497 235 459 8.66e-12 67.4
Msa0414610 MtrunA17_Chr8g0351391 20.741 270 188 6 220 478 206 460 1.12e-11 67.4
Msa0414610 MtrunA17_Chr7g0260821 25.105 239 157 8 263 496 244 465 1.23e-11 67.0
Msa0414610 MtrunA17_Chr5g0396521 21.603 287 175 9 264 511 277 552 1.44e-11 67.0
Msa0414610 MtrunA17_Chr3g0119681 22.134 253 171 6 263 498 244 487 2.65e-11 66.2
Msa0414610 MtrunA17_Chr4g0056981 40.845 71 42 0 357 427 1 71 3.00e-11 59.3
Msa0414610 MtrunA17_Chr6g0449351 23.767 223 157 6 263 478 197 413 3.40e-11 65.5
Msa0414610 MtrunA17_Chr7g0227281 26.776 183 124 5 302 478 266 444 5.71e-11 65.1
Msa0414610 MtrunA17_Chr3g0107501 24.528 265 178 9 243 500 201 450 9.37e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414610 AT4G39950.1 51.803 527 241 7 17 537 18 537 0.0 569
Msa0414610 AT4G39950.2 51.803 527 241 7 17 537 58 577 0.0 568
Msa0414610 AT2G22330.2 51.515 528 240 7 18 537 43 562 0.0 565
Msa0414610 AT2G22330.1 51.504 532 244 7 7 537 21 539 0.0 565
Msa0414610 AT5G05260.2 52.236 492 227 6 50 537 40 527 0.0 539
Msa0414610 AT5G05260.1 50.000 492 206 6 50 537 40 495 3.57e-173 499
Msa0414610 AT1G58260.1 45.577 520 273 5 24 537 10 525 6.99e-166 481
Msa0414610 AT1G79370.1 45.161 527 272 5 24 537 16 538 1.45e-158 463
Msa0414610 AT5G35917.1 46.761 494 210 9 50 537 42 488 1.82e-155 453
Msa0414610 AT1G16410.1 39.279 527 303 8 22 537 13 533 1.22e-134 402
Msa0414610 AT1G16400.1 38.060 536 314 8 15 537 2 532 1.56e-129 389
Msa0414610 AT1G16410.2 37.101 407 242 6 22 419 13 414 4.95e-94 293
Msa0414610 AT1G01280.1 35.099 453 277 8 90 537 69 509 7.49e-87 278
Msa0414610 AT5G07990.1 32.068 527 324 11 23 537 4 508 2.86e-74 244
Msa0414610 AT4G12300.1 29.767 514 328 12 33 537 26 515 5.90e-66 223
Msa0414610 AT4G12320.1 29.942 521 335 11 23 537 21 517 1.46e-64 219
Msa0414610 AT2G40890.1 29.264 516 327 13 30 537 16 501 1.64e-63 216
Msa0414610 AT4G22710.1 29.545 484 306 9 59 533 62 519 4.70e-63 215
Msa0414610 AT4G22690.1 29.522 481 310 8 59 533 93 550 5.52e-63 216
Msa0414610 AT4G37430.1 27.079 517 335 15 23 531 10 492 5.91e-60 206
Msa0414610 AT2G23190.1 28.131 519 327 16 24 531 49 532 2.01e-59 206
Msa0414610 AT4G31940.1 29.630 459 305 10 52 498 33 485 6.48e-59 204
Msa0414610 AT5G06900.1 30.310 452 289 12 50 498 34 462 3.07e-58 202
Msa0414610 AT5G44620.1 28.539 445 301 6 59 502 55 483 4.88e-57 199
Msa0414610 AT4G31970.1 28.112 498 338 10 52 537 33 522 7.06e-57 199
Msa0414610 AT4G37320.1 28.820 517 325 15 24 531 6 488 1.02e-56 197
Msa0414610 AT4G37340.1 27.168 519 334 15 20 531 8 489 1.12e-55 195
Msa0414610 AT2G25160.1 29.924 528 342 13 23 537 6 518 1.48e-55 195
Msa0414610 AT3G20140.1 29.569 487 293 15 41 509 29 483 1.13e-54 192
Msa0414610 AT5G36220.1 27.462 528 330 15 15 531 9 494 2.57e-54 191
Msa0414610 AT3G28740.1 30.087 462 286 14 45 499 34 465 3.25e-54 191
Msa0414610 AT5G57220.1 26.411 496 319 12 6 499 1 452 3.58e-54 191
Msa0414610 AT4G37370.1 28.033 478 313 13 26 499 6 456 3.77e-54 191
Msa0414610 AT2G14100.1 30.070 429 277 11 77 499 65 476 3.80e-54 191
Msa0414610 AT4G12310.1 27.459 488 325 9 59 538 53 519 6.73e-54 191
Msa0414610 AT3G20090.2 28.911 505 309 13 15 499 4 478 7.03e-53 188
Msa0414610 AT4G37410.1 25.988 481 325 13 24 499 4 458 1.23e-52 187
Msa0414610 AT4G37360.1 27.443 481 318 13 23 499 4 457 2.32e-52 186
Msa0414610 AT2G23220.1 27.647 510 318 18 36 531 32 504 2.72e-52 186
Msa0414610 AT5G67310.1 26.240 484 317 12 23 499 18 468 5.27e-52 185
Msa0414610 AT4G15360.1 28.974 497 307 16 18 499 9 474 8.86e-52 185
Msa0414610 AT3G61880.1 29.880 502 314 17 40 531 56 529 8.91e-52 185
Msa0414610 AT5G04330.1 27.723 505 310 14 51 532 33 505 1.05e-51 184
Msa0414610 AT3G48280.1 27.553 519 332 13 23 533 8 490 1.60e-51 183
Msa0414610 AT2G45560.1 25.714 490 339 12 18 502 7 476 1.84e-51 184
Msa0414610 AT2G45550.1 26.477 491 334 12 18 502 7 476 2.15e-51 184
Msa0414610 AT3G61880.2 29.880 502 314 17 40 531 56 529 2.25e-51 184
Msa0414610 AT3G48310.1 27.430 463 298 11 46 502 28 458 3.17e-51 182
Msa0414610 AT4G37330.1 28.776 490 292 18 26 499 6 454 5.61e-51 182
Msa0414610 AT4G31950.1 27.652 528 341 13 27 537 8 511 7.35e-51 182
Msa0414610 AT3G32047.1 27.674 430 285 9 77 499 64 474 7.77e-51 182
Msa0414610 AT2G45570.1 26.698 427 297 6 87 510 72 485 1.10e-50 182
Msa0414610 AT3G26830.1 27.651 481 322 11 27 500 3 464 1.14e-50 181
Msa0414610 AT4G37310.1 24.713 522 365 14 24 536 4 506 1.80e-50 181
Msa0414610 AT4G36220.1 26.042 480 295 9 57 510 47 492 2.15e-50 181
Msa0414610 AT4G31500.1 26.304 460 319 8 46 502 25 467 5.30e-50 179
Msa0414610 AT4G15330.1 26.901 513 336 13 25 530 14 494 7.69e-50 179
Msa0414610 AT5G10610.1 25.984 508 347 11 27 530 7 489 7.87e-50 179
Msa0414610 AT1G74540.1 27.218 496 321 14 24 510 1 465 9.30e-50 179
Msa0414610 AT3G10560.1 25.989 531 368 11 6 532 4 513 1.12e-49 179
Msa0414610 AT1G33720.1 25.478 471 321 11 48 510 36 484 1.21e-49 179
Msa0414610 AT2G27000.1 28.935 432 285 10 75 499 59 475 1.25e-49 179
Msa0414610 AT3G25180.1 27.256 532 350 12 16 537 8 512 1.26e-49 179
Msa0414610 AT4G12330.1 28.016 489 307 13 59 533 55 512 1.73e-49 179
Msa0414610 AT1G13090.2 27.651 481 306 11 45 511 23 475 9.07e-49 176
Msa0414610 AT3G44250.1 28.601 479 299 12 45 509 23 472 1.50e-48 176
Msa0414610 AT3G61040.1 28.200 461 299 12 45 499 28 462 1.68e-48 176
Msa0414610 AT3G52970.1 26.547 501 332 15 15 500 1 480 2.37e-48 175
Msa0414610 AT5G04630.1 25.355 493 350 6 20 510 11 487 1.23e-47 173
Msa0414610 AT3G48300.1 27.193 456 294 12 52 501 31 454 1.38e-47 172
Msa0414610 AT3G48300.2 27.193 456 294 12 52 501 33 456 1.43e-47 172
Msa0414610 AT5G35715.1 27.842 431 278 10 90 509 3 411 1.48e-47 171
Msa0414610 AT4G37400.1 25.581 473 315 11 67 531 46 489 1.54e-47 173
Msa0414610 AT4G13770.1 26.283 487 318 12 25 502 14 468 2.05e-47 172
Msa0414610 AT3G52970.2 26.275 510 336 15 15 500 1 494 2.12e-47 173
Msa0414610 AT3G20130.1 28.605 430 284 9 77 499 64 477 2.38e-47 172
Msa0414610 AT1G13080.1 26.653 484 332 10 25 502 4 470 3.84e-47 172
Msa0414610 AT1G13110.1 26.572 493 321 10 24 502 7 472 4.27e-47 172
Msa0414610 AT3G20940.1 26.891 476 305 14 41 499 29 478 5.42e-47 172
Msa0414610 AT1G01190.1 26.937 542 326 20 7 514 12 517 5.97e-47 172
Msa0414610 AT3G48270.1 27.983 461 292 14 46 499 27 454 7.11e-47 171
Msa0414610 AT1G01190.2 26.937 542 326 20 7 514 17 522 7.76e-47 172
Msa0414610 AT5G25120.1 26.915 483 315 14 27 502 11 462 8.93e-47 171
Msa0414610 AT3G20950.1 26.575 508 320 14 15 499 4 481 9.05e-47 171
Msa0414610 AT5G04660.1 26.786 448 313 5 87 532 78 512 1.15e-46 171
Msa0414610 AT3G53300.1 27.349 479 301 13 45 506 23 471 1.88e-46 170
Msa0414610 AT2G24180.1 26.653 484 313 12 50 520 36 490 5.02e-46 169
Msa0414610 AT3G20120.4 28.670 436 278 12 77 500 63 477 5.11e-46 169
Msa0414610 AT5G10600.1 25.150 501 335 13 38 530 37 505 7.43e-46 169
Msa0414610 AT1G74110.1 27.410 529 352 18 3 514 9 522 7.58e-46 169
Msa0414610 AT1G11610.1 27.347 490 320 16 46 526 29 491 8.53e-46 168
Msa0414610 AT1G11610.2 26.667 465 307 13 46 503 29 466 1.12e-45 168
Msa0414610 AT1G50520.1 27.856 499 323 16 16 499 4 480 1.32e-45 168
Msa0414610 AT3G20080.2 27.122 483 295 13 41 499 29 478 1.52e-45 168
Msa0414610 AT3G20080.1 27.122 483 295 13 41 499 29 478 1.52e-45 168
Msa0414610 AT1G74550.1 25.385 520 346 12 24 537 3 486 1.88e-45 167
Msa0414610 AT3G53280.1 27.122 483 315 10 45 516 23 479 2.35e-45 167
Msa0414610 AT4G15350.1 27.523 436 282 10 77 499 57 471 2.59e-45 167
Msa0414610 AT5G57260.1 25.478 471 316 10 48 507 28 474 2.65e-45 167
Msa0414610 AT1G66540.1 27.543 403 251 10 139 531 4 375 3.06e-45 164
Msa0414610 AT3G26170.1 25.665 526 344 16 16 529 1 491 4.29e-45 166
Msa0414610 AT5G25140.1 25.358 489 324 12 24 502 5 462 9.38e-45 165
Msa0414610 AT3G20100.1 27.376 442 283 12 73 499 59 477 1.05e-44 165
Msa0414610 AT5G06905.1 26.523 509 320 18 27 510 9 488 1.16e-44 165
Msa0414610 AT3G26280.1 24.498 498 330 14 27 510 15 480 1.29e-44 165
Msa0414610 AT1G13100.1 26.742 445 287 11 87 516 59 479 1.44e-44 164
Msa0414610 AT3G26280.2 24.498 498 330 14 27 510 32 497 1.91e-44 165
Msa0414610 AT3G48290.1 25.745 470 305 11 46 506 29 463 2.17e-44 164
Msa0414610 AT2G45580.1 26.379 417 289 7 87 499 72 474 4.59e-44 164
Msa0414610 AT5G25180.1 25.773 485 316 13 28 502 12 462 5.49e-44 163
Msa0414610 AT3G20090.1 30.959 365 214 10 148 499 1 340 9.68e-44 160
Msa0414610 AT2G46660.1 27.447 470 308 15 46 510 66 507 1.04e-43 163
Msa0414610 AT3G26150.1 26.096 502 324 16 16 502 1 470 1.25e-43 162
Msa0414610 AT5G47990.1 28.266 421 268 11 90 499 80 477 1.87e-43 162
Msa0414610 AT1G28430.1 26.573 429 296 8 76 499 61 475 2.23e-43 162
Msa0414610 AT5G35920.1 50.676 148 71 2 390 537 8 153 2.99e-43 151
Msa0414610 AT5G42590.1 27.043 514 336 17 23 525 6 491 3.78e-43 160
Msa0414610 AT3G26210.1 26.328 433 281 10 90 509 68 475 8.96e-43 160
Msa0414610 AT3G26190.1 24.946 465 322 10 45 502 23 467 9.49e-43 159
Msa0414610 AT3G26160.1 24.432 528 354 14 16 532 1 494 9.57e-43 160
Msa0414610 AT3G20110.1 25.651 499 320 14 17 500 6 468 9.83e-43 160
Msa0414610 AT4G13310.1 25.272 459 315 11 46 499 28 463 1.06e-42 159
Msa0414610 AT4G15330.2 25.825 515 320 14 21 530 9 466 1.07e-42 159
Msa0414610 AT4G13290.1 25.714 455 302 12 50 499 33 456 1.12e-42 159
Msa0414610 AT3G20960.2 28.369 423 265 11 90 499 79 476 1.38e-42 159
Msa0414610 AT5G42580.1 26.316 418 268 9 90 499 77 462 1.55e-42 159
Msa0414610 AT3G26320.1 25.325 462 308 10 51 502 32 466 1.57e-42 159
Msa0414610 AT3G26270.1 26.237 465 312 12 47 502 29 471 2.24e-42 159
Msa0414610 AT3G26330.1 25.108 462 309 11 51 502 32 466 3.39e-42 158
Msa0414610 AT2G42250.1 25.341 513 343 14 29 526 18 505 5.67e-42 158
Msa0414610 AT3G26300.1 25.102 490 328 14 23 502 6 466 5.92e-42 157
Msa0414610 AT3G48320.1 25.667 487 319 13 25 505 12 461 7.22e-42 157
Msa0414610 AT1G50560.1 29.343 426 260 15 90 499 81 481 7.24e-42 157
Msa0414610 AT1G33720.4 26.158 367 251 7 148 510 2 352 7.86e-42 154
Msa0414610 AT1G33720.3 26.158 367 251 7 148 510 2 352 7.86e-42 154
Msa0414610 AT1G33720.5 26.158 367 251 7 148 510 2 352 7.86e-42 154
Msa0414610 AT3G26180.1 25.203 492 332 13 47 529 27 491 8.23e-42 157
Msa0414610 AT2G30770.1 25.562 489 328 12 47 526 30 491 1.01e-41 157
Msa0414610 AT3G26310.1 24.847 491 331 11 22 502 3 465 2.03e-41 156
Msa0414610 AT4G15380.1 25.359 418 286 6 87 499 77 473 2.65e-41 156
Msa0414610 AT2G30750.1 26.380 489 324 13 47 526 30 491 1.16e-40 154
Msa0414610 AT3G26230.1 24.248 499 340 13 23 510 5 476 3.29e-40 152
Msa0414610 AT2G45580.2 32.157 255 163 5 249 499 72 320 3.85e-40 149
Msa0414610 AT3G10570.1 24.832 447 322 4 87 532 80 513 3.95e-40 152
Msa0414610 AT3G48290.2 24.200 500 307 13 46 509 29 492 1.37e-39 151
Msa0414610 AT1G33730.1 26.331 357 249 6 155 510 5 348 2.20e-39 147
Msa0414610 AT1G33730.2 26.331 357 249 6 155 510 5 348 2.20e-39 147
Msa0414610 AT3G26200.1 25.107 466 322 10 44 502 22 467 2.81e-39 150
Msa0414610 AT1G66540.2 29.129 333 195 10 209 531 15 316 5.22e-39 145
Msa0414610 AT3G20120.2 29.834 362 224 11 148 500 1 341 8.02e-39 146
Msa0414610 AT3G20120.3 29.834 362 224 11 148 500 1 341 8.02e-39 146
Msa0414610 AT3G20120.1 29.834 362 224 11 148 500 1 341 8.02e-39 146
Msa0414610 AT1G11600.1 24.848 495 344 9 23 505 6 484 9.84e-39 149
Msa0414610 AT5G25130.1 25.104 482 325 12 27 502 11 462 1.27e-38 148
Msa0414610 AT3G26290.1 25.478 471 312 11 43 502 24 466 3.66e-38 147
Msa0414610 AT3G20130.2 26.846 447 277 10 57 499 49 449 3.81e-38 146
Msa0414610 AT3G26290.2 25.478 471 312 11 43 502 37 479 5.07e-38 147
Msa0414610 AT3G20960.1 29.178 377 237 11 133 499 17 373 7.57e-38 144
Msa0414610 AT1G13710.1 27.294 436 286 13 103 531 101 512 1.76e-37 145
Msa0414610 AT5G36220.2 29.217 332 202 10 205 531 45 348 3.05e-37 141
Msa0414610 AT2G02580.1 24.897 486 333 12 26 502 4 466 1.91e-36 142
Msa0414610 AT1G33720.2 24.235 392 252 8 148 510 2 377 2.04e-36 140
Msa0414610 AT3G26220.1 25.309 486 331 14 25 499 4 468 2.07e-35 139
Msa0414610 AT2G30490.1 24.318 440 291 12 86 509 67 480 7.75e-35 137
Msa0414610 AT2G05180.1 26.904 394 240 12 77 451 63 427 1.60e-34 135
Msa0414610 AT2G25160.2 29.793 386 247 9 23 397 6 378 2.69e-34 134
Msa0414610 AT5G24950.1 22.609 460 323 11 47 499 29 462 4.57e-34 135
Msa0414610 AT5G09970.1 27.234 470 286 21 52 500 71 505 4.74e-34 135
Msa0414610 AT2G27010.1 30.112 269 167 6 269 530 222 476 5.36e-34 135
Msa0414610 AT1G64940.1 24.506 506 328 15 50 531 33 508 6.68e-34 135
Msa0414610 AT5G24960.1 25.435 460 310 12 47 499 30 463 1.24e-33 134
Msa0414610 AT3G20080.4 28.075 374 214 12 148 499 1 341 1.55e-33 132
Msa0414610 AT3G20080.5 28.075 374 214 12 148 499 1 341 1.55e-33 132
Msa0414610 AT3G20080.6 28.075 374 214 12 148 499 1 341 1.55e-33 132
Msa0414610 AT3G20080.3 28.075 374 214 12 148 499 1 341 1.55e-33 132
Msa0414610 AT3G20935.1 35.465 172 108 2 330 499 133 303 1.76e-31 125
Msa0414610 AT1G64950.1 25.100 502 330 17 50 531 32 507 9.26e-31 125
Msa0414610 AT3G61040.2 26.684 386 254 11 45 424 28 390 4.90e-30 122
Msa0414610 AT4G20240.1 23.923 418 290 12 47 459 30 424 8.42e-30 122
Msa0414610 AT2G12190.1 23.830 470 315 13 50 499 32 478 2.42e-29 122
Msa0414610 AT1G13080.2 24.286 350 247 6 157 502 17 352 8.09e-29 118
Msa0414610 AT3G25180.2 26.598 391 256 10 16 397 8 376 9.06e-29 118
Msa0414610 AT3G03470.1 23.589 496 335 14 23 499 7 477 8.03e-28 117
Msa0414610 AT1G64930.1 21.670 503 347 14 50 531 32 508 2.82e-27 115
Msa0414610 AT4G13310.2 24.021 383 267 9 46 424 28 390 3.51e-27 114
Msa0414610 AT1G58265.1 44.068 118 53 3 421 534 12 120 3.10e-26 105
Msa0414610 AT3G56630.1 23.667 469 330 13 53 511 30 480 3.45e-25 109
Msa0414610 AT2G45580.3 23.684 342 246 6 87 424 72 402 9.24e-25 107
Msa0414610 AT3G26180.2 30.000 210 140 4 297 502 130 336 2.76e-24 105
Msa0414610 AT1G34540.1 22.993 461 331 12 26 478 3 447 5.90e-23 102
Msa0414610 AT3G53290.1 26.781 407 256 14 106 508 11 379 6.77e-23 101
Msa0414610 AT5G61320.1 24.113 423 277 12 87 499 68 456 2.86e-22 100
Msa0414610 AT4G20240.2 22.775 382 268 11 47 424 30 388 6.44e-22 98.6
Msa0414610 AT5G25900.1 20.825 485 347 13 57 531 50 507 2.17e-21 97.8
Msa0414610 AT1G64900.1 23.297 455 320 13 87 531 68 503 2.36e-20 94.7
Msa0414610 AT4G39490.1 22.756 479 321 17 26 478 11 466 3.54e-19 91.3
Msa0414610 AT5G23190.1 27.559 254 160 10 239 478 247 490 2.19e-18 89.0
Msa0414610 AT5G24960.2 23.636 385 265 10 47 425 30 391 2.49e-18 87.8
Msa0414610 AT5G58860.1 22.944 462 285 16 53 478 32 458 2.89e-18 88.2
Msa0414610 AT1G57750.1 26.667 240 165 4 263 499 236 467 3.43e-18 88.2
Msa0414610 AT1G31800.1 22.350 434 276 17 100 510 155 550 3.07e-17 85.5
Msa0414610 AT2G45970.1 22.083 480 318 18 30 478 6 460 4.42e-17 84.7
Msa0414610 AT4G00360.1 21.622 481 320 18 30 478 6 461 8.81e-17 84.0
Msa0414610 AT4G32170.1 21.610 472 325 14 49 498 25 473 1.46e-16 83.2
Msa0414610 AT1G13090.1 27.758 281 169 8 45 316 23 278 2.66e-16 80.1
Msa0414610 AT4G39500.2 25.410 244 171 5 263 498 246 486 4.16e-16 81.6
Msa0414610 AT4G39500.1 24.809 262 179 6 245 498 185 436 6.58e-16 80.9
Msa0414610 AT1G13140.1 21.705 516 319 21 6 478 1 474 9.79e-16 80.5
Msa0414610 AT5G63450.1 26.971 241 159 7 263 497 242 471 1.25e-14 77.0
Msa0414610 AT5G63450.2 26.971 241 159 7 263 497 300 529 1.41e-14 77.0
Msa0414610 AT1G01600.1 21.503 479 325 18 30 478 6 463 2.76e-14 75.9
Msa0414610 AT2G44890.1 25.564 266 172 9 263 512 236 491 7.74e-14 74.3
Msa0414610 AT1G73340.1 21.095 493 333 17 15 500 11 454 9.62e-14 73.9
Msa0414610 AT3G48520.1 25.726 241 163 7 263 498 240 469 9.96e-14 73.9
Msa0414610 AT3G53305.1 36.090 133 76 3 377 509 183 306 1.60e-13 72.4
Msa0414610 AT3G53130.1 24.017 229 159 5 282 506 300 517 2.63e-13 72.8
Msa0414610 AT2G32440.2 22.645 499 310 17 46 531 40 475 3.30e-13 72.4
Msa0414610 AT2G32440.1 22.645 499 310 17 46 531 40 475 3.30e-13 72.4
Msa0414610 AT2G45560.2 21.405 299 215 9 18 311 7 290 4.72e-13 70.9
Msa0414610 AT1G57750.2 21.460 452 296 15 27 454 8 424 1.08e-12 70.5
Msa0414610 AT2G23180.1 22.984 248 177 5 263 498 237 482 3.89e-11 65.9

Find 142 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGTTGTTGGCATCTTTA+AGG 0.170719 3_2:+60186654 None:intergenic
GGTTTATTTGCAAGCATTTC+AGG 0.188028 3_2:+60187391 None:intergenic
AGAGCTTCATTCCAAACTTT+TGG 0.234905 3_2:+60186088 None:intergenic
CTCAACAAAGTGGTATCTTA+TGG 0.251490 3_2:+60187474 None:intergenic
AAATATTTGAAAATTTAATA+AGG 0.264846 3_2:-60185771 Msa0414610:three_prime_UTR
GCATCAGCTGTTACACCCTT+TGG 0.271072 3_2:-60187178 Msa0414610:CDS
GATTATATGCCATTCTTTAG+AGG 0.276386 3_2:-60186830 Msa0414610:CDS
TCAATTCTCTTCTCAATGAT+TGG 0.286477 3_2:+60186740 None:intergenic
TTGCAATTTGATGAGGAAAT+TGG 0.287149 3_2:-60186972 Msa0414610:CDS
TATCATCAGCAAAGGTTTCT+TGG 0.295206 3_2:-60187200 Msa0414610:CDS
ATAACTACATGACTACCTTT+TGG 0.296291 3_2:+60186136 None:intergenic
CATCAGCTGTTACACCCTTT+GGG 0.297203 3_2:-60187177 Msa0414610:CDS
TGATGGGTCTATGGTAGTTT+TGG 0.308095 3_2:-60186035 Msa0414610:CDS
GGTTTGGAATATCCGATTCT+TGG 0.309769 3_2:+60186269 None:intergenic
TGTGGTTCCAAGCACAATTC+CGG 0.310189 3_2:+60185961 None:intergenic
TTATGTATCCACCTAGTTGC+AGG 0.321764 3_2:+60187370 None:intergenic
ATTTCCTCTAACGTCAATAA+TGG 0.330983 3_2:+60186632 None:intergenic
CAAACCATTATTGACGTTAG+AGG 0.334253 3_2:-60186636 Msa0414610:CDS
TGTTGTAGACATAAAACATT+AGG 0.355360 3_2:+60187056 None:intergenic
TAATCTTATATAACGGTGTT+TGG 0.355918 3_2:-60185740 Msa0414610:three_prime_UTR
AGTTCAATGGTTGATGCATT+AGG 0.356955 3_2:+60185884 None:intergenic
GTGCTCCATTGTTTAGTAAT+GGG 0.360583 3_2:-60185650 Msa0414610:three_prime_UTR
CAAGCTATGAGCTACACTTC+TGG 0.360708 3_2:-60187571 Msa0414610:CDS
ATTGACGTTAGAGGAAATAA+AGG 0.361179 3_2:-60186627 Msa0414610:CDS
TATAATTCTGATGCCAATCT+TGG 0.362454 3_2:+60185803 None:intergenic
ATAACGGTGTTTGGTTAGTA+AGG 0.362672 3_2:-60185731 Msa0414610:three_prime_UTR
TTTGTTGTTGGCATCTTTAA+GGG 0.368353 3_2:+60186655 None:intergenic
TCAACGAGCCACTGAAGAAT+TGG 0.369263 3_2:-60186320 Msa0414610:CDS
TTTGGGACCGGGTGGTAGTT+TGG 0.372123 3_2:+60187438 None:intergenic
GCTTTCACATAGTTGAGGTT+TGG 0.373818 3_2:+60186253 None:intergenic
TTTAGAGGACTTGACTTTGA+TGG 0.381667 3_2:-60186815 Msa0414610:CDS
CGTCAATAATGGTTTGTTGT+TGG 0.390165 3_2:+60186643 None:intergenic
GTGGTTCCAAGCACAATTCC+GGG 0.391398 3_2:+60185962 None:intergenic
TCGGACGAAATCCAAAAGTT+TGG 0.392283 3_2:-60186099 Msa0414610:CDS
GCAATGGTGGGACAGGTAAC+AGG 0.392862 3_2:+60187286 None:intergenic
GAATGATGGTGGTCCTGGTT+TGG 0.404766 3_2:-60186918 Msa0414610:CDS
CATTCTTTCTCAAGAATTCA+AGG 0.405169 3_2:+60187263 None:intergenic
ACAATGACTGTGATGTTATT+AGG 0.406786 3_2:-60185941 Msa0414610:CDS
AATGATATGAACTTCAAATC+TGG 0.414952 3_2:+60186007 None:intergenic
ACCAACTATAGGCCATGGTT+TGG 0.419820 3_2:+60187420 None:intergenic
ATATCAGTGGACATGGATAT+TGG 0.427913 3_2:+60187220 None:intergenic
GTGGCTCGTTGAAGTAAATC+TGG 0.435855 3_2:+60186331 None:intergenic
TCAGGAATATTACCAACTAT+AGG 0.437997 3_2:+60187409 None:intergenic
GGAATACTTGAGAAGTTCAA+TGG 0.443660 3_2:+60185871 None:intergenic
TCTCCCCTCACAGGCATCAA+TGG 0.445819 3_2:-60187111 Msa0414610:CDS
CCAACTATAGGCCATGGTTT+GGG 0.447196 3_2:+60187421 None:intergenic
TTCTTGCAGGAACTTGTGTT+AGG 0.448000 3_2:-60186412 Msa0414610:intron
GAAGTTCATATCATTTAGTA+CGG 0.448426 3_2:-60185999 Msa0414610:CDS
GCCAATTACATGATTCCAAA+AGG 0.452440 3_2:-60186151 Msa0414610:CDS
TTCAAGGGCAATGGTGGGAC+AGG 0.456375 3_2:+60187279 None:intergenic
AGTGCTCCATTGTTTAGTAA+TGG 0.468887 3_2:-60185651 Msa0414610:three_prime_UTR
GGCAATAGCAAAGCCAAGAT+TGG 0.469898 3_2:-60185816 Msa0414610:CDS
GGAAGGAATGATGGTGGTCC+TGG 0.472453 3_2:-60186923 Msa0414610:CDS
ATTGCCACTAGTGGCCCTCC+AGG 0.474108 3_2:+60185833 None:intergenic
GGCTTTGCTATTGCCACTAG+TGG 0.478391 3_2:+60185824 None:intergenic
ATCAATGGCTCGCAAACAAA+AGG 0.481322 3_2:-60187096 Msa0414610:CDS
ATAGGCCATGGTTTGGGACC+GGG 0.485668 3_2:+60187427 None:intergenic
GGAAAATGAATCAGTAAAGA+TGG 0.489831 3_2:-60185709 Msa0414610:three_prime_UTR
GGTTGTCCCGGAATTGTGCT+TGG 0.489912 3_2:-60185968 Msa0414610:CDS
CAGAAGTGTAGCTCATAGCT+TGG 0.490205 3_2:+60187572 None:intergenic
ACGGGAAGGCGTGGTTGTCC+CGG 0.492272 3_2:-60185980 Msa0414610:CDS
TAGGTGGATACATAAGATAA+TGG 0.492830 3_2:-60187362 Msa0414610:CDS
TAATCCTCCCCATGTTGCTA+TGG 0.499736 3_2:-60186188 Msa0414610:CDS
AATTAATATGCAAGGTTCAA+AGG 0.500582 3_2:+60187611 None:intergenic
TCCAATGGTGATAGATACCC+TGG 0.502264 3_2:-60185851 Msa0414610:CDS
TATAGGCCATGGTTTGGGAC+CGG 0.511486 3_2:+60187426 None:intergenic
AAGTCAAGTCCTCTAAAGAA+TGG 0.511797 3_2:+60186821 None:intergenic
CGCTACTCTCTCAGTCGTTT+AGG 0.513167 3_2:-60187540 Msa0414610:CDS
CAAGAATTCAAGGGCAATGG+TGG 0.514918 3_2:+60187273 None:intergenic
GGTTGCTCCATGGATTCGAT+TGG 0.516658 3_2:-60185916 Msa0414610:CDS
CTTTGATGGTCATGAGAGAA+AGG 0.517624 3_2:-60186801 Msa0414610:CDS
TTTGAGAAAATTAATATGCA+AGG 0.518387 3_2:+60187603 None:intergenic
TCCAGGGTATCTATCACCAT+TGG 0.521137 3_2:+60185850 None:intergenic
CATATAATCAGAAACACAAA+AGG 0.526650 3_2:+60186844 None:intergenic
ATGAATTGTTCTCCCCTCAC+AGG 0.526665 3_2:-60187120 Msa0414610:CDS
CCCAAACCATGGCCTATAGT+TGG 0.526778 3_2:-60187421 Msa0414610:CDS
TTGCAGGAACTTGTGTTAGG+TGG 0.527469 3_2:-60186409 Msa0414610:intron
ACAACGACTAGTCCAAGAAT+CGG 0.530665 3_2:-60186281 Msa0414610:CDS
GACCACTCCAATCGAATCCA+TGG 0.540359 3_2:+60185909 None:intergenic
CACAAGCTTTCACATAGTTG+AGG 0.544057 3_2:+60186248 None:intergenic
AATACAAGGTACTTTGGAGA+AGG 0.547495 3_2:-60186944 Msa0414610:CDS
TTTGGAGAAGGAAGGAATGA+TGG 0.549641 3_2:-60186932 Msa0414610:CDS
GAATAACATGGACATTTCCT+AGG 0.550006 3_2:+60187308 None:intergenic
CGAGCCATTGATGCCTGTGA+GGG 0.551166 3_2:+60187107 None:intergenic
ATTCTTTCTCAAGAATTCAA+GGG 0.552537 3_2:+60187264 None:intergenic
ATTATTGTTGCAATTTGATG+AGG 0.553985 3_2:-60186979 Msa0414610:CDS
TCTCAAGAATTCAAGGGCAA+TGG 0.555312 3_2:+60187270 None:intergenic
TTGCAAATAAACCTGCAACT+AGG 0.558715 3_2:-60187381 Msa0414610:CDS
TGGTCATGAGAGAAAGGTGA+AGG 0.559184 3_2:-60186795 Msa0414610:CDS
CATGTAGTTATAAGCAAACA+AGG 0.559435 3_2:-60186124 Msa0414610:CDS
ATGCAGATAATCTTATATAA+CGG 0.560380 3_2:-60185747 Msa0414610:three_prime_UTR
TTACACCCTTTGGGGAACAA+TGG 0.561271 3_2:-60187168 Msa0414610:CDS
GAACTTCTCAAGTATTCCAA+TGG 0.568654 3_2:-60185866 Msa0414610:CDS
ATCAGCTGTTACACCCTTTG+GGG 0.569284 3_2:-60187176 Msa0414610:CDS
AAGTTCATATCATTTAGTAC+GGG 0.569361 3_2:-60185998 Msa0414610:CDS
GAAGAATTGGATAGTATCGT+AGG 0.569366 3_2:-60186307 Msa0414610:CDS
TAACGGTGTTTGGTTAGTAA+GGG 0.570619 3_2:-60185730 Msa0414610:three_prime_UTR
CTCCATGGATTCGATTGGAG+TGG 0.571296 3_2:-60185911 Msa0414610:CDS
TTATTAGGCAGGTTGCTCCA+TGG 0.571812 3_2:-60185926 Msa0414610:CDS
GCAAATTCAGCTGCATGTGA+TGG 0.572339 3_2:+60186376 None:intergenic
TATGTTGTCCATAGCAACAT+GGG 0.572732 3_2:+60186180 None:intergenic
ATATTACCAACTATAGGCCA+TGG 0.576767 3_2:+60187415 None:intergenic
CAACTCCCATTACTAAACAA+TGG 0.577045 3_2:+60185645 None:intergenic
CAAGGTACTTTGGAGAAGGA+AGG 0.579507 3_2:-60186940 Msa0414610:CDS
TGATGGTGGTCCTGGTTTGG+AGG 0.582506 3_2:-60186915 Msa0414610:CDS
TGACTGTGATGTTATTAGGC+AGG 0.588410 3_2:-60185937 Msa0414610:CDS
GAAGGAGGCTATGAGTATTG+TGG 0.590435 3_2:-60186777 Msa0414610:CDS
TAATAACATCACAGTCATTG+TGG 0.592237 3_2:+60185943 None:intergenic
TCATATCATTTAGTACGGGA+AGG 0.593898 3_2:-60185994 Msa0414610:CDS
GAAATAGCGTGTATCCGCCT+AGG 0.594219 3_2:-60187325 Msa0414610:CDS
AAAGACTAGTGCTGATGCTG+AGG 0.599150 3_2:-60186699 Msa0414610:CDS
TCCACTGATATCATCAGCAA+AGG 0.601701 3_2:-60187208 Msa0414610:CDS
GGAACTTGTGTTAGGTGGAG+TGG 0.601887 3_2:-60186404 Msa0414610:CDS
TCAATGGTTGATGCATTAGG+AGG 0.603222 3_2:+60185887 None:intergenic
TGAATGTTAAGATTGTTACA+AGG 0.605730 3_2:-60187003 Msa0414610:CDS
CTATGTTGTCCATAGCAACA+TGG 0.606310 3_2:+60186179 None:intergenic
TGTTCAACTTCCTCCAAACC+AGG 0.606312 3_2:+60186905 None:intergenic
TCATTTAGTACGGGAAGGCG+TGG 0.607824 3_2:-60185989 Msa0414610:CDS
GATACTATCCAATTCTTCAG+TGG 0.608456 3_2:+60186312 None:intergenic
TTGCCACTAGTGGCCCTCCA+GGG 0.609613 3_2:+60185834 None:intergenic
GCTCGCAAACAAAAGGAATG+AGG 0.613585 3_2:-60187089 Msa0414610:CDS
TGTTGCTATGGACAACATAG+TGG 0.613681 3_2:-60186176 Msa0414610:CDS
CAAATAAACCTGCAACTAGG+TGG 0.622519 3_2:-60187378 Msa0414610:CDS
TACCACCCGGTCCCAAACCA+TGG 0.625239 3_2:-60187432 Msa0414610:CDS
ACCTTTGCTGATGATATCAG+TGG 0.632000 3_2:+60187207 None:intergenic
GCGAGCCATTGATGCCTGTG+AGG 0.633714 3_2:+60187106 None:intergenic
ATACCCTGGAGGGCCACTAG+TGG 0.635007 3_2:-60185837 Msa0414610:CDS
GCTGATGATATCAGTGGACA+TGG 0.636477 3_2:+60187213 None:intergenic
AAGAATTCAAGGGCAATGGT+GGG 0.637514 3_2:+60187274 None:intergenic
GGCCATGGTTTGGGACCGGG+TGG 0.649131 3_2:+60187430 None:intergenic
ATGGTGATAGATACCCTGGA+GGG 0.650089 3_2:-60185847 Msa0414610:CDS
GACAGGTAACAGGAATAACA+TGG 0.653652 3_2:+60187296 None:intergenic
TTGTCCATAGCAACATGGGG+AGG 0.672081 3_2:+60186184 None:intergenic
GTTATAAGCAAACAAGGACT+CGG 0.672869 3_2:-60186118 Msa0414610:CDS
TCATGAGAGAAAGGTGAAGG+AGG 0.683193 3_2:-60186792 Msa0414610:CDS
GGAGAAGGAAGGAATGATGG+TGG 0.694029 3_2:-60186929 Msa0414610:CDS
ACGACTGAGAGAGTAGCGGT+AGG 0.696421 3_2:+60187545 None:intergenic
ATGTTGTCCATAGCAACATG+GGG 0.713647 3_2:+60186181 None:intergenic
GAGCCATTGATGCCTGTGAG+GGG 0.718073 3_2:+60187108 None:intergenic
TAACATGGACATTTCCTAGG+CGG 0.719369 3_2:+60187311 None:intergenic
AATGGTGATAGATACCCTGG+AGG 0.740316 3_2:-60185848 Msa0414610:CDS
CTAAACGACTGAGAGAGTAG+CGG 0.745832 3_2:+60187541 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATATTTGATGTATT+CGG - chr3_2:60187633-60187652 Msa0414610:five_prime_UTR 10.0%
!! ATAAAAATATTTGATGTATT+CGG - chr3_2:60187633-60187652 Msa0414610:five_prime_UTR 10.0%
!!! TTAAAATTTAAAATTCTTGC+AGG - chr3_2:60186822-60186841 Msa0414610:CDS 15.0%
!!! TTAAAATTTAAAATTCTTGC+AGG - chr3_2:60186822-60186841 Msa0414610:CDS 15.0%
!!! AAGGAACAATAATTTTTAAG+TGG + chr3_2:60185620-60185639 None:intergenic 20.0%
!! TTTGAGAAAATTAATATGCA+AGG + chr3_2:60185647-60185666 None:intergenic 20.0%
!! TAAAAATTGTAATTGGATGA+AGG + chr3_2:60187041-60187060 None:intergenic 20.0%
!! ATGCAGATAATCTTATATAA+CGG - chr3_2:60187500-60187519 Msa0414610:CDS 20.0%
!!! AAGGAACAATAATTTTTAAG+TGG + chr3_2:60185620-60185639 None:intergenic 20.0%
!! TTTGAGAAAATTAATATGCA+AGG + chr3_2:60185647-60185666 None:intergenic 20.0%
!! TAAAAATTGTAATTGGATGA+AGG + chr3_2:60187041-60187060 None:intergenic 20.0%
!! ATGCAGATAATCTTATATAA+CGG - chr3_2:60187500-60187519 Msa0414610:CDS 20.0%
! AATTAATATGCAAGGTTCAA+AGG + chr3_2:60185639-60185658 None:intergenic 25.0%
! ATTCTTTCTCAAGAATTCAA+GGG + chr3_2:60185986-60186005 None:intergenic 25.0%
! TGTTGTAGACATAAAACATT+AGG + chr3_2:60186194-60186213 None:intergenic 25.0%
! TGCAAAAATGCAAATGATAA+TGG - chr3_2:60186216-60186235 Msa0414610:CDS 25.0%
! TGAATGTTAAGATTGTTACA+AGG - chr3_2:60186244-60186263 Msa0414610:CDS 25.0%
! ATTATTGTTGCAATTTGATG+AGG - chr3_2:60186268-60186287 Msa0414610:CDS 25.0%
!!! GGAAATTGGTTTTTAATACA+AGG - chr3_2:60186289-60186308 Msa0414610:CDS 25.0%
!!! GTTTTTAATACAAGGTACTT+TGG - chr3_2:60186297-60186316 Msa0414610:CDS 25.0%
! CATATAATCAGAAACACAAA+AGG + chr3_2:60186406-60186425 None:intergenic 25.0%
! TTGAGAAGAGAATTGAAAAA+TGG - chr3_2:60186514-60186533 Msa0414610:intron 25.0%
!! TTCTAGGAGTAAATTTCATT+CGG + chr3_2:60186767-60186786 None:intergenic 25.0%
! TTGATGCTACAATAATTTCT+AGG + chr3_2:60186783-60186802 None:intergenic 25.0%
! GGAGGATTAAAAATTGTAAT+TGG + chr3_2:60187048-60187067 None:intergenic 25.0%
! AATGATATGAACTTCAAATC+TGG + chr3_2:60187243-60187262 None:intergenic 25.0%
! GAAGTTCATATCATTTAGTA+CGG - chr3_2:60187248-60187267 Msa0414610:CDS 25.0%
! AAGTTCATATCATTTAGTAC+GGG - chr3_2:60187249-60187268 Msa0414610:CDS 25.0%
! TAATCTTATATAACGGTGTT+TGG - chr3_2:60187507-60187526 Msa0414610:CDS 25.0%
! AATTAATATGCAAGGTTCAA+AGG + chr3_2:60185639-60185658 None:intergenic 25.0%
! ATTCTTTCTCAAGAATTCAA+GGG + chr3_2:60185986-60186005 None:intergenic 25.0%
! TGTTGTAGACATAAAACATT+AGG + chr3_2:60186194-60186213 None:intergenic 25.0%
! TGCAAAAATGCAAATGATAA+TGG - chr3_2:60186216-60186235 Msa0414610:CDS 25.0%
! TGAATGTTAAGATTGTTACA+AGG - chr3_2:60186244-60186263 Msa0414610:CDS 25.0%
! ATTATTGTTGCAATTTGATG+AGG - chr3_2:60186268-60186287 Msa0414610:CDS 25.0%
!!! GGAAATTGGTTTTTAATACA+AGG - chr3_2:60186289-60186308 Msa0414610:CDS 25.0%
!!! GTTTTTAATACAAGGTACTT+TGG - chr3_2:60186297-60186316 Msa0414610:CDS 25.0%
! CATATAATCAGAAACACAAA+AGG + chr3_2:60186406-60186425 None:intergenic 25.0%
! TTGAGAAGAGAATTGAAAAA+TGG - chr3_2:60186514-60186533 Msa0414610:intron 25.0%
!! TTCTAGGAGTAAATTTCATT+CGG + chr3_2:60186767-60186786 None:intergenic 25.0%
! TTGATGCTACAATAATTTCT+AGG + chr3_2:60186783-60186802 None:intergenic 25.0%
! GGAGGATTAAAAATTGTAAT+TGG + chr3_2:60187048-60187067 None:intergenic 25.0%
! AATGATATGAACTTCAAATC+TGG + chr3_2:60187243-60187262 None:intergenic 25.0%
! GAAGTTCATATCATTTAGTA+CGG - chr3_2:60187248-60187267 Msa0414610:CDS 25.0%
! AAGTTCATATCATTTAGTAC+GGG - chr3_2:60187249-60187268 Msa0414610:CDS 25.0%
! TAATCTTATATAACGGTGTT+TGG - chr3_2:60187507-60187526 Msa0414610:CDS 25.0%
TCAGGAATATTACCAACTAT+AGG + chr3_2:60185841-60185860 None:intergenic 30.0%
TAGGTGGATACATAAGATAA+TGG - chr3_2:60185885-60185904 Msa0414610:CDS 30.0%
CATTCTTTCTCAAGAATTCA+AGG + chr3_2:60185987-60186006 None:intergenic 30.0%
TTGCAATTTGATGAGGAAAT+TGG - chr3_2:60186275-60186294 Msa0414610:CDS 30.0%
GATTATATGCCATTCTTTAG+AGG - chr3_2:60186417-60186436 Msa0414610:intron 30.0%
TCAATTCTCTTCTCAATGAT+TGG + chr3_2:60186510-60186529 None:intergenic 30.0%
!! TTTGTTGTTGGCATCTTTAA+GGG + chr3_2:60186595-60186614 None:intergenic 30.0%
ATTTCCTCTAACGTCAATAA+TGG + chr3_2:60186618-60186637 None:intergenic 30.0%
ATTGACGTTAGAGGAAATAA+AGG - chr3_2:60186620-60186639 Msa0414610:CDS 30.0%
!!! ACCTTTTGGAATCATGTAAT+TGG + chr3_2:60187100-60187119 None:intergenic 30.0%
! ATAACTACATGACTACCTTT+TGG + chr3_2:60187114-60187133 None:intergenic 30.0%
CATGTAGTTATAAGCAAACA+AGG - chr3_2:60187123-60187142 Msa0414610:CDS 30.0%
AACGCCATCTAAAAAATGAT+GGG - chr3_2:60187196-60187215 Msa0414610:CDS 30.0%
!!! TAGACCCATCATTTTTTAGA+TGG + chr3_2:60187203-60187222 None:intergenic 30.0%
!! TCTAAAAAATGATGGGTCTA+TGG - chr3_2:60187203-60187222 Msa0414610:CDS 30.0%
TAATAACATCACAGTCATTG+TGG + chr3_2:60187307-60187326 None:intergenic 30.0%
ACAATGACTGTGATGTTATT+AGG - chr3_2:60187306-60187325 Msa0414610:CDS 30.0%
TATAATTCTGATGCCAATCT+TGG + chr3_2:60187447-60187466 None:intergenic 30.0%
GGAAAATGAATCAGTAAAGA+TGG - chr3_2:60187538-60187557 Msa0414610:CDS 30.0%
TCAGGAATATTACCAACTAT+AGG + chr3_2:60185841-60185860 None:intergenic 30.0%
TAGGTGGATACATAAGATAA+TGG - chr3_2:60185885-60185904 Msa0414610:CDS 30.0%
CATTCTTTCTCAAGAATTCA+AGG + chr3_2:60185987-60186006 None:intergenic 30.0%
TTGCAATTTGATGAGGAAAT+TGG - chr3_2:60186275-60186294 Msa0414610:CDS 30.0%
GATTATATGCCATTCTTTAG+AGG - chr3_2:60186417-60186436 Msa0414610:intron 30.0%
TCAATTCTCTTCTCAATGAT+TGG + chr3_2:60186510-60186529 None:intergenic 30.0%
!! TTTGTTGTTGGCATCTTTAA+GGG + chr3_2:60186595-60186614 None:intergenic 30.0%
ATTTCCTCTAACGTCAATAA+TGG + chr3_2:60186618-60186637 None:intergenic 30.0%
ATTGACGTTAGAGGAAATAA+AGG - chr3_2:60186620-60186639 Msa0414610:CDS 30.0%
!!! ACCTTTTGGAATCATGTAAT+TGG + chr3_2:60187100-60187119 None:intergenic 30.0%
! ATAACTACATGACTACCTTT+TGG + chr3_2:60187114-60187133 None:intergenic 30.0%
CATGTAGTTATAAGCAAACA+AGG - chr3_2:60187123-60187142 Msa0414610:CDS 30.0%
AACGCCATCTAAAAAATGAT+GGG - chr3_2:60187196-60187215 Msa0414610:CDS 30.0%
!!! TAGACCCATCATTTTTTAGA+TGG + chr3_2:60187203-60187222 None:intergenic 30.0%
!! TCTAAAAAATGATGGGTCTA+TGG - chr3_2:60187203-60187222 Msa0414610:CDS 30.0%
TAATAACATCACAGTCATTG+TGG + chr3_2:60187307-60187326 None:intergenic 30.0%
ACAATGACTGTGATGTTATT+AGG - chr3_2:60187306-60187325 Msa0414610:CDS 30.0%
TATAATTCTGATGCCAATCT+TGG + chr3_2:60187447-60187466 None:intergenic 30.0%
GGAAAATGAATCAGTAAAGA+TGG - chr3_2:60187538-60187557 Msa0414610:CDS 30.0%
CTCAACAAAGTGGTATCTTA+TGG + chr3_2:60185776-60185795 None:intergenic 35.0%
!!! TTTTAGGGTTCTCAACAAAG+TGG + chr3_2:60185786-60185805 None:intergenic 35.0%
!!! GTGGTAGTTTGGCTTTTTTA+GGG + chr3_2:60185801-60185820 None:intergenic 35.0%
ATATTACCAACTATAGGCCA+TGG + chr3_2:60185835-60185854 None:intergenic 35.0%
GGTTTATTTGCAAGCATTTC+AGG + chr3_2:60185859-60185878 None:intergenic 35.0%
TTGCAAATAAACCTGCAACT+AGG - chr3_2:60185866-60185885 Msa0414610:CDS 35.0%
GAATAACATGGACATTTCCT+AGG + chr3_2:60185942-60185961 None:intergenic 35.0%
ATATCAGTGGACATGGATAT+TGG + chr3_2:60186030-60186049 None:intergenic 35.0%
TATCATCAGCAAAGGTTTCT+TGG - chr3_2:60186047-60186066 Msa0414610:CDS 35.0%
! TTTTTCCATTGTTCCCCAAA+GGG + chr3_2:60186087-60186106 None:intergenic 35.0%
!!! TTTTTTCCATTGTTCCCCAA+AGG + chr3_2:60186088-60186107 None:intergenic 35.0%
! AATACAAGGTACTTTGGAGA+AGG - chr3_2:60186303-60186322 Msa0414610:CDS 35.0%
! AAGTCAAGTCCTCTAAAGAA+TGG + chr3_2:60186429-60186448 None:intergenic 35.0%
TTTAGAGGACTTGACTTTGA+TGG - chr3_2:60186432-60186451 Msa0414610:intron 35.0%
!! GTTTGTTGTTGGCATCTTTA+AGG + chr3_2:60186596-60186615 None:intergenic 35.0%
!! CGTCAATAATGGTTTGTTGT+TGG + chr3_2:60186607-60186626 None:intergenic 35.0%
CAAACCATTATTGACGTTAG+AGG - chr3_2:60186611-60186630 Msa0414610:intron 35.0%
GATACTATCCAATTCTTCAG+TGG + chr3_2:60186938-60186957 None:intergenic 35.0%
GAAGAATTGGATAGTATCGT+AGG - chr3_2:60186940-60186959 Msa0414610:CDS 35.0%
TATGTTGTCCATAGCAACAT+GGG + chr3_2:60187070-60187089 None:intergenic 35.0%
GCCAATTACATGATTCCAAA+AGG - chr3_2:60187096-60187115 Msa0414610:CDS 35.0%
GTTATAAGCAAACAAGGACT+CGG - chr3_2:60187129-60187148 Msa0414610:CDS 35.0%
! AGAGCTTCATTCCAAACTTT+TGG + chr3_2:60187162-60187181 None:intergenic 35.0%
!!! TCATTTTTTAGATGGCGTTC+TGG + chr3_2:60187195-60187214 None:intergenic 35.0%
GAACGCCATCTAAAAAATGA+TGG - chr3_2:60187195-60187214 Msa0414610:CDS 35.0%
TCATATCATTTAGTACGGGA+AGG - chr3_2:60187253-60187272 Msa0414610:CDS 35.0%
! AGTTCAATGGTTGATGCATT+AGG + chr3_2:60187366-60187385 None:intergenic 35.0%
GGAATACTTGAGAAGTTCAA+TGG + chr3_2:60187379-60187398 None:intergenic 35.0%
GAACTTCTCAAGTATTCCAA+TGG - chr3_2:60187381-60187400 Msa0414610:CDS 35.0%
ATAACGGTGTTTGGTTAGTA+AGG - chr3_2:60187516-60187535 Msa0414610:CDS 35.0%
TAACGGTGTTTGGTTAGTAA+GGG - chr3_2:60187517-60187536 Msa0414610:CDS 35.0%
AGTGCTCCATTGTTTAGTAA+TGG - chr3_2:60187596-60187615 Msa0414610:exon 35.0%
GTGCTCCATTGTTTAGTAAT+GGG - chr3_2:60187597-60187616 Msa0414610:exon 35.0%
CAACTCCCATTACTAAACAA+TGG + chr3_2:60187605-60187624 None:intergenic 35.0%
CTCAACAAAGTGGTATCTTA+TGG + chr3_2:60185776-60185795 None:intergenic 35.0%
!!! TTTTAGGGTTCTCAACAAAG+TGG + chr3_2:60185786-60185805 None:intergenic 35.0%
!!! GTGGTAGTTTGGCTTTTTTA+GGG + chr3_2:60185801-60185820 None:intergenic 35.0%
ATATTACCAACTATAGGCCA+TGG + chr3_2:60185835-60185854 None:intergenic 35.0%
GGTTTATTTGCAAGCATTTC+AGG + chr3_2:60185859-60185878 None:intergenic 35.0%
TTGCAAATAAACCTGCAACT+AGG - chr3_2:60185866-60185885 Msa0414610:CDS 35.0%
GAATAACATGGACATTTCCT+AGG + chr3_2:60185942-60185961 None:intergenic 35.0%
ATATCAGTGGACATGGATAT+TGG + chr3_2:60186030-60186049 None:intergenic 35.0%
TATCATCAGCAAAGGTTTCT+TGG - chr3_2:60186047-60186066 Msa0414610:CDS 35.0%
! TTTTTCCATTGTTCCCCAAA+GGG + chr3_2:60186087-60186106 None:intergenic 35.0%
!!! TTTTTTCCATTGTTCCCCAA+AGG + chr3_2:60186088-60186107 None:intergenic 35.0%
! AATACAAGGTACTTTGGAGA+AGG - chr3_2:60186303-60186322 Msa0414610:CDS 35.0%
! AAGTCAAGTCCTCTAAAGAA+TGG + chr3_2:60186429-60186448 None:intergenic 35.0%
TTTAGAGGACTTGACTTTGA+TGG - chr3_2:60186432-60186451 Msa0414610:intron 35.0%
!! GTTTGTTGTTGGCATCTTTA+AGG + chr3_2:60186596-60186615 None:intergenic 35.0%
!! CGTCAATAATGGTTTGTTGT+TGG + chr3_2:60186607-60186626 None:intergenic 35.0%
CAAACCATTATTGACGTTAG+AGG - chr3_2:60186611-60186630 Msa0414610:intron 35.0%
GATACTATCCAATTCTTCAG+TGG + chr3_2:60186938-60186957 None:intergenic 35.0%
GAAGAATTGGATAGTATCGT+AGG - chr3_2:60186940-60186959 Msa0414610:CDS 35.0%
TATGTTGTCCATAGCAACAT+GGG + chr3_2:60187070-60187089 None:intergenic 35.0%
GCCAATTACATGATTCCAAA+AGG - chr3_2:60187096-60187115 Msa0414610:CDS 35.0%
GTTATAAGCAAACAAGGACT+CGG - chr3_2:60187129-60187148 Msa0414610:CDS 35.0%
! AGAGCTTCATTCCAAACTTT+TGG + chr3_2:60187162-60187181 None:intergenic 35.0%
!!! TCATTTTTTAGATGGCGTTC+TGG + chr3_2:60187195-60187214 None:intergenic 35.0%
GAACGCCATCTAAAAAATGA+TGG - chr3_2:60187195-60187214 Msa0414610:CDS 35.0%
TCATATCATTTAGTACGGGA+AGG - chr3_2:60187253-60187272 Msa0414610:CDS 35.0%
! AGTTCAATGGTTGATGCATT+AGG + chr3_2:60187366-60187385 None:intergenic 35.0%
GGAATACTTGAGAAGTTCAA+TGG + chr3_2:60187379-60187398 None:intergenic 35.0%
GAACTTCTCAAGTATTCCAA+TGG - chr3_2:60187381-60187400 Msa0414610:CDS 35.0%
ATAACGGTGTTTGGTTAGTA+AGG - chr3_2:60187516-60187535 Msa0414610:CDS 35.0%
TAACGGTGTTTGGTTAGTAA+GGG - chr3_2:60187517-60187536 Msa0414610:CDS 35.0%
AGTGCTCCATTGTTTAGTAA+TGG - chr3_2:60187596-60187615 Msa0414610:exon 35.0%
GTGCTCCATTGTTTAGTAAT+GGG - chr3_2:60187597-60187616 Msa0414610:exon 35.0%
CAACTCCCATTACTAAACAA+TGG + chr3_2:60187605-60187624 None:intergenic 35.0%
!!! GGTGGTAGTTTGGCTTTTTT+AGG + chr3_2:60185802-60185821 None:intergenic 40.0%
AAAAAAGCCAAACTACCACC+CGG - chr3_2:60185802-60185821 Msa0414610:CDS 40.0%
CAAATAAACCTGCAACTAGG+TGG - chr3_2:60185869-60185888 Msa0414610:CDS 40.0%
TTATGTATCCACCTAGTTGC+AGG + chr3_2:60185880-60185899 None:intergenic 40.0%
TAACATGGACATTTCCTAGG+CGG + chr3_2:60185939-60185958 None:intergenic 40.0%
GACAGGTAACAGGAATAACA+TGG + chr3_2:60185954-60185973 None:intergenic 40.0%
AAGAATTCAAGGGCAATGGT+GGG + chr3_2:60185976-60185995 None:intergenic 40.0%
TCTCAAGAATTCAAGGGCAA+TGG + chr3_2:60185980-60185999 None:intergenic 40.0%
TCCACTGATATCATCAGCAA+AGG - chr3_2:60186039-60186058 Msa0414610:CDS 40.0%
ACCTTTGCTGATGATATCAG+TGG + chr3_2:60186043-60186062 None:intergenic 40.0%
ATCAATGGCTCGCAAACAAA+AGG - chr3_2:60186151-60186170 Msa0414610:CDS 40.0%
TTTGGAGAAGGAAGGAATGA+TGG - chr3_2:60186315-60186334 Msa0414610:CDS 40.0%
! CTTTGATGGTCATGAGAGAA+AGG - chr3_2:60186446-60186465 Msa0414610:intron 40.0%
TTCTTGCAGGAACTTGTGTT+AGG - chr3_2:60186835-60186854 Msa0414610:CDS 40.0%
! ACAACGACTAGTCCAAGAAT+CGG - chr3_2:60186966-60186985 Msa0414610:CDS 40.0%
! GGTTTGGAATATCCGATTCT+TGG + chr3_2:60186981-60187000 None:intergenic 40.0%
GCTTTCACATAGTTGAGGTT+TGG + chr3_2:60186997-60187016 None:intergenic 40.0%
CACAAGCTTTCACATAGTTG+AGG + chr3_2:60187002-60187021 None:intergenic 40.0%
ATGTTGTCCATAGCAACATG+GGG + chr3_2:60187069-60187088 None:intergenic 40.0%
CTATGTTGTCCATAGCAACA+TGG + chr3_2:60187071-60187090 None:intergenic 40.0%
TGTTGCTATGGACAACATAG+TGG - chr3_2:60187071-60187090 Msa0414610:CDS 40.0%
TCGGACGAAATCCAAAAGTT+TGG - chr3_2:60187148-60187167 Msa0414610:CDS 40.0%
!! TGATGGGTCTATGGTAGTTT+TGG - chr3_2:60187212-60187231 Msa0414610:CDS 40.0%
TGACTGTGATGTTATTAGGC+AGG - chr3_2:60187310-60187329 Msa0414610:CDS 40.0%
! TCAATGGTTGATGCATTAGG+AGG + chr3_2:60187363-60187382 None:intergenic 40.0%
!!! GGTGGTAGTTTGGCTTTTTT+AGG + chr3_2:60185802-60185821 None:intergenic 40.0%
AAAAAAGCCAAACTACCACC+CGG - chr3_2:60185802-60185821 Msa0414610:CDS 40.0%
CAAATAAACCTGCAACTAGG+TGG - chr3_2:60185869-60185888 Msa0414610:CDS 40.0%
TTATGTATCCACCTAGTTGC+AGG + chr3_2:60185880-60185899 None:intergenic 40.0%
TAACATGGACATTTCCTAGG+CGG + chr3_2:60185939-60185958 None:intergenic 40.0%
GACAGGTAACAGGAATAACA+TGG + chr3_2:60185954-60185973 None:intergenic 40.0%
AAGAATTCAAGGGCAATGGT+GGG + chr3_2:60185976-60185995 None:intergenic 40.0%
TCTCAAGAATTCAAGGGCAA+TGG + chr3_2:60185980-60185999 None:intergenic 40.0%
TCCACTGATATCATCAGCAA+AGG - chr3_2:60186039-60186058 Msa0414610:CDS 40.0%
ACCTTTGCTGATGATATCAG+TGG + chr3_2:60186043-60186062 None:intergenic 40.0%
ATCAATGGCTCGCAAACAAA+AGG - chr3_2:60186151-60186170 Msa0414610:CDS 40.0%
TTTGGAGAAGGAAGGAATGA+TGG - chr3_2:60186315-60186334 Msa0414610:CDS 40.0%
! CTTTGATGGTCATGAGAGAA+AGG - chr3_2:60186446-60186465 Msa0414610:intron 40.0%
TTCTTGCAGGAACTTGTGTT+AGG - chr3_2:60186835-60186854 Msa0414610:CDS 40.0%
! ACAACGACTAGTCCAAGAAT+CGG - chr3_2:60186966-60186985 Msa0414610:CDS 40.0%
! GGTTTGGAATATCCGATTCT+TGG + chr3_2:60186981-60187000 None:intergenic 40.0%
GCTTTCACATAGTTGAGGTT+TGG + chr3_2:60186997-60187016 None:intergenic 40.0%
CACAAGCTTTCACATAGTTG+AGG + chr3_2:60187002-60187021 None:intergenic 40.0%
ATGTTGTCCATAGCAACATG+GGG + chr3_2:60187069-60187088 None:intergenic 40.0%
CTATGTTGTCCATAGCAACA+TGG + chr3_2:60187071-60187090 None:intergenic 40.0%
TGTTGCTATGGACAACATAG+TGG - chr3_2:60187071-60187090 Msa0414610:CDS 40.0%
TCGGACGAAATCCAAAAGTT+TGG - chr3_2:60187148-60187167 Msa0414610:CDS 40.0%
!! TGATGGGTCTATGGTAGTTT+TGG - chr3_2:60187212-60187231 Msa0414610:CDS 40.0%
TGACTGTGATGTTATTAGGC+AGG - chr3_2:60187310-60187329 Msa0414610:CDS 40.0%
! TCAATGGTTGATGCATTAGG+AGG + chr3_2:60187363-60187382 None:intergenic 40.0%
! CAGAAGTGTAGCTCATAGCT+TGG + chr3_2:60185678-60185697 None:intergenic 45.0%
CAAGCTATGAGCTACACTTC+TGG - chr3_2:60185676-60185695 Msa0414610:three_prime_UTR 45.0%
CTAAACGACTGAGAGAGTAG+CGG + chr3_2:60185709-60185728 None:intergenic 45.0%
CCAACTATAGGCCATGGTTT+GGG + chr3_2:60185829-60185848 None:intergenic 45.0%
ACCAACTATAGGCCATGGTT+TGG + chr3_2:60185830-60185849 None:intergenic 45.0%
CAAGAATTCAAGGGCAATGG+TGG + chr3_2:60185977-60185996 None:intergenic 45.0%
GCTGATGATATCAGTGGACA+TGG + chr3_2:60186037-60186056 None:intergenic 45.0%
CATCAGCTGTTACACCCTTT+GGG - chr3_2:60186070-60186089 Msa0414610:CDS 45.0%
ATCAGCTGTTACACCCTTTG+GGG - chr3_2:60186071-60186090 Msa0414610:CDS 45.0%
! TTACACCCTTTGGGGAACAA+TGG - chr3_2:60186079-60186098 Msa0414610:CDS 45.0%
ATGAATTGTTCTCCCCTCAC+AGG - chr3_2:60186127-60186146 Msa0414610:CDS 45.0%
GCTCGCAAACAAAAGGAATG+AGG - chr3_2:60186158-60186177 Msa0414610:CDS 45.0%
! CAAGGTACTTTGGAGAAGGA+AGG - chr3_2:60186307-60186326 Msa0414610:CDS 45.0%
TGTTCAACTTCCTCCAAACC+AGG + chr3_2:60186345-60186364 None:intergenic 45.0%
TGGTCATGAGAGAAAGGTGA+AGG - chr3_2:60186452-60186471 Msa0414610:intron 45.0%
TCATGAGAGAAAGGTGAAGG+AGG - chr3_2:60186455-60186474 Msa0414610:intron 45.0%
! GAAGGAGGCTATGAGTATTG+TGG - chr3_2:60186470-60186489 Msa0414610:intron 45.0%
!! AAAGACTAGTGCTGATGCTG+AGG - chr3_2:60186548-60186567 Msa0414610:intron 45.0%
TTGCAGGAACTTGTGTTAGG+TGG - chr3_2:60186838-60186857 Msa0414610:CDS 45.0%
GCAAATTCAGCTGCATGTGA+TGG + chr3_2:60186874-60186893 None:intergenic 45.0%
GTGGCTCGTTGAAGTAAATC+TGG + chr3_2:60186919-60186938 None:intergenic 45.0%
TCAACGAGCCACTGAAGAAT+TGG - chr3_2:60186927-60186946 Msa0414610:CDS 45.0%
TAATCCTCCCCATGTTGCTA+TGG - chr3_2:60187059-60187078 Msa0414610:CDS 45.0%
TGTGGTTCCAAGCACAATTC+CGG + chr3_2:60187289-60187308 None:intergenic 45.0%
TTATTAGGCAGGTTGCTCCA+TGG - chr3_2:60187321-60187340 Msa0414610:CDS 45.0%
TCCAATGGTGATAGATACCC+TGG - chr3_2:60187396-60187415 Msa0414610:CDS 45.0%
! TCCAGGGTATCTATCACCAT+TGG + chr3_2:60187400-60187419 None:intergenic 45.0%
AATGGTGATAGATACCCTGG+AGG - chr3_2:60187399-60187418 Msa0414610:CDS 45.0%
ATGGTGATAGATACCCTGGA+GGG - chr3_2:60187400-60187419 Msa0414610:CDS 45.0%
GGCAATAGCAAAGCCAAGAT+TGG - chr3_2:60187431-60187450 Msa0414610:CDS 45.0%
! CAGAAGTGTAGCTCATAGCT+TGG + chr3_2:60185678-60185697 None:intergenic 45.0%
CAAGCTATGAGCTACACTTC+TGG - chr3_2:60185676-60185695 Msa0414610:three_prime_UTR 45.0%
CTAAACGACTGAGAGAGTAG+CGG + chr3_2:60185709-60185728 None:intergenic 45.0%
CCAACTATAGGCCATGGTTT+GGG + chr3_2:60185829-60185848 None:intergenic 45.0%
ACCAACTATAGGCCATGGTT+TGG + chr3_2:60185830-60185849 None:intergenic 45.0%
CAAGAATTCAAGGGCAATGG+TGG + chr3_2:60185977-60185996 None:intergenic 45.0%
GCTGATGATATCAGTGGACA+TGG + chr3_2:60186037-60186056 None:intergenic 45.0%
CATCAGCTGTTACACCCTTT+GGG - chr3_2:60186070-60186089 Msa0414610:CDS 45.0%
ATCAGCTGTTACACCCTTTG+GGG - chr3_2:60186071-60186090 Msa0414610:CDS 45.0%
! TTACACCCTTTGGGGAACAA+TGG - chr3_2:60186079-60186098 Msa0414610:CDS 45.0%
ATGAATTGTTCTCCCCTCAC+AGG - chr3_2:60186127-60186146 Msa0414610:CDS 45.0%
GCTCGCAAACAAAAGGAATG+AGG - chr3_2:60186158-60186177 Msa0414610:CDS 45.0%
! CAAGGTACTTTGGAGAAGGA+AGG - chr3_2:60186307-60186326 Msa0414610:CDS 45.0%
TGTTCAACTTCCTCCAAACC+AGG + chr3_2:60186345-60186364 None:intergenic 45.0%
TGGTCATGAGAGAAAGGTGA+AGG - chr3_2:60186452-60186471 Msa0414610:intron 45.0%
TCATGAGAGAAAGGTGAAGG+AGG - chr3_2:60186455-60186474 Msa0414610:intron 45.0%
! GAAGGAGGCTATGAGTATTG+TGG - chr3_2:60186470-60186489 Msa0414610:intron 45.0%
!! AAAGACTAGTGCTGATGCTG+AGG - chr3_2:60186548-60186567 Msa0414610:intron 45.0%
TTGCAGGAACTTGTGTTAGG+TGG - chr3_2:60186838-60186857 Msa0414610:CDS 45.0%
GCAAATTCAGCTGCATGTGA+TGG + chr3_2:60186874-60186893 None:intergenic 45.0%
GTGGCTCGTTGAAGTAAATC+TGG + chr3_2:60186919-60186938 None:intergenic 45.0%
TCAACGAGCCACTGAAGAAT+TGG - chr3_2:60186927-60186946 Msa0414610:CDS 45.0%
TAATCCTCCCCATGTTGCTA+TGG - chr3_2:60187059-60187078 Msa0414610:CDS 45.0%
TGTGGTTCCAAGCACAATTC+CGG + chr3_2:60187289-60187308 None:intergenic 45.0%
TTATTAGGCAGGTTGCTCCA+TGG - chr3_2:60187321-60187340 Msa0414610:CDS 45.0%
TCCAATGGTGATAGATACCC+TGG - chr3_2:60187396-60187415 Msa0414610:CDS 45.0%
! TCCAGGGTATCTATCACCAT+TGG + chr3_2:60187400-60187419 None:intergenic 45.0%
AATGGTGATAGATACCCTGG+AGG - chr3_2:60187399-60187418 Msa0414610:CDS 45.0%
ATGGTGATAGATACCCTGGA+GGG - chr3_2:60187400-60187419 Msa0414610:CDS 45.0%
GGCAATAGCAAAGCCAAGAT+TGG - chr3_2:60187431-60187450 Msa0414610:CDS 45.0%
!! TAAAACTAAAAAATATAATA+AGG + chr3_2:60185741-60185760 None:intergenic 5.0%
!!! TATTATATTTTTTAGTTTTA+TGG - chr3_2:60185741-60185760 Msa0414610:three_prime_UTR 5.0%
!!! TTAAATTTTCAAATATTTTA+TGG + chr3_2:60187474-60187493 None:intergenic 5.0%
!! AAATATTTGAAAATTTAATA+AGG - chr3_2:60187476-60187495 Msa0414610:CDS 5.0%
!! TAAAACTAAAAAATATAATA+AGG + chr3_2:60185741-60185760 None:intergenic 5.0%
!!! TATTATATTTTTTAGTTTTA+TGG - chr3_2:60185741-60185760 Msa0414610:three_prime_UTR 5.0%
!!! TTAAATTTTCAAATATTTTA+TGG + chr3_2:60187474-60187493 None:intergenic 5.0%
!! AAATATTTGAAAATTTAATA+AGG - chr3_2:60187476-60187495 Msa0414610:CDS 5.0%
CGCTACTCTCTCAGTCGTTT+AGG - chr3_2:60185707-60185726 Msa0414610:three_prime_UTR 50.0%
! TATAGGCCATGGTTTGGGAC+CGG + chr3_2:60185824-60185843 None:intergenic 50.0%
CCCAAACCATGGCCTATAGT+TGG - chr3_2:60185826-60185845 Msa0414610:CDS 50.0%
GAAATAGCGTGTATCCGCCT+AGG - chr3_2:60185922-60185941 Msa0414610:CDS 50.0%
GCATCAGCTGTTACACCCTT+TGG - chr3_2:60186069-60186088 Msa0414610:CDS 50.0%
GGAGAAGGAAGGAATGATGG+TGG - chr3_2:60186318-60186337 Msa0414610:CDS 50.0%
!! GAATGATGGTGGTCCTGGTT+TGG - chr3_2:60186329-60186348 Msa0414610:CDS 50.0%
GGAACTTGTGTTAGGTGGAG+TGG - chr3_2:60186843-60186862 Msa0414610:CDS 50.0%
TTGTCCATAGCAACATGGGG+AGG + chr3_2:60187066-60187085 None:intergenic 50.0%
TCATTTAGTACGGGAAGGCG+TGG - chr3_2:60187258-60187277 Msa0414610:CDS 50.0%
GTGGTTCCAAGCACAATTCC+GGG + chr3_2:60187288-60187307 None:intergenic 50.0%
GGTTGCTCCATGGATTCGAT+TGG - chr3_2:60187331-60187350 Msa0414610:CDS 50.0%
CTCCATGGATTCGATTGGAG+TGG - chr3_2:60187336-60187355 Msa0414610:CDS 50.0%
GACCACTCCAATCGAATCCA+TGG + chr3_2:60187341-60187360 None:intergenic 50.0%
!! GGCTTTGCTATTGCCACTAG+TGG + chr3_2:60187426-60187445 None:intergenic 50.0%
CGCTACTCTCTCAGTCGTTT+AGG - chr3_2:60185707-60185726 Msa0414610:three_prime_UTR 50.0%
! TATAGGCCATGGTTTGGGAC+CGG + chr3_2:60185824-60185843 None:intergenic 50.0%
CCCAAACCATGGCCTATAGT+TGG - chr3_2:60185826-60185845 Msa0414610:CDS 50.0%
GAAATAGCGTGTATCCGCCT+AGG - chr3_2:60185922-60185941 Msa0414610:CDS 50.0%
GCATCAGCTGTTACACCCTT+TGG - chr3_2:60186069-60186088 Msa0414610:CDS 50.0%
GGAGAAGGAAGGAATGATGG+TGG - chr3_2:60186318-60186337 Msa0414610:CDS 50.0%
!! GAATGATGGTGGTCCTGGTT+TGG - chr3_2:60186329-60186348 Msa0414610:CDS 50.0%
GGAACTTGTGTTAGGTGGAG+TGG - chr3_2:60186843-60186862 Msa0414610:CDS 50.0%
TTGTCCATAGCAACATGGGG+AGG + chr3_2:60187066-60187085 None:intergenic 50.0%
TCATTTAGTACGGGAAGGCG+TGG - chr3_2:60187258-60187277 Msa0414610:CDS 50.0%
GTGGTTCCAAGCACAATTCC+GGG + chr3_2:60187288-60187307 None:intergenic 50.0%
GGTTGCTCCATGGATTCGAT+TGG - chr3_2:60187331-60187350 Msa0414610:CDS 50.0%
CTCCATGGATTCGATTGGAG+TGG - chr3_2:60187336-60187355 Msa0414610:CDS 50.0%
GACCACTCCAATCGAATCCA+TGG + chr3_2:60187341-60187360 None:intergenic 50.0%
!! GGCTTTGCTATTGCCACTAG+TGG + chr3_2:60187426-60187445 None:intergenic 50.0%
ACGACTGAGAGAGTAGCGGT+AGG + chr3_2:60185705-60185724 None:intergenic 55.0%
! TTTGGGACCGGGTGGTAGTT+TGG + chr3_2:60185812-60185831 None:intergenic 55.0%
! ATAGGCCATGGTTTGGGACC+GGG + chr3_2:60185823-60185842 None:intergenic 55.0%
! GCAATGGTGGGACAGGTAAC+AGG + chr3_2:60185964-60185983 None:intergenic 55.0%
! TTCAAGGGCAATGGTGGGAC+AGG + chr3_2:60185971-60185990 None:intergenic 55.0%
TCTCCCCTCACAGGCATCAA+TGG - chr3_2:60186136-60186155 Msa0414610:CDS 55.0%
GAGCCATTGATGCCTGTGAG+GGG + chr3_2:60186142-60186161 None:intergenic 55.0%
CGAGCCATTGATGCCTGTGA+GGG + chr3_2:60186143-60186162 None:intergenic 55.0%
!! GGAAGGAATGATGGTGGTCC+TGG - chr3_2:60186324-60186343 Msa0414610:CDS 55.0%
!! TGATGGTGGTCCTGGTTTGG+AGG - chr3_2:60186332-60186351 Msa0414610:CDS 55.0%
GGTTGTCCCGGAATTGTGCT+TGG - chr3_2:60187279-60187298 Msa0414610:CDS 55.0%
ACGACTGAGAGAGTAGCGGT+AGG + chr3_2:60185705-60185724 None:intergenic 55.0%
! TTTGGGACCGGGTGGTAGTT+TGG + chr3_2:60185812-60185831 None:intergenic 55.0%
! ATAGGCCATGGTTTGGGACC+GGG + chr3_2:60185823-60185842 None:intergenic 55.0%
! GCAATGGTGGGACAGGTAAC+AGG + chr3_2:60185964-60185983 None:intergenic 55.0%
! TTCAAGGGCAATGGTGGGAC+AGG + chr3_2:60185971-60185990 None:intergenic 55.0%
TCTCCCCTCACAGGCATCAA+TGG - chr3_2:60186136-60186155 Msa0414610:CDS 55.0%
GAGCCATTGATGCCTGTGAG+GGG + chr3_2:60186142-60186161 None:intergenic 55.0%
CGAGCCATTGATGCCTGTGA+GGG + chr3_2:60186143-60186162 None:intergenic 55.0%
!! GGAAGGAATGATGGTGGTCC+TGG - chr3_2:60186324-60186343 Msa0414610:CDS 55.0%
!! TGATGGTGGTCCTGGTTTGG+AGG - chr3_2:60186332-60186351 Msa0414610:CDS 55.0%
GGTTGTCCCGGAATTGTGCT+TGG - chr3_2:60187279-60187298 Msa0414610:CDS 55.0%
TACCACCCGGTCCCAAACCA+TGG - chr3_2:60185815-60185834 Msa0414610:CDS 60.0%
GCGAGCCATTGATGCCTGTG+AGG + chr3_2:60186144-60186163 None:intergenic 60.0%
ATACCCTGGAGGGCCACTAG+TGG - chr3_2:60187410-60187429 Msa0414610:CDS 60.0%
TTGCCACTAGTGGCCCTCCA+GGG + chr3_2:60187416-60187435 None:intergenic 60.0%
ATTGCCACTAGTGGCCCTCC+AGG + chr3_2:60187417-60187436 None:intergenic 60.0%
TACCACCCGGTCCCAAACCA+TGG - chr3_2:60185815-60185834 Msa0414610:CDS 60.0%
GCGAGCCATTGATGCCTGTG+AGG + chr3_2:60186144-60186163 None:intergenic 60.0%
ATACCCTGGAGGGCCACTAG+TGG - chr3_2:60187410-60187429 Msa0414610:CDS 60.0%
TTGCCACTAGTGGCCCTCCA+GGG + chr3_2:60187416-60187435 None:intergenic 60.0%
ATTGCCACTAGTGGCCCTCC+AGG + chr3_2:60187417-60187436 None:intergenic 60.0%
! ACGGGAAGGCGTGGTTGTCC+CGG - chr3_2:60187267-60187286 Msa0414610:CDS 65.0%
! ACGGGAAGGCGTGGTTGTCC+CGG - chr3_2:60187267-60187286 Msa0414610:CDS 65.0%
! GGCCATGGTTTGGGACCGGG+TGG + chr3_2:60185820-60185839 None:intergenic 70.0%
! GGCCATGGTTTGGGACCGGG+TGG + chr3_2:60185820-60185839 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 60185613 60187656 60185613 ID=Msa0414610;Name=Msa0414610
chr3_2 mRNA 60185613 60187656 60185613 ID=Msa0414610-mRNA-1;Parent=Msa0414610;Name=Msa0414610-mRNA-1;_AED=0.03;_eAED=0.03;_QI=54|1|1|1|1|1|2|180|539
chr3_2 exon 60185613 60186425 60185613 ID=Msa0414610-mRNA-1:exon:12530;Parent=Msa0414610-mRNA-1
chr3_2 exon 60186616 60187656 60186616 ID=Msa0414610-mRNA-1:exon:12529;Parent=Msa0414610-mRNA-1
chr3_2 five_prime_UTR 60187603 60187656 60187603 ID=Msa0414610-mRNA-1:five_prime_utr;Parent=Msa0414610-mRNA-1
chr3_2 CDS 60186616 60187602 60186616 ID=Msa0414610-mRNA-1:cds;Parent=Msa0414610-mRNA-1
chr3_2 CDS 60185793 60186425 60185793 ID=Msa0414610-mRNA-1:cds;Parent=Msa0414610-mRNA-1
chr3_2 three_prime_UTR 60185613 60185792 60185613 ID=Msa0414610-mRNA-1:three_prime_utr;Parent=Msa0414610-mRNA-1
Gene Sequence

>Msa0414610

ATGCTTTTCCAAGCTATGAGCTACACTTCTGGTTTCCTACCGCTACTCTCTCAGTCGTTTAGGCATCTTTTCCTTATTATATTTTTTAGTTTTATGGTAATCAAAACCATAAGATACCACTTTGTTGAGAACCCTAAAAAAGCCAAACTACCACCCGGTCCCAAACCATGGCCTATAGTTGGTAATATTCCTGAAATGCTTGCAAATAAACCTGCAACTAGGTGGATACATAAGATAATGGAAGAATTGAACACTGAAATAGCGTGTATCCGCCTAGGAAATGTCCATGTTATTCCTGTTACCTGTCCCACCATTGCCCTTGAATTCTTGAGAAAGAATGATGCTACTTTTGCATCAAGACCAATATCCATGTCCACTGATATCATCAGCAAAGGTTTCTTGGCATCAGCTGTTACACCCTTTGGGGAACAATGGAAAAAAATGAAAAAAATATTTGTTAATGAATTGTTCTCCCCTCACAGGCATCAATGGCTCGCAAACAAAAGGAATGAGGAAGCTGATAACCTAATGTTTTATGTCTACAACAAATGCAAAAATGCAAATGATAATGGTCTTGTGAATGTTAAGATTGTTACAAGGCATTATTGTTGCAATTTGATGAGGAAATTGGTTTTTAATACAAGGTACTTTGGAGAAGGAAGGAATGATGGTGGTCCTGGTTTGGAGGAAGTTGAACATGTAGATGCTATTTTCACATTGCTTAGATATGTTTTTGCCTTTTGTGTTTCTGATTATATGCCATTCTTTAGAGGACTTGACTTTGATGGTCATGAGAGAAAGGTGAAGGAGGCTATGAGTATTGTGGACAAGTATAATGATCCAATCATTGAGAAGAGAATTGAAAAATGGAAAGATGAATCAAAGACTAGTGCTGATGCTGAGGACTTACTTGATATTCTAATCTCCCTTAAAGATGCCAACAACAAACCATTATTGACGTTAGAGGAAATAAAGGCTCAAGCTCTAGAACTTGTGTTAGGTGGAGTGGACAATCCATCACATGCAGCTGAATTTGCAATAGCAGAAATGATAAATCAGCCAGATTTACTTCAACGAGCCACTGAAGAATTGGATAGTATCGTAGGAAAACAACGACTAGTCCAAGAATCGGATATTCCAAACCTCAACTATGTGAAAGCTTGTGCTAAAGAAGCTTTTCGCCTTCATCCAATTACAATTTTTAATCCTCCCCATGTTGCTATGGACAACATAGTGGTTGCCAATTACATGATTCCAAAAGGTAGTCATGTAGTTATAAGCAAACAAGGACTCGGACGAAATCCAAAAGTTTGGAATGAAGCTCTCAAATTTAAACCAGAACGCCATCTAAAAAATGATGGGTCTATGGTAGTTTTGGCAGAACCAGATTTGAAGTTCATATCATTTAGTACGGGAAGGCGTGGTTGTCCCGGAATTGTGCTTGGAACCACAATGACTGTGATGTTATTAGGCAGGTTGCTCCATGGATTCGATTGGAGTGGTCCTCCTAATGCATCAACCATTGAACTTCTCAAGTATTCCAATGGTGATAGATACCCTGGAGGGCCACTAGTGGCAATAGCAAAGCCAAGATTGGCATCAGAATTATATCATCCATAA
Protein sequence

>Msa0414610

MLFQAMSYTSGFLPLLSQSFRHLFLIIFFSFMVIKTIRYHFVENPKKAKLPPGPKPWPIVGNIPEMLANKPATRWIHKIMEELNTEIACIRLGNVHVIPVTCPTIALEFLRKNDATFASRPISMSTDIISKGFLASAVTPFGEQWKKMKKIFVNELFSPHRHQWLANKRNEEADNLMFYVYNKCKNANDNGLVNVKIVTRHYCCNLMRKLVFNTRYFGEGRNDGGPGLEEVEHVDAIFTLLRYVFAFCVSDYMPFFRGLDFDGHERKVKEAMSIVDKYNDPIIEKRIEKWKDESKTSADAEDLLDILISLKDANNKPLLTLEEIKAQALELVLGGVDNPSHAAEFAIAEMINQPDLLQRATEELDSIVGKQRLVQESDIPNLNYVKACAKEAFRLHPITIFNPPHVAMDNIVVANYMIPKGSHVVISKQGLGRNPKVWNEALKFKPERHLKNDGSMVVLAEPDLKFISFSTGRRGCPGIVLGTTMTVMLLGRLLHGFDWSGPPNASTIELLKYSNGDRYPGGPLVAIAKPRLASELYHP*