AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0459440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0459440 MtrunA17_Chr3g0107611 92.579 539 40 0 1 539 1 539 0.0 1041
Msa0459440 MtrunA17_Chr3g0107541 68.156 537 165 3 1 537 1 531 0.0 736
Msa0459440 MtrunA17_Chr8g0370651 58.621 522 213 2 16 537 10 528 0.0 642
Msa0459440 MtrunA17_Chr8g0370641 57.306 527 219 4 12 537 3 524 0.0 633
Msa0459440 MtrunA17_Chr3g0107561 71.028 321 88 2 6 326 1 316 8.03e-171 486
Msa0459440 MtrunA17_Chr3g0105751 66.775 307 96 3 24 329 20 321 1.87e-151 439
Msa0459440 MtrunA17_Chr3g0107581 90.132 152 12 1 80 231 1 149 3.58e-98 293
Msa0459440 MtrunA17_Chr3g0107551 66.827 208 68 1 330 537 4 210 4.52e-96 290
Msa0459440 MtrunA17_Chr7g0254641 33.205 518 320 11 33 537 16 520 1.31e-88 282
Msa0459440 MtrunA17_Chr3g0105761 61.836 207 76 2 332 538 1 204 3.03e-87 268
Msa0459440 MtrunA17_Chr8g0344151 31.781 494 318 12 47 537 33 510 3.05e-74 244
Msa0459440 MtrunA17_Chr8g0344191 31.418 522 333 14 19 537 45 544 6.44e-74 244
Msa0459440 MtrunA17_Chr8g0344181 31.781 494 318 12 47 537 35 512 9.29e-71 235
Msa0459440 MtrunA17_Chr3g0086651 31.967 488 307 8 59 537 41 512 1.12e-69 232
Msa0459440 MtrunA17_Chr3g0086661 31.762 488 308 8 59 537 41 512 9.83e-69 230
Msa0459440 MtrunA17_Chr7g0255531 29.828 523 340 10 23 539 3 504 3.15e-67 226
Msa0459440 MtrunA17_Chr3g0094171 28.952 525 354 9 16 537 5 513 6.65e-67 225
Msa0459440 MtrunA17_Chr5g0403351 28.279 488 320 9 23 502 7 472 5.87e-65 219
Msa0459440 MtrunA17_Chr4g0057001 29.109 505 332 9 33 533 33 515 9.45e-65 219
Msa0459440 MtrunA17_Chr8g0372341 54.000 200 92 0 16 215 10 209 1.08e-64 209
Msa0459440 MtrunA17_Chr2g0310381 28.016 514 346 9 23 532 1 494 1.18e-64 218
Msa0459440 MtrunA17_Chr8g0382901 29.293 495 319 10 46 534 488 957 1.46e-64 226
Msa0459440 MtrunA17_Chr8g0382901 28.482 481 305 8 24 502 1 444 2.03e-60 215
Msa0459440 MtrunA17_Chr3g0116681 28.489 523 339 14 16 530 7 502 3.90e-64 217
Msa0459440 MtrunA17_Chr6g0484811 28.947 532 342 13 15 534 1 508 2.17e-63 215
Msa0459440 MtrunA17_Chr3g0086691 30.832 493 306 9 59 537 41 512 1.20e-62 214
Msa0459440 MtrunA17_Chr2g0310391 27.043 514 351 9 23 532 1 494 2.23e-62 212
Msa0459440 MtrunA17_Chr4g0061381 29.897 485 319 7 59 537 40 509 4.31e-62 212
Msa0459440 MtrunA17_Chr3g0101661 29.303 488 312 8 23 502 11 473 5.82e-62 212
Msa0459440 MtrunA17_Chr8g0339311 28.817 524 345 8 32 538 16 528 1.23e-61 211
Msa0459440 MtrunA17_Chr4g0053621 27.143 490 324 9 16 499 1 463 1.28e-61 211
Msa0459440 MtrunA17_Chr3g0101731 26.389 504 339 9 13 510 1 478 6.40e-61 209
Msa0459440 MtrunA17_Chr3g0116741 27.755 490 325 8 25 509 26 491 1.17e-60 208
Msa0459440 MtrunA17_Chr1g0200961 29.545 484 318 8 27 506 6 470 3.13e-60 207
Msa0459440 MtrunA17_Chr3g0101611 29.399 466 289 12 45 499 33 469 4.89e-60 206
Msa0459440 MtrunA17_Chr6g0466331 28.776 490 322 9 19 502 2 470 7.09e-60 206
Msa0459440 MtrunA17_Chr6g0451781 28.854 506 346 9 38 537 64 561 8.12e-60 207
Msa0459440 MtrunA17_Chr6g0484841 28.632 475 301 10 39 502 26 473 1.19e-59 205
Msa0459440 MtrunA17_Chr6g0451751 28.088 502 345 7 44 537 35 528 1.80e-59 206
Msa0459440 MtrunA17_Chr6g0465511 28.776 490 322 9 19 502 2 470 1.84e-59 205
Msa0459440 MtrunA17_Chr5g0395321 29.039 489 303 12 19 499 11 463 1.97e-59 206
Msa0459440 MtrunA17_Chr6g0466901 28.046 517 362 8 26 537 10 521 2.12e-59 205
Msa0459440 MtrunA17_Chr3g0101701 28.893 488 315 9 23 502 11 474 2.36e-59 204
Msa0459440 MtrunA17_Chr3g0082701 29.368 538 360 11 13 538 1 530 3.01e-59 205
Msa0459440 MtrunA17_Chr5g0395331 29.645 479 303 12 27 499 20 470 3.75e-59 204
Msa0459440 MtrunA17_Chr5g0445461 28.310 491 325 7 23 510 11 477 3.78e-59 204
Msa0459440 MtrunA17_Chr8g0361471 28.081 495 329 9 19 507 2 475 6.30e-59 203
Msa0459440 MtrunA17_Chr4g0056951 29.268 451 297 8 87 533 78 510 9.27e-59 203
Msa0459440 MtrunA17_Chr4g0058231 26.112 517 349 11 23 528 1 495 1.12e-58 202
Msa0459440 MtrunA17_Chr5g0401681 28.247 485 311 14 22 499 5 459 1.36e-58 202
Msa0459440 MtrunA17_Chr1g0174441 28.516 512 335 12 2 499 1 495 4.67e-58 202
Msa0459440 MtrunA17_Chr3g0094231 27.495 491 332 8 50 537 36 505 5.13e-58 201
Msa0459440 MtrunA17_Chr5g0405001 28.261 506 321 13 46 536 40 518 8.53e-58 201
Msa0459440 MtrunA17_Chr8g0356001 27.236 492 328 11 16 499 3 472 9.84e-58 200
Msa0459440 MtrunA17_Chr2g0304871 28.427 496 334 11 49 536 36 518 1.14e-57 201
Msa0459440 MtrunA17_Chr3g0101601 28.543 494 307 11 20 502 8 466 1.41e-57 199
Msa0459440 MtrunA17_Chr4g0035921 28.032 503 321 12 23 510 14 490 4.00e-57 199
Msa0459440 MtrunA17_Chr5g0445441 27.495 491 329 9 23 510 52 518 4.50e-57 199
Msa0459440 MtrunA17_Chr3g0101711 27.254 488 322 9 23 502 11 473 4.72e-57 198
Msa0459440 MtrunA17_Chr5g0403331 27.435 503 329 11 20 510 3 481 5.02e-57 198
Msa0459440 MtrunA17_Chr8g0372591 61.111 144 55 1 329 471 1 144 7.42e-57 186
Msa0459440 MtrunA17_Chr4g0058261 28.970 466 301 12 52 509 64 507 8.93e-57 198
Msa0459440 MtrunA17_Chr7g0235551 29.209 493 315 14 18 499 5 474 1.10e-56 197
Msa0459440 MtrunA17_Chr8g0372251 28.317 505 323 11 46 536 31 510 1.61e-56 197
Msa0459440 MtrunA17_Chr2g0314721 27.977 529 332 13 7 527 3 490 1.68e-56 197
Msa0459440 MtrunA17_Chr6g0466941 28.679 530 352 12 15 537 12 522 1.70e-56 197
Msa0459440 MtrunA17_Chr5g0395381 28.425 489 281 12 19 499 11 438 2.13e-56 196
Msa0459440 MtrunA17_Chr3g0101671 28.711 512 335 13 25 527 11 501 2.17e-56 197
Msa0459440 MtrunA17_Chr4g0058201 27.944 501 323 12 41 530 19 492 3.01e-56 196
Msa0459440 MtrunA17_Chr5g0430101 27.126 494 319 12 24 506 11 474 3.02e-56 196
Msa0459440 MtrunA17_Chr8g0362481 30.952 420 260 10 92 500 5 405 3.42e-56 194
Msa0459440 MtrunA17_Chr4g0058281 27.515 487 319 10 25 502 21 482 9.62e-56 195
Msa0459440 MtrunA17_Chr4g0047631 26.128 532 352 14 12 528 4 509 1.13e-55 195
Msa0459440 MtrunA17_Chr5g0446161 28.032 503 308 13 23 506 6 473 1.19e-55 194
Msa0459440 MtrunA17_Chr5g0430031 26.755 527 341 13 24 535 12 508 1.25e-55 195
Msa0459440 MtrunA17_Chr1g0174461 28.287 502 303 12 18 497 5 471 1.65e-55 194
Msa0459440 MtrunA17_Chr3g0101651 27.992 493 313 12 23 502 11 474 2.59e-55 194
Msa0459440 MtrunA17_Chr4g0046631 26.600 500 342 11 48 539 43 525 2.87e-55 194
Msa0459440 MtrunA17_Chr4g0008101 26.901 513 343 9 44 539 33 530 2.88e-55 194
Msa0459440 MtrunA17_Chr3g0084921 27.894 527 338 15 23 532 10 511 3.86e-55 193
Msa0459440 MtrunA17_Chr5g0431641 26.453 499 338 7 14 510 6 477 4.34e-55 193
Msa0459440 MtrunA17_Chr5g0445451 26.939 490 333 6 23 510 11 477 4.43e-55 193
Msa0459440 MtrunA17_Chr7g0224551 30.398 477 282 14 46 502 27 473 6.61e-55 193
Msa0459440 MtrunA17_Chr8g0355961 27.846 492 325 11 16 499 3 472 7.85e-55 192
Msa0459440 MtrunA17_Chr1g0176831 27.168 519 325 12 20 527 33 509 9.70e-55 192
Msa0459440 MtrunA17_Chr8g0390881 26.945 527 345 13 23 535 8 508 1.06e-54 192
Msa0459440 MtrunA17_Chr4g0047691 26.640 503 334 11 18 510 15 492 1.75e-54 192
Msa0459440 MtrunA17_Chr4g0047661 26.426 526 354 13 16 528 9 514 1.84e-54 192
Msa0459440 MtrunA17_Chr5g0401691 26.556 482 323 12 21 499 23 476 3.57e-54 191
Msa0459440 MtrunA17_Chr4g0047641 26.347 501 341 11 18 510 13 493 4.73e-54 191
Msa0459440 MtrunA17_Chr5g0446151 28.785 469 291 11 48 506 39 474 5.00e-54 190
Msa0459440 MtrunA17_Chr6g0451741 26.040 553 386 10 2 537 4 550 1.10e-53 190
Msa0459440 MtrunA17_Chr1g0174471 28.106 491 323 13 18 499 20 489 1.24e-53 190
Msa0459440 MtrunA17_Chr5g0445381 26.761 497 331 9 22 510 37 508 1.96e-53 189
Msa0459440 MtrunA17_Chr3g0101631 27.733 494 310 11 20 502 8 465 2.56e-53 188
Msa0459440 MtrunA17_Chr5g0431671 26.439 469 321 6 44 510 32 478 3.80e-53 188
Msa0459440 MtrunA17_Chr7g0224561 30.398 477 282 14 46 502 27 473 4.26e-53 188
Msa0459440 MtrunA17_Chr5g0431501 26.122 490 336 10 50 532 33 503 4.38e-53 187
Msa0459440 MtrunA17_Chr5g0431461 26.122 490 336 10 50 532 33 503 4.38e-53 187
Msa0459440 MtrunA17_Chr3g0101621 27.403 489 312 11 23 502 6 460 6.19e-53 187
Msa0459440 MtrunA17_Chr5g0430131 26.157 497 325 13 23 506 9 476 6.37e-53 187
Msa0459440 MtrunA17_Chr8g0362701 28.767 438 297 8 73 505 52 479 1.07e-52 187
Msa0459440 MtrunA17_Chr5g0430091 25.904 498 326 12 23 506 9 477 1.12e-52 187
Msa0459440 MtrunA17_Chr3g0101811 26.562 512 328 12 23 510 6 493 1.15e-52 187
Msa0459440 MtrunA17_Chr1g0160851 25.988 481 327 12 23 499 8 463 2.19e-52 186
Msa0459440 MtrunA17_Chr6g0472311 24.908 542 362 14 12 532 1 518 3.47e-52 186
Msa0459440 MtrunA17_Chr1g0174451 27.479 484 327 12 22 499 9 474 4.03e-52 185
Msa0459440 MtrunA17_Chr2g0314731 26.953 512 335 12 20 527 3 479 8.28e-52 184
Msa0459440 MtrunA17_Chr4g0052861 27.642 492 319 14 11 499 2 459 1.21e-51 184
Msa0459440 MtrunA17_Chr3g0101691 26.844 488 325 8 23 502 11 474 1.26e-51 184
Msa0459440 MtrunA17_Chr7g0246221 26.611 481 331 7 23 499 7 469 1.37e-51 184
Msa0459440 MtrunA17_Chr5g0445531 26.840 462 314 6 50 510 38 476 1.73e-51 183
Msa0459440 MtrunA17_Chr1g0205361 26.813 455 305 12 49 499 33 463 1.96e-51 183
Msa0459440 MtrunA17_Chr1g0213671 27.848 474 315 10 32 499 21 473 2.11e-51 183
Msa0459440 MtrunA17_Chr4g0011921 27.093 454 311 7 51 502 30 465 2.58e-51 182
Msa0459440 MtrunA17_Chr1g0174481 28.306 484 324 13 19 499 5 468 2.92e-51 183
Msa0459440 MtrunA17_Chr5g0430081 26.166 493 327 11 24 506 10 475 2.96e-51 183
Msa0459440 MtrunA17_Chr4g0052881 28.138 494 311 13 13 499 4 460 5.42e-51 182
Msa0459440 MtrunA17_Chr6g0458561 28.937 508 326 14 44 538 48 533 6.57e-51 182
Msa0459440 MtrunA17_Chr4g0030701 27.332 461 305 10 51 499 36 478 9.44e-51 182
Msa0459440 MtrunA17_Chr1g0197891 28.825 451 299 9 49 499 33 461 9.51e-51 181
Msa0459440 MtrunA17_Chr3g0101721 26.411 496 324 11 29 510 12 480 9.96e-51 181
Msa0459440 MtrunA17_Chr1g0205371 27.083 480 325 12 23 499 7 464 1.11e-50 181
Msa0459440 MtrunA17_Chr5g0403321 26.638 473 314 9 49 510 33 483 1.65e-50 181
Msa0459440 MtrunA17_Chr2g0296651 26.078 487 331 12 13 499 2 459 1.77e-50 181
Msa0459440 MtrunA17_Chr4g0030711 27.586 464 311 9 70 521 54 504 1.84e-50 181
Msa0459440 MtrunA17_Chr6g0451691 26.190 504 352 8 46 537 37 532 2.06e-50 181
Msa0459440 MtrunA17_Chr1g0162811 27.254 488 326 11 20 502 6 469 2.43e-50 180
Msa0459440 MtrunA17_Chr1g0197881 28.632 475 315 11 27 499 8 460 2.46e-50 180
Msa0459440 MtrunA17_Chr1g0197851 28.571 476 315 11 27 499 8 461 2.51e-50 180
Msa0459440 MtrunA17_Chr5g0445421 26.327 490 309 10 24 510 90 530 2.81e-50 181
Msa0459440 MtrunA17_Chr7g0258221 26.978 493 324 13 18 499 5 472 2.86e-50 180
Msa0459440 MtrunA17_Chr4g0039391 25.745 470 324 9 67 531 50 499 4.35e-50 179
Msa0459440 MtrunA17_Chr3g0101581 25.941 505 340 12 20 514 5 485 5.36e-50 179
Msa0459440 MtrunA17_Chr4g0058191 25.440 511 351 12 25 530 2 487 5.49e-50 179
Msa0459440 MtrunA17_Chr1g0162801 26.426 526 349 13 20 529 6 509 7.38e-50 179
Msa0459440 MtrunA17_Chr6g0463801 28.782 476 305 11 41 511 28 474 8.69e-50 179
Msa0459440 MtrunA17_Chr4g0011901 26.362 459 308 8 51 502 30 465 1.13e-49 178
Msa0459440 MtrunA17_Chr3g0101751 28.265 513 319 13 15 510 5 485 2.82e-49 177
Msa0459440 MtrunA17_Chr3g0101831 25.904 498 335 9 23 510 6 479 3.36e-49 177
Msa0459440 MtrunA17_Chr4g0020041 25.709 494 334 8 17 502 3 471 3.61e-49 177
Msa0459440 MtrunA17_Chr4g0039901 26.477 457 315 9 44 499 29 465 3.92e-49 177
Msa0459440 MtrunA17_Chr4g0024771 25.523 478 328 9 28 502 17 469 4.95e-49 177
Msa0459440 MtrunA17_Chr8g0339331 26.786 504 339 12 46 537 34 519 5.46e-49 177
Msa0459440 MtrunA17_Chr7g0265611 26.531 490 328 12 29 510 29 494 5.54e-49 177
Msa0459440 MtrunA17_Chr7g0218611 25.764 458 318 10 48 502 31 469 5.65e-49 176
Msa0459440 MtrunA17_Chr1g0198191 25.904 498 346 12 19 510 14 494 7.88e-49 176
Msa0459440 MtrunA17_Chr1g0197871 27.333 450 305 9 50 499 34 461 8.80e-49 176
Msa0459440 MtrunA17_Chr1g0207841 27.983 461 302 10 76 521 58 503 1.01e-48 176
Msa0459440 MtrunA17_Chr3g0101761 27.545 501 322 12 23 510 6 478 1.94e-48 175
Msa0459440 MtrunA17_Chr8g0377341 27.606 518 305 17 15 499 15 495 2.08e-48 176
Msa0459440 MtrunA17_Chr4g0052851 26.030 461 305 11 41 499 24 450 4.45e-48 174
Msa0459440 MtrunA17_Chr3g0101821 25.787 508 337 12 13 510 1 478 4.78e-48 174
Msa0459440 MtrunA17_Chr5g0431511 25.101 494 336 9 50 532 33 503 4.84e-48 174
Msa0459440 MtrunA17_Chr7g0218601 25.887 479 327 12 27 502 15 468 9.29e-48 173
Msa0459440 MtrunA17_Chr5g0432751 26.004 473 321 12 46 509 29 481 1.50e-47 172
Msa0459440 MtrunA17_Chr1g0200951 29.555 494 306 17 53 532 64 529 1.80e-47 173
Msa0459440 MtrunA17_Chr1g0156101 25.581 473 330 10 39 502 21 480 3.92e-47 172
Msa0459440 MtrunA17_Chr3g0101801 25.198 504 340 8 20 510 6 485 4.62e-47 171
Msa0459440 MtrunA17_Chr7g0246131 25.667 487 331 8 23 500 7 471 9.86e-47 170
Msa0459440 MtrunA17_Chr1g0164211 26.258 457 309 10 47 499 28 460 1.21e-46 170
Msa0459440 MtrunA17_Chr4g0011961 25.910 467 320 10 41 502 19 464 1.91e-46 169
Msa0459440 MtrunA17_Chr6g0451641 26.000 550 357 17 3 537 7 521 2.49e-46 169
Msa0459440 MtrunA17_Chr3g0101571 26.068 468 316 9 48 510 34 476 5.53e-46 168
Msa0459440 MtrunA17_Chr2g0280261 28.664 464 290 11 48 502 32 463 9.74e-46 167
Msa0459440 MtrunA17_Chr5g0419691 25.523 478 328 10 48 521 27 480 1.37e-45 167
Msa0459440 MtrunA17_Chr4g0074581 28.138 494 323 10 50 531 69 542 1.70e-45 167
Msa0459440 MtrunA17_Chr8g0372331 56.923 130 55 1 408 537 1 129 2.62e-45 155
Msa0459440 MtrunA17_Chr1g0167321 26.016 492 336 7 25 510 8 477 3.25e-45 166
Msa0459440 MtrunA17_Chr5g0406651 25.751 466 326 8 39 502 19 466 4.75e-45 166
Msa0459440 MtrunA17_Chr4g0076161 24.200 500 332 12 20 502 3 472 9.74e-45 165
Msa0459440 MtrunA17_Chr5g0419451 27.473 455 289 13 56 499 62 486 1.36e-44 165
Msa0459440 MtrunA17_Chr4g0011871 24.790 476 335 9 48 521 27 481 4.37e-44 163
Msa0459440 MtrunA17_Chr8g0357421 25.749 501 331 10 23 510 6 478 7.94e-44 162
Msa0459440 MtrunA17_Chr4g0011881 27.193 456 307 11 51 502 31 465 2.35e-43 161
Msa0459440 MtrunA17_Chr8g0346261 26.804 485 325 15 52 531 86 545 2.77e-43 162
Msa0459440 MtrunA17_Chr8g0357431 25.743 505 335 9 19 510 2 479 4.59e-43 160
Msa0459440 MtrunA17_Chr4g0011981 26.068 468 319 11 41 502 19 465 8.80e-43 159
Msa0459440 MtrunA17_Chr7g0246181 26.862 443 303 6 61 500 45 469 1.40e-42 159
Msa0459440 MtrunA17_Chr8g0351801 27.650 434 270 10 90 499 71 484 2.01e-42 159
Msa0459440 MtrunA17_Chr1g0156081 25.268 467 325 10 46 502 52 504 2.17e-42 159
Msa0459440 MtrunA17_Chr7g0246151 25.899 417 291 5 87 500 68 469 2.35e-42 158
Msa0459440 MtrunA17_Chr4g0046321 27.778 468 295 17 51 502 35 475 2.45e-42 159
Msa0459440 MtrunA17_Chr8g0371761 52.083 144 58 1 350 482 1 144 2.54e-42 148
Msa0459440 MtrunA17_Chr4g0046351 26.337 486 304 18 51 517 35 485 7.16e-42 157
Msa0459440 MtrunA17_Chr4g0046331 26.638 473 296 17 51 502 35 477 1.18e-41 157
Msa0459440 MtrunA17_Chr5g0430111 25.000 444 291 13 24 453 12 427 1.47e-41 154
Msa0459440 MtrunA17_Chr6g0463791 24.040 495 327 13 24 502 7 468 2.08e-41 155
Msa0459440 MtrunA17_Chr2g0296661 26.794 418 284 9 86 499 65 464 4.28e-41 155
Msa0459440 MtrunA17_Chr3g0101741 25.647 425 285 6 90 510 3 400 3.16e-40 151
Msa0459440 MtrunA17_Chr4g0017411 25.380 461 308 13 41 499 21 447 4.78e-40 151
Msa0459440 MtrunA17_Chr1g0210091 24.766 428 299 11 90 510 103 514 1.08e-39 151
Msa0459440 MtrunA17_Chr7g0246121 26.024 415 289 6 87 499 68 466 6.09e-39 149
Msa0459440 MtrunA17_Chr7g0258211 27.146 431 265 13 90 499 76 478 1.40e-37 145
Msa0459440 MtrunA17_Chr2g0310351 32.663 199 129 2 331 527 1 196 3.56e-36 133
Msa0459440 MtrunA17_Chr1g0160861 30.435 253 167 6 249 500 61 305 9.64e-35 134
Msa0459440 MtrunA17_Chr5g0430071 27.007 274 187 5 240 506 63 330 1.54e-34 134
Msa0459440 MtrunA17_Chr5g0431591 28.114 281 187 4 236 510 24 295 3.80e-34 131
Msa0459440 MtrunA17_Chr4g0046681 28.829 222 156 2 318 539 18 237 5.26e-34 129
Msa0459440 MtrunA17_Chr1g0156061 23.718 468 277 10 40 502 44 436 1.07e-33 133
Msa0459440 MtrunA17_Chr6g0451811 33.333 210 138 2 329 538 3 210 1.66e-33 126
Msa0459440 MtrunA17_Chr2g0280071 24.335 489 343 11 24 502 37 508 4.88e-33 134
Msa0459440 MtrunA17_Chr2g0314781 36.464 181 100 2 347 527 1 166 1.37e-32 122
Msa0459440 MtrunA17_Chr8g0364651 22.437 517 370 11 24 532 6 499 1.62e-32 130
Msa0459440 MtrunA17_Chr4g0058211 30.348 201 137 1 330 530 18 215 4.27e-32 123
Msa0459440 MtrunA17_Chr2g0280121 24.755 408 284 9 104 502 88 481 4.52e-32 129
Msa0459440 MtrunA17_Chr1g0174431 32.536 209 131 4 331 532 1 206 4.57e-31 120
Msa0459440 MtrunA17_Chr5g0409051 25.319 470 320 12 46 500 25 478 4.82e-31 126
Msa0459440 MtrunA17_Chr8g0390871 31.163 215 141 4 324 535 20 230 7.62e-31 120
Msa0459440 MtrunA17_Chr5g0402981 34.536 194 124 3 345 537 6 197 1.71e-30 117
Msa0459440 MtrunA17_Chr2g0280081 23.904 456 319 11 87 532 568 1005 5.19e-30 125
Msa0459440 MtrunA17_Chr2g0280081 24.413 426 295 10 87 502 67 475 1.11e-27 118
Msa0459440 MtrunA17_Chr6g0451681 29.339 242 168 3 297 537 242 481 1.50e-29 121
Msa0459440 MtrunA17_Chr6g0451681 28.814 177 107 6 4 175 23 185 1.52e-11 66.6
Msa0459440 MtrunA17_Chr5g0446101 33.333 213 131 5 294 502 77 282 3.05e-29 117
Msa0459440 MtrunA17_Chr4g0046661 29.167 216 151 2 324 539 18 231 5.11e-29 114
Msa0459440 MtrunA17_Chr6g0477081 34.184 196 108 3 249 441 64 241 1.22e-27 111
Msa0459440 MtrunA17_Chr6g0451771 30.918 207 141 2 331 537 22 226 1.80e-27 110
Msa0459440 MtrunA17_Chr8g0387101 23.318 446 315 10 97 532 79 507 5.93e-27 114
Msa0459440 MtrunA17_Chr4g0011851 27.979 193 132 2 329 521 14 199 2.90e-26 106
Msa0459440 MtrunA17_Chr5g0445761 33.721 172 111 1 331 502 1 169 6.21e-26 105
Msa0459440 MtrunA17_Chr4g0011941 29.070 172 119 1 331 502 1 169 2.83e-25 103
Msa0459440 MtrunA17_Chr5g0413911 21.474 475 335 13 47 499 39 497 6.14e-25 108
Msa0459440 MtrunA17_Chr2g0280011 30.337 178 118 2 330 502 7 183 1.06e-24 102
Msa0459440 MtrunA17_Chr3g0101591 31.937 191 118 4 333 514 34 221 1.60e-24 102
Msa0459440 MtrunA17_Chr2g0280061 32.222 180 112 4 330 502 7 183 2.56e-24 100
Msa0459440 MtrunA17_Chr4g0046701 31.977 172 105 3 373 539 1 165 1.62e-23 97.4
Msa0459440 MtrunA17_Chr5g0430151 30.667 150 100 2 362 510 6 152 1.74e-23 97.8
Msa0459440 MtrunA17_Chr5g0423621 32.680 153 98 2 347 499 1 148 6.54e-23 96.3
Msa0459440 MtrunA17_Chr2g0280041 22.222 432 297 11 87 502 99 507 1.92e-22 100
Msa0459440 MtrunA17_Chr5g0402971 25.524 286 195 7 51 329 41 315 6.39e-22 96.7
Msa0459440 MtrunA17_Chr6g0463621 28.324 173 122 2 331 502 1 172 1.62e-21 92.8
Msa0459440 MtrunA17_Chr5g0444981 33.742 163 104 2 337 499 17 175 1.78e-21 93.2
Msa0459440 MtrunA17_Chr5g0445351 33.803 142 91 1 359 500 52 190 2.55e-21 92.4
Msa0459440 MtrunA17_Chr5g0445371 26.556 241 141 4 272 510 1 207 2.80e-21 93.2
Msa0459440 MtrunA17_Chr7g0255131 23.044 473 322 16 22 478 11 457 4.15e-21 96.7
Msa0459440 MtrunA17_Chr3g0086681 37.008 127 79 1 374 499 8 134 4.30e-21 90.9
Msa0459440 MtrunA17_Chr5g0430041 29.801 151 102 2 357 506 1 148 6.21e-21 90.5
Msa0459440 MtrunA17_Chr5g0445751 26.074 326 207 9 11 329 7 305 4.02e-20 91.3
Msa0459440 MtrunA17_Chr3g0104351 29.614 233 140 7 259 478 245 466 1.73e-19 91.7
Msa0459440 MtrunA17_Chr4g0046691 24.335 263 179 5 51 312 40 283 1.21e-18 87.0
Msa0459440 MtrunA17_Chr4g0038271 23.503 451 291 17 57 478 85 510 3.31e-18 87.8
Msa0459440 MtrunA17_Chr3g0116731 35.965 114 66 1 382 495 1 107 6.22e-18 80.5
Msa0459440 MtrunA17_Chr4g0028321 36.752 117 69 3 397 510 20 134 6.28e-17 78.6
Msa0459440 MtrunA17_Chr1g0164321 25.781 256 167 6 239 478 249 497 8.59e-17 83.6
Msa0459440 MtrunA17_Chr8g0364631 23.125 480 324 12 50 510 32 485 1.44e-16 82.4
Msa0459440 MtrunA17_Chr3g0117301 30.508 118 79 1 382 499 1 115 2.86e-16 75.1
Msa0459440 MtrunA17_Chr1g0174421 24.262 305 215 9 23 326 22 311 3.18e-16 80.1
Msa0459440 MtrunA17_Chr4g0011861 23.488 281 199 7 48 326 27 293 8.57e-16 78.6
Msa0459440 MtrunA17_Chr3g0101541 31.405 121 80 1 379 499 1 118 9.58e-16 74.3
Msa0459440 MtrunA17_Chr8g0348751 22.757 457 297 17 53 478 29 460 9.81e-16 80.1
Msa0459440 MtrunA17_Chr6g0449381 25.792 221 157 3 263 478 237 455 1.06e-15 79.7
Msa0459440 MtrunA17_Chr5g0445361 34.579 107 67 1 404 510 11 114 1.39e-15 73.9
Msa0459440 MtrunA17_Chr0c19g0493771 22.518 413 279 16 100 499 234 618 1.63e-15 79.7
Msa0459440 MtrunA17_Chr8g0387001 23.368 475 313 18 30 478 6 455 2.36e-15 79.0
Msa0459440 MtrunA17_Chr4g0030741 24.042 287 189 8 76 354 84 349 3.52e-15 77.0
Msa0459440 MtrunA17_Chr4g0011931 23.793 290 201 7 25 311 4 276 6.06e-15 75.9
Msa0459440 MtrunA17_Chr4g0076171 27.044 159 92 2 347 502 1 138 9.88e-15 72.4
Msa0459440 MtrunA17_Chr6g0463611 22.468 316 203 11 23 326 21 306 1.65e-14 74.7
Msa0459440 MtrunA17_Chr6g0449331 24.096 249 173 5 263 497 238 484 1.86e-14 75.9
Msa0459440 MtrunA17_Chr5g0445411 27.841 176 118 3 6 177 1 171 3.50e-14 70.9
Msa0459440 MtrunA17_Chr3g0141801 20.202 495 342 16 24 509 15 465 3.72e-14 75.1
Msa0459440 MtrunA17_Chr7g0225531 24.473 237 169 5 263 497 252 480 3.73e-14 75.1
Msa0459440 MtrunA17_Chr1g0183611 25.514 243 172 5 263 498 155 395 5.82e-14 73.9
Msa0459440 MtrunA17_Chr6g0449341 23.704 270 186 7 242 497 269 532 6.35e-14 74.3
Msa0459440 MtrunA17_Chr5g0403931 23.077 494 302 20 26 499 17 452 2.93e-13 72.0
Msa0459440 MtrunA17_Chr4g0046671 21.402 271 194 5 51 315 45 302 5.26e-13 70.1
Msa0459440 MtrunA17_Chr1g0163421 23.868 243 175 7 263 498 271 510 6.27e-13 71.2
Msa0459440 MtrunA17_Chr1g0163451 23.967 242 176 5 263 498 255 494 7.24e-13 70.9
Msa0459440 MtrunA17_Chr5g0431631 27.972 143 102 1 19 161 19 160 8.75e-13 66.6
Msa0459440 MtrunA17_Chr3g0107501 23.774 265 180 9 243 500 201 450 2.16e-12 69.3
Msa0459440 MtrunA17_Chr2g0293421 25.446 224 143 7 280 497 249 454 3.01e-12 68.9
Msa0459440 MtrunA17_Chr5g0396521 21.053 285 179 7 264 511 277 552 3.58e-12 68.9
Msa0459440 MtrunA17_Chr5g0430171 25.207 242 151 9 23 257 9 227 4.18e-12 66.2
Msa0459440 MtrunA17_Chr1g0176851 25.301 249 167 7 140 385 2 234 4.51e-12 66.2
Msa0459440 MtrunA17_Chr4g0056981 40.845 71 42 0 357 427 1 71 9.03e-12 60.8
Msa0459440 MtrunA17_Chr8g0339861 24.460 278 180 10 207 478 184 437 1.37e-11 67.0
Msa0459440 MtrunA17_Chr1g0163461 24.380 242 175 5 263 498 250 489 1.68e-11 66.6
Msa0459440 MtrunA17_Chr6g0449351 23.182 220 162 4 263 478 197 413 1.75e-11 66.6
Msa0459440 MtrunA17_Chr5g0400421 23.256 301 193 9 207 497 188 460 3.31e-11 65.9
Msa0459440 MtrunA17_Chr1g0184461 21.856 485 339 17 23 496 11 466 4.79e-11 65.1
Msa0459440 MtrunA17_Chr3g0119681 21.961 255 167 8 263 497 244 486 6.51e-11 64.7
Msa0459440 MtrunA17_Chr3g0089351 27.386 241 152 9 275 510 157 379 7.93e-11 63.9
Msa0459440 MtrunA17_Chr7g0260831 21.519 237 168 8 263 496 243 464 9.64e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0459440 AT4G39950.1 51.803 527 241 7 17 537 18 537 0.0 565
Msa0459440 AT4G39950.2 51.803 527 241 7 17 537 58 577 0.0 565
Msa0459440 AT2G22330.2 51.504 532 244 7 7 537 44 562 0.0 562
Msa0459440 AT2G22330.1 51.504 532 244 7 7 537 21 539 0.0 561
Msa0459440 AT5G05260.2 52.439 492 226 6 50 537 40 527 0.0 544
Msa0459440 AT5G05260.1 50.000 492 206 6 50 537 40 495 1.39e-174 502
Msa0459440 AT1G58260.1 46.449 521 267 6 24 537 10 525 8.14e-166 481
Msa0459440 AT5G35917.1 46.964 494 209 9 50 537 42 488 2.15e-157 458
Msa0459440 AT1G79370.1 44.592 527 275 5 24 537 16 538 1.21e-154 453
Msa0459440 AT1G16410.1 39.205 528 302 9 22 537 13 533 8.49e-131 392
Msa0459440 AT1G16400.1 38.361 537 311 9 15 537 2 532 7.35e-128 384
Msa0459440 AT1G16410.2 37.010 408 241 7 22 419 13 414 3.11e-90 283
Msa0459440 AT1G01280.1 34.879 453 278 8 90 537 69 509 2.12e-86 276
Msa0459440 AT5G07990.1 32.386 528 321 12 23 537 4 508 6.87e-74 244
Msa0459440 AT4G12320.1 30.695 518 326 11 23 533 21 512 6.40e-67 225
Msa0459440 AT4G12300.1 30.059 509 324 10 33 533 26 510 3.29e-66 223
Msa0459440 AT4G22710.1 29.228 479 314 8 59 533 62 519 8.01e-62 212
Msa0459440 AT4G22690.1 29.202 476 318 7 59 533 93 550 8.39e-62 213
Msa0459440 AT2G40890.1 28.405 514 338 10 30 539 16 503 2.37e-61 210
Msa0459440 AT2G23190.1 27.519 516 334 14 24 531 49 532 3.01e-60 208
Msa0459440 AT4G37430.1 26.590 519 335 15 23 531 10 492 1.99e-59 205
Msa0459440 AT4G37320.1 29.046 482 306 13 24 499 6 457 1.71e-57 199
Msa0459440 AT4G37340.1 27.553 519 332 15 20 531 8 489 2.57e-57 199
Msa0459440 AT5G06900.1 29.933 451 290 11 50 497 34 461 4.88e-57 199
Msa0459440 AT4G31940.1 28.947 456 312 9 52 498 33 485 5.51e-57 199
Msa0459440 AT5G36220.1 27.788 529 327 15 15 531 9 494 1.15e-56 197
Msa0459440 AT5G44620.1 27.941 476 325 7 59 533 55 513 1.22e-56 198
Msa0459440 AT4G31970.1 28.166 458 312 8 52 498 33 484 1.09e-55 196
Msa0459440 AT4G37370.1 28.243 478 312 12 26 499 6 456 2.42e-55 194
Msa0459440 AT3G61880.1 29.940 501 315 16 40 531 56 529 6.54e-55 194
Msa0459440 AT3G28740.1 29.870 462 287 14 45 499 34 465 6.90e-55 193
Msa0459440 AT2G23220.1 27.273 506 325 15 36 531 32 504 8.27e-55 193
Msa0459440 AT2G45550.1 27.200 500 335 13 18 510 7 484 1.07e-54 192
Msa0459440 AT4G12310.1 28.484 488 310 11 59 533 53 514 1.87e-54 192
Msa0459440 AT3G61880.2 29.940 501 315 16 40 531 56 529 1.90e-54 193
Msa0459440 AT5G04330.1 27.745 501 315 12 51 532 33 505 2.43e-54 192
Msa0459440 AT2G25160.1 29.545 528 344 13 23 537 6 518 2.52e-54 192
Msa0459440 AT5G57220.1 26.761 497 316 13 6 499 1 452 4.88e-54 190
Msa0459440 AT5G10610.1 25.984 508 347 11 27 530 7 489 1.11e-52 187
Msa0459440 AT5G67310.1 25.726 482 322 10 23 499 18 468 1.25e-52 187
Msa0459440 AT2G45560.1 25.904 498 344 11 18 510 7 484 1.39e-52 187
Msa0459440 AT3G25180.1 27.715 534 345 13 16 537 8 512 6.21e-52 185
Msa0459440 AT4G36220.1 26.105 475 301 8 57 510 47 492 6.48e-52 185
Msa0459440 AT4G37330.1 28.367 490 294 16 26 499 6 454 6.49e-52 184
Msa0459440 AT4G37360.1 27.292 480 320 12 23 499 4 457 6.94e-52 184
Msa0459440 AT4G37410.1 25.364 481 328 13 24 499 4 458 1.00e-51 184
Msa0459440 AT3G26830.1 26.626 492 335 10 27 511 3 475 1.33e-51 184
Msa0459440 AT1G33720.1 25.826 484 339 10 48 527 36 503 1.63e-51 184
Msa0459440 AT3G20140.1 28.689 488 296 17 41 509 29 483 1.79e-51 184
Msa0459440 AT1G13090.2 27.443 481 307 11 45 511 23 475 5.34e-51 182
Msa0459440 AT2G14100.1 28.205 429 285 9 77 499 65 476 6.77e-51 182
Msa0459440 AT2G45570.1 26.932 427 296 6 87 510 72 485 9.29e-51 182
Msa0459440 AT5G04630.1 25.825 515 364 6 20 532 11 509 1.10e-50 182
Msa0459440 AT4G37310.1 25.096 522 363 14 24 536 4 506 1.91e-50 181
Msa0459440 AT3G10560.1 25.981 535 363 13 6 532 4 513 2.92e-50 181
Msa0459440 AT3G48280.1 26.448 518 339 12 23 533 8 490 2.97e-50 180
Msa0459440 AT1G13110.1 26.305 498 316 13 24 502 7 472 6.71e-50 179
Msa0459440 AT3G48310.1 26.609 466 298 11 46 502 28 458 7.65e-50 179
Msa0459440 AT5G35715.1 27.594 424 275 9 90 502 3 405 1.06e-49 177
Msa0459440 AT4G31950.1 27.135 527 345 12 27 537 8 511 3.87e-49 177
Msa0459440 AT1G74540.1 27.016 496 322 14 24 510 1 465 5.80e-49 177
Msa0459440 AT5G04660.1 27.171 449 310 5 87 532 78 512 6.17e-49 177
Msa0459440 AT4G13770.1 26.283 487 318 12 25 502 14 468 6.62e-49 177
Msa0459440 AT4G31500.1 26.087 460 320 8 46 502 25 467 7.08e-49 176
Msa0459440 AT3G61040.1 27.887 459 303 11 45 499 28 462 7.85e-49 176
Msa0459440 AT4G15360.1 28.024 496 313 14 18 499 9 474 1.44e-48 176
Msa0459440 AT4G12330.1 28.364 483 313 12 59 533 55 512 1.47e-48 176
Msa0459440 AT5G25120.1 26.501 483 317 14 27 502 11 462 2.33e-48 175
Msa0459440 AT3G52970.1 26.587 504 328 15 15 500 1 480 2.96e-48 175
Msa0459440 AT3G44250.1 27.975 479 302 12 45 509 23 472 3.34e-48 174
Msa0459440 AT5G10600.1 25.200 500 336 11 38 530 37 505 4.35e-48 175
Msa0459440 AT1G13100.1 27.045 440 283 12 87 511 59 475 5.10e-48 174
Msa0459440 AT3G26170.1 26.653 499 325 15 16 502 1 470 7.70e-48 174
Msa0459440 AT3G48270.1 27.273 462 294 13 46 499 27 454 1.81e-47 172
Msa0459440 AT3G26150.1 26.693 502 321 16 16 502 1 470 1.99e-47 172
Msa0459440 AT3G52970.2 26.667 510 334 15 15 500 1 494 2.18e-47 173
Msa0459440 AT1G13080.1 27.066 484 330 11 25 502 4 470 2.34e-47 172
Msa0459440 AT3G48300.1 26.566 463 302 12 52 508 31 461 3.20e-47 172
Msa0459440 AT3G48300.2 26.566 463 302 12 52 508 33 463 3.32e-47 172
Msa0459440 AT3G32047.1 26.450 431 289 8 77 499 64 474 4.00e-47 172
Msa0459440 AT3G20090.2 27.490 502 320 12 15 499 4 478 4.24e-47 172
Msa0459440 AT5G25140.1 25.971 489 321 13 24 502 5 462 4.49e-47 171
Msa0459440 AT4G15330.1 25.926 513 341 13 25 530 14 494 6.31e-47 171
Msa0459440 AT3G53300.1 27.140 479 302 14 45 506 23 471 7.79e-47 171
Msa0459440 AT1G74550.1 26.154 520 342 13 24 537 3 486 1.26e-46 170
Msa0459440 AT3G20130.1 28.341 434 280 10 77 499 64 477 1.63e-46 170
Msa0459440 AT1G01190.2 27.933 537 317 23 7 508 17 518 2.36e-46 170
Msa0459440 AT1G01190.1 27.933 537 317 23 7 508 12 513 2.61e-46 170
Msa0459440 AT4G37400.1 25.370 473 316 12 67 531 46 489 2.79e-46 169
Msa0459440 AT3G26160.1 25.189 528 350 14 16 532 1 494 2.84e-46 169
Msa0459440 AT3G53280.1 26.866 469 306 11 45 502 23 465 2.84e-46 169
Msa0459440 AT3G48290.1 26.638 473 303 14 46 509 29 466 4.14e-46 169
Msa0459440 AT3G26280.1 24.699 498 329 14 27 510 15 480 7.12e-46 168
Msa0459440 AT1G11610.1 25.918 490 327 14 46 526 29 491 7.72e-46 168
Msa0459440 AT5G25180.1 26.186 485 314 14 28 502 12 462 7.74e-46 168
Msa0459440 AT3G26280.2 24.699 498 329 14 27 510 32 497 8.32e-46 169
Msa0459440 AT2G46660.1 28.723 470 302 16 46 510 66 507 2.15e-45 167
Msa0459440 AT5G57260.1 26.261 476 304 13 48 506 28 473 2.21e-45 167
Msa0459440 AT3G26210.1 27.103 428 271 11 90 502 68 469 3.74e-45 166
Msa0459440 AT2G27000.1 27.586 435 287 12 75 499 59 475 1.17e-44 165
Msa0459440 AT1G74110.1 26.604 530 351 18 3 512 9 520 1.18e-44 166
Msa0459440 AT3G26330.1 25.431 464 305 12 51 502 32 466 1.41e-44 165
Msa0459440 AT3G26320.1 25.647 464 304 11 51 502 32 466 1.58e-44 164
Msa0459440 AT1G11610.2 25.780 481 321 14 46 517 29 482 1.77e-44 164
Msa0459440 AT2G24180.1 27.176 471 305 14 50 509 36 479 2.03e-44 164
Msa0459440 AT3G26180.1 26.237 465 313 12 47 502 27 470 2.03e-44 164
Msa0459440 AT5G06905.1 26.346 520 333 18 27 522 9 502 3.09e-44 164
Msa0459440 AT3G26300.1 25.431 464 309 12 49 502 30 466 3.63e-44 164
Msa0459440 AT3G26310.1 25.761 493 324 12 22 502 3 465 4.61e-44 163
Msa0459440 AT1G33720.4 26.893 383 264 7 148 527 2 371 5.70e-44 160
Msa0459440 AT1G33720.3 26.893 383 264 7 148 527 2 371 5.70e-44 160
Msa0459440 AT1G33720.5 26.893 383 264 7 148 527 2 371 5.70e-44 160
Msa0459440 AT1G66540.1 27.824 363 238 8 139 499 4 344 8.48e-44 160
Msa0459440 AT3G26190.1 24.516 465 324 10 45 502 23 467 1.79e-43 162
Msa0459440 AT1G50520.1 26.305 498 332 15 16 499 4 480 1.83e-43 162
Msa0459440 AT3G10570.1 25.893 448 316 5 87 532 80 513 3.27e-43 161
Msa0459440 AT3G20120.4 27.397 438 281 12 77 500 63 477 5.64e-43 160
Msa0459440 AT3G20950.1 26.587 504 325 17 15 499 4 481 5.90e-43 160
Msa0459440 AT4G13310.1 25.054 459 316 11 46 499 28 463 9.85e-43 159
Msa0459440 AT3G20940.1 25.630 476 311 14 41 499 29 478 1.00e-42 160
Msa0459440 AT3G20080.2 26.526 475 308 13 41 499 29 478 1.52e-42 159
Msa0459440 AT3G20080.1 26.526 475 308 13 41 499 29 478 1.52e-42 159
Msa0459440 AT3G48320.1 25.257 487 321 13 25 505 12 461 5.04e-42 157
Msa0459440 AT3G26270.1 25.646 503 333 14 47 538 29 501 7.12e-42 157
Msa0459440 AT4G13290.1 25.055 455 305 12 50 499 33 456 1.01e-41 157
Msa0459440 AT5G35920.1 48.649 148 74 2 390 537 8 153 1.28e-41 147
Msa0459440 AT3G26290.1 26.327 471 308 11 43 502 24 466 2.07e-41 156
Msa0459440 AT3G26290.2 26.327 471 308 11 43 502 37 479 2.50e-41 156
Msa0459440 AT4G15350.1 26.147 436 288 10 77 499 57 471 3.02e-41 155
Msa0459440 AT3G48290.2 25.251 499 303 15 46 509 29 492 3.12e-41 155
Msa0459440 AT2G42250.1 25.720 486 322 13 29 499 18 479 6.00e-41 155
Msa0459440 AT1G33730.1 27.200 375 257 7 155 526 5 366 8.28e-41 151
Msa0459440 AT1G33730.2 27.200 375 257 7 155 526 5 366 8.28e-41 151
Msa0459440 AT3G26230.1 25.200 500 334 14 23 510 5 476 1.55e-40 153
Msa0459440 AT5G42590.1 26.070 514 341 17 23 525 6 491 1.96e-40 153
Msa0459440 AT5G47990.1 27.553 421 271 11 90 499 80 477 2.02e-40 153
Msa0459440 AT3G20110.1 25.800 500 318 15 17 500 6 468 2.28e-40 153
Msa0459440 AT3G20100.1 26.018 442 289 12 73 499 59 477 3.24e-40 153
Msa0459440 AT3G20960.2 27.512 418 275 9 90 499 79 476 3.29e-40 153
Msa0459440 AT1G28430.1 25.408 429 301 8 76 499 61 475 4.04e-40 152
Msa0459440 AT2G45580.1 25.962 416 292 6 87 499 72 474 4.06e-40 152
Msa0459440 AT2G30750.1 25.562 489 328 13 47 526 30 491 4.45e-40 152
Msa0459440 AT5G36220.2 30.330 333 197 10 205 531 45 348 4.63e-40 149
Msa0459440 AT3G26200.1 24.464 466 325 10 44 502 22 467 6.65e-40 152
Msa0459440 AT4G15330.2 24.706 510 323 13 25 530 14 466 8.59e-40 151
Msa0459440 AT2G30770.1 24.335 489 334 12 47 526 30 491 1.29e-39 151
Msa0459440 AT5G25130.1 25.104 482 325 12 27 502 11 462 2.70e-39 150
Msa0459440 AT5G42580.1 24.940 417 275 8 90 499 77 462 8.85e-39 149
Msa0459440 AT1G33720.2 25.553 407 264 8 148 527 2 396 1.66e-38 146
Msa0459440 AT3G20090.1 29.282 362 224 11 148 499 1 340 5.32e-38 144
Msa0459440 AT1G66540.2 30.034 293 181 8 209 499 15 285 6.58e-38 142
Msa0459440 AT1G50560.1 27.465 426 268 14 90 499 81 481 6.74e-38 146
Msa0459440 AT4G15380.1 24.402 418 290 6 87 499 77 473 1.06e-37 146
Msa0459440 AT2G30490.1 24.480 433 299 10 86 509 67 480 1.36e-37 145
Msa0459440 AT3G20130.2 26.608 451 273 11 57 499 49 449 2.51e-37 144
Msa0459440 AT1G13710.1 26.484 438 287 13 103 531 101 512 2.98e-37 144
Msa0459440 AT2G45580.2 31.890 254 165 4 249 499 72 320 1.22e-36 140
Msa0459440 AT1G11600.1 23.752 501 342 9 23 505 6 484 1.80e-36 142
Msa0459440 AT2G02580.1 25.000 492 325 13 26 502 4 466 3.85e-36 141
Msa0459440 AT3G20120.2 28.297 364 227 11 148 500 1 341 6.41e-36 138
Msa0459440 AT3G20120.3 28.297 364 227 11 148 500 1 341 6.41e-36 138
Msa0459440 AT3G20120.1 28.297 364 227 11 148 500 1 341 6.41e-36 138
Msa0459440 AT3G26220.1 24.748 497 342 13 25 510 4 479 1.85e-35 139
Msa0459440 AT3G20960.1 28.022 364 244 8 139 499 25 373 1.96e-35 137
Msa0459440 AT5G09970.1 27.706 462 294 18 52 500 71 505 8.67e-35 138
Msa0459440 AT1G64940.1 24.502 502 333 14 50 531 33 508 4.50e-34 135
Msa0459440 AT5G24950.1 23.094 459 322 11 47 499 29 462 6.99e-34 134
Msa0459440 AT2G25160.2 29.275 386 249 9 23 397 6 378 1.55e-33 132
Msa0459440 AT5G24960.1 24.783 460 313 12 47 499 30 463 1.49e-32 130
Msa0459440 AT2G05180.1 26.044 407 250 13 77 461 63 440 1.63e-32 130
Msa0459440 AT3G20935.1 34.302 172 110 2 330 499 133 303 1.22e-30 122
Msa0459440 AT3G20080.4 27.322 366 227 12 148 499 1 341 1.92e-30 123
Msa0459440 AT3G20080.5 27.322 366 227 12 148 499 1 341 1.92e-30 123
Msa0459440 AT3G20080.6 27.322 366 227 12 148 499 1 341 1.92e-30 123
Msa0459440 AT3G20080.3 27.322 366 227 12 148 499 1 341 1.92e-30 123
Msa0459440 AT2G27010.1 28.253 269 172 6 269 530 222 476 1.98e-30 124
Msa0459440 AT3G61040.2 26.042 384 259 10 45 424 28 390 2.66e-30 122
Msa0459440 AT1G64930.1 22.000 500 349 14 50 531 32 508 5.12e-30 124
Msa0459440 AT3G25180.2 26.546 388 260 9 16 397 8 376 1.27e-29 120
Msa0459440 AT1G64950.1 24.652 503 331 17 50 531 32 507 2.21e-29 122
Msa0459440 AT1G13080.2 25.356 351 242 9 157 502 17 352 8.09e-29 118
Msa0459440 AT4G20240.1 23.284 408 287 11 47 450 30 415 9.54e-29 119
Msa0459440 AT2G12190.1 23.567 471 315 13 50 499 32 478 4.33e-28 118
Msa0459440 AT3G03470.1 22.245 490 349 11 23 499 7 477 1.21e-26 114
Msa0459440 AT4G13310.2 23.483 379 266 9 50 424 32 390 1.32e-26 112
Msa0459440 AT1G58265.1 49.000 100 44 2 417 511 8 105 1.54e-26 105
Msa0459440 AT3G26180.2 30.288 208 138 4 299 502 132 336 1.57e-25 108
Msa0459440 AT5G25900.1 21.443 485 344 14 57 531 50 507 3.28e-24 106
Msa0459440 AT3G53290.1 25.558 403 255 11 106 502 11 374 2.57e-23 102
Msa0459440 AT3G56630.1 22.766 470 333 14 53 511 30 480 1.49e-22 101
Msa0459440 AT4G20240.2 22.715 383 267 12 47 424 30 388 5.98e-22 98.6
Msa0459440 AT2G45580.3 23.324 343 250 5 87 426 72 404 2.10e-21 97.1
Msa0459440 AT5G61320.1 23.460 422 281 11 87 499 68 456 6.80e-21 96.3
Msa0459440 AT1G34540.1 21.875 480 351 13 26 497 3 466 3.13e-20 94.4
Msa0459440 AT1G64900.1 22.247 454 326 11 87 531 68 503 3.90e-20 94.0
Msa0459440 AT4G39490.1 22.176 478 325 16 26 478 11 466 1.16e-18 89.7
Msa0459440 AT1G13090.1 28.114 281 168 8 45 316 23 278 6.88e-17 82.0
Msa0459440 AT5G24960.2 22.857 385 268 10 47 425 30 391 8.72e-17 82.8
Msa0459440 AT5G58860.1 22.687 454 296 13 53 478 32 458 1.09e-16 83.6
Msa0459440 AT1G57750.1 25.000 240 169 4 263 499 236 467 7.56e-16 80.9
Msa0459440 AT5G23190.1 25.984 254 164 10 239 478 247 490 1.25e-15 80.1
Msa0459440 AT5G63450.2 26.667 240 161 6 263 497 300 529 2.62e-15 79.3
Msa0459440 AT5G63450.1 26.556 241 162 6 263 498 242 472 2.97e-15 79.0
Msa0459440 AT1G65340.1 21.586 454 297 17 54 478 30 453 3.86e-15 78.6
Msa0459440 AT1G19630.1 25.909 220 143 5 301 514 256 461 5.00e-15 78.2
Msa0459440 AT4G00360.1 20.675 474 333 15 30 478 6 461 5.23e-15 78.2
Msa0459440 AT4G39500.2 23.554 242 176 4 263 497 246 485 3.64e-14 75.5
Msa0459440 AT4G39500.1 23.554 242 176 4 263 497 196 435 6.39e-14 74.7
Msa0459440 AT3G48520.1 25.105 239 165 7 263 497 240 468 7.12e-14 74.7
Msa0459440 AT4G39510.1 21.598 463 320 17 57 498 35 475 9.75e-14 74.3
Msa0459440 AT3G53130.1 25.000 192 134 4 319 506 332 517 2.41e-13 73.2
Msa0459440 AT1G19630.3 25.366 205 133 5 301 499 256 446 3.12e-13 72.4
Msa0459440 AT3G53305.1 32.331 133 81 2 377 509 183 306 5.71e-13 70.9
Msa0459440 AT1G73340.1 20.892 493 334 17 15 500 11 454 1.20e-12 70.5
Msa0459440 AT2G44890.1 24.567 289 188 11 263 534 236 511 2.73e-12 69.7
Msa0459440 AT2G26170.1 27.320 194 129 6 291 478 282 469 7.93e-12 68.2
Msa0459440 AT2G26170.2 27.320 194 129 6 291 478 199 386 1.28e-11 67.4
Msa0459440 AT5G38970.2 24.000 225 152 7 280 499 147 357 1.48e-11 66.6
Msa0459440 AT5G38970.4 24.000 225 152 7 280 499 147 357 1.48e-11 66.6
Msa0459440 AT4G15110.1 20.702 285 180 7 264 511 285 560 1.86e-11 67.0
Msa0459440 AT5G05690.3 26.368 201 135 4 302 499 132 322 2.10e-11 65.9
Msa0459440 AT2G45510.1 21.538 260 182 7 263 508 236 487 4.21e-11 65.9
Msa0459440 AT5G05690.1 26.368 201 135 4 302 499 251 441 4.22e-11 65.9
Msa0459440 AT1G47620.1 22.449 245 176 6 263 497 244 484 4.24e-11 65.9
Msa0459440 AT1G57750.2 25.128 195 137 3 263 454 236 424 4.94e-11 65.5
Msa0459440 AT2G23180.1 23.077 247 176 6 263 497 237 481 6.36e-11 65.5

Find 129 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGACGATGTTTAGTTAATA+AGG 0.159943 3_3:-55952969 Msa0459440:three_prime_UTR
GGTTTATTTGCAAGCATTTC+AGG 0.188028 3_3:+55954573 None:intergenic
TGAGGTTCATTCCAAACTTT+TGG 0.227944 3_3:+55953329 None:intergenic
CTCAACAAAGTGGTATCTTA+TGG 0.251490 3_3:+55954656 None:intergenic
AAATATTTGAAAATTTAATA+AGG 0.254976 3_3:-55953012 Msa0459440:three_prime_UTR
GCATCAGCTGTTACACCCTT+TGG 0.271072 3_3:-55954360 Msa0459440:CDS
ATTTCCTCTGATGTCAATAA+TGG 0.283147 3_3:+55953814 None:intergenic
TATCATCAGCAAAGGTTTCT+TGG 0.295206 3_3:-55954382 Msa0459440:CDS
CATCAGCTGTTACACCCTTT+GGG 0.297203 3_3:-55954359 Msa0459440:CDS
AAAAGTACATGGCTACCTTT+TGG 0.320315 3_3:+55953377 None:intergenic
ACAATGACTGTGATGTTATT+AGG 0.321555 3_3:-55953182 Msa0459440:CDS
TTATGTATCCACCTAGTTGC+AGG 0.321764 3_3:+55954552 None:intergenic
TTGTAATTTGATGAGGAAAT+TGG 0.325728 3_3:-55954154 Msa0459440:CDS
GGAAAATGAATCAGTAAAAC+TGG 0.352612 3_3:-55952947 Msa0459440:three_prime_UTR
TCAACGAGCCACTGAGGAAT+TGG 0.353939 3_3:-55953561 Msa0459440:CDS
CAAGCTATGAGCTACACTTC+TGG 0.360708 3_3:-55954753 Msa0459440:CDS
TATAATTCTGCTGCCAATCT+TGG 0.368485 3_3:+55953044 None:intergenic
TTTGGGACCGGGTGGTAGTT+TGG 0.372123 3_3:+55954620 None:intergenic
GGTTGCTCCATGGCTTCAAT+TGG 0.373361 3_3:-55953157 Msa0459440:CDS
GTGGTTCCAAGCACAATTCC+AGG 0.380377 3_3:+55953203 None:intergenic
TTGAGAGGACTTGACTTTGA+TGG 0.381481 3_3:-55953997 Msa0459440:CDS
TCGGACGAAATCCAAAAGTT+TGG 0.392283 3_3:-55953340 Msa0459440:CDS
GCAATGGTGGGACAGGTAAC+AGG 0.392862 3_3:+55954468 None:intergenic
GTTTGTTGTTTCCATCTTTG+AGG 0.394363 3_3:+55953836 None:intergenic
TGACGATGTTTAGTTAATAA+GGG 0.396994 3_3:-55952968 Msa0459440:three_prime_UTR
GTGTTCTAAAGTTTAGTAAT+GGG 0.402342 3_3:-55952888 Msa0459440:three_prime_UTR
GAATGATGGTGGTCCTGGTT+TGG 0.404766 3_3:-55954100 Msa0459440:CDS
CATTCTTTCTCAAGAATTCA+AGG 0.405169 3_3:+55954445 None:intergenic
CTTGTTTGCTTAAAAGTACA+TGG 0.412322 3_3:+55953366 None:intergenic
ATAATGGTCTTGTGAATGTT+AGG 0.412396 3_3:-55954197 Msa0459440:CDS
AATGATATGAACTTCAAATC+TGG 0.414952 3_3:+55953248 None:intergenic
ACCAACTATAGGCCATGGTT+TGG 0.419820 3_3:+55954602 None:intergenic
ATATCAGTGGACATGGATAT+TGG 0.427913 3_3:+55954402 None:intergenic
GAACTTCTCAAGTATTTCAA+TGG 0.429663 3_3:-55953107 Msa0459440:CDS
ATCAAAGACTATTGCTGATT+CGG 0.432858 3_3:-55953884 Msa0459440:CDS
GTGGCTCGTTGAAGTAAATC+TGG 0.435855 3_3:+55953572 None:intergenic
AGTGTTCTAAAGTTTAGTAA+TGG 0.436117 3_3:-55952889 Msa0459440:three_prime_UTR
TCAGGAATATTACCAACTAT+AGG 0.437997 3_3:+55954591 None:intergenic
ACTAAACATCGTCATATAAG+AGG 0.439427 3_3:+55952977 None:intergenic
GAAATACTTGAGAAGTTCAA+TGG 0.440008 3_3:+55953112 None:intergenic
TCTCCCCTCACAGGCATCAA+TGG 0.445819 3_3:-55954293 Msa0459440:CDS
CCAACTATAGGCCATGGTTT+GGG 0.447196 3_3:+55954603 None:intergenic
GAAGTTCATATCATTTAGTA+CGG 0.448426 3_3:-55953240 Msa0459440:CDS
AGTTCAATGGATGATGCATT+AGG 0.452719 3_3:+55953125 None:intergenic
TTCAAGGGCAATGGTGGGAC+AGG 0.456375 3_3:+55954461 None:intergenic
ACGGGAAGGCGTGGTTGCCC+TGG 0.460150 3_3:-55953221 Msa0459440:CDS
GGCAATAGCAAAGCCAAGAT+TGG 0.469898 3_3:-55953057 Msa0459440:CDS
GGAAGGAATGATGGTGGTCC+TGG 0.472453 3_3:-55954105 Msa0459440:CDS
ATTGCCACTAGTGGCCCTCC+AGG 0.474108 3_3:+55953074 None:intergenic
GCTAATTACATGATTCCAAA+AGG 0.475595 3_3:-55953392 Msa0459440:CDS
GGCTTTGCTATTGCCACTAG+TGG 0.478391 3_3:+55953065 None:intergenic
TGTTGCTATGGACAACATAA+TGG 0.479910 3_3:-55953417 Msa0459440:CDS
ATCAATGGCTCGCAAACAAA+AGG 0.481322 3_3:-55954278 Msa0459440:CDS
TTTGTTGTTTCCATCTTTGA+GGG 0.483894 3_3:+55953837 None:intergenic
ATAGGCCATGGTTTGGGACC+GGG 0.485668 3_3:+55954609 None:intergenic
CAGAAGTGTAGCTCATAGCT+TGG 0.490205 3_3:+55954754 None:intergenic
TAGGTGGATACATAAGATAA+TGG 0.492830 3_3:-55954544 Msa0459440:CDS
GGTTGCCCTGGAATTGTGCT+TGG 0.502691 3_3:-55953209 Msa0459440:CDS
AAGTCAAGTCCTCTCAAGAA+TGG 0.507060 3_3:+55954003 None:intergenic
TTCAATGGTGATAGATACCC+TGG 0.508743 3_3:-55953092 Msa0459440:CDS
CTCCATGGCTTCAATTGGAG+TGG 0.510236 3_3:-55953152 Msa0459440:CDS
TATAGGCCATGGTTTGGGAC+CGG 0.511486 3_3:+55954608 None:intergenic
CGCTACTCTCTCAGTCGTTT+AGG 0.513167 3_3:-55954722 Msa0459440:CDS
CAAGAATTCAAGGGCAATGG+TGG 0.514918 3_3:+55954455 None:intergenic
TAATCCTCCGCATGTTGCTA+TGG 0.516226 3_3:-55953429 Msa0459440:CDS
CTTTGATGGTCATGAGAGAA+AGG 0.517624 3_3:-55953983 Msa0459440:CDS
CCCAAACCATGGCCTATAGT+TGG 0.526778 3_3:-55954603 Msa0459440:CDS
CACAAGCTTTCACAAAGTTG+AGG 0.529338 3_3:+55953489 None:intergenic
ACAACGACTAGTCCAAGAAT+CGG 0.530665 3_3:-55953522 Msa0459440:CDS
ATTGACATCAGAGGAAATCA+AGG 0.534364 3_3:-55953809 Msa0459440:CDS
ATTATTGTTGTAATTTGATG+AGG 0.538020 3_3:-55954161 Msa0459440:CDS
GACCACTCCAATTGAAGCCA+TGG 0.540922 3_3:+55953150 None:intergenic
TTATTAGGTAGGTTGCTCCA+TGG 0.546365 3_3:-55953167 Msa0459440:CDS
CGTTCTGGTTTAAACTTGTG+AGG 0.547164 3_3:+55953311 None:intergenic
AATACAAGGTACTTTGGAGA+AGG 0.547495 3_3:-55954126 Msa0459440:CDS
TTTGGAGAAGGAAGGAATGA+TGG 0.549641 3_3:-55954114 Msa0459440:CDS
GAATAACATGGACATTTCCT+AGG 0.550006 3_3:+55954490 None:intergenic
ATGAATTGTTCTCCCCTCAC+AGG 0.550585 3_3:-55954302 Msa0459440:CDS
CGAGCCATTGATGCCTGTGA+GGG 0.551166 3_3:+55954289 None:intergenic
ATTCTTTCTCAAGAATTCAA+GGG 0.552537 3_3:+55954446 None:intergenic
TCTCAAGAATTCAAGGGCAA+TGG 0.555312 3_3:+55954452 None:intergenic
GATTATATGCCATTCTTGAG+AGG 0.557251 3_3:-55954012 Msa0459440:CDS
TTGCAAATAAACCTGCAACT+AGG 0.558715 3_3:-55954563 Msa0459440:CDS
TTACACCCTTTGGGGAACAA+TGG 0.561271 3_3:-55954350 Msa0459440:CDS
ATCAGCTGTTACACCCTTTG+GGG 0.569284 3_3:-55954358 Msa0459440:CDS
AAGTTCATATCATTTAGTAC+GGG 0.569361 3_3:-55953239 Msa0459440:CDS
GCAAATTCAGCTGCATGTGA+TGG 0.572339 3_3:+55953617 None:intergenic
ATATTACCAACTATAGGCCA+TGG 0.576767 3_3:+55954597 None:intergenic
CAAGGTACTTTGGAGAAGGA+AGG 0.579507 3_3:-55954122 Msa0459440:CDS
TGATGGTGGTCCTGGTTTGG+AGG 0.582506 3_3:-55954097 Msa0459440:CDS
TCATATCATTTAGTACGGGA+AGG 0.593898 3_3:-55953235 Msa0459440:CDS
GAAATAGCGTGTATCCGCCT+AGG 0.594219 3_3:-55954507 Msa0459440:CDS
TCCACTGATATCATCAGCAA+AGG 0.601701 3_3:-55954390 Msa0459440:CDS
TGTTCAACTTCCTCCAAACC+AGG 0.606312 3_3:+55954087 None:intergenic
TAATAACATCACAGTCATTG+TGG 0.607095 3_3:+55953184 None:intergenic
GAGGAATTGGATAATGTCGT+AGG 0.607328 3_3:-55953548 Msa0459440:CDS
TCATTTAGTACGGGAAGGCG+TGG 0.607824 3_3:-55953230 Msa0459440:CDS
TTGCCACTAGTGGCCCTCCA+GGG 0.609613 3_3:+55953075 None:intergenic
TGGTTCCAAGCACAATTCCA+GGG 0.610572 3_3:+55953204 None:intergenic
GCTCGCAAACAAAAGGAATG+AGG 0.613585 3_3:-55954271 Msa0459440:CDS
TGAATGTTAGGATTGTTACA+AGG 0.613912 3_3:-55954185 Msa0459440:CDS
TTCTTGCAGGAACTTGTGCT+AGG 0.615152 3_3:-55953653 Msa0459440:intron
TGGTCATGAGAGAAAGGTGA+AGG 0.615917 3_3:-55953977 Msa0459440:CDS
GGAACTTGTGCTAGGTGGCG+TGG 0.617491 3_3:-55953645 Msa0459440:CDS
TTGCAGGAACTTGTGCTAGG+TGG 0.621774 3_3:-55953650 Msa0459440:intron
CAAACCATTATTGACATCAG+AGG 0.621987 3_3:-55953818 Msa0459440:CDS
CAAATAAACCTGCAACTAGG+TGG 0.622519 3_3:-55954560 Msa0459440:CDS
TACCACCCGGTCCCAAACCA+TGG 0.625239 3_3:-55954614 Msa0459440:CDS
ACCTTTGCTGATGATATCAG+TGG 0.632000 3_3:+55954389 None:intergenic
GAAGGATGCTATGAGTATTG+TGG 0.632731 3_3:-55953959 Msa0459440:CDS
GCGAGCCATTGATGCCTGTG+AGG 0.633714 3_3:+55954288 None:intergenic
TCAATGGATGATGCATTAGG+AGG 0.633784 3_3:+55953128 None:intergenic
ATACCCTGGAGGGCCACTAG+TGG 0.635007 3_3:-55953078 Msa0459440:CDS
GCTGATGATATCAGTGGACA+TGG 0.636477 3_3:+55954395 None:intergenic
AAGAATTCAAGGGCAATGGT+GGG 0.637514 3_3:+55954456 None:intergenic
GGCCATGGTTTGGGACCGGG+TGG 0.649131 3_3:+55954612 None:intergenic
ATGGTGATAGATACCCTGGA+GGG 0.650089 3_3:-55953088 Msa0459440:CDS
TGACTGTGATGTTATTAGGT+AGG 0.651771 3_3:-55953178 Msa0459440:CDS
GACAGGTAACAGGAATAACA+TGG 0.653652 3_3:+55954478 None:intergenic
GGAGAAGGAAGGAATGATGG+TGG 0.694029 3_3:-55954111 Msa0459440:CDS
GACATTATCCAATTCCTCAG+TGG 0.695900 3_3:+55953553 None:intergenic
ACGACTGAGAGAGTAGCGGT+AGG 0.696421 3_3:+55954727 None:intergenic
ATGTTGTCCATAGCAACATG+CGG 0.704337 3_3:+55953422 None:intergenic
TTGTCCATAGCAACATGCGG+AGG 0.707022 3_3:+55953425 None:intergenic
TTTACTTCAACGAGCCACTG+AGG 0.711642 3_3:-55953567 Msa0459440:CDS
GAGCCATTGATGCCTGTGAG+GGG 0.718073 3_3:+55954290 None:intergenic
TAACATGGACATTTCCTAGG+CGG 0.719369 3_3:+55954493 None:intergenic
AATGGTGATAGATACCCTGG+AGG 0.740316 3_3:-55953089 Msa0459440:CDS
CTAAACGACTGAGAGAGTAG+CGG 0.745832 3_3:+55954723 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTGTTGTAATTTGATG+AGG - chr3_3:55953453-55953472 Msa0459440:CDS 20.0%
!!! TTGATAGTAGAATTGAAAAA+TGG - chr3_3:55953699-55953718 Msa0459440:intron 20.0%
!! AAAATCATTAACAACTAACA+AGG - chr3_3:55953932-55953951 Msa0459440:CDS 20.0%
!! ATTATTGTTGTAATTTGATG+AGG - chr3_3:55953453-55953472 Msa0459440:CDS 20.0%
!!! TTGATAGTAGAATTGAAAAA+TGG - chr3_3:55953699-55953718 Msa0459440:intron 20.0%
!! AAAATCATTAACAACTAACA+AGG - chr3_3:55953932-55953951 Msa0459440:CDS 20.0%
! ATTCTTTCTCAAGAATTCAA+GGG + chr3_3:55953171-55953190 None:intergenic 25.0%
! TGCAAAAATGCAAATGATAA+TGG - chr3_3:55953401-55953420 Msa0459440:CDS 25.0%
! TTGTAATTTGATGAGGAAAT+TGG - chr3_3:55953460-55953479 Msa0459440:CDS 25.0%
!!! GGAAATTGGTTTTTAATACA+AGG - chr3_3:55953474-55953493 Msa0459440:CDS 25.0%
!!! GTTTTTAATACAAGGTACTT+TGG - chr3_3:55953482-55953501 Msa0459440:CDS 25.0%
! AGAATTGAAAAATGGAAAGA+TGG - chr3_3:55953707-55953726 Msa0459440:intron 25.0%
! GGAGGATTAAAAATTGTAAT+CGG + chr3_3:55954174-55954193 None:intergenic 25.0%
! AACGCCATTTAAAAAATGAT+GGG - chr3_3:55954322-55954341 Msa0459440:CDS 25.0%
! AATGATATGAACTTCAAATC+TGG + chr3_3:55954369-55954388 None:intergenic 25.0%
! GAAGTTCATATCATTTAGTA+CGG - chr3_3:55954374-55954393 Msa0459440:CDS 25.0%
! AAGTTCATATCATTTAGTAC+GGG - chr3_3:55954375-55954394 Msa0459440:CDS 25.0%
! ATGACGATGTTTAGTTAATA+AGG - chr3_3:55954645-55954664 Msa0459440:CDS 25.0%
! TGACGATGTTTAGTTAATAA+GGG - chr3_3:55954646-55954665 Msa0459440:CDS 25.0%
!!! AGTGTTCTAAAGTTTAGTAA+TGG - chr3_3:55954725-55954744 Msa0459440:CDS 25.0%
!!! GTGTTCTAAAGTTTAGTAAT+GGG - chr3_3:55954726-55954745 Msa0459440:CDS 25.0%
! ATTCTTTCTCAAGAATTCAA+GGG + chr3_3:55953171-55953190 None:intergenic 25.0%
! TGCAAAAATGCAAATGATAA+TGG - chr3_3:55953401-55953420 Msa0459440:CDS 25.0%
! TTGTAATTTGATGAGGAAAT+TGG - chr3_3:55953460-55953479 Msa0459440:CDS 25.0%
!!! GGAAATTGGTTTTTAATACA+AGG - chr3_3:55953474-55953493 Msa0459440:CDS 25.0%
!!! GTTTTTAATACAAGGTACTT+TGG - chr3_3:55953482-55953501 Msa0459440:CDS 25.0%
! AGAATTGAAAAATGGAAAGA+TGG - chr3_3:55953707-55953726 Msa0459440:intron 25.0%
! GGAGGATTAAAAATTGTAAT+CGG + chr3_3:55954174-55954193 None:intergenic 25.0%
! AACGCCATTTAAAAAATGAT+GGG - chr3_3:55954322-55954341 Msa0459440:CDS 25.0%
! AATGATATGAACTTCAAATC+TGG + chr3_3:55954369-55954388 None:intergenic 25.0%
! GAAGTTCATATCATTTAGTA+CGG - chr3_3:55954374-55954393 Msa0459440:CDS 25.0%
! AAGTTCATATCATTTAGTAC+GGG - chr3_3:55954375-55954394 Msa0459440:CDS 25.0%
! ATGACGATGTTTAGTTAATA+AGG - chr3_3:55954645-55954664 Msa0459440:CDS 25.0%
! TGACGATGTTTAGTTAATAA+GGG - chr3_3:55954646-55954665 Msa0459440:CDS 25.0%
!!! AGTGTTCTAAAGTTTAGTAA+TGG - chr3_3:55954725-55954744 Msa0459440:CDS 25.0%
!!! GTGTTCTAAAGTTTAGTAAT+GGG - chr3_3:55954726-55954745 Msa0459440:CDS 25.0%
TCAGGAATATTACCAACTAT+AGG + chr3_3:55953026-55953045 None:intergenic 30.0%
TAGGTGGATACATAAGATAA+TGG - chr3_3:55953070-55953089 Msa0459440:CDS 30.0%
CATTCTTTCTCAAGAATTCA+AGG + chr3_3:55953172-55953191 None:intergenic 30.0%
!! ATAATGGTCTTGTGAATGTT+AGG - chr3_3:55953417-55953436 Msa0459440:CDS 30.0%
TGAATGTTAGGATTGTTACA+AGG - chr3_3:55953429-55953448 Msa0459440:CDS 30.0%
! ATCAAAGACTATTGCTGATT+CGG - chr3_3:55953730-55953749 Msa0459440:intron 30.0%
!! ATTTTAATCTCCCTCAAAGA+TGG - chr3_3:55953767-55953786 Msa0459440:intron 30.0%
!! TTTGTTGTTTCCATCTTTGA+GGG + chr3_3:55953780-55953799 None:intergenic 30.0%
ATTTCCTCTGATGTCAATAA+TGG + chr3_3:55953803-55953822 None:intergenic 30.0%
TGTTTGATGCTACAATTTCT+CGG + chr3_3:55953901-55953920 None:intergenic 30.0%
AACAAGGTTAAAATTCTTGC+AGG - chr3_3:55953948-55953967 Msa0459440:CDS 30.0%
GCTAATTACATGATTCCAAA+AGG - chr3_3:55954222-55954241 Msa0459440:CDS 30.0%
! CTTGTTTGCTTAAAAGTACA+TGG + chr3_3:55954251-55954270 None:intergenic 30.0%
! CATGTACTTTTAAGCAAACA+AGG - chr3_3:55954249-55954268 Msa0459440:CDS 30.0%
!!! TCATTTTTTAAATGGCGTTC+TGG + chr3_3:55954321-55954340 None:intergenic 30.0%
GAACGCCATTTAAAAAATGA+TGG - chr3_3:55954321-55954340 Msa0459440:CDS 30.0%
!!! CAGACCCATCATTTTTTAAA+TGG + chr3_3:55954329-55954348 None:intergenic 30.0%
!! TTTAAAAAATGATGGGTCTG+TGG - chr3_3:55954329-55954348 Msa0459440:CDS 30.0%
TAATAACATCACAGTCATTG+TGG + chr3_3:55954433-55954452 None:intergenic 30.0%
ACAATGACTGTGATGTTATT+AGG - chr3_3:55954432-55954451 Msa0459440:CDS 30.0%
GAAATACTTGAGAAGTTCAA+TGG + chr3_3:55954505-55954524 None:intergenic 30.0%
GAACTTCTCAAGTATTTCAA+TGG - chr3_3:55954507-55954526 Msa0459440:CDS 30.0%
ACTAAACATCGTCATATAAG+AGG + chr3_3:55954640-55954659 None:intergenic 30.0%
GGAAAATGAATCAGTAAAAC+TGG - chr3_3:55954667-55954686 Msa0459440:CDS 30.0%
TCAGGAATATTACCAACTAT+AGG + chr3_3:55953026-55953045 None:intergenic 30.0%
TAGGTGGATACATAAGATAA+TGG - chr3_3:55953070-55953089 Msa0459440:CDS 30.0%
CATTCTTTCTCAAGAATTCA+AGG + chr3_3:55953172-55953191 None:intergenic 30.0%
!! ATAATGGTCTTGTGAATGTT+AGG - chr3_3:55953417-55953436 Msa0459440:CDS 30.0%
TGAATGTTAGGATTGTTACA+AGG - chr3_3:55953429-55953448 Msa0459440:CDS 30.0%
! ATCAAAGACTATTGCTGATT+CGG - chr3_3:55953730-55953749 Msa0459440:intron 30.0%
!! ATTTTAATCTCCCTCAAAGA+TGG - chr3_3:55953767-55953786 Msa0459440:intron 30.0%
!! TTTGTTGTTTCCATCTTTGA+GGG + chr3_3:55953780-55953799 None:intergenic 30.0%
ATTTCCTCTGATGTCAATAA+TGG + chr3_3:55953803-55953822 None:intergenic 30.0%
TGTTTGATGCTACAATTTCT+CGG + chr3_3:55953901-55953920 None:intergenic 30.0%
AACAAGGTTAAAATTCTTGC+AGG - chr3_3:55953948-55953967 Msa0459440:CDS 30.0%
GCTAATTACATGATTCCAAA+AGG - chr3_3:55954222-55954241 Msa0459440:CDS 30.0%
! CTTGTTTGCTTAAAAGTACA+TGG + chr3_3:55954251-55954270 None:intergenic 30.0%
! CATGTACTTTTAAGCAAACA+AGG - chr3_3:55954249-55954268 Msa0459440:CDS 30.0%
!!! TCATTTTTTAAATGGCGTTC+TGG + chr3_3:55954321-55954340 None:intergenic 30.0%
GAACGCCATTTAAAAAATGA+TGG - chr3_3:55954321-55954340 Msa0459440:CDS 30.0%
!!! CAGACCCATCATTTTTTAAA+TGG + chr3_3:55954329-55954348 None:intergenic 30.0%
!! TTTAAAAAATGATGGGTCTG+TGG - chr3_3:55954329-55954348 Msa0459440:CDS 30.0%
TAATAACATCACAGTCATTG+TGG + chr3_3:55954433-55954452 None:intergenic 30.0%
ACAATGACTGTGATGTTATT+AGG - chr3_3:55954432-55954451 Msa0459440:CDS 30.0%
GAAATACTTGAGAAGTTCAA+TGG + chr3_3:55954505-55954524 None:intergenic 30.0%
GAACTTCTCAAGTATTTCAA+TGG - chr3_3:55954507-55954526 Msa0459440:CDS 30.0%
ACTAAACATCGTCATATAAG+AGG + chr3_3:55954640-55954659 None:intergenic 30.0%
GGAAAATGAATCAGTAAAAC+TGG - chr3_3:55954667-55954686 Msa0459440:CDS 30.0%
CTCAACAAAGTGGTATCTTA+TGG + chr3_3:55952961-55952980 None:intergenic 35.0%
!!! TTTTAGGGTTCTCAACAAAG+TGG + chr3_3:55952971-55952990 None:intergenic 35.0%
!!! GTGGTAGTTTGGCTTTTTTA+GGG + chr3_3:55952986-55953005 None:intergenic 35.0%
ATATTACCAACTATAGGCCA+TGG + chr3_3:55953020-55953039 None:intergenic 35.0%
GGTTTATTTGCAAGCATTTC+AGG + chr3_3:55953044-55953063 None:intergenic 35.0%
TTGCAAATAAACCTGCAACT+AGG - chr3_3:55953051-55953070 Msa0459440:CDS 35.0%
GAATAACATGGACATTTCCT+AGG + chr3_3:55953127-55953146 None:intergenic 35.0%
ATATCAGTGGACATGGATAT+TGG + chr3_3:55953215-55953234 None:intergenic 35.0%
TATCATCAGCAAAGGTTTCT+TGG - chr3_3:55953232-55953251 Msa0459440:CDS 35.0%
! TTTTTCCATTGTTCCCCAAA+GGG + chr3_3:55953272-55953291 None:intergenic 35.0%
!!! TTTTTTCCATTGTTCCCCAA+AGG + chr3_3:55953273-55953292 None:intergenic 35.0%
! AATACAAGGTACTTTGGAGA+AGG - chr3_3:55953488-55953507 Msa0459440:CDS 35.0%
GATTATATGCCATTCTTGAG+AGG - chr3_3:55953602-55953621 Msa0459440:CDS 35.0%
!! GTTTGTTGTTTCCATCTTTG+AGG + chr3_3:55953781-55953800 None:intergenic 35.0%
CAAACCATTATTGACATCAG+AGG - chr3_3:55953796-55953815 Msa0459440:intron 35.0%
ATTGACATCAGAGGAAATCA+AGG - chr3_3:55953805-55953824 Msa0459440:CDS 35.0%
!!! GGTTTTGAATATCCGATTCT+TGG + chr3_3:55954107-55954126 None:intergenic 35.0%
TGTTGCTATGGACAACATAA+TGG - chr3_3:55954197-55954216 Msa0459440:CDS 35.0%
!! AAAAGTACATGGCTACCTTT+TGG + chr3_3:55954240-55954259 None:intergenic 35.0%
! CTTTTAAGCAAACAAGGACT+CGG - chr3_3:55954255-55954274 Msa0459440:CDS 35.0%
! TGAGGTTCATTCCAAACTTT+TGG + chr3_3:55954288-55954307 None:intergenic 35.0%
TCATATCATTTAGTACGGGA+AGG - chr3_3:55954379-55954398 Msa0459440:CDS 35.0%
TGACTGTGATGTTATTAGGT+AGG - chr3_3:55954436-55954455 Msa0459440:CDS 35.0%
AGTTCAATGGATGATGCATT+AGG + chr3_3:55954492-55954511 None:intergenic 35.0%
TATAATTCTGCTGCCAATCT+TGG + chr3_3:55954573-55954592 None:intergenic 35.0%
CTCAACAAAGTGGTATCTTA+TGG + chr3_3:55952961-55952980 None:intergenic 35.0%
!!! TTTTAGGGTTCTCAACAAAG+TGG + chr3_3:55952971-55952990 None:intergenic 35.0%
!!! GTGGTAGTTTGGCTTTTTTA+GGG + chr3_3:55952986-55953005 None:intergenic 35.0%
ATATTACCAACTATAGGCCA+TGG + chr3_3:55953020-55953039 None:intergenic 35.0%
GGTTTATTTGCAAGCATTTC+AGG + chr3_3:55953044-55953063 None:intergenic 35.0%
TTGCAAATAAACCTGCAACT+AGG - chr3_3:55953051-55953070 Msa0459440:CDS 35.0%
GAATAACATGGACATTTCCT+AGG + chr3_3:55953127-55953146 None:intergenic 35.0%
ATATCAGTGGACATGGATAT+TGG + chr3_3:55953215-55953234 None:intergenic 35.0%
TATCATCAGCAAAGGTTTCT+TGG - chr3_3:55953232-55953251 Msa0459440:CDS 35.0%
! TTTTTCCATTGTTCCCCAAA+GGG + chr3_3:55953272-55953291 None:intergenic 35.0%
!!! TTTTTTCCATTGTTCCCCAA+AGG + chr3_3:55953273-55953292 None:intergenic 35.0%
! AATACAAGGTACTTTGGAGA+AGG - chr3_3:55953488-55953507 Msa0459440:CDS 35.0%
GATTATATGCCATTCTTGAG+AGG - chr3_3:55953602-55953621 Msa0459440:CDS 35.0%
!! GTTTGTTGTTTCCATCTTTG+AGG + chr3_3:55953781-55953800 None:intergenic 35.0%
CAAACCATTATTGACATCAG+AGG - chr3_3:55953796-55953815 Msa0459440:intron 35.0%
ATTGACATCAGAGGAAATCA+AGG - chr3_3:55953805-55953824 Msa0459440:CDS 35.0%
!!! GGTTTTGAATATCCGATTCT+TGG + chr3_3:55954107-55954126 None:intergenic 35.0%
TGTTGCTATGGACAACATAA+TGG - chr3_3:55954197-55954216 Msa0459440:CDS 35.0%
!! AAAAGTACATGGCTACCTTT+TGG + chr3_3:55954240-55954259 None:intergenic 35.0%
! CTTTTAAGCAAACAAGGACT+CGG - chr3_3:55954255-55954274 Msa0459440:CDS 35.0%
! TGAGGTTCATTCCAAACTTT+TGG + chr3_3:55954288-55954307 None:intergenic 35.0%
TCATATCATTTAGTACGGGA+AGG - chr3_3:55954379-55954398 Msa0459440:CDS 35.0%
TGACTGTGATGTTATTAGGT+AGG - chr3_3:55954436-55954455 Msa0459440:CDS 35.0%
AGTTCAATGGATGATGCATT+AGG + chr3_3:55954492-55954511 None:intergenic 35.0%
TATAATTCTGCTGCCAATCT+TGG + chr3_3:55954573-55954592 None:intergenic 35.0%
!!! GGTGGTAGTTTGGCTTTTTT+AGG + chr3_3:55952987-55953006 None:intergenic 40.0%
AAAAAAGCCAAACTACCACC+CGG - chr3_3:55952987-55953006 Msa0459440:three_prime_UTR 40.0%
CAAATAAACCTGCAACTAGG+TGG - chr3_3:55953054-55953073 Msa0459440:CDS 40.0%
TTATGTATCCACCTAGTTGC+AGG + chr3_3:55953065-55953084 None:intergenic 40.0%
TAACATGGACATTTCCTAGG+CGG + chr3_3:55953124-55953143 None:intergenic 40.0%
GACAGGTAACAGGAATAACA+TGG + chr3_3:55953139-55953158 None:intergenic 40.0%
AAGAATTCAAGGGCAATGGT+GGG + chr3_3:55953161-55953180 None:intergenic 40.0%
TCTCAAGAATTCAAGGGCAA+TGG + chr3_3:55953165-55953184 None:intergenic 40.0%
TCCACTGATATCATCAGCAA+AGG - chr3_3:55953224-55953243 Msa0459440:CDS 40.0%
ACCTTTGCTGATGATATCAG+TGG + chr3_3:55953228-55953247 None:intergenic 40.0%
ATCAATGGCTCGCAAACAAA+AGG - chr3_3:55953336-55953355 Msa0459440:CDS 40.0%
TTTGGAGAAGGAAGGAATGA+TGG - chr3_3:55953500-55953519 Msa0459440:CDS 40.0%
AAGTCAAGTCCTCTCAAGAA+TGG + chr3_3:55953614-55953633 None:intergenic 40.0%
TTGAGAGGACTTGACTTTGA+TGG - chr3_3:55953617-55953636 Msa0459440:CDS 40.0%
! CTTTGATGGTCATGAGAGAA+AGG - chr3_3:55953631-55953650 Msa0459440:CDS 40.0%
! GAAGGATGCTATGAGTATTG+TGG - chr3_3:55953655-55953674 Msa0459440:intron 40.0%
GACATTATCCAATTCCTCAG+TGG + chr3_3:55954064-55954083 None:intergenic 40.0%
GAGGAATTGGATAATGTCGT+AGG - chr3_3:55954066-55954085 Msa0459440:CDS 40.0%
! ACAACGACTAGTCCAAGAAT+CGG - chr3_3:55954092-55954111 Msa0459440:CDS 40.0%
CACAAGCTTTCACAAAGTTG+AGG + chr3_3:55954128-55954147 None:intergenic 40.0%
ATGTTGTCCATAGCAACATG+CGG + chr3_3:55954195-55954214 None:intergenic 40.0%
TCGGACGAAATCCAAAAGTT+TGG - chr3_3:55954274-55954293 Msa0459440:CDS 40.0%
!! CGTTCTGGTTTAAACTTGTG+AGG + chr3_3:55954306-55954325 None:intergenic 40.0%
!!! TGGGTCTGTGGTAGTTTTTT+TGG - chr3_3:55954341-55954360 Msa0459440:CDS 40.0%
TTATTAGGTAGGTTGCTCCA+TGG - chr3_3:55954447-55954466 Msa0459440:CDS 40.0%
TCAATGGATGATGCATTAGG+AGG + chr3_3:55954489-55954508 None:intergenic 40.0%
TTCAATGGTGATAGATACCC+TGG - chr3_3:55954522-55954541 Msa0459440:CDS 40.0%
!!! GGTGGTAGTTTGGCTTTTTT+AGG + chr3_3:55952987-55953006 None:intergenic 40.0%
AAAAAAGCCAAACTACCACC+CGG - chr3_3:55952987-55953006 Msa0459440:three_prime_UTR 40.0%
CAAATAAACCTGCAACTAGG+TGG - chr3_3:55953054-55953073 Msa0459440:CDS 40.0%
TTATGTATCCACCTAGTTGC+AGG + chr3_3:55953065-55953084 None:intergenic 40.0%
TAACATGGACATTTCCTAGG+CGG + chr3_3:55953124-55953143 None:intergenic 40.0%
GACAGGTAACAGGAATAACA+TGG + chr3_3:55953139-55953158 None:intergenic 40.0%
AAGAATTCAAGGGCAATGGT+GGG + chr3_3:55953161-55953180 None:intergenic 40.0%
TCTCAAGAATTCAAGGGCAA+TGG + chr3_3:55953165-55953184 None:intergenic 40.0%
TCCACTGATATCATCAGCAA+AGG - chr3_3:55953224-55953243 Msa0459440:CDS 40.0%
ACCTTTGCTGATGATATCAG+TGG + chr3_3:55953228-55953247 None:intergenic 40.0%
ATCAATGGCTCGCAAACAAA+AGG - chr3_3:55953336-55953355 Msa0459440:CDS 40.0%
TTTGGAGAAGGAAGGAATGA+TGG - chr3_3:55953500-55953519 Msa0459440:CDS 40.0%
AAGTCAAGTCCTCTCAAGAA+TGG + chr3_3:55953614-55953633 None:intergenic 40.0%
TTGAGAGGACTTGACTTTGA+TGG - chr3_3:55953617-55953636 Msa0459440:CDS 40.0%
! CTTTGATGGTCATGAGAGAA+AGG - chr3_3:55953631-55953650 Msa0459440:CDS 40.0%
! GAAGGATGCTATGAGTATTG+TGG - chr3_3:55953655-55953674 Msa0459440:intron 40.0%
GACATTATCCAATTCCTCAG+TGG + chr3_3:55954064-55954083 None:intergenic 40.0%
GAGGAATTGGATAATGTCGT+AGG - chr3_3:55954066-55954085 Msa0459440:CDS 40.0%
! ACAACGACTAGTCCAAGAAT+CGG - chr3_3:55954092-55954111 Msa0459440:CDS 40.0%
CACAAGCTTTCACAAAGTTG+AGG + chr3_3:55954128-55954147 None:intergenic 40.0%
ATGTTGTCCATAGCAACATG+CGG + chr3_3:55954195-55954214 None:intergenic 40.0%
TCGGACGAAATCCAAAAGTT+TGG - chr3_3:55954274-55954293 Msa0459440:CDS 40.0%
!! CGTTCTGGTTTAAACTTGTG+AGG + chr3_3:55954306-55954325 None:intergenic 40.0%
!!! TGGGTCTGTGGTAGTTTTTT+TGG - chr3_3:55954341-55954360 Msa0459440:CDS 40.0%
TTATTAGGTAGGTTGCTCCA+TGG - chr3_3:55954447-55954466 Msa0459440:CDS 40.0%
TCAATGGATGATGCATTAGG+AGG + chr3_3:55954489-55954508 None:intergenic 40.0%
TTCAATGGTGATAGATACCC+TGG - chr3_3:55954522-55954541 Msa0459440:CDS 40.0%
! CAGAAGTGTAGCTCATAGCT+TGG + chr3_3:55952863-55952882 None:intergenic 45.0%
CAAGCTATGAGCTACACTTC+TGG - chr3_3:55952861-55952880 Msa0459440:three_prime_UTR 45.0%
CTAAACGACTGAGAGAGTAG+CGG + chr3_3:55952894-55952913 None:intergenic 45.0%
CCAACTATAGGCCATGGTTT+GGG + chr3_3:55953014-55953033 None:intergenic 45.0%
ACCAACTATAGGCCATGGTT+TGG + chr3_3:55953015-55953034 None:intergenic 45.0%
CAAGAATTCAAGGGCAATGG+TGG + chr3_3:55953162-55953181 None:intergenic 45.0%
GCTGATGATATCAGTGGACA+TGG + chr3_3:55953222-55953241 None:intergenic 45.0%
CATCAGCTGTTACACCCTTT+GGG - chr3_3:55953255-55953274 Msa0459440:CDS 45.0%
ATCAGCTGTTACACCCTTTG+GGG - chr3_3:55953256-55953275 Msa0459440:CDS 45.0%
! TTACACCCTTTGGGGAACAA+TGG - chr3_3:55953264-55953283 Msa0459440:CDS 45.0%
ATGAATTGTTCTCCCCTCAC+AGG - chr3_3:55953312-55953331 Msa0459440:CDS 45.0%
GCTCGCAAACAAAAGGAATG+AGG - chr3_3:55953343-55953362 Msa0459440:CDS 45.0%
! CAAGGTACTTTGGAGAAGGA+AGG - chr3_3:55953492-55953511 Msa0459440:CDS 45.0%
TGTTCAACTTCCTCCAAACC+AGG + chr3_3:55953530-55953549 None:intergenic 45.0%
TGGTCATGAGAGAAAGGTGA+AGG - chr3_3:55953637-55953656 Msa0459440:CDS 45.0%
TTCTTGCAGGAACTTGTGCT+AGG - chr3_3:55953961-55953980 Msa0459440:CDS 45.0%
GCAAATTCAGCTGCATGTGA+TGG + chr3_3:55954000-55954019 None:intergenic 45.0%
GTGGCTCGTTGAAGTAAATC+TGG + chr3_3:55954045-55954064 None:intergenic 45.0%
TTTACTTCAACGAGCCACTG+AGG - chr3_3:55954047-55954066 Msa0459440:CDS 45.0%
TAATCCTCCGCATGTTGCTA+TGG - chr3_3:55954185-55954204 Msa0459440:CDS 45.0%
TGGTTCCAAGCACAATTCCA+GGG + chr3_3:55954413-55954432 None:intergenic 45.0%
AATGGTGATAGATACCCTGG+AGG - chr3_3:55954525-55954544 Msa0459440:CDS 45.0%
ATGGTGATAGATACCCTGGA+GGG - chr3_3:55954526-55954545 Msa0459440:CDS 45.0%
GGCAATAGCAAAGCCAAGAT+TGG - chr3_3:55954557-55954576 Msa0459440:CDS 45.0%
! CAGAAGTGTAGCTCATAGCT+TGG + chr3_3:55952863-55952882 None:intergenic 45.0%
CAAGCTATGAGCTACACTTC+TGG - chr3_3:55952861-55952880 Msa0459440:three_prime_UTR 45.0%
CTAAACGACTGAGAGAGTAG+CGG + chr3_3:55952894-55952913 None:intergenic 45.0%
CCAACTATAGGCCATGGTTT+GGG + chr3_3:55953014-55953033 None:intergenic 45.0%
ACCAACTATAGGCCATGGTT+TGG + chr3_3:55953015-55953034 None:intergenic 45.0%
CAAGAATTCAAGGGCAATGG+TGG + chr3_3:55953162-55953181 None:intergenic 45.0%
GCTGATGATATCAGTGGACA+TGG + chr3_3:55953222-55953241 None:intergenic 45.0%
CATCAGCTGTTACACCCTTT+GGG - chr3_3:55953255-55953274 Msa0459440:CDS 45.0%
ATCAGCTGTTACACCCTTTG+GGG - chr3_3:55953256-55953275 Msa0459440:CDS 45.0%
! TTACACCCTTTGGGGAACAA+TGG - chr3_3:55953264-55953283 Msa0459440:CDS 45.0%
ATGAATTGTTCTCCCCTCAC+AGG - chr3_3:55953312-55953331 Msa0459440:CDS 45.0%
GCTCGCAAACAAAAGGAATG+AGG - chr3_3:55953343-55953362 Msa0459440:CDS 45.0%
! CAAGGTACTTTGGAGAAGGA+AGG - chr3_3:55953492-55953511 Msa0459440:CDS 45.0%
TGTTCAACTTCCTCCAAACC+AGG + chr3_3:55953530-55953549 None:intergenic 45.0%
TGGTCATGAGAGAAAGGTGA+AGG - chr3_3:55953637-55953656 Msa0459440:CDS 45.0%
TTCTTGCAGGAACTTGTGCT+AGG - chr3_3:55953961-55953980 Msa0459440:CDS 45.0%
GCAAATTCAGCTGCATGTGA+TGG + chr3_3:55954000-55954019 None:intergenic 45.0%
GTGGCTCGTTGAAGTAAATC+TGG + chr3_3:55954045-55954064 None:intergenic 45.0%
TTTACTTCAACGAGCCACTG+AGG - chr3_3:55954047-55954066 Msa0459440:CDS 45.0%
TAATCCTCCGCATGTTGCTA+TGG - chr3_3:55954185-55954204 Msa0459440:CDS 45.0%
TGGTTCCAAGCACAATTCCA+GGG + chr3_3:55954413-55954432 None:intergenic 45.0%
AATGGTGATAGATACCCTGG+AGG - chr3_3:55954525-55954544 Msa0459440:CDS 45.0%
ATGGTGATAGATACCCTGGA+GGG - chr3_3:55954526-55954545 Msa0459440:CDS 45.0%
GGCAATAGCAAAGCCAAGAT+TGG - chr3_3:55954557-55954576 Msa0459440:CDS 45.0%
!! TAAAACTAAAAAATATAATA+AGG + chr3_3:55952926-55952945 None:intergenic 5.0%
!!! TATTATATTTTTTAGTTTTA+TGG - chr3_3:55952926-55952945 Msa0459440:three_prime_UTR 5.0%
!! AAATATTTGAAAATTTAATA+AGG - chr3_3:55954602-55954621 Msa0459440:CDS 5.0%
!! TAAAACTAAAAAATATAATA+AGG + chr3_3:55952926-55952945 None:intergenic 5.0%
!!! TATTATATTTTTTAGTTTTA+TGG - chr3_3:55952926-55952945 Msa0459440:three_prime_UTR 5.0%
!! AAATATTTGAAAATTTAATA+AGG - chr3_3:55954602-55954621 Msa0459440:CDS 5.0%
CGCTACTCTCTCAGTCGTTT+AGG - chr3_3:55952892-55952911 Msa0459440:three_prime_UTR 50.0%
! TATAGGCCATGGTTTGGGAC+CGG + chr3_3:55953009-55953028 None:intergenic 50.0%
CCCAAACCATGGCCTATAGT+TGG - chr3_3:55953011-55953030 Msa0459440:three_prime_UTR 50.0%
GAAATAGCGTGTATCCGCCT+AGG - chr3_3:55953107-55953126 Msa0459440:CDS 50.0%
GCATCAGCTGTTACACCCTT+TGG - chr3_3:55953254-55953273 Msa0459440:CDS 50.0%
GGAGAAGGAAGGAATGATGG+TGG - chr3_3:55953503-55953522 Msa0459440:CDS 50.0%
!! GAATGATGGTGGTCCTGGTT+TGG - chr3_3:55953514-55953533 Msa0459440:CDS 50.0%
TTGCAGGAACTTGTGCTAGG+TGG - chr3_3:55953964-55953983 Msa0459440:CDS 50.0%
TCAACGAGCCACTGAGGAAT+TGG - chr3_3:55954053-55954072 Msa0459440:CDS 50.0%
TTGTCCATAGCAACATGCGG+AGG + chr3_3:55954192-55954211 None:intergenic 50.0%
TCATTTAGTACGGGAAGGCG+TGG - chr3_3:55954384-55954403 Msa0459440:CDS 50.0%
GTGGTTCCAAGCACAATTCC+AGG + chr3_3:55954414-55954433 None:intergenic 50.0%
GGTTGCTCCATGGCTTCAAT+TGG - chr3_3:55954457-55954476 Msa0459440:CDS 50.0%
CTCCATGGCTTCAATTGGAG+TGG - chr3_3:55954462-55954481 Msa0459440:CDS 50.0%
GACCACTCCAATTGAAGCCA+TGG + chr3_3:55954467-55954486 None:intergenic 50.0%
!! GGCTTTGCTATTGCCACTAG+TGG + chr3_3:55954552-55954571 None:intergenic 50.0%
CGCTACTCTCTCAGTCGTTT+AGG - chr3_3:55952892-55952911 Msa0459440:three_prime_UTR 50.0%
! TATAGGCCATGGTTTGGGAC+CGG + chr3_3:55953009-55953028 None:intergenic 50.0%
CCCAAACCATGGCCTATAGT+TGG - chr3_3:55953011-55953030 Msa0459440:three_prime_UTR 50.0%
GAAATAGCGTGTATCCGCCT+AGG - chr3_3:55953107-55953126 Msa0459440:CDS 50.0%
GCATCAGCTGTTACACCCTT+TGG - chr3_3:55953254-55953273 Msa0459440:CDS 50.0%
GGAGAAGGAAGGAATGATGG+TGG - chr3_3:55953503-55953522 Msa0459440:CDS 50.0%
!! GAATGATGGTGGTCCTGGTT+TGG - chr3_3:55953514-55953533 Msa0459440:CDS 50.0%
TTGCAGGAACTTGTGCTAGG+TGG - chr3_3:55953964-55953983 Msa0459440:CDS 50.0%
TCAACGAGCCACTGAGGAAT+TGG - chr3_3:55954053-55954072 Msa0459440:CDS 50.0%
TTGTCCATAGCAACATGCGG+AGG + chr3_3:55954192-55954211 None:intergenic 50.0%
TCATTTAGTACGGGAAGGCG+TGG - chr3_3:55954384-55954403 Msa0459440:CDS 50.0%
GTGGTTCCAAGCACAATTCC+AGG + chr3_3:55954414-55954433 None:intergenic 50.0%
GGTTGCTCCATGGCTTCAAT+TGG - chr3_3:55954457-55954476 Msa0459440:CDS 50.0%
CTCCATGGCTTCAATTGGAG+TGG - chr3_3:55954462-55954481 Msa0459440:CDS 50.0%
GACCACTCCAATTGAAGCCA+TGG + chr3_3:55954467-55954486 None:intergenic 50.0%
!! GGCTTTGCTATTGCCACTAG+TGG + chr3_3:55954552-55954571 None:intergenic 50.0%
ACGACTGAGAGAGTAGCGGT+AGG + chr3_3:55952890-55952909 None:intergenic 55.0%
! TTTGGGACCGGGTGGTAGTT+TGG + chr3_3:55952997-55953016 None:intergenic 55.0%
! ATAGGCCATGGTTTGGGACC+GGG + chr3_3:55953008-55953027 None:intergenic 55.0%
! GCAATGGTGGGACAGGTAAC+AGG + chr3_3:55953149-55953168 None:intergenic 55.0%
! TTCAAGGGCAATGGTGGGAC+AGG + chr3_3:55953156-55953175 None:intergenic 55.0%
TCTCCCCTCACAGGCATCAA+TGG - chr3_3:55953321-55953340 Msa0459440:CDS 55.0%
GAGCCATTGATGCCTGTGAG+GGG + chr3_3:55953327-55953346 None:intergenic 55.0%
CGAGCCATTGATGCCTGTGA+GGG + chr3_3:55953328-55953347 None:intergenic 55.0%
!! GGAAGGAATGATGGTGGTCC+TGG - chr3_3:55953509-55953528 Msa0459440:CDS 55.0%
!! TGATGGTGGTCCTGGTTTGG+AGG - chr3_3:55953517-55953536 Msa0459440:CDS 55.0%
GGTTGCCCTGGAATTGTGCT+TGG - chr3_3:55954405-55954424 Msa0459440:CDS 55.0%
ACGACTGAGAGAGTAGCGGT+AGG + chr3_3:55952890-55952909 None:intergenic 55.0%
! TTTGGGACCGGGTGGTAGTT+TGG + chr3_3:55952997-55953016 None:intergenic 55.0%
! ATAGGCCATGGTTTGGGACC+GGG + chr3_3:55953008-55953027 None:intergenic 55.0%
! GCAATGGTGGGACAGGTAAC+AGG + chr3_3:55953149-55953168 None:intergenic 55.0%
! TTCAAGGGCAATGGTGGGAC+AGG + chr3_3:55953156-55953175 None:intergenic 55.0%
TCTCCCCTCACAGGCATCAA+TGG - chr3_3:55953321-55953340 Msa0459440:CDS 55.0%
GAGCCATTGATGCCTGTGAG+GGG + chr3_3:55953327-55953346 None:intergenic 55.0%
CGAGCCATTGATGCCTGTGA+GGG + chr3_3:55953328-55953347 None:intergenic 55.0%
!! GGAAGGAATGATGGTGGTCC+TGG - chr3_3:55953509-55953528 Msa0459440:CDS 55.0%
!! TGATGGTGGTCCTGGTTTGG+AGG - chr3_3:55953517-55953536 Msa0459440:CDS 55.0%
GGTTGCCCTGGAATTGTGCT+TGG - chr3_3:55954405-55954424 Msa0459440:CDS 55.0%
TACCACCCGGTCCCAAACCA+TGG - chr3_3:55953000-55953019 Msa0459440:three_prime_UTR 60.0%
GCGAGCCATTGATGCCTGTG+AGG + chr3_3:55953329-55953348 None:intergenic 60.0%
GGAACTTGTGCTAGGTGGCG+TGG - chr3_3:55953969-55953988 Msa0459440:CDS 60.0%
ATACCCTGGAGGGCCACTAG+TGG - chr3_3:55954536-55954555 Msa0459440:CDS 60.0%
TTGCCACTAGTGGCCCTCCA+GGG + chr3_3:55954542-55954561 None:intergenic 60.0%
ATTGCCACTAGTGGCCCTCC+AGG + chr3_3:55954543-55954562 None:intergenic 60.0%
TACCACCCGGTCCCAAACCA+TGG - chr3_3:55953000-55953019 Msa0459440:three_prime_UTR 60.0%
GCGAGCCATTGATGCCTGTG+AGG + chr3_3:55953329-55953348 None:intergenic 60.0%
GGAACTTGTGCTAGGTGGCG+TGG - chr3_3:55953969-55953988 Msa0459440:CDS 60.0%
ATACCCTGGAGGGCCACTAG+TGG - chr3_3:55954536-55954555 Msa0459440:CDS 60.0%
TTGCCACTAGTGGCCCTCCA+GGG + chr3_3:55954542-55954561 None:intergenic 60.0%
ATTGCCACTAGTGGCCCTCC+AGG + chr3_3:55954543-55954562 None:intergenic 60.0%
! GGCCATGGTTTGGGACCGGG+TGG + chr3_3:55953005-55953024 None:intergenic 70.0%
! ACGGGAAGGCGTGGTTGCCC+TGG - chr3_3:55954393-55954412 Msa0459440:CDS 70.0%
! GGCCATGGTTTGGGACCGGG+TGG + chr3_3:55953005-55953024 None:intergenic 70.0%
! ACGGGAAGGCGTGGTTGCCC+TGG - chr3_3:55954393-55954412 Msa0459440:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 55952852 55954784 55952852 ID=Msa0459440;Name=Msa0459440
chr3_3 mRNA 55952852 55954784 55952852 ID=Msa0459440-mRNA-1;Parent=Msa0459440;Name=Msa0459440-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|1|0.5|1|1|1|2|182|539
chr3_3 exon 55952852 55953666 55952852 ID=Msa0459440-mRNA-1:exon:11114;Parent=Msa0459440-mRNA-1
chr3_3 exon 55953798 55954784 55953798 ID=Msa0459440-mRNA-1:exon:11113;Parent=Msa0459440-mRNA-1
chr3_3 CDS 55953798 55954784 55953798 ID=Msa0459440-mRNA-1:cds;Parent=Msa0459440-mRNA-1
chr3_3 CDS 55953034 55953666 55953034 ID=Msa0459440-mRNA-1:cds;Parent=Msa0459440-mRNA-1
chr3_3 three_prime_UTR 55952852 55953033 55952852 ID=Msa0459440-mRNA-1:three_prime_utr;Parent=Msa0459440-mRNA-1
Gene Sequence

>Msa0459440

ATGCTTTTCCAAGCTATGAGCTACACTTCTGGTTTCCTACCGCTACTCTCTCAGTCGTTTAGGCATCTTTTCCTTATTATATTTTTTAGTTTTATGGTAATCAAAACCATAAGATACCACTTTGTTGAGAACCCTAAAAAAGCCAAACTACCACCCGGTCCCAAACCATGGCCTATAGTTGGTAATATTCCTGAAATGCTTGCAAATAAACCTGCAACTAGGTGGATACATAAGATAATGGAAGAATTGAACACTGAAATAGCGTGTATCCGCCTAGGAAATGTCCATGTTATTCCTGTTACCTGTCCCACCATTGCCCTTGAATTCTTGAGAAAGAATGATGCTACTTTTGCATCAAGACCAATATCCATGTCCACTGATATCATCAGCAAAGGTTTCTTGGCATCAGCTGTTACACCCTTTGGGGAACAATGGAAAAAAATGAAAAAAATATTTGTCAATGAATTGTTCTCCCCTCACAGGCATCAATGGCTCGCAAACAAAAGGAATGAGGAAGCTGATAACATAATGTTTTATGTGTACAACAAATGCAAAAATGCAAATGATAATGGTCTTGTGAATGTTAGGATTGTTACAAGGCATTATTGTTGTAATTTGATGAGGAAATTGGTTTTTAATACAAGGTACTTTGGAGAAGGAAGGAATGATGGTGGTCCTGGTTTGGAGGAAGTTGAACATGTAGATGCTATTTTCACATTGCTTAGATATGTTTTTGCATTTTGTGTTTCTGATTATATGCCATTCTTGAGAGGACTTGACTTTGATGGTCATGAGAGAAAGGTGAAGGATGCTATGAGTATTGTGGACAAGTATAATGATACAATCATTGATAGTAGAATTGAAAAATGGAAAGATGGATCAAAGACTATTGCTGATTCGGAAGACTTGCTTGATATTTTAATCTCCCTCAAAGATGGAAACAACAAACCATTATTGACATCAGAGGAAATCAAGGCTCAAGCTCTAGAACTTGTGCTAGGTGGCGTGGACAATCCATCACATGCAGCTGAATTTGCAATAGCAGAAATGATAAATCAGCCAGATTTACTTCAACGAGCCACTGAGGAATTGGATAATGTCGTAGGAAAACAACGACTAGTCCAAGAATCGGATATTCAAAACCTCAACTTTGTGAAAGCTTGTGCAAAAGAAGCTTTTCGTCTTCATCCGATTACAATTTTTAATCCTCCGCATGTTGCTATGGACAACATAATGGTTGCTAATTACATGATTCCAAAAGGTAGCCATGTACTTTTAAGCAAACAAGGACTCGGACGAAATCCAAAAGTTTGGAATGAACCTCACAAGTTTAAACCAGAACGCCATTTAAAAAATGATGGGTCTGTGGTAGTTTTTTTGGAACCAGATTTGAAGTTCATATCATTTAGTACGGGAAGGCGTGGTTGCCCTGGAATTGTGCTTGGAACCACAATGACTGTGATGTTATTAGGTAGGTTGCTCCATGGCTTCAATTGGAGTGGTCCTCCTAATGCATCATCCATTGAACTTCTCAAGTATTTCAATGGTGATAGATACCCTGGAGGGCCACTAGTGGCAATAGCAAAGCCAAGATTGGCAGCAGAATTATATCATCAATAA
Protein sequence

>Msa0459440

MLFQAMSYTSGFLPLLSQSFRHLFLIIFFSFMVIKTIRYHFVENPKKAKLPPGPKPWPIVGNIPEMLANKPATRWIHKIMEELNTEIACIRLGNVHVIPVTCPTIALEFLRKNDATFASRPISMSTDIISKGFLASAVTPFGEQWKKMKKIFVNELFSPHRHQWLANKRNEEADNIMFYVYNKCKNANDNGLVNVRIVTRHYCCNLMRKLVFNTRYFGEGRNDGGPGLEEVEHVDAIFTLLRYVFAFCVSDYMPFLRGLDFDGHERKVKDAMSIVDKYNDTIIDSRIEKWKDGSKTIADSEDLLDILISLKDGNNKPLLTSEEIKAQALELVLGGVDNPSHAAEFAIAEMINQPDLLQRATEELDNVVGKQRLVQESDIQNLNFVKACAKEAFRLHPITIFNPPHVAMDNIMVANYMIPKGSHVLLSKQGLGRNPKVWNEPHKFKPERHLKNDGSVVVFLEPDLKFISFSTGRRGCPGIVLGTTMTVMLLGRLLHGFNWSGPPNASSIELLKYFNGDRYPGGPLVAIAKPRLAAELYHQ*