Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420010 | KEH35119.1 | 81.690 | 284 | 31 | 1 | 1 | 263 | 1 | 284 | 5.79e-164 | 473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420010 | sp|B2XBQ5|85A19_PRUDU | 48.352 | 273 | 120 | 2 | 10 | 261 | 6 | 278 | 3.46e-87 | 270 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420010 | A0A072UZ84 | 81.690 | 284 | 31 | 1 | 1 | 263 | 1 | 284 | 2.77e-164 | 473 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0420010 | Msa0798950 | 0.812738 | 3.644231e-51 | -8.615850e-47 |
| Msa0420010 | Msa1214900 | 0.806215 | 9.167914e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420010 | MtrunA17_Chr3g0118691 | 81.338 | 284 | 32 | 1 | 1 | 263 | 1 | 284 | 4.44e-167 | 471 |
| Msa0420010 | MtrunA17_Chr3g0118701 | 80.282 | 284 | 35 | 1 | 1 | 263 | 1 | 284 | 7.22e-165 | 465 |
| Msa0420010 | MtrunA17_Chr3g0118751 | 75.824 | 273 | 45 | 1 | 12 | 263 | 3 | 275 | 2.23e-151 | 430 |
| Msa0420010 | MtrunA17_Chr3g0118711 | 74.286 | 280 | 51 | 1 | 5 | 263 | 3 | 282 | 1.71e-148 | 424 |
| Msa0420010 | MtrunA17_Chr3g0118771 | 74.552 | 279 | 49 | 3 | 7 | 263 | 12 | 290 | 5.25e-148 | 423 |
| Msa0420010 | MtrunA17_Chr3g0118671 | 68.864 | 273 | 64 | 1 | 12 | 263 | 3 | 275 | 2.18e-138 | 398 |
| Msa0420010 | MtrunA17_Chr3g0118661 | 58.974 | 273 | 91 | 1 | 12 | 263 | 10 | 282 | 4.31e-106 | 316 |
| Msa0420010 | MtrunA17_Chr5g0426431 | 46.212 | 264 | 120 | 2 | 10 | 251 | 7 | 270 | 4.36e-79 | 246 |
| Msa0420010 | MtrunA17_Chr3g0092641 | 46.591 | 264 | 119 | 3 | 10 | 251 | 7 | 270 | 2.61e-77 | 242 |
| Msa0420010 | MtrunA17_Chr3g0078841 | 42.308 | 260 | 127 | 2 | 13 | 249 | 8 | 267 | 1.50e-71 | 227 |
| Msa0420010 | MtrunA17_Chr6g0454341 | 41.065 | 263 | 132 | 2 | 10 | 249 | 5 | 267 | 9.29e-71 | 225 |
| Msa0420010 | MtrunA17_Chr2g0278711 | 41.948 | 267 | 128 | 4 | 12 | 256 | 8 | 269 | 1.16e-70 | 224 |
| Msa0420010 | MtrunA17_Chr6g0454331 | 42.910 | 268 | 125 | 3 | 10 | 249 | 2 | 269 | 2.15e-69 | 221 |
| Msa0420010 | MtrunA17_Chr6g0454301 | 42.586 | 263 | 128 | 2 | 10 | 249 | 258 | 520 | 6.84e-68 | 223 |
| Msa0420010 | MtrunA17_Chr6g0454251 | 40.299 | 268 | 134 | 3 | 10 | 251 | 2 | 269 | 1.46e-67 | 214 |
| Msa0420010 | MtrunA17_Chr6g0454351 | 40.426 | 282 | 140 | 4 | 9 | 264 | 6 | 285 | 3.83e-67 | 215 |
| Msa0420010 | MtrunA17_Chr6g0454321 | 40.076 | 262 | 134 | 2 | 11 | 249 | 6 | 267 | 8.48e-67 | 218 |
| Msa0420010 | MtrunA17_Chr6g0454321 | 46.853 | 143 | 71 | 2 | 3 | 140 | 492 | 634 | 3.15e-34 | 130 |
| Msa0420010 | MtrunA17_Chr6g0454191 | 42.692 | 260 | 122 | 4 | 7 | 239 | 2 | 261 | 2.08e-66 | 214 |
| Msa0420010 | MtrunA17_Chr8g0336331 | 41.445 | 263 | 130 | 4 | 10 | 249 | 5 | 266 | 3.55e-66 | 213 |
| Msa0420010 | MtrunA17_Chr6g0453951 | 40.502 | 279 | 138 | 4 | 12 | 264 | 54 | 330 | 6.49e-66 | 214 |
| Msa0420010 | MtrunA17_Chr6g0454181 | 40.141 | 284 | 142 | 5 | 7 | 264 | 2 | 283 | 6.72e-65 | 210 |
| Msa0420010 | MtrunA17_Chr8g0336271 | 42.500 | 240 | 114 | 4 | 11 | 227 | 6 | 244 | 1.48e-64 | 203 |
| Msa0420010 | MtrunA17_Chr6g0454401 | 41.923 | 260 | 124 | 4 | 7 | 239 | 2 | 261 | 2.08e-63 | 206 |
| Msa0420010 | MtrunA17_Chr4g0050341 | 39.844 | 256 | 131 | 2 | 13 | 245 | 17 | 272 | 1.90e-62 | 204 |
| Msa0420010 | MtrunA17_Chr6g0454361 | 41.367 | 278 | 135 | 4 | 13 | 264 | 9 | 284 | 4.09e-62 | 202 |
| Msa0420010 | MtrunA17_Chr6g0454201 | 42.086 | 278 | 133 | 5 | 13 | 264 | 9 | 284 | 2.50e-61 | 201 |
| Msa0420010 | MtrunA17_Chr6g0454231 | 42.489 | 233 | 111 | 2 | 10 | 219 | 245 | 477 | 3.01e-61 | 200 |
| Msa0420010 | MtrunA17_Chr6g0453961 | 41.245 | 257 | 124 | 4 | 10 | 239 | 14 | 270 | 2.16e-60 | 198 |
| Msa0420010 | MtrunA17_Chr6g0454211 | 42.748 | 262 | 124 | 3 | 4 | 239 | 286 | 547 | 3.02e-60 | 203 |
| Msa0420010 | MtrunA17_Chr6g0454211 | 36.471 | 85 | 54 | 0 | 155 | 239 | 46 | 130 | 1.24e-13 | 70.5 |
| Msa0420010 | MtrunA17_Chr6g0454291 | 43.750 | 256 | 118 | 4 | 10 | 239 | 2 | 257 | 1.30e-59 | 196 |
| Msa0420010 | MtrunA17_Chr6g0454141 | 38.672 | 256 | 131 | 3 | 10 | 239 | 5 | 260 | 9.55e-59 | 194 |
| Msa0420010 | MtrunA17_Chr8g0359821 | 38.583 | 254 | 132 | 2 | 10 | 239 | 5 | 258 | 1.13e-57 | 191 |
| Msa0420010 | MtrunA17_Chr6g0452771 | 40.625 | 256 | 126 | 3 | 10 | 239 | 5 | 260 | 3.54e-57 | 189 |
| Msa0420010 | MtrunA17_Chr7g0217881 | 43.220 | 236 | 126 | 3 | 12 | 239 | 7 | 242 | 5.72e-56 | 186 |
| Msa0420010 | MtrunA17_Chr6g0454151 | 41.509 | 265 | 127 | 6 | 11 | 249 | 6 | 268 | 7.64e-56 | 186 |
| Msa0420010 | MtrunA17_Chr5g0423981 | 41.525 | 236 | 117 | 4 | 10 | 239 | 5 | 225 | 1.25e-55 | 185 |
| Msa0420010 | MtrunA17_Chr6g0454261 | 38.039 | 255 | 132 | 3 | 11 | 239 | 6 | 260 | 2.41e-54 | 182 |
| Msa0420010 | MtrunA17_Chr5g0426411 | 55.556 | 144 | 63 | 1 | 11 | 153 | 8 | 151 | 1.84e-53 | 171 |
| Msa0420010 | MtrunA17_Chr6g0454131 | 38.039 | 255 | 133 | 3 | 10 | 239 | 5 | 259 | 2.37e-51 | 174 |
| Msa0420010 | MtrunA17_Chr6g0454121 | 38.039 | 255 | 133 | 3 | 10 | 239 | 5 | 259 | 1.34e-50 | 172 |
| Msa0420010 | MtrunA17_Chr6g0454281 | 46.073 | 191 | 77 | 3 | 10 | 174 | 5 | 195 | 2.07e-49 | 162 |
| Msa0420010 | MtrunA17_Chr3g0118731 | 80.233 | 86 | 17 | 0 | 67 | 152 | 28 | 113 | 1.61e-45 | 150 |
| Msa0420010 | MtrunA17_Chr3g0118721 | 75.824 | 91 | 22 | 0 | 173 | 263 | 1 | 91 | 7.93e-42 | 145 |
| Msa0420010 | MtrunA17_Chr3g0118741 | 87.719 | 57 | 7 | 0 | 12 | 68 | 3 | 59 | 1.75e-33 | 116 |
| Msa0420010 | MtrunA17_Chr5g0412111 | 31.008 | 258 | 133 | 7 | 12 | 239 | 2 | 244 | 2.50e-30 | 117 |
| Msa0420010 | MtrunA17_Chr5g0412131 | 31.679 | 262 | 132 | 11 | 8 | 239 | 5 | 249 | 2.29e-29 | 115 |
| Msa0420010 | MtrunA17_Chr5g0412101 | 31.061 | 264 | 144 | 10 | 6 | 243 | 3 | 254 | 2.30e-27 | 109 |
| Msa0420010 | MtrunA17_Chr6g0453941 | 30.736 | 231 | 104 | 6 | 11 | 239 | 7 | 183 | 2.54e-27 | 106 |
| Msa0420010 | MtrunA17_Chr6g0464881 | 28.692 | 237 | 150 | 6 | 12 | 239 | 8 | 234 | 8.89e-23 | 96.7 |
| Msa0420010 | MtrunA17_Chr7g0218821 | 30.769 | 247 | 142 | 8 | 14 | 239 | 4 | 242 | 1.38e-22 | 96.3 |
| Msa0420010 | MtrunA17_Chr5g0414331 | 29.412 | 221 | 136 | 5 | 15 | 227 | 13 | 221 | 4.72e-22 | 94.7 |
| Msa0420010 | MtrunA17_Chr5g0414321 | 28.099 | 242 | 147 | 6 | 15 | 248 | 11 | 233 | 5.46e-22 | 94.7 |
| Msa0420010 | MtrunA17_Chr5g0426401 | 41.837 | 98 | 55 | 1 | 156 | 251 | 6 | 103 | 5.75e-22 | 92.8 |
| Msa0420010 | MtrunA17_Chr8g0380531 | 28.205 | 234 | 153 | 5 | 15 | 240 | 10 | 236 | 2.14e-21 | 92.8 |
| Msa0420010 | MtrunA17_Chr7g0218811 | 27.984 | 243 | 143 | 8 | 14 | 239 | 14 | 241 | 2.58e-21 | 92.4 |
| Msa0420010 | MtrunA17_Chr7g0218791 | 26.939 | 245 | 150 | 9 | 14 | 239 | 4 | 238 | 9.27e-21 | 90.9 |
| Msa0420010 | MtrunA17_Chr6g0464871 | 28.235 | 255 | 162 | 6 | 15 | 257 | 23 | 268 | 1.14e-20 | 90.9 |
| Msa0420010 | MtrunA17_Chr7g0218841 | 30.992 | 242 | 130 | 11 | 14 | 239 | 5 | 225 | 1.23e-20 | 90.5 |
| Msa0420010 | MtrunA17_Chr6g0454111 | 44.318 | 88 | 48 | 1 | 153 | 239 | 26 | 113 | 6.52e-20 | 84.7 |
| Msa0420010 | MtrunA17_Chr7g0249981 | 28.390 | 236 | 151 | 6 | 13 | 240 | 23 | 248 | 9.31e-20 | 88.2 |
| Msa0420010 | MtrunA17_Chr7g0250001 | 29.098 | 244 | 143 | 8 | 11 | 240 | 2 | 229 | 1.18e-19 | 87.8 |
| Msa0420010 | MtrunA17_Chr6g0464861 | 29.630 | 243 | 151 | 6 | 7 | 240 | 3 | 234 | 2.66e-19 | 86.7 |
| Msa0420010 | MtrunA17_Chr6g0464841 | 30.085 | 236 | 144 | 7 | 15 | 240 | 11 | 235 | 3.11e-19 | 86.7 |
| Msa0420010 | MtrunA17_Chr7g0218831 | 28.216 | 241 | 137 | 9 | 14 | 239 | 5 | 224 | 9.02e-19 | 85.1 |
| Msa0420010 | MtrunA17_Chr5g0440421 | 27.843 | 255 | 157 | 8 | 10 | 239 | 5 | 257 | 1.28e-18 | 85.1 |
| Msa0420010 | MtrunA17_Chr3g0106231 | 27.059 | 255 | 137 | 8 | 7 | 240 | 10 | 236 | 8.08e-18 | 82.4 |
| Msa0420010 | MtrunA17_Chr6g0464921 | 25.417 | 240 | 156 | 5 | 11 | 239 | 7 | 234 | 3.01e-17 | 80.9 |
| Msa0420010 | MtrunA17_Chr4g0032331 | 28.175 | 252 | 152 | 9 | 11 | 246 | 4 | 242 | 6.31e-17 | 79.7 |
| Msa0420010 | MtrunA17_Chr5g0431361 | 26.749 | 243 | 147 | 8 | 15 | 240 | 12 | 240 | 6.51e-17 | 79.7 |
| Msa0420010 | MtrunA17_Chr3g0112771 | 28.750 | 240 | 137 | 9 | 17 | 239 | 14 | 236 | 8.00e-17 | 79.7 |
| Msa0420010 | MtrunA17_Chr6g0453981 | 34.545 | 110 | 70 | 1 | 155 | 264 | 46 | 153 | 8.72e-16 | 74.3 |
| Msa0420010 | MtrunA17_Chr3g0112761 | 27.615 | 239 | 140 | 8 | 17 | 239 | 10 | 231 | 1.27e-15 | 76.3 |
| Msa0420010 | MtrunA17_Chr8g0365811 | 25.000 | 252 | 156 | 9 | 9 | 239 | 489 | 728 | 1.59e-15 | 76.3 |
| Msa0420010 | MtrunA17_Chr8g0365811 | 23.695 | 249 | 167 | 7 | 9 | 239 | 3 | 246 | 2.32e-13 | 69.7 |
| Msa0420010 | MtrunA17_Chr5g0431441 | 28.049 | 246 | 146 | 10 | 15 | 240 | 18 | 252 | 1.99e-15 | 75.5 |
| Msa0420010 | MtrunA17_Chr8g0355011 | 32.283 | 127 | 65 | 1 | 121 | 226 | 45 | 171 | 5.86e-15 | 73.9 |
| Msa0420010 | MtrunA17_Chr1g0207971 | 26.050 | 238 | 154 | 7 | 15 | 239 | 8 | 236 | 6.26e-15 | 73.9 |
| Msa0420010 | MtrunA17_Chr1g0161351 | 25.101 | 247 | 152 | 9 | 15 | 239 | 37 | 272 | 1.19e-14 | 73.2 |
| Msa0420010 | MtrunA17_Chr7g0249931 | 25.641 | 234 | 156 | 5 | 15 | 239 | 40 | 264 | 1.21e-14 | 73.2 |
| Msa0420010 | MtrunA17_Chr6g0454381 | 35.052 | 97 | 63 | 0 | 155 | 251 | 46 | 142 | 1.80e-14 | 68.9 |
| Msa0420010 | MtrunA17_Chr1g0207861 | 23.673 | 245 | 168 | 6 | 10 | 239 | 3 | 243 | 5.21e-14 | 71.2 |
| Msa0420010 | MtrunA17_Chr1g0207831 | 25.498 | 251 | 145 | 9 | 17 | 240 | 10 | 245 | 6.49e-14 | 71.2 |
| Msa0420010 | MtrunA17_Chr1g0207911 | 24.797 | 246 | 153 | 8 | 17 | 240 | 10 | 245 | 1.00e-13 | 69.3 |
| Msa0420010 | MtrunA17_Chr1g0207981 | 27.509 | 269 | 157 | 10 | 6 | 246 | 2 | 260 | 1.56e-13 | 70.1 |
| Msa0420010 | MtrunA17_Chr5g0393591 | 27.572 | 243 | 145 | 8 | 15 | 236 | 17 | 249 | 2.00e-13 | 69.7 |
| Msa0420010 | MtrunA17_Chr3g0121991 | 24.900 | 249 | 154 | 9 | 12 | 239 | 76 | 312 | 7.87e-13 | 67.8 |
| Msa0420010 | MtrunA17_Chr8g0374931 | 26.667 | 255 | 163 | 10 | 12 | 250 | 7 | 253 | 1.45e-12 | 67.0 |
| Msa0420010 | MtrunA17_Chr3g0098111 | 23.577 | 246 | 157 | 8 | 15 | 239 | 9 | 244 | 1.89e-12 | 66.6 |
| Msa0420010 | MtrunA17_Chr3g0122001 | 25.681 | 257 | 154 | 10 | 6 | 239 | 477 | 719 | 7.41e-12 | 65.5 |
| Msa0420010 | MtrunA17_Chr6g0464091 | 27.203 | 261 | 158 | 9 | 15 | 252 | 18 | 269 | 1.26e-11 | 64.3 |
| Msa0420010 | MtrunA17_Chr3g0106241 | 32.258 | 155 | 88 | 6 | 7 | 159 | 10 | 149 | 1.74e-11 | 61.6 |
| Msa0420010 | MtrunA17_Chr8g0366391 | 27.341 | 267 | 159 | 10 | 10 | 250 | 3 | 260 | 1.91e-11 | 63.9 |
| Msa0420010 | MtrunA17_Chr4g0044481 | 24.806 | 258 | 142 | 8 | 15 | 252 | 27 | 252 | 4.48e-11 | 62.4 |
| Msa0420010 | MtrunA17_Chr7g0243681 | 26.374 | 273 | 160 | 12 | 7 | 252 | 3 | 261 | 4.49e-11 | 62.8 |
| Msa0420010 | MtrunA17_Chr4g0011051 | 28.016 | 257 | 156 | 10 | 13 | 246 | 7 | 257 | 7.78e-11 | 62.0 |
| Msa0420010 | MtrunA17_Chr7g0243921 | 28.358 | 201 | 121 | 7 | 1 | 186 | 28 | 220 | 7.94e-11 | 60.8 |
| Msa0420010 | MtrunA17_Chr7g0265101 | 25.000 | 260 | 167 | 7 | 13 | 250 | 7 | 260 | 9.42e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420010 | AT1G22360.2 | 44.765 | 277 | 132 | 2 | 9 | 264 | 4 | 280 | 3.89e-84 | 259 |
| Msa0420010 | AT1G22360.1 | 45.255 | 274 | 129 | 2 | 9 | 261 | 4 | 277 | 4.88e-84 | 259 |
| Msa0420010 | AT1G22370.2 | 46.512 | 258 | 121 | 3 | 12 | 252 | 10 | 267 | 1.80e-82 | 255 |
| Msa0420010 | AT1G22380.1 | 44.727 | 275 | 131 | 2 | 11 | 264 | 9 | 283 | 5.53e-80 | 249 |
| Msa0420010 | AT1G22340.1 | 44.788 | 259 | 122 | 2 | 9 | 246 | 7 | 265 | 2.74e-79 | 247 |
| Msa0420010 | AT1G22400.1 | 44.322 | 273 | 128 | 4 | 9 | 257 | 7 | 279 | 4.01e-78 | 244 |
| Msa0420010 | AT1G78270.1 | 41.455 | 275 | 141 | 2 | 10 | 264 | 8 | 282 | 4.75e-69 | 221 |
| Msa0420010 | AT2G36970.1 | 29.134 | 254 | 151 | 8 | 12 | 239 | 7 | 257 | 8.76e-27 | 108 |
| Msa0420010 | AT2G28080.1 | 29.461 | 241 | 145 | 6 | 19 | 239 | 22 | 257 | 4.73e-24 | 100 |
| Msa0420010 | AT3G02100.1 | 29.880 | 251 | 143 | 10 | 13 | 239 | 11 | 252 | 7.93e-24 | 100 |
| Msa0420010 | AT3G21560.1 | 28.511 | 235 | 140 | 6 | 14 | 227 | 11 | 238 | 5.50e-22 | 95.1 |
| Msa0420010 | AT3G46650.1 | 31.224 | 237 | 139 | 9 | 11 | 242 | 6 | 223 | 2.63e-21 | 92.8 |
| Msa0420010 | AT3G46670.1 | 31.298 | 262 | 130 | 12 | 11 | 244 | 2 | 241 | 3.25e-20 | 89.7 |
| Msa0420010 | AT5G38010.1 | 28.682 | 258 | 151 | 8 | 11 | 248 | 6 | 250 | 3.28e-20 | 89.7 |
| Msa0420010 | AT3G46660.1 | 32.046 | 259 | 134 | 11 | 11 | 244 | 7 | 248 | 3.79e-20 | 89.7 |
| Msa0420010 | AT5G59590.1 | 31.707 | 246 | 125 | 9 | 17 | 239 | 12 | 237 | 2.19e-19 | 87.4 |
| Msa0420010 | AT5G59580.1 | 32.258 | 248 | 128 | 10 | 13 | 239 | 7 | 235 | 7.25e-19 | 85.9 |
| Msa0420010 | AT1G22370.1 | 40.000 | 95 | 56 | 1 | 159 | 252 | 3 | 97 | 8.77e-19 | 84.3 |
| Msa0420010 | AT5G38040.1 | 29.289 | 239 | 136 | 8 | 23 | 243 | 18 | 241 | 1.17e-18 | 85.5 |
| Msa0420010 | AT2G43820.1 | 25.847 | 236 | 156 | 6 | 11 | 240 | 3 | 225 | 1.31e-18 | 85.1 |
| Msa0420010 | AT3G46690.1 | 29.388 | 245 | 142 | 9 | 12 | 239 | 6 | 236 | 4.63e-17 | 80.9 |
| Msa0420010 | AT2G43840.2 | 24.576 | 236 | 159 | 6 | 11 | 240 | 3 | 225 | 7.24e-17 | 80.1 |
| Msa0420010 | AT3G46680.1 | 29.839 | 248 | 140 | 11 | 11 | 239 | 5 | 237 | 8.59e-17 | 79.7 |
| Msa0420010 | AT2G43840.1 | 24.576 | 236 | 159 | 6 | 11 | 240 | 3 | 225 | 1.42e-16 | 79.3 |
| Msa0420010 | AT3G11340.1 | 27.273 | 242 | 148 | 8 | 11 | 239 | 5 | 231 | 1.48e-16 | 79.3 |
| Msa0420010 | AT4G15490.1 | 29.084 | 251 | 141 | 11 | 15 | 239 | 8 | 247 | 8.13e-16 | 77.0 |
| Msa0420010 | AT2G30140.2 | 27.059 | 255 | 155 | 10 | 1 | 239 | 1 | 240 | 2.43e-15 | 75.5 |
| Msa0420010 | AT2G30140.1 | 26.953 | 256 | 155 | 10 | 1 | 239 | 1 | 241 | 2.45e-15 | 75.5 |
| Msa0420010 | AT4G15480.1 | 25.301 | 249 | 161 | 7 | 15 | 245 | 19 | 260 | 1.62e-14 | 73.2 |
| Msa0420010 | AT3G46700.1 | 26.939 | 245 | 143 | 8 | 12 | 239 | 6 | 231 | 2.58e-14 | 72.8 |
| Msa0420010 | AT4G15500.1 | 27.823 | 248 | 145 | 11 | 14 | 239 | 8 | 243 | 4.32e-14 | 72.0 |
| Msa0420010 | AT2G30150.2 | 28.049 | 246 | 140 | 10 | 15 | 239 | 13 | 242 | 6.45e-14 | 71.6 |
| Msa0420010 | AT4G34131.1 | 26.838 | 272 | 164 | 9 | 5 | 250 | 2 | 264 | 9.21e-14 | 71.2 |
| Msa0420010 | AT5G05880.1 | 26.122 | 245 | 148 | 8 | 15 | 241 | 8 | 237 | 7.83e-13 | 68.2 |
| Msa0420010 | AT3G46720.1 | 31.034 | 145 | 84 | 3 | 12 | 153 | 6 | 137 | 9.38e-13 | 68.2 |
| Msa0420010 | AT5G17040.1 | 27.027 | 185 | 118 | 5 | 70 | 243 | 56 | 234 | 1.21e-12 | 67.8 |
| Msa0420010 | AT4G34135.2 | 25.368 | 272 | 166 | 9 | 7 | 250 | 3 | 265 | 1.23e-12 | 67.4 |
| Msa0420010 | AT2G30150.1 | 27.686 | 242 | 138 | 10 | 19 | 239 | 1 | 226 | 1.90e-12 | 67.0 |
| Msa0420010 | AT5G05890.1 | 26.336 | 262 | 157 | 9 | 15 | 256 | 8 | 253 | 2.06e-12 | 67.0 |
| Msa0420010 | AT4G34135.1 | 25.926 | 270 | 167 | 9 | 7 | 250 | 3 | 265 | 2.55e-12 | 66.6 |
| Msa0420010 | AT4G15550.1 | 26.792 | 265 | 155 | 13 | 14 | 250 | 12 | 265 | 2.66e-12 | 66.6 |
| Msa0420010 | AT5G05900.1 | 25.101 | 247 | 152 | 7 | 16 | 241 | 9 | 243 | 4.38e-12 | 65.9 |
| Msa0420010 | AT2G31750.1 | 26.271 | 236 | 159 | 7 | 11 | 239 | 4 | 231 | 5.13e-12 | 65.9 |
| Msa0420010 | AT2G31750.2 | 25.514 | 243 | 152 | 7 | 11 | 239 | 4 | 231 | 8.51e-12 | 65.1 |
| Msa0420010 | AT5G17050.1 | 24.000 | 250 | 161 | 8 | 15 | 243 | 12 | 253 | 1.10e-11 | 64.7 |
| Msa0420010 | AT3G55710.1 | 27.311 | 238 | 148 | 9 | 17 | 239 | 10 | 237 | 1.18e-11 | 64.7 |
| Msa0420010 | AT5G37950.2 | 27.391 | 230 | 142 | 6 | 30 | 248 | 1 | 216 | 2.67e-11 | 63.5 |
| Msa0420010 | AT1G10400.1 | 25.794 | 252 | 156 | 8 | 12 | 239 | 4 | 248 | 4.82e-11 | 62.8 |
Find 69 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTAAAATGGTTGAGTAAA+TGG | 0.197658 | 3_2:-68273747 | Msa0420010:three_prime_UTR |
| TAGCTTCGCCGTTGACAATT+TGG | 0.245361 | 3_2:+68273385 | None:intergenic |
| GTTGCATCTTTATCTGATTC+TGG | 0.253266 | 3_2:+68275029 | None:intergenic |
| CTGGTATGCCTACTATTTGT+TGG | 0.291717 | 3_2:-68273429 | Msa0420010:three_prime_UTR |
| GCTATATATGTTTGGGTTGT+TGG | 0.297676 | 3_2:+68273865 | None:intergenic |
| CATTAACACGTTCGAAGAAT+TGG | 0.298616 | 3_2:-68273915 | Msa0420010:CDS |
| ACCTTTGCAACGAAAGAGTT+TGG | 0.313608 | 3_2:+68275169 | None:intergenic |
| GGGCCAATGCTATATATGTT+TGG | 0.325630 | 3_2:+68273857 | None:intergenic |
| TGCTTTCTCATCCATCAGTT+GGG | 0.344041 | 3_2:-68273501 | Msa0420010:three_prime_UTR |
| ACACTTGAAACAATTTCTTC+TGG | 0.346235 | 3_2:-68273448 | Msa0420010:three_prime_UTR |
| GCATTCAAGAGCTAATGTTT+TGG | 0.359529 | 3_2:-68274845 | Msa0420010:CDS |
| GGCCAATGCTATATATGTTT+GGG | 0.361324 | 3_2:+68273858 | None:intergenic |
| GGAAGAGTAGCAAAAGATTT+AGG | 0.366898 | 3_2:-68274867 | Msa0420010:CDS |
| TCAGTACTATATATTAATTA+TGG | 0.370543 | 3_2:-68273715 | Msa0420010:three_prime_UTR |
| ATGACCCAGAATGTGTAAAA+TGG | 0.381120 | 3_2:-68273759 | Msa0420010:exon |
| ATCATCTGAAAGAATTTGCT+TGG | 0.389361 | 3_2:-68273669 | Msa0420010:three_prime_UTR |
| TCAGCAACTATGCAAGTAAC+TGG | 0.394555 | 3_2:+68274909 | None:intergenic |
| TCATCTGAAAGAATTTGCTT+GGG | 0.418021 | 3_2:-68273668 | Msa0420010:three_prime_UTR |
| CTAGATGAAGTTAAGGATAG+AGG | 0.430340 | 3_2:-68273556 | Msa0420010:three_prime_UTR |
| GATTCTTGACTCATTGTGGT+TGG | 0.432328 | 3_2:-68273477 | Msa0420010:three_prime_UTR |
| TGTTGGCCCTAAGGGTATCA+AGG | 0.436616 | 3_2:+68273882 | None:intergenic |
| TCTTCACCCATTGCTACATC+TGG | 0.440690 | 3_2:+68273604 | None:intergenic |
| TCTGATTCTGGTAAACCATC+AGG | 0.441558 | 3_2:+68275041 | None:intergenic |
| TGTAAAATGGTTGAGTAAAT+GGG | 0.441595 | 3_2:-68273746 | Msa0420010:three_prime_UTR |
| GTGCTTTCTCATCCATCAGT+TGG | 0.443478 | 3_2:-68273502 | Msa0420010:three_prime_UTR |
| TGTTTGGGTTGTTGGCCCTA+AGG | 0.446057 | 3_2:+68273873 | None:intergenic |
| GTTTGGGTTGTTGGCCCTAA+GGG | 0.446250 | 3_2:+68273874 | None:intergenic |
| GTGAAACCCTTGATACCCTT+AGG | 0.448960 | 3_2:-68273889 | Msa0420010:CDS |
| ACAAGTCTAGATTGGATCTC+AGG | 0.451630 | 3_2:-68274058 | Msa0420010:CDS |
| AGAGTTTCTAGATGAAGTTA+AGG | 0.478392 | 3_2:-68273563 | Msa0420010:three_prime_UTR |
| AAACGTTTGATAAAGTCTCT+TGG | 0.482925 | 3_2:-68275110 | Msa0420010:CDS |
| GGTTGTTGCTCAGCAAAGAA+AGG | 0.485465 | 3_2:+68273406 | None:intergenic |
| CCTTGGATACAAGTCTAGAT+TGG | 0.486139 | 3_2:-68274066 | Msa0420010:CDS |
| ACATGACCCTGTGCTGGAAA+TGG | 0.488947 | 3_2:+68275212 | None:intergenic |
| GAGACTTTATCAAACGTTTG+TGG | 0.490628 | 3_2:+68275114 | None:intergenic |
| AAGAAAGGCCAACAAATAGT+AGG | 0.494046 | 3_2:+68273421 | None:intergenic |
| AGTTTGGCAAGTTGCATGAA+AGG | 0.495243 | 3_2:+68275185 | None:intergenic |
| GCCAAACTCTTTCGTTGCAA+AGG | 0.497840 | 3_2:-68275170 | Msa0420010:CDS |
| TCTTGGAGCTGACTTTGTCA+AGG | 0.498520 | 3_2:-68275093 | Msa0420010:CDS |
| ATTTGTACCATTTCCAGCAC+AGG | 0.502301 | 3_2:-68275219 | Msa0420010:CDS |
| CTTTGAAAGAGCTTGTGAAA+AGG | 0.502820 | 3_2:-68274956 | Msa0420010:CDS |
| GTTACTTGCATAGTTGCTGA+TGG | 0.514102 | 3_2:-68274906 | Msa0420010:CDS |
| GTTGGCCCTAAGGGTATCAA+GGG | 0.515534 | 3_2:+68273883 | None:intergenic |
| GGGTTCACATGACCCTGTGC+TGG | 0.518569 | 3_2:+68275206 | None:intergenic |
| GTTTGGCAAGTTGCATGAAA+GGG | 0.520091 | 3_2:+68275186 | None:intergenic |
| TCTGTGATTCTCATGAAGCT+TGG | 0.520553 | 3_2:+68274007 | None:intergenic |
| CTTGGAGCTGACTTTGTCAA+GGG | 0.528635 | 3_2:-68275092 | Msa0420010:CDS |
| TTCTGGTAAACCATCAGGTA+TGG | 0.543800 | 3_2:+68275046 | None:intergenic |
| ATAGAGGATACATAACTAGT+TGG | 0.545228 | 3_2:-68273540 | Msa0420010:three_prime_UTR |
| GTGAGACCAGATGTAGCAAT+GGG | 0.552354 | 3_2:-68273610 | Msa0420010:three_prime_UTR |
| GCTTTCTCATCCATCAGTTG+GGG | 0.558660 | 3_2:-68273500 | Msa0420010:three_prime_UTR |
| AACCCAAACATATATAGCAT+TGG | 0.559847 | 3_2:-68273860 | Msa0420010:CDS |
| TGAAACCCTTGATACCCTTA+GGG | 0.560282 | 3_2:-68273888 | Msa0420010:CDS |
| CTACTTGCTTCACACAACGT+TGG | 0.565874 | 3_2:+68274996 | None:intergenic |
| CAGTTTGAGACCATACCTGA+TGG | 0.567679 | 3_2:-68275056 | Msa0420010:CDS |
| CTCTACCAAGCATTTGACTC+GGG | 0.577514 | 3_2:+68273837 | None:intergenic |
| CTTTCTCATCCATCAGTTGG+GGG | 0.578403 | 3_2:-68273499 | Msa0420010:three_prime_UTR |
| CCAATCTAGACTTGTATCCA+AGG | 0.579158 | 3_2:+68274066 | None:intergenic |
| TTAATATATAGTACTGAGCA+AGG | 0.597770 | 3_2:+68273721 | None:intergenic |
| AGTGAGACCAGATGTAGCAA+TGG | 0.599381 | 3_2:-68273611 | Msa0420010:three_prime_UTR |
| TCTCTACCAAGCATTTGACT+CGG | 0.610662 | 3_2:+68273836 | None:intergenic |
| TTTGTACCATTTCCAGCACA+GGG | 0.612993 | 3_2:-68275218 | Msa0420010:CDS |
| CATCTGAAAGAATTTGCTTG+GGG | 0.613452 | 3_2:-68273667 | Msa0420010:three_prime_UTR |
| ATTGGCCCGAGTCAAATGCT+TGG | 0.616050 | 3_2:-68273842 | Msa0420010:CDS |
| AACACGTTCGAAGAATTGGA+AGG | 0.626637 | 3_2:-68273911 | Msa0420010:CDS |
| ATGCAAGTAACTGGAATATG+TGG | 0.627997 | 3_2:+68274918 | None:intergenic |
| ACTTCATCTAGAAACTCTTG+TGG | 0.641007 | 3_2:+68273568 | None:intergenic |
| AATGGTACAAATACAGCATG+CGG | 0.651874 | 3_2:+68275230 | None:intergenic |
| GTTGAATTCAGTGTTCACAA+AGG | 0.652579 | 3_2:+68275136 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAGATACAATAATATT+TGG | + | chr3_2:68274133-68274152 | None:intergenic | 15.0% |
| !! | ATAATTTAATATATATGCAG+TGG | - | chr3_2:68274191-68274210 | Msa0420010:intron | 15.0% |
| !!! | AATCTGAAATTAAAATACAT+AGG | - | chr3_2:68274312-68274331 | Msa0420010:intron | 15.0% |
| !! | TTTCAAAATATATCACATAA+AGG | + | chr3_2:68274411-68274430 | None:intergenic | 15.0% |
| !!! | GATATATTTTGAAATTCTTT+CGG | - | chr3_2:68274417-68274436 | Msa0420010:intron | 15.0% |
| !! | TTTCACAATATAAATTTGAA+TGG | + | chr3_2:68274521-68274540 | None:intergenic | 15.0% |
| !! | TCAGTACTATATATTAATTA+TGG | - | chr3_2:68274953-68274972 | Msa0420010:CDS | 15.0% |
| !!! | ATAGTAAATTACCTTTTTTA+TGG | - | chr3_2:68275032-68275051 | Msa0420010:CDS | 15.0% |
| !! | AAACAAGATACAATAATATT+TGG | + | chr3_2:68274133-68274152 | None:intergenic | 15.0% |
| !! | ATAATTTAATATATATGCAG+TGG | - | chr3_2:68274191-68274210 | Msa0420010:intron | 15.0% |
| !!! | AATCTGAAATTAAAATACAT+AGG | - | chr3_2:68274312-68274331 | Msa0420010:intron | 15.0% |
| !! | TTTCAAAATATATCACATAA+AGG | + | chr3_2:68274411-68274430 | None:intergenic | 15.0% |
| !!! | GATATATTTTGAAATTCTTT+CGG | - | chr3_2:68274417-68274436 | Msa0420010:intron | 15.0% |
| !! | TTTCACAATATAAATTTGAA+TGG | + | chr3_2:68274521-68274540 | None:intergenic | 15.0% |
| !! | TCAGTACTATATATTAATTA+TGG | - | chr3_2:68274953-68274972 | Msa0420010:CDS | 15.0% |
| !!! | ATAGTAAATTACCTTTTTTA+TGG | - | chr3_2:68275032-68275051 | Msa0420010:CDS | 15.0% |
| !!! | TTTTTGGGATATTTACAATA+CGG | - | chr3_2:68273864-68273883 | Msa0420010:CDS | 20.0% |
| !!! | TGATGTTTTGTTTAATTTTG+CGG | - | chr3_2:68274690-68274709 | Msa0420010:intron | 20.0% |
| !!! | TTTTTGGGATATTTACAATA+CGG | - | chr3_2:68273864-68273883 | Msa0420010:CDS | 20.0% |
| !!! | TGATGTTTTGTTTAATTTTG+CGG | - | chr3_2:68274690-68274709 | Msa0420010:intron | 20.0% |
| !! | TAGTTTAACTTACCTTTGAA+GGG | + | chr3_2:68273915-68273934 | None:intergenic | 25.0% |
| ! | ATATATATGAGATGTGTCAA+AGG | + | chr3_2:68274032-68274051 | None:intergenic | 25.0% |
| ! | GCTAAAAATGATGTAATCAT+TGG | + | chr3_2:68274089-68274108 | None:intergenic | 25.0% |
| !!! | TAAGATTAAAGTGGGTTAAA+GGG | + | chr3_2:68274551-68274570 | None:intergenic | 25.0% |
| !!! | ATAAGATTAAAGTGGGTTAA+AGG | + | chr3_2:68274552-68274571 | None:intergenic | 25.0% |
| ! | TCTACGAATAAGATTAAAGT+GGG | + | chr3_2:68274559-68274578 | None:intergenic | 25.0% |
| ! | ATCTACGAATAAGATTAAAG+TGG | + | chr3_2:68274560-68274579 | None:intergenic | 25.0% |
| !! | GATGAAACTTTTATTGATGA+TGG | - | chr3_2:68274577-68274596 | Msa0420010:intron | 25.0% |
| ! | TGTAAAATGGTTGAGTAAAT+GGG | - | chr3_2:68274922-68274941 | Msa0420010:CDS | 25.0% |
| !! | TTAATATATAGTACTGAGCA+AGG | + | chr3_2:68274950-68274969 | None:intergenic | 25.0% |
| !! | TAGTTTAACTTACCTTTGAA+GGG | + | chr3_2:68273915-68273934 | None:intergenic | 25.0% |
| ! | ATATATATGAGATGTGTCAA+AGG | + | chr3_2:68274032-68274051 | None:intergenic | 25.0% |
| ! | GCTAAAAATGATGTAATCAT+TGG | + | chr3_2:68274089-68274108 | None:intergenic | 25.0% |
| !!! | TAAGATTAAAGTGGGTTAAA+GGG | + | chr3_2:68274551-68274570 | None:intergenic | 25.0% |
| !!! | ATAAGATTAAAGTGGGTTAA+AGG | + | chr3_2:68274552-68274571 | None:intergenic | 25.0% |
| ! | TCTACGAATAAGATTAAAGT+GGG | + | chr3_2:68274559-68274578 | None:intergenic | 25.0% |
| ! | ATCTACGAATAAGATTAAAG+TGG | + | chr3_2:68274560-68274579 | None:intergenic | 25.0% |
| !! | GATGAAACTTTTATTGATGA+TGG | - | chr3_2:68274577-68274596 | Msa0420010:intron | 25.0% |
| ! | TGTAAAATGGTTGAGTAAAT+GGG | - | chr3_2:68274922-68274941 | Msa0420010:CDS | 25.0% |
| !! | TTAATATATAGTACTGAGCA+AGG | + | chr3_2:68274950-68274969 | None:intergenic | 25.0% |
| AAACGTTTGATAAAGTCTCT+TGG | - | chr3_2:68273558-68273577 | Msa0420010:three_prime_UTR | 30.0% | |
| !!! | ATAGTTGCTGATGGTTTTTT+GGG | - | chr3_2:68273771-68273790 | Msa0420010:exon | 30.0% |
| ! | CTAGTTTAACTTACCTTTGA+AGG | + | chr3_2:68273916-68273935 | None:intergenic | 30.0% |
| ATATGCAGAAAACAATCAGA+AGG | + | chr3_2:68273947-68273966 | None:intergenic | 30.0% | |
| TTCTGCATATATATGAAGCA+CGG | - | chr3_2:68273957-68273976 | Msa0420010:CDS | 30.0% | |
| ACTGCTAATGTACAAAACAA+AGG | + | chr3_2:68274220-68274239 | None:intergenic | 30.0% | |
| ! | CTTGTCTTTTGTATTGTATG+AGG | + | chr3_2:68274359-68274378 | None:intergenic | 30.0% |
| ! | TCTCAAACAATTTTGTGTCT+CGG | + | chr3_2:68274719-68274738 | None:intergenic | 30.0% |
| AACCCAAACATATATAGCAT+TGG | - | chr3_2:68274808-68274827 | Msa0420010:intron | 30.0% | |
| ! | GATTTTCCTGAGAAAGAAAA+TGG | - | chr3_2:68274853-68274872 | Msa0420010:CDS | 30.0% |
| ! | GTAAAACCATTTTCTTTCTC+AGG | + | chr3_2:68274862-68274881 | None:intergenic | 30.0% |
| !! | GAAAATGGTTTTACAACAAG+TGG | - | chr3_2:68274868-68274887 | Msa0420010:CDS | 30.0% |
| !!! | AACAAGTGGTTCAAGTTTTT+TGG | - | chr3_2:68274882-68274901 | Msa0420010:CDS | 30.0% |
| ! | TCAACCATTTTACACATTCT+GGG | + | chr3_2:68274916-68274935 | None:intergenic | 30.0% |
| GTGTAAAATGGTTGAGTAAA+TGG | - | chr3_2:68274921-68274940 | Msa0420010:CDS | 30.0% | |
| ! | ATCATCTGAAAGAATTTGCT+TGG | - | chr3_2:68274999-68275018 | Msa0420010:CDS | 30.0% |
| ! | TCATCTGAAAGAATTTGCTT+GGG | - | chr3_2:68275000-68275019 | Msa0420010:CDS | 30.0% |
| ! | AGAGTTTCTAGATGAAGTTA+AGG | - | chr3_2:68275105-68275124 | Msa0420010:CDS | 30.0% |
| ATAGAGGATACATAACTAGT+TGG | - | chr3_2:68275128-68275147 | Msa0420010:CDS | 30.0% | |
| ACACTTGAAACAATTTCTTC+TGG | - | chr3_2:68275220-68275239 | Msa0420010:CDS | 30.0% | |
| AAACGTTTGATAAAGTCTCT+TGG | - | chr3_2:68273558-68273577 | Msa0420010:three_prime_UTR | 30.0% | |
| !!! | ATAGTTGCTGATGGTTTTTT+GGG | - | chr3_2:68273771-68273790 | Msa0420010:exon | 30.0% |
| ! | CTAGTTTAACTTACCTTTGA+AGG | + | chr3_2:68273916-68273935 | None:intergenic | 30.0% |
| ATATGCAGAAAACAATCAGA+AGG | + | chr3_2:68273947-68273966 | None:intergenic | 30.0% | |
| TTCTGCATATATATGAAGCA+CGG | - | chr3_2:68273957-68273976 | Msa0420010:CDS | 30.0% | |
| ACTGCTAATGTACAAAACAA+AGG | + | chr3_2:68274220-68274239 | None:intergenic | 30.0% | |
| ! | CTTGTCTTTTGTATTGTATG+AGG | + | chr3_2:68274359-68274378 | None:intergenic | 30.0% |
| ! | TCTCAAACAATTTTGTGTCT+CGG | + | chr3_2:68274719-68274738 | None:intergenic | 30.0% |
| AACCCAAACATATATAGCAT+TGG | - | chr3_2:68274808-68274827 | Msa0420010:intron | 30.0% | |
| ! | GATTTTCCTGAGAAAGAAAA+TGG | - | chr3_2:68274853-68274872 | Msa0420010:CDS | 30.0% |
| ! | GTAAAACCATTTTCTTTCTC+AGG | + | chr3_2:68274862-68274881 | None:intergenic | 30.0% |
| !! | GAAAATGGTTTTACAACAAG+TGG | - | chr3_2:68274868-68274887 | Msa0420010:CDS | 30.0% |
| !!! | AACAAGTGGTTCAAGTTTTT+TGG | - | chr3_2:68274882-68274901 | Msa0420010:CDS | 30.0% |
| ! | TCAACCATTTTACACATTCT+GGG | + | chr3_2:68274916-68274935 | None:intergenic | 30.0% |
| GTGTAAAATGGTTGAGTAAA+TGG | - | chr3_2:68274921-68274940 | Msa0420010:CDS | 30.0% | |
| ! | ATCATCTGAAAGAATTTGCT+TGG | - | chr3_2:68274999-68275018 | Msa0420010:CDS | 30.0% |
| ! | TCATCTGAAAGAATTTGCTT+GGG | - | chr3_2:68275000-68275019 | Msa0420010:CDS | 30.0% |
| ! | AGAGTTTCTAGATGAAGTTA+AGG | - | chr3_2:68275105-68275124 | Msa0420010:CDS | 30.0% |
| ATAGAGGATACATAACTAGT+TGG | - | chr3_2:68275128-68275147 | Msa0420010:CDS | 30.0% | |
| ACACTTGAAACAATTTCTTC+TGG | - | chr3_2:68275220-68275239 | Msa0420010:CDS | 30.0% | |
| AATGGTACAAATACAGCATG+CGG | + | chr3_2:68273441-68273460 | None:intergenic | 35.0% | |
| GTTGAATTCAGTGTTCACAA+AGG | + | chr3_2:68273535-68273554 | None:intergenic | 35.0% | |
| GAGACTTTATCAAACGTTTG+TGG | + | chr3_2:68273557-68273576 | None:intergenic | 35.0% | |
| GTTGCATCTTTATCTGATTC+TGG | + | chr3_2:68273642-68273661 | None:intergenic | 35.0% | |
| ! | CTTTTCACAAGCTCTTTCAA+AGG | + | chr3_2:68273714-68273733 | None:intergenic | 35.0% |
| ! | CTTTGAAAGAGCTTGTGAAA+AGG | - | chr3_2:68273712-68273731 | Msa0420010:three_prime_UTR | 35.0% |
| ATGCAAGTAACTGGAATATG+TGG | + | chr3_2:68273753-68273772 | None:intergenic | 35.0% | |
| !!! | CATAGTTGCTGATGGTTTTT+TGG | - | chr3_2:68273770-68273789 | Msa0420010:exon | 35.0% |
| GGAAGAGTAGCAAAAGATTT+AGG | - | chr3_2:68273801-68273820 | Msa0420010:CDS | 35.0% | |
| ! | GCATTCAAGAGCTAATGTTT+TGG | - | chr3_2:68273823-68273842 | Msa0420010:CDS | 35.0% |
| AGGAGAATTATTCCCTTCAA+AGG | - | chr3_2:68273900-68273919 | Msa0420010:CDS | 35.0% | |
| !! | AAGGAGTGTCATACAAGTTT+CGG | + | chr3_2:68274013-68274032 | None:intergenic | 35.0% |
| !!! | TTTTATTGATGATGGCACCT+TGG | - | chr3_2:68274585-68274604 | Msa0420010:intron | 35.0% |
| CATTAACACGTTCGAAGAAT+TGG | - | chr3_2:68274753-68274772 | Msa0420010:intron | 35.0% | |
| !! | GCTATATATGTTTGGGTTGT+TGG | + | chr3_2:68274806-68274825 | None:intergenic | 35.0% |
| GGCCAATGCTATATATGTTT+GGG | + | chr3_2:68274813-68274832 | None:intergenic | 35.0% | |
| ATGACCCAGAATGTGTAAAA+TGG | - | chr3_2:68274909-68274928 | Msa0420010:CDS | 35.0% | |
| ! | CTCAACCATTTTACACATTC+TGG | + | chr3_2:68274917-68274936 | None:intergenic | 35.0% |
| ! | CATCTGAAAGAATTTGCTTG+GGG | - | chr3_2:68275001-68275020 | Msa0420010:CDS | 35.0% |
| GGTCTCACTATCCATAAAAA+AGG | + | chr3_2:68275046-68275065 | None:intergenic | 35.0% | |
| ACTTCATCTAGAAACTCTTG+TGG | + | chr3_2:68275103-68275122 | None:intergenic | 35.0% | |
| CTAGATGAAGTTAAGGATAG+AGG | - | chr3_2:68275112-68275131 | Msa0420010:CDS | 35.0% | |
| AAGAAAGGCCAACAAATAGT+AGG | + | chr3_2:68275250-68275269 | None:intergenic | 35.0% | |
| AATGGTACAAATACAGCATG+CGG | + | chr3_2:68273441-68273460 | None:intergenic | 35.0% | |
| GTTGAATTCAGTGTTCACAA+AGG | + | chr3_2:68273535-68273554 | None:intergenic | 35.0% | |
| GAGACTTTATCAAACGTTTG+TGG | + | chr3_2:68273557-68273576 | None:intergenic | 35.0% | |
| GTTGCATCTTTATCTGATTC+TGG | + | chr3_2:68273642-68273661 | None:intergenic | 35.0% | |
| ! | CTTTTCACAAGCTCTTTCAA+AGG | + | chr3_2:68273714-68273733 | None:intergenic | 35.0% |
| ! | CTTTGAAAGAGCTTGTGAAA+AGG | - | chr3_2:68273712-68273731 | Msa0420010:three_prime_UTR | 35.0% |
| ATGCAAGTAACTGGAATATG+TGG | + | chr3_2:68273753-68273772 | None:intergenic | 35.0% | |
| !!! | CATAGTTGCTGATGGTTTTT+TGG | - | chr3_2:68273770-68273789 | Msa0420010:exon | 35.0% |
| GGAAGAGTAGCAAAAGATTT+AGG | - | chr3_2:68273801-68273820 | Msa0420010:CDS | 35.0% | |
| ! | GCATTCAAGAGCTAATGTTT+TGG | - | chr3_2:68273823-68273842 | Msa0420010:CDS | 35.0% |
| AGGAGAATTATTCCCTTCAA+AGG | - | chr3_2:68273900-68273919 | Msa0420010:CDS | 35.0% | |
| !! | AAGGAGTGTCATACAAGTTT+CGG | + | chr3_2:68274013-68274032 | None:intergenic | 35.0% |
| !!! | TTTTATTGATGATGGCACCT+TGG | - | chr3_2:68274585-68274604 | Msa0420010:intron | 35.0% |
| CATTAACACGTTCGAAGAAT+TGG | - | chr3_2:68274753-68274772 | Msa0420010:intron | 35.0% | |
| !! | GCTATATATGTTTGGGTTGT+TGG | + | chr3_2:68274806-68274825 | None:intergenic | 35.0% |
| GGCCAATGCTATATATGTTT+GGG | + | chr3_2:68274813-68274832 | None:intergenic | 35.0% | |
| ATGACCCAGAATGTGTAAAA+TGG | - | chr3_2:68274909-68274928 | Msa0420010:CDS | 35.0% | |
| ! | CTCAACCATTTTACACATTC+TGG | + | chr3_2:68274917-68274936 | None:intergenic | 35.0% |
| ! | CATCTGAAAGAATTTGCTTG+GGG | - | chr3_2:68275001-68275020 | Msa0420010:CDS | 35.0% |
| GGTCTCACTATCCATAAAAA+AGG | + | chr3_2:68275046-68275065 | None:intergenic | 35.0% | |
| ACTTCATCTAGAAACTCTTG+TGG | + | chr3_2:68275103-68275122 | None:intergenic | 35.0% | |
| CTAGATGAAGTTAAGGATAG+AGG | - | chr3_2:68275112-68275131 | Msa0420010:CDS | 35.0% | |
| AAGAAAGGCCAACAAATAGT+AGG | + | chr3_2:68275250-68275269 | None:intergenic | 35.0% | |
| ATTTGTACCATTTCCAGCAC+AGG | - | chr3_2:68273449-68273468 | Msa0420010:three_prime_UTR | 40.0% | |
| TTTGTACCATTTCCAGCACA+GGG | - | chr3_2:68273450-68273469 | Msa0420010:three_prime_UTR | 40.0% | |
| GTTTGGCAAGTTGCATGAAA+GGG | + | chr3_2:68273485-68273504 | None:intergenic | 40.0% | |
| AGTTTGGCAAGTTGCATGAA+AGG | + | chr3_2:68273486-68273505 | None:intergenic | 40.0% | |
| ACCTTTGCAACGAAAGAGTT+TGG | + | chr3_2:68273502-68273521 | None:intergenic | 40.0% | |
| TTCTGGTAAACCATCAGGTA+TGG | + | chr3_2:68273625-68273644 | None:intergenic | 40.0% | |
| TCTGATTCTGGTAAACCATC+AGG | + | chr3_2:68273630-68273649 | None:intergenic | 40.0% | |
| TCAGCAACTATGCAAGTAAC+TGG | + | chr3_2:68273762-68273781 | None:intergenic | 40.0% | |
| GTTACTTGCATAGTTGCTGA+TGG | - | chr3_2:68273762-68273781 | Msa0420010:exon | 40.0% | |
| CCAATCTAGACTTGTATCCA+AGG | + | chr3_2:68274605-68274624 | None:intergenic | 40.0% | |
| CCTTGGATACAAGTCTAGAT+TGG | - | chr3_2:68274602-68274621 | Msa0420010:intron | 40.0% | |
| ACAAGTCTAGATTGGATCTC+AGG | - | chr3_2:68274610-68274629 | Msa0420010:intron | 40.0% | |
| TCTGTGATTCTCATGAAGCT+TGG | + | chr3_2:68274664-68274683 | None:intergenic | 40.0% | |
| AACACGTTCGAAGAATTGGA+AGG | - | chr3_2:68274757-68274776 | Msa0420010:intron | 40.0% | |
| TGAAACCCTTGATACCCTTA+GGG | - | chr3_2:68274780-68274799 | Msa0420010:intron | 40.0% | |
| GGGCCAATGCTATATATGTT+TGG | + | chr3_2:68274814-68274833 | None:intergenic | 40.0% | |
| TCTCTACCAAGCATTTGACT+CGG | + | chr3_2:68274835-68274854 | None:intergenic | 40.0% | |
| TGCTTTCTCATCCATCAGTT+GGG | - | chr3_2:68275167-68275186 | Msa0420010:CDS | 40.0% | |
| GATTCTTGACTCATTGTGGT+TGG | - | chr3_2:68275191-68275210 | Msa0420010:CDS | 40.0% | |
| CTGGTATGCCTACTATTTGT+TGG | - | chr3_2:68275239-68275258 | Msa0420010:CDS | 40.0% | |
| ATTTGTACCATTTCCAGCAC+AGG | - | chr3_2:68273449-68273468 | Msa0420010:three_prime_UTR | 40.0% | |
| TTTGTACCATTTCCAGCACA+GGG | - | chr3_2:68273450-68273469 | Msa0420010:three_prime_UTR | 40.0% | |
| GTTTGGCAAGTTGCATGAAA+GGG | + | chr3_2:68273485-68273504 | None:intergenic | 40.0% | |
| AGTTTGGCAAGTTGCATGAA+AGG | + | chr3_2:68273486-68273505 | None:intergenic | 40.0% | |
| ACCTTTGCAACGAAAGAGTT+TGG | + | chr3_2:68273502-68273521 | None:intergenic | 40.0% | |
| TTCTGGTAAACCATCAGGTA+TGG | + | chr3_2:68273625-68273644 | None:intergenic | 40.0% | |
| TCTGATTCTGGTAAACCATC+AGG | + | chr3_2:68273630-68273649 | None:intergenic | 40.0% | |
| TCAGCAACTATGCAAGTAAC+TGG | + | chr3_2:68273762-68273781 | None:intergenic | 40.0% | |
| GTTACTTGCATAGTTGCTGA+TGG | - | chr3_2:68273762-68273781 | Msa0420010:exon | 40.0% | |
| CCAATCTAGACTTGTATCCA+AGG | + | chr3_2:68274605-68274624 | None:intergenic | 40.0% | |
| CCTTGGATACAAGTCTAGAT+TGG | - | chr3_2:68274602-68274621 | Msa0420010:intron | 40.0% | |
| ACAAGTCTAGATTGGATCTC+AGG | - | chr3_2:68274610-68274629 | Msa0420010:intron | 40.0% | |
| TCTGTGATTCTCATGAAGCT+TGG | + | chr3_2:68274664-68274683 | None:intergenic | 40.0% | |
| AACACGTTCGAAGAATTGGA+AGG | - | chr3_2:68274757-68274776 | Msa0420010:intron | 40.0% | |
| TGAAACCCTTGATACCCTTA+GGG | - | chr3_2:68274780-68274799 | Msa0420010:intron | 40.0% | |
| GGGCCAATGCTATATATGTT+TGG | + | chr3_2:68274814-68274833 | None:intergenic | 40.0% | |
| TCTCTACCAAGCATTTGACT+CGG | + | chr3_2:68274835-68274854 | None:intergenic | 40.0% | |
| TGCTTTCTCATCCATCAGTT+GGG | - | chr3_2:68275167-68275186 | Msa0420010:CDS | 40.0% | |
| GATTCTTGACTCATTGTGGT+TGG | - | chr3_2:68275191-68275210 | Msa0420010:CDS | 40.0% | |
| CTGGTATGCCTACTATTTGT+TGG | - | chr3_2:68275239-68275258 | Msa0420010:CDS | 40.0% | |
| ! | TACAGCATGCGGCTTTTGTT+GGG | + | chr3_2:68273430-68273449 | None:intergenic | 45.0% |
| ! | ATACAGCATGCGGCTTTTGT+TGG | + | chr3_2:68273431-68273450 | None:intergenic | 45.0% |
| GCCAAACTCTTTCGTTGCAA+AGG | - | chr3_2:68273498-68273517 | Msa0420010:three_prime_UTR | 45.0% | |
| ! | TCTTGGAGCTGACTTTGTCA+AGG | - | chr3_2:68273575-68273594 | Msa0420010:three_prime_UTR | 45.0% |
| ! | CTTGGAGCTGACTTTGTCAA+GGG | - | chr3_2:68273576-68273595 | Msa0420010:three_prime_UTR | 45.0% |
| ! | CAGTTTGAGACCATACCTGA+TGG | - | chr3_2:68273612-68273631 | Msa0420010:three_prime_UTR | 45.0% |
| CTACTTGCTTCACACAACGT+TGG | + | chr3_2:68273675-68273694 | None:intergenic | 45.0% | |
| !!! | GATGGTTTTTTGGGCTTTGC+TGG | - | chr3_2:68273780-68273799 | Msa0420010:CDS | 45.0% |
| ! | TTTTGGACTGCTTCTGCTTG+TGG | - | chr3_2:68273840-68273859 | Msa0420010:CDS | 45.0% |
| ! | TGCTTCTGCTTGTGGCTTTT+TGG | - | chr3_2:68273848-68273867 | Msa0420010:CDS | 45.0% |
| ! | GCTTCTGCTTGTGGCTTTTT+GGG | - | chr3_2:68273849-68273868 | Msa0420010:CDS | 45.0% |
| TGTCGTGTCAGTGTCATGTT+AGG | - | chr3_2:68274247-68274266 | Msa0420010:intron | 45.0% | |
| GTCATGTTAGGTGTCTCTGT+CGG | - | chr3_2:68274259-68274278 | Msa0420010:intron | 45.0% | |
| TTTCGGAATCCCACATTGCT+CGG | - | chr3_2:68274434-68274453 | Msa0420010:intron | 45.0% | |
| GTGAAACCCTTGATACCCTT+AGG | - | chr3_2:68274779-68274798 | Msa0420010:intron | 45.0% | |
| CTCTACCAAGCATTTGACTC+GGG | + | chr3_2:68274834-68274853 | None:intergenic | 45.0% | |
| AGTGAGACCAGATGTAGCAA+TGG | - | chr3_2:68275057-68275076 | Msa0420010:CDS | 45.0% | |
| GTGAGACCAGATGTAGCAAT+GGG | - | chr3_2:68275058-68275077 | Msa0420010:CDS | 45.0% | |
| TCTTCACCCATTGCTACATC+TGG | + | chr3_2:68275067-68275086 | None:intergenic | 45.0% | |
| GTGCTTTCTCATCCATCAGT+TGG | - | chr3_2:68275166-68275185 | Msa0420010:CDS | 45.0% | |
| GCTTTCTCATCCATCAGTTG+GGG | - | chr3_2:68275168-68275187 | Msa0420010:CDS | 45.0% | |
| CTTTCTCATCCATCAGTTGG+GGG | - | chr3_2:68275169-68275188 | Msa0420010:CDS | 45.0% | |
| GGTTGTTGCTCAGCAAAGAA+AGG | + | chr3_2:68275265-68275284 | None:intergenic | 45.0% | |
| ! | TACAGCATGCGGCTTTTGTT+GGG | + | chr3_2:68273430-68273449 | None:intergenic | 45.0% |
| ! | ATACAGCATGCGGCTTTTGT+TGG | + | chr3_2:68273431-68273450 | None:intergenic | 45.0% |
| GCCAAACTCTTTCGTTGCAA+AGG | - | chr3_2:68273498-68273517 | Msa0420010:three_prime_UTR | 45.0% | |
| ! | TCTTGGAGCTGACTTTGTCA+AGG | - | chr3_2:68273575-68273594 | Msa0420010:three_prime_UTR | 45.0% |
| ! | CTTGGAGCTGACTTTGTCAA+GGG | - | chr3_2:68273576-68273595 | Msa0420010:three_prime_UTR | 45.0% |
| ! | CAGTTTGAGACCATACCTGA+TGG | - | chr3_2:68273612-68273631 | Msa0420010:three_prime_UTR | 45.0% |
| CTACTTGCTTCACACAACGT+TGG | + | chr3_2:68273675-68273694 | None:intergenic | 45.0% | |
| !!! | GATGGTTTTTTGGGCTTTGC+TGG | - | chr3_2:68273780-68273799 | Msa0420010:CDS | 45.0% |
| ! | TTTTGGACTGCTTCTGCTTG+TGG | - | chr3_2:68273840-68273859 | Msa0420010:CDS | 45.0% |
| ! | TGCTTCTGCTTGTGGCTTTT+TGG | - | chr3_2:68273848-68273867 | Msa0420010:CDS | 45.0% |
| ! | GCTTCTGCTTGTGGCTTTTT+GGG | - | chr3_2:68273849-68273868 | Msa0420010:CDS | 45.0% |
| TGTCGTGTCAGTGTCATGTT+AGG | - | chr3_2:68274247-68274266 | Msa0420010:intron | 45.0% | |
| GTCATGTTAGGTGTCTCTGT+CGG | - | chr3_2:68274259-68274278 | Msa0420010:intron | 45.0% | |
| TTTCGGAATCCCACATTGCT+CGG | - | chr3_2:68274434-68274453 | Msa0420010:intron | 45.0% | |
| GTGAAACCCTTGATACCCTT+AGG | - | chr3_2:68274779-68274798 | Msa0420010:intron | 45.0% | |
| CTCTACCAAGCATTTGACTC+GGG | + | chr3_2:68274834-68274853 | None:intergenic | 45.0% | |
| AGTGAGACCAGATGTAGCAA+TGG | - | chr3_2:68275057-68275076 | Msa0420010:CDS | 45.0% | |
| GTGAGACCAGATGTAGCAAT+GGG | - | chr3_2:68275058-68275077 | Msa0420010:CDS | 45.0% | |
| TCTTCACCCATTGCTACATC+TGG | + | chr3_2:68275067-68275086 | None:intergenic | 45.0% | |
| GTGCTTTCTCATCCATCAGT+TGG | - | chr3_2:68275166-68275185 | Msa0420010:CDS | 45.0% | |
| GCTTTCTCATCCATCAGTTG+GGG | - | chr3_2:68275168-68275187 | Msa0420010:CDS | 45.0% | |
| CTTTCTCATCCATCAGTTGG+GGG | - | chr3_2:68275169-68275188 | Msa0420010:CDS | 45.0% | |
| GGTTGTTGCTCAGCAAAGAA+AGG | + | chr3_2:68275265-68275284 | None:intergenic | 45.0% | |
| ! | CTTTTGTTGGGTATGCGGAG+AGG | + | chr3_2:68273418-68273437 | None:intergenic | 50.0% |
| ! | TGCGGCTTTTGTTGGGTATG+CGG | + | chr3_2:68273423-68273442 | None:intergenic | 50.0% |
| ACATGACCCTGTGCTGGAAA+TGG | + | chr3_2:68273459-68273478 | None:intergenic | 50.0% | |
| !! | AATACGGCGAGCTTGTTGAG+AGG | - | chr3_2:68273880-68273899 | Msa0420010:CDS | 50.0% |
| TTCGGAATCCCACATTGCTC+GGG | - | chr3_2:68274435-68274454 | Msa0420010:intron | 50.0% | |
| !! | GTTGGCCCTAAGGGTATCAA+GGG | + | chr3_2:68274788-68274807 | None:intergenic | 50.0% |
| !! | TGTTGGCCCTAAGGGTATCA+AGG | + | chr3_2:68274789-68274808 | None:intergenic | 50.0% |
| !! | GTTTGGGTTGTTGGCCCTAA+GGG | + | chr3_2:68274797-68274816 | None:intergenic | 50.0% |
| !! | TGTTTGGGTTGTTGGCCCTA+AGG | + | chr3_2:68274798-68274817 | None:intergenic | 50.0% |
| ATTGGCCCGAGTCAAATGCT+TGG | - | chr3_2:68274826-68274845 | Msa0420010:intron | 50.0% | |
| GTCAAGAATCCCCCAACTGA+TGG | + | chr3_2:68275181-68275200 | None:intergenic | 50.0% | |
| GGGGGATTCTTGACTCATTG+TGG | - | chr3_2:68275187-68275206 | Msa0420010:CDS | 50.0% | |
| ! | CTTTTGTTGGGTATGCGGAG+AGG | + | chr3_2:68273418-68273437 | None:intergenic | 50.0% |
| ! | TGCGGCTTTTGTTGGGTATG+CGG | + | chr3_2:68273423-68273442 | None:intergenic | 50.0% |
| ACATGACCCTGTGCTGGAAA+TGG | + | chr3_2:68273459-68273478 | None:intergenic | 50.0% | |
| !! | AATACGGCGAGCTTGTTGAG+AGG | - | chr3_2:68273880-68273899 | Msa0420010:CDS | 50.0% |
| TTCGGAATCCCACATTGCTC+GGG | - | chr3_2:68274435-68274454 | Msa0420010:intron | 50.0% | |
| !! | GTTGGCCCTAAGGGTATCAA+GGG | + | chr3_2:68274788-68274807 | None:intergenic | 50.0% |
| !! | TGTTGGCCCTAAGGGTATCA+AGG | + | chr3_2:68274789-68274808 | None:intergenic | 50.0% |
| !! | GTTTGGGTTGTTGGCCCTAA+GGG | + | chr3_2:68274797-68274816 | None:intergenic | 50.0% |
| !! | TGTTTGGGTTGTTGGCCCTA+AGG | + | chr3_2:68274798-68274817 | None:intergenic | 50.0% |
| ATTGGCCCGAGTCAAATGCT+TGG | - | chr3_2:68274826-68274845 | Msa0420010:intron | 50.0% | |
| GTCAAGAATCCCCCAACTGA+TGG | + | chr3_2:68275181-68275200 | None:intergenic | 50.0% | |
| GGGGGATTCTTGACTCATTG+TGG | - | chr3_2:68275187-68275206 | Msa0420010:CDS | 50.0% | |
| TCCCACATTGCTCGGGTTCT+AGG | - | chr3_2:68274442-68274461 | Msa0420010:intron | 55.0% | |
| GCCTAGAACCCGAGCAATGT+GGG | + | chr3_2:68274446-68274465 | None:intergenic | 55.0% | |
| AGCCTAGAACCCGAGCAATG+TGG | + | chr3_2:68274447-68274466 | None:intergenic | 55.0% | |
| !! | TGCTCGGGTTCTAGGCTTGT+TGG | - | chr3_2:68274450-68274469 | Msa0420010:intron | 55.0% |
| TCCCACATTGCTCGGGTTCT+AGG | - | chr3_2:68274442-68274461 | Msa0420010:intron | 55.0% | |
| GCCTAGAACCCGAGCAATGT+GGG | + | chr3_2:68274446-68274465 | None:intergenic | 55.0% | |
| AGCCTAGAACCCGAGCAATG+TGG | + | chr3_2:68274447-68274466 | None:intergenic | 55.0% | |
| !! | TGCTCGGGTTCTAGGCTTGT+TGG | - | chr3_2:68274450-68274469 | Msa0420010:intron | 55.0% |
| GGGTTCACATGACCCTGTGC+TGG | + | chr3_2:68273465-68273484 | None:intergenic | 60.0% | |
| GGGTTCACATGACCCTGTGC+TGG | + | chr3_2:68273465-68273484 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 68273399 | 68275291 | 68273399 | ID=Msa0420010;Name=Msa0420010 |
| chr3_2 | mRNA | 68273399 | 68275291 | 68273399 | ID=Msa0420010-mRNA-1;Parent=Msa0420010;Name=Msa0420010-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0.5|1|1|1|2|379|264 |
| chr3_2 | exon | 68273399 | 68274112 | 68273399 | ID=Msa0420010-mRNA-1:exon:16099;Parent=Msa0420010-mRNA-1 |
| chr3_2 | exon | 68274832 | 68275291 | 68274832 | ID=Msa0420010-mRNA-1:exon:16098;Parent=Msa0420010-mRNA-1 |
| chr3_2 | CDS | 68274832 | 68275291 | 68274832 | ID=Msa0420010-mRNA-1:cds;Parent=Msa0420010-mRNA-1 |
| chr3_2 | CDS | 68273778 | 68274112 | 68273778 | ID=Msa0420010-mRNA-1:cds;Parent=Msa0420010-mRNA-1 |
| chr3_2 | three_prime_UTR | 68273399 | 68273777 | 68273399 | ID=Msa0420010-mRNA-1:three_prime_utr;Parent=Msa0420010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
