Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421640 | XP_039687536.1 | 91.008 | 367 | 17 | 3 | 40 | 404 | 59 | 411 | 0.0 | 654 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421640 | A0A072V0L1 | 91.008 | 367 | 17 | 3 | 40 | 404 | 59 | 411 | 0.0 | 654 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0421640 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0373150 | Msa0421640 | 0.812620 | 3.868910e-51 | -8.615850e-47 |
| Msa0421640 | Msa0518030 | 0.812796 | 3.539274e-51 | -8.615850e-47 |
| Msa0296250 | Msa0421640 | 0.805864 | 1.086252e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421640 | MtrunA17_Chr3g0122091 | 91.008 | 367 | 17 | 3 | 40 | 404 | 59 | 411 | 0.0 | 654 |
| Msa0421640 | MtrunA17_Chr1g0151261 | 46.185 | 249 | 130 | 3 | 77 | 325 | 50 | 294 | 4.17e-63 | 206 |
| Msa0421640 | MtrunA17_Chr1g0153141 | 33.203 | 256 | 138 | 8 | 70 | 317 | 43 | 273 | 1.70e-26 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421640 | AT4G12240.1 | 56.977 | 344 | 126 | 5 | 71 | 404 | 30 | 361 | 9.04e-135 | 390 |
| Msa0421640 | AT5G52010.1 | 46.400 | 250 | 128 | 4 | 75 | 324 | 71 | 314 | 1.50e-62 | 206 |
Find 99 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGCTATTCTGAGCTTAT+TGG | 0.177466 | 3_2:+70672769 | None:intergenic |
| AGCTGAAACGGGCAGGGTTT+TGG | 0.228799 | 3_2:-70672373 | Msa0421640:CDS |
| TATGTAGAGTAGGGCTGTTC+TGG | 0.246065 | 3_2:-70672838 | Msa0421640:CDS |
| AGAATAGCTGCAGCTTCTTT+TGG | 0.246225 | 3_2:-70672758 | Msa0421640:CDS |
| TGTCTCAAGACTGTTGTTAT+TGG | 0.251511 | 3_2:-70672200 | Msa0421640:CDS |
| GTCTCAAGACTGTTGTTATT+GGG | 0.278322 | 3_2:-70672199 | Msa0421640:CDS |
| AGGGAGTAGAAAGGTGAAAT+TGG | 0.313386 | 3_2:-70672483 | Msa0421640:CDS |
| TGAGACGACACTGTCATTCT+TGG | 0.314624 | 3_2:-70672901 | Msa0421640:CDS |
| GAGACGACACTGTCATTCTT+GGG | 0.319372 | 3_2:-70672900 | Msa0421640:CDS |
| GGGTAAGTATGCTATGAAAA+TGG | 0.326589 | 3_2:-70672459 | Msa0421640:CDS |
| TTCATAAGGTGGGATTGAAT+TGG | 0.333130 | 3_2:+70672796 | None:intergenic |
| TTGGGGTCACGGAAGGATTT+CGG | 0.339709 | 3_2:-70672882 | Msa0421640:CDS |
| TCATAGGCGGGTTGAGTGTT+TGG | 0.351038 | 3_2:-70672279 | Msa0421640:CDS |
| AGCTTATTGGCAACTTCATA+AGG | 0.365446 | 3_2:+70672782 | None:intergenic |
| ACAGGAACTGTTGTATCGTT+TGG | 0.373770 | 3_2:-70672654 | Msa0421640:CDS |
| CTGTATCGGTTGTGGAAAAC+TGG | 0.377175 | 3_2:-70672088 | Msa0421640:CDS |
| GTTGTATCGTTTGGAGGATA+AGG | 0.381598 | 3_2:-70672645 | Msa0421640:CDS |
| CTCATGTTTGTCGTGTTTGT+GGG | 0.391232 | 3_2:-70672601 | Msa0421640:CDS |
| GGGTTCAAACTGTGTTAGAT+AGG | 0.398462 | 3_2:-70672352 | Msa0421640:CDS |
| CCTCATGTTTGTCGTGTTTG+TGG | 0.413883 | 3_2:-70672602 | Msa0421640:CDS |
| GCCAAACCATACCCAACTTT+AGG | 0.418960 | 3_2:+70672401 | None:intergenic |
| TCCTAAAGTTGGGTATGGTT+TGG | 0.425982 | 3_2:-70672402 | Msa0421640:CDS |
| TTGACTCCTAAAGTTGGGTA+TGG | 0.429889 | 3_2:-70672407 | Msa0421640:CDS |
| TCATAAGGTGGGATTGAATT+GGG | 0.443856 | 3_2:+70672797 | None:intergenic |
| TTTGATGGGGAAGGCGAAGA+AGG | 0.453176 | 3_2:-70672114 | Msa0421640:CDS |
| GATGCAGTTCCTAAAACATC+TGG | 0.457052 | 3_2:-70671990 | Msa0421640:CDS |
| AAATTAGACTCCGATGATAA+TGG | 0.457209 | 3_2:-70671897 | Msa0421640:CDS |
| CAAGAAAGGGATCTCACGGC+GGG | 0.461659 | 3_2:+70673642 | None:intergenic |
| TTGTATCGTTTGGAGGATAA+GGG | 0.462961 | 3_2:-70672644 | Msa0421640:CDS |
| GCTGATGAGCTGAAACGGGC+AGG | 0.464292 | 3_2:-70672380 | Msa0421640:CDS |
| CTCACGGCGGGGTGAGAGAA+TGG | 0.466813 | 3_2:+70673654 | None:intergenic |
| TGGTGGATATGATGGATCAT+AGG | 0.472905 | 3_2:-70672295 | Msa0421640:CDS |
| TCGTGATATATTGAAAAGAT+TGG | 0.474466 | 3_2:-70672060 | Msa0421640:CDS |
| ATTGCTAAAAGTGTGGCTAT+TGG | 0.475645 | 3_2:+70672709 | None:intergenic |
| TTTCACGGCGACGGCAAGAA+AGG | 0.479344 | 3_2:+70673628 | None:intergenic |
| TGAGTGTTTGGTTCTTGTAT+CGG | 0.489683 | 3_2:-70672267 | Msa0421640:CDS |
| TCTCAAGACTGTTGTTATTG+GGG | 0.494985 | 3_2:-70672198 | Msa0421640:CDS |
| TATTGCATTGCAAAAGCATA+TGG | 0.499781 | 3_2:-70672315 | Msa0421640:CDS |
| CACTGTCATTCTTGGGGTCA+CGG | 0.505218 | 3_2:-70672893 | Msa0421640:CDS |
| ACTCTACATAGCTTCTCATT+CGG | 0.506498 | 3_2:+70672851 | None:intergenic |
| GAAGGAGGCTGTATCGGTTG+TGG | 0.514904 | 3_2:-70672096 | Msa0421640:CDS |
| GCAGTGATGGAGTCTTGAAA+AGG | 0.516098 | 3_2:-70672169 | Msa0421640:CDS |
| ATGTAGAGTAGGGCTGTTCT+GGG | 0.518539 | 3_2:-70672837 | Msa0421640:CDS |
| GTTTGGCTGATGAGCTGAAA+CGG | 0.521781 | 3_2:-70672385 | Msa0421640:CDS |
| GGCGAAGAAGGAGGCTGTAT+CGG | 0.522314 | 3_2:-70672102 | Msa0421640:CDS |
| AAAGCATATGGTGGATATGA+TGG | 0.523680 | 3_2:-70672303 | Msa0421640:CDS |
| TTCACGGCGACGGCAAGAAA+GGG | 0.523963 | 3_2:+70673629 | None:intergenic |
| GTCATTCTTGGGGTCACGGA+AGG | 0.525218 | 3_2:-70672889 | Msa0421640:CDS |
| GGAACTGTTGTATCGTTTGG+AGG | 0.537669 | 3_2:-70672651 | Msa0421640:CDS |
| GAAAATGGAAAAGTATAAGA+AGG | 0.542297 | 3_2:-70672444 | Msa0421640:CDS |
| TCGTGAGAGGAGGAAAGAAC+AGG | 0.542932 | 3_2:-70672672 | Msa0421640:CDS |
| CTCCTCTCACGAACAACGTG+GGG | 0.546733 | 3_2:+70672683 | None:intergenic |
| AATGAGAAGCTATGTAGAGT+AGG | 0.549536 | 3_2:-70672848 | Msa0421640:CDS |
| AAGGCGGAATCAGATAGAAT+CGG | 0.553848 | 3_2:-70672510 | Msa0421640:CDS |
| TATTGGCAACTTCATAAGGT+GGG | 0.553988 | 3_2:+70672786 | None:intergenic |
| CTATTGTGTAGAATATTCTA+CGG | 0.555084 | 3_2:+70672954 | None:intergenic |
| TTTGGCTGATGAGCTGAAAC+GGG | 0.555204 | 3_2:-70672384 | Msa0421640:CDS |
| ACAAGGATGACAGAGGTCCT+TGG | 0.556458 | 3_2:-70671923 | Msa0421640:CDS |
| TGGAGTTGTTCGACATATGG+TGG | 0.559762 | 3_2:-70672738 | Msa0421640:CDS |
| GCAACAACGAAAGGATTTCA+CGG | 0.560963 | 3_2:+70673613 | None:intergenic |
| ATGAGAAGCTATGTAGAGTA+GGG | 0.561703 | 3_2:-70672847 | Msa0421640:CDS |
| CTGATGAGCTGAAACGGGCA+GGG | 0.566688 | 3_2:-70672379 | Msa0421640:CDS |
| ATCGGCTAGAGGGAGTAGAA+AGG | 0.569230 | 3_2:-70672492 | Msa0421640:CDS |
| GGATATGATGGATCATAGGC+GGG | 0.572337 | 3_2:-70672291 | Msa0421640:CDS |
| GAGTAGAAAGGTGAAATTGG+TGG | 0.573655 | 3_2:-70672480 | Msa0421640:CDS |
| ATCAGATAGAATCGGCTAGA+GGG | 0.575206 | 3_2:-70672502 | Msa0421640:CDS |
| ATTTGCAACACCATTATCAT+CGG | 0.578456 | 3_2:+70671887 | None:intergenic |
| ATGAGCGTGAGCATGCGAAA+AGG | 0.580807 | 3_2:-70672529 | Msa0421640:CDS |
| TAAGGTGGGATTGAATTGGG+TGG | 0.598304 | 3_2:+70672800 | None:intergenic |
| TCCTCCTCTCACGAACAACG+TGG | 0.601028 | 3_2:+70672681 | None:intergenic |
| AACAAATGTTTGAATGCCAG+TGG | 0.602266 | 3_2:+70672928 | None:intergenic |
| AGAATGACAGTGTCGTCTCA+AGG | 0.604787 | 3_2:+70672904 | None:intergenic |
| CCCACGTTGTTCGTGAGAGG+AGG | 0.604916 | 3_2:-70672682 | Msa0421640:CDS |
| ACGGCAAGAAAGGGATCTCA+CGG | 0.605301 | 3_2:+70673638 | None:intergenic |
| AATGCAATATCCGCAGCTTG+CGG | 0.606975 | 3_2:+70672329 | None:intergenic |
| AGACGACACTGTCATTCTTG+GGG | 0.607766 | 3_2:-70672899 | Msa0421640:CDS |
| AGTAGAAAGGTGAAATTGGT+GGG | 0.609374 | 3_2:-70672479 | Msa0421640:CDS |
| TGCATTGCAAAAGCATATGG+TGG | 0.610349 | 3_2:-70672312 | Msa0421640:CDS |
| TTCTACACAATAGAAGCCAC+TGG | 0.610989 | 3_2:-70672944 | Msa0421640:CDS |
| GTGGACATATAACCCAGAAG+TGG | 0.612100 | 3_2:-70672036 | Msa0421640:CDS |
| TTATTGGCAACTTCATAAGG+TGG | 0.612373 | 3_2:+70672785 | None:intergenic |
| CCTCCTCTCACGAACAACGT+GGG | 0.620111 | 3_2:+70672682 | None:intergenic |
| GATGGGGAAGGCGAAGAAGG+AGG | 0.621967 | 3_2:-70672111 | Msa0421640:CDS |
| AATCAGATAGAATCGGCTAG+AGG | 0.623094 | 3_2:-70672503 | Msa0421640:CDS |
| ATGTTTGTCGTGTTTGTGGG+AGG | 0.623967 | 3_2:-70672598 | Msa0421640:CDS |
| AGCGTGAGCATGCGAAAAGG+CGG | 0.626856 | 3_2:-70672526 | Msa0421640:CDS |
| ACGAAAGGATTTCACGGCGA+CGG | 0.630049 | 3_2:+70673619 | None:intergenic |
| AGGATGACAGAGGTCCTTGG+TGG | 0.631079 | 3_2:-70671920 | Msa0421640:CDS |
| GTTAGATAGGCCGCAAGCTG+CGG | 0.632475 | 3_2:-70672339 | Msa0421640:CDS |
| TCATATTGATGATGACTACA+AGG | 0.634259 | 3_2:-70671940 | Msa0421640:CDS |
| TTATGAAGGAAGCAAAGCTA+CGG | 0.640003 | 3_2:-70672223 | Msa0421640:CDS |
| TGGATATGATGGATCATAGG+CGG | 0.652070 | 3_2:-70672292 | Msa0421640:CDS |
| ATATATTGAAAAGATTGGAG+TGG | 0.659405 | 3_2:-70672055 | Msa0421640:CDS |
| CCACAAACACGACAAACATG+AGG | 0.661362 | 3_2:+70672602 | None:intergenic |
| GCAAGAAAGGGATCTCACGG+CGG | 0.668044 | 3_2:+70673641 | None:intergenic |
| TCCTCTCACGAACAACGTGG+GGG | 0.698129 | 3_2:+70672684 | None:intergenic |
| TCGGAGTCTAATTTCCACCA+AGG | 0.709650 | 3_2:+70671906 | None:intergenic |
| AAGAAAGGGATCTCACGGCG+GGG | 0.713359 | 3_2:+70673643 | None:intergenic |
| GATGACTACAAGGATGACAG+AGG | 0.730694 | 3_2:-70671930 | Msa0421640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTAGCTATTGATAAAAAA+AGG | + | chr3_2:70672180-70672199 | None:intergenic | 20.0% |
| !!! | AATACCAATTTTTCTAAACA+TGG | + | chr3_2:70672462-70672481 | None:intergenic | 20.0% |
| !!! | TTGAATTCATTTGTTTTCTT+CGG | - | chr3_2:70672524-70672543 | Msa0421640:CDS | 20.0% |
| !! | AAACCATAAATAATCAAACA+AGG | + | chr3_2:70672551-70672570 | None:intergenic | 20.0% |
| !!! | TTCTAGCTATTGATAAAAAA+AGG | + | chr3_2:70672180-70672199 | None:intergenic | 20.0% |
| !!! | AATACCAATTTTTCTAAACA+TGG | + | chr3_2:70672462-70672481 | None:intergenic | 20.0% |
| !!! | TTGAATTCATTTGTTTTCTT+CGG | - | chr3_2:70672524-70672543 | Msa0421640:CDS | 20.0% |
| !! | AAACCATAAATAATCAAACA+AGG | + | chr3_2:70672551-70672570 | None:intergenic | 20.0% |
| !! | AAGCTTGGATTTGATTTATT+TGG | - | chr3_2:70672020-70672039 | Msa0421640:CDS | 25.0% |
| ! | ACTTTGAATTATACCTTCAA+AGG | - | chr3_2:70672228-70672247 | Msa0421640:CDS | 25.0% |
| ! | TATTTCTTCTATTCCTTTGA+AGG | + | chr3_2:70672244-70672263 | None:intergenic | 25.0% |
| !! | AATTCATGAGAATGATAATG+TGG | - | chr3_2:70672344-70672363 | Msa0421640:CDS | 25.0% |
| ! | ATCTCCATGTTTAGAAAAAT+TGG | - | chr3_2:70672455-70672474 | Msa0421640:CDS | 25.0% |
| ! | CTATTGTGTAGAATATTCTA+CGG | + | chr3_2:70672587-70672606 | None:intergenic | 25.0% |
| !! | GAAAATGGAAAAGTATAAGA+AGG | - | chr3_2:70673094-70673113 | Msa0421640:CDS | 25.0% |
| ! | TCGTGATATATTGAAAAGAT+TGG | - | chr3_2:70673478-70673497 | Msa0421640:intron | 25.0% |
| ! | ATATATTGAAAAGATTGGAG+TGG | - | chr3_2:70673483-70673502 | Msa0421640:intron | 25.0% |
| !! | AAGCTTGGATTTGATTTATT+TGG | - | chr3_2:70672020-70672039 | Msa0421640:CDS | 25.0% |
| ! | ACTTTGAATTATACCTTCAA+AGG | - | chr3_2:70672228-70672247 | Msa0421640:CDS | 25.0% |
| ! | TATTTCTTCTATTCCTTTGA+AGG | + | chr3_2:70672244-70672263 | None:intergenic | 25.0% |
| !! | AATTCATGAGAATGATAATG+TGG | - | chr3_2:70672344-70672363 | Msa0421640:CDS | 25.0% |
| ! | ATCTCCATGTTTAGAAAAAT+TGG | - | chr3_2:70672455-70672474 | Msa0421640:CDS | 25.0% |
| ! | CTATTGTGTAGAATATTCTA+CGG | + | chr3_2:70672587-70672606 | None:intergenic | 25.0% |
| !! | GAAAATGGAAAAGTATAAGA+AGG | - | chr3_2:70673094-70673113 | Msa0421640:CDS | 25.0% |
| ! | TCGTGATATATTGAAAAGAT+TGG | - | chr3_2:70673478-70673497 | Msa0421640:intron | 25.0% |
| ! | ATATATTGAAAAGATTGGAG+TGG | - | chr3_2:70673483-70673502 | Msa0421640:intron | 25.0% |
| ! | GGATTTGATTTATTTGGTGA+TGG | - | chr3_2:70672026-70672045 | Msa0421640:CDS | 30.0% |
| TAGTTGCTTGTAAATTCAGT+TGG | - | chr3_2:70672082-70672101 | Msa0421640:CDS | 30.0% | |
| CAGCAAAAATCATTCAATCA+AGG | + | chr3_2:70672125-70672144 | None:intergenic | 30.0% | |
| CATGAATTAAATCGCTTTAC+AGG | + | chr3_2:70672332-70672351 | None:intergenic | 30.0% | |
| ! | AATGATAATGTGGCGAAATA+TGG | - | chr3_2:70672354-70672373 | Msa0421640:CDS | 30.0% |
| ! | GGACCTTGTTTGATTATTTA+TGG | - | chr3_2:70672545-70672564 | Msa0421640:CDS | 30.0% |
| ! | TATTGCATTGCAAAAGCATA+TGG | - | chr3_2:70673223-70673242 | Msa0421640:intron | 30.0% |
| ! | TGATTTTGTCGATGTTATGA+AGG | - | chr3_2:70673301-70673320 | Msa0421640:intron | 30.0% |
| ! | GTTTCTTTTTATCCACTTCT+GGG | + | chr3_2:70673517-70673536 | None:intergenic | 30.0% |
| ! | TGTTTCTTTTTATCCACTTC+TGG | + | chr3_2:70673518-70673537 | None:intergenic | 30.0% |
| GGATAAAAAGAAACACAACT+TGG | - | chr3_2:70673523-70673542 | Msa0421640:intron | 30.0% | |
| !! | TCATATTGATGATGACTACA+AGG | - | chr3_2:70673598-70673617 | Msa0421640:intron | 30.0% |
| AAATTAGACTCCGATGATAA+TGG | - | chr3_2:70673641-70673660 | Msa0421640:CDS | 30.0% | |
| ATTTGCAACACCATTATCAT+CGG | + | chr3_2:70673654-70673673 | None:intergenic | 30.0% | |
| ! | GGATTTGATTTATTTGGTGA+TGG | - | chr3_2:70672026-70672045 | Msa0421640:CDS | 30.0% |
| TAGTTGCTTGTAAATTCAGT+TGG | - | chr3_2:70672082-70672101 | Msa0421640:CDS | 30.0% | |
| CAGCAAAAATCATTCAATCA+AGG | + | chr3_2:70672125-70672144 | None:intergenic | 30.0% | |
| CATGAATTAAATCGCTTTAC+AGG | + | chr3_2:70672332-70672351 | None:intergenic | 30.0% | |
| ! | AATGATAATGTGGCGAAATA+TGG | - | chr3_2:70672354-70672373 | Msa0421640:CDS | 30.0% |
| ! | GGACCTTGTTTGATTATTTA+TGG | - | chr3_2:70672545-70672564 | Msa0421640:CDS | 30.0% |
| ! | TATTGCATTGCAAAAGCATA+TGG | - | chr3_2:70673223-70673242 | Msa0421640:intron | 30.0% |
| ! | TGATTTTGTCGATGTTATGA+AGG | - | chr3_2:70673301-70673320 | Msa0421640:intron | 30.0% |
| ! | GTTTCTTTTTATCCACTTCT+GGG | + | chr3_2:70673517-70673536 | None:intergenic | 30.0% |
| ! | TGTTTCTTTTTATCCACTTC+TGG | + | chr3_2:70673518-70673537 | None:intergenic | 30.0% |
| GGATAAAAAGAAACACAACT+TGG | - | chr3_2:70673523-70673542 | Msa0421640:intron | 30.0% | |
| !! | TCATATTGATGATGACTACA+AGG | - | chr3_2:70673598-70673617 | Msa0421640:intron | 30.0% |
| AAATTAGACTCCGATGATAA+TGG | - | chr3_2:70673641-70673660 | Msa0421640:CDS | 30.0% | |
| ATTTGCAACACCATTATCAT+CGG | + | chr3_2:70673654-70673673 | None:intergenic | 30.0% | |
| CATGCAACAAGAGATGTAAA+GGG | + | chr3_2:70671994-70672013 | None:intergenic | 35.0% | |
| AGATCGTATTTGTGAATGCA+AGG | - | chr3_2:70672264-70672283 | Msa0421640:CDS | 35.0% | |
| AGAATATTCTACGGAACTTG+AGG | + | chr3_2:70672578-70672597 | None:intergenic | 35.0% | |
| AACAAATGTTTGAATGCCAG+TGG | + | chr3_2:70672613-70672632 | None:intergenic | 35.0% | |
| ACTCTACATAGCTTCTCATT+CGG | + | chr3_2:70672690-70672709 | None:intergenic | 35.0% | |
| AATGAGAAGCTATGTAGAGT+AGG | - | chr3_2:70672690-70672709 | Msa0421640:CDS | 35.0% | |
| ATGAGAAGCTATGTAGAGTA+GGG | - | chr3_2:70672691-70672710 | Msa0421640:CDS | 35.0% | |
| TCATAAGGTGGGATTGAATT+GGG | + | chr3_2:70672744-70672763 | None:intergenic | 35.0% | |
| TTCATAAGGTGGGATTGAAT+TGG | + | chr3_2:70672745-70672764 | None:intergenic | 35.0% | |
| TATTGGCAACTTCATAAGGT+GGG | + | chr3_2:70672755-70672774 | None:intergenic | 35.0% | |
| TTATTGGCAACTTCATAAGG+TGG | + | chr3_2:70672756-70672775 | None:intergenic | 35.0% | |
| AGCTTATTGGCAACTTCATA+AGG | + | chr3_2:70672759-70672778 | None:intergenic | 35.0% | |
| !!! | TTTTGGAGTTGTTCGACATA+TGG | - | chr3_2:70672797-70672816 | Msa0421640:CDS | 35.0% |
| ! | ATTGCTAAAAGTGTGGCTAT+TGG | + | chr3_2:70672832-70672851 | None:intergenic | 35.0% |
| TTGTATCGTTTGGAGGATAA+GGG | - | chr3_2:70672894-70672913 | Msa0421640:CDS | 35.0% | |
| AGTAGAAAGGTGAAATTGGT+GGG | - | chr3_2:70673059-70673078 | Msa0421640:intron | 35.0% | |
| GGGTAAGTATGCTATGAAAA+TGG | - | chr3_2:70673079-70673098 | Msa0421640:intron | 35.0% | |
| !!! | CTGTTTTGACTCCTAAAGTT+GGG | - | chr3_2:70673126-70673145 | Msa0421640:intron | 35.0% |
| !! | AAAGCATATGGTGGATATGA+TGG | - | chr3_2:70673235-70673254 | Msa0421640:intron | 35.0% |
| !! | TGAGTGTTTGGTTCTTGTAT+CGG | - | chr3_2:70673271-70673290 | Msa0421640:intron | 35.0% |
| TTATGAAGGAAGCAAAGCTA+CGG | - | chr3_2:70673315-70673334 | Msa0421640:intron | 35.0% | |
| TGTCTCAAGACTGTTGTTAT+TGG | - | chr3_2:70673338-70673357 | Msa0421640:intron | 35.0% | |
| ! | GTCTCAAGACTGTTGTTATT+GGG | - | chr3_2:70673339-70673358 | Msa0421640:intron | 35.0% |
| ! | TCTCAAGACTGTTGTTATTG+GGG | - | chr3_2:70673340-70673359 | Msa0421640:intron | 35.0% |
| !! | TTCTTGGGAGGATATTTTGA+TGG | - | chr3_2:70673409-70673428 | Msa0421640:intron | 35.0% |
| !!! | TCTTGGGAGGATATTTTGAT+GGG | - | chr3_2:70673410-70673429 | Msa0421640:intron | 35.0% |
| ! | TCATCAACTCCAGATGTTTT+AGG | + | chr3_2:70673560-70673579 | None:intergenic | 35.0% |
| CATGCAACAAGAGATGTAAA+GGG | + | chr3_2:70671994-70672013 | None:intergenic | 35.0% | |
| AGATCGTATTTGTGAATGCA+AGG | - | chr3_2:70672264-70672283 | Msa0421640:CDS | 35.0% | |
| AGAATATTCTACGGAACTTG+AGG | + | chr3_2:70672578-70672597 | None:intergenic | 35.0% | |
| AACAAATGTTTGAATGCCAG+TGG | + | chr3_2:70672613-70672632 | None:intergenic | 35.0% | |
| ACTCTACATAGCTTCTCATT+CGG | + | chr3_2:70672690-70672709 | None:intergenic | 35.0% | |
| AATGAGAAGCTATGTAGAGT+AGG | - | chr3_2:70672690-70672709 | Msa0421640:CDS | 35.0% | |
| ATGAGAAGCTATGTAGAGTA+GGG | - | chr3_2:70672691-70672710 | Msa0421640:CDS | 35.0% | |
| TCATAAGGTGGGATTGAATT+GGG | + | chr3_2:70672744-70672763 | None:intergenic | 35.0% | |
| TTCATAAGGTGGGATTGAAT+TGG | + | chr3_2:70672745-70672764 | None:intergenic | 35.0% | |
| TATTGGCAACTTCATAAGGT+GGG | + | chr3_2:70672755-70672774 | None:intergenic | 35.0% | |
| TTATTGGCAACTTCATAAGG+TGG | + | chr3_2:70672756-70672775 | None:intergenic | 35.0% | |
| AGCTTATTGGCAACTTCATA+AGG | + | chr3_2:70672759-70672778 | None:intergenic | 35.0% | |
| !!! | TTTTGGAGTTGTTCGACATA+TGG | - | chr3_2:70672797-70672816 | Msa0421640:CDS | 35.0% |
| ! | ATTGCTAAAAGTGTGGCTAT+TGG | + | chr3_2:70672832-70672851 | None:intergenic | 35.0% |
| TTGTATCGTTTGGAGGATAA+GGG | - | chr3_2:70672894-70672913 | Msa0421640:CDS | 35.0% | |
| AGTAGAAAGGTGAAATTGGT+GGG | - | chr3_2:70673059-70673078 | Msa0421640:intron | 35.0% | |
| GGGTAAGTATGCTATGAAAA+TGG | - | chr3_2:70673079-70673098 | Msa0421640:intron | 35.0% | |
| !!! | CTGTTTTGACTCCTAAAGTT+GGG | - | chr3_2:70673126-70673145 | Msa0421640:intron | 35.0% |
| !! | AAAGCATATGGTGGATATGA+TGG | - | chr3_2:70673235-70673254 | Msa0421640:intron | 35.0% |
| !! | TGAGTGTTTGGTTCTTGTAT+CGG | - | chr3_2:70673271-70673290 | Msa0421640:intron | 35.0% |
| TTATGAAGGAAGCAAAGCTA+CGG | - | chr3_2:70673315-70673334 | Msa0421640:intron | 35.0% | |
| TGTCTCAAGACTGTTGTTAT+TGG | - | chr3_2:70673338-70673357 | Msa0421640:intron | 35.0% | |
| ! | GTCTCAAGACTGTTGTTATT+GGG | - | chr3_2:70673339-70673358 | Msa0421640:intron | 35.0% |
| ! | TCTCAAGACTGTTGTTATTG+GGG | - | chr3_2:70673340-70673359 | Msa0421640:intron | 35.0% |
| !! | TTCTTGGGAGGATATTTTGA+TGG | - | chr3_2:70673409-70673428 | Msa0421640:intron | 35.0% |
| !!! | TCTTGGGAGGATATTTTGAT+GGG | - | chr3_2:70673410-70673429 | Msa0421640:intron | 35.0% |
| ! | TCATCAACTCCAGATGTTTT+AGG | + | chr3_2:70673560-70673579 | None:intergenic | 35.0% |
| GCAACAACGAAAGGATTTCA+CGG | + | chr3_2:70671928-70671947 | None:intergenic | 40.0% | |
| CAACAAGAGATGTAAAGGGA+AGG | + | chr3_2:70671990-70672009 | None:intergenic | 40.0% | |
| GCATGCAACAAGAGATGTAA+AGG | + | chr3_2:70671995-70672014 | None:intergenic | 40.0% | |
| TGTTGCATGCATTAGAAGCT+TGG | - | chr3_2:70672005-70672024 | Msa0421640:CDS | 40.0% | |
| TTCTACACAATAGAAGCCAC+TGG | - | chr3_2:70672594-70672613 | Msa0421640:CDS | 40.0% | |
| TGCAGCTATTCTGAGCTTAT+TGG | + | chr3_2:70672772-70672791 | None:intergenic | 40.0% | |
| ! | AGAATAGCTGCAGCTTCTTT+TGG | - | chr3_2:70672780-70672799 | Msa0421640:CDS | 40.0% |
| ACAGGAACTGTTGTATCGTT+TGG | - | chr3_2:70672884-70672903 | Msa0421640:CDS | 40.0% | |
| GTTGTATCGTTTGGAGGATA+AGG | - | chr3_2:70672893-70672912 | Msa0421640:CDS | 40.0% | |
| CTCATGTTTGTCGTGTTTGT+GGG | - | chr3_2:70672937-70672956 | Msa0421640:CDS | 40.0% | |
| AAGGCGGAATCAGATAGAAT+CGG | - | chr3_2:70673028-70673047 | Msa0421640:intron | 40.0% | |
| AATCAGATAGAATCGGCTAG+AGG | - | chr3_2:70673035-70673054 | Msa0421640:intron | 40.0% | |
| ATCAGATAGAATCGGCTAGA+GGG | - | chr3_2:70673036-70673055 | Msa0421640:intron | 40.0% | |
| AGGGAGTAGAAAGGTGAAAT+TGG | - | chr3_2:70673055-70673074 | Msa0421640:intron | 40.0% | |
| GAGTAGAAAGGTGAAATTGG+TGG | - | chr3_2:70673058-70673077 | Msa0421640:intron | 40.0% | |
| !!! | GCTGTTTTGACTCCTAAAGT+TGG | - | chr3_2:70673125-70673144 | Msa0421640:intron | 40.0% |
| TTGACTCCTAAAGTTGGGTA+TGG | - | chr3_2:70673131-70673150 | Msa0421640:intron | 40.0% | |
| TCCTAAAGTTGGGTATGGTT+TGG | - | chr3_2:70673136-70673155 | Msa0421640:intron | 40.0% | |
| GGGTTCAAACTGTGTTAGAT+AGG | - | chr3_2:70673186-70673205 | Msa0421640:intron | 40.0% | |
| ! | TGCATTGCAAAAGCATATGG+TGG | - | chr3_2:70673226-70673245 | Msa0421640:intron | 40.0% |
| !! | TGGTGGATATGATGGATCAT+AGG | - | chr3_2:70673243-70673262 | Msa0421640:intron | 40.0% |
| !! | TGGATATGATGGATCATAGG+CGG | - | chr3_2:70673246-70673265 | Msa0421640:intron | 40.0% |
| !! | ATTGGGGATTTTAGCAGTGA+TGG | - | chr3_2:70673356-70673375 | Msa0421640:intron | 40.0% |
| !!! | TGCCGATACTGCTTTTTCTT+GGG | - | chr3_2:70673394-70673413 | Msa0421640:intron | 40.0% |
| CTCCCAAGAAAAAGCAGTAT+CGG | + | chr3_2:70673399-70673418 | None:intergenic | 40.0% | |
| !!! | CTTGGGAGGATATTTTGATG+GGG | - | chr3_2:70673411-70673430 | Msa0421640:intron | 40.0% |
| GATGCAGTTCCTAAAACATC+TGG | - | chr3_2:70673548-70673567 | Msa0421640:intron | 40.0% | |
| GCAACAACGAAAGGATTTCA+CGG | + | chr3_2:70671928-70671947 | None:intergenic | 40.0% | |
| CAACAAGAGATGTAAAGGGA+AGG | + | chr3_2:70671990-70672009 | None:intergenic | 40.0% | |
| GCATGCAACAAGAGATGTAA+AGG | + | chr3_2:70671995-70672014 | None:intergenic | 40.0% | |
| TGTTGCATGCATTAGAAGCT+TGG | - | chr3_2:70672005-70672024 | Msa0421640:CDS | 40.0% | |
| TTCTACACAATAGAAGCCAC+TGG | - | chr3_2:70672594-70672613 | Msa0421640:CDS | 40.0% | |
| TGCAGCTATTCTGAGCTTAT+TGG | + | chr3_2:70672772-70672791 | None:intergenic | 40.0% | |
| ! | AGAATAGCTGCAGCTTCTTT+TGG | - | chr3_2:70672780-70672799 | Msa0421640:CDS | 40.0% |
| ACAGGAACTGTTGTATCGTT+TGG | - | chr3_2:70672884-70672903 | Msa0421640:CDS | 40.0% | |
| GTTGTATCGTTTGGAGGATA+AGG | - | chr3_2:70672893-70672912 | Msa0421640:CDS | 40.0% | |
| CTCATGTTTGTCGTGTTTGT+GGG | - | chr3_2:70672937-70672956 | Msa0421640:CDS | 40.0% | |
| AAGGCGGAATCAGATAGAAT+CGG | - | chr3_2:70673028-70673047 | Msa0421640:intron | 40.0% | |
| AATCAGATAGAATCGGCTAG+AGG | - | chr3_2:70673035-70673054 | Msa0421640:intron | 40.0% | |
| ATCAGATAGAATCGGCTAGA+GGG | - | chr3_2:70673036-70673055 | Msa0421640:intron | 40.0% | |
| AGGGAGTAGAAAGGTGAAAT+TGG | - | chr3_2:70673055-70673074 | Msa0421640:intron | 40.0% | |
| GAGTAGAAAGGTGAAATTGG+TGG | - | chr3_2:70673058-70673077 | Msa0421640:intron | 40.0% | |
| !!! | GCTGTTTTGACTCCTAAAGT+TGG | - | chr3_2:70673125-70673144 | Msa0421640:intron | 40.0% |
| TTGACTCCTAAAGTTGGGTA+TGG | - | chr3_2:70673131-70673150 | Msa0421640:intron | 40.0% | |
| TCCTAAAGTTGGGTATGGTT+TGG | - | chr3_2:70673136-70673155 | Msa0421640:intron | 40.0% | |
| GGGTTCAAACTGTGTTAGAT+AGG | - | chr3_2:70673186-70673205 | Msa0421640:intron | 40.0% | |
| ! | TGCATTGCAAAAGCATATGG+TGG | - | chr3_2:70673226-70673245 | Msa0421640:intron | 40.0% |
| !! | TGGTGGATATGATGGATCAT+AGG | - | chr3_2:70673243-70673262 | Msa0421640:intron | 40.0% |
| !! | TGGATATGATGGATCATAGG+CGG | - | chr3_2:70673246-70673265 | Msa0421640:intron | 40.0% |
| !! | ATTGGGGATTTTAGCAGTGA+TGG | - | chr3_2:70673356-70673375 | Msa0421640:intron | 40.0% |
| !!! | TGCCGATACTGCTTTTTCTT+GGG | - | chr3_2:70673394-70673413 | Msa0421640:intron | 40.0% |
| CTCCCAAGAAAAAGCAGTAT+CGG | + | chr3_2:70673399-70673418 | None:intergenic | 40.0% | |
| !!! | CTTGGGAGGATATTTTGATG+GGG | - | chr3_2:70673411-70673430 | Msa0421640:intron | 40.0% |
| GATGCAGTTCCTAAAACATC+TGG | - | chr3_2:70673548-70673567 | Msa0421640:intron | 40.0% | |
| AGTGAACCTGAGATTCGTTC+CGG | + | chr3_2:70671961-70671980 | None:intergenic | 45.0% | |
| AGAATGACAGTGTCGTCTCA+AGG | + | chr3_2:70672637-70672656 | None:intergenic | 45.0% | |
| TGAGACGACACTGTCATTCT+TGG | - | chr3_2:70672637-70672656 | Msa0421640:CDS | 45.0% | |
| GAGACGACACTGTCATTCTT+GGG | - | chr3_2:70672638-70672657 | Msa0421640:CDS | 45.0% | |
| AGACGACACTGTCATTCTTG+GGG | - | chr3_2:70672639-70672658 | Msa0421640:CDS | 45.0% | |
| TATGTAGAGTAGGGCTGTTC+TGG | - | chr3_2:70672700-70672719 | Msa0421640:CDS | 45.0% | |
| ATGTAGAGTAGGGCTGTTCT+GGG | - | chr3_2:70672701-70672720 | Msa0421640:CDS | 45.0% | |
| TAAGGTGGGATTGAATTGGG+TGG | + | chr3_2:70672741-70672760 | None:intergenic | 45.0% | |
| TGGAGTTGTTCGACATATGG+TGG | - | chr3_2:70672800-70672819 | Msa0421640:CDS | 45.0% | |
| GGAACTGTTGTATCGTTTGG+AGG | - | chr3_2:70672887-70672906 | Msa0421640:CDS | 45.0% | |
| CCACAAACACGACAAACATG+AGG | + | chr3_2:70672939-70672958 | None:intergenic | 45.0% | |
| CCTCATGTTTGTCGTGTTTG+TGG | - | chr3_2:70672936-70672955 | Msa0421640:CDS | 45.0% | |
| ATGTTTGTCGTGTTTGTGGG+AGG | - | chr3_2:70672940-70672959 | Msa0421640:CDS | 45.0% | |
| GCCAAACCATACCCAACTTT+AGG | + | chr3_2:70673140-70673159 | None:intergenic | 45.0% | |
| GTTTGGCTGATGAGCTGAAA+CGG | - | chr3_2:70673153-70673172 | Msa0421640:intron | 45.0% | |
| TTTGGCTGATGAGCTGAAAC+GGG | - | chr3_2:70673154-70673173 | Msa0421640:intron | 45.0% | |
| AATGCAATATCCGCAGCTTG+CGG | + | chr3_2:70673212-70673231 | None:intergenic | 45.0% | |
| !! | GGATATGATGGATCATAGGC+GGG | - | chr3_2:70673247-70673266 | Msa0421640:intron | 45.0% |
| ! | GCAGTGATGGAGTCTTGAAA+AGG | - | chr3_2:70673369-70673388 | Msa0421640:intron | 45.0% |
| !!! | CTGCCGATACTGCTTTTTCT+TGG | - | chr3_2:70673393-70673412 | Msa0421640:intron | 45.0% |
| !!! | CGATACTGCTTTTTCTTGGG+AGG | - | chr3_2:70673397-70673416 | Msa0421640:intron | 45.0% |
| !!! | GGAGGATATTTTGATGGGGA+AGG | - | chr3_2:70673415-70673434 | Msa0421640:intron | 45.0% |
| !! | CTGTATCGGTTGTGGAAAAC+TGG | - | chr3_2:70673450-70673469 | Msa0421640:intron | 45.0% |
| GTGGACATATAACCCAGAAG+TGG | - | chr3_2:70673502-70673521 | Msa0421640:intron | 45.0% | |
| GATGACTACAAGGATGACAG+AGG | - | chr3_2:70673608-70673627 | Msa0421640:intron | 45.0% | |
| TCGGAGTCTAATTTCCACCA+AGG | + | chr3_2:70673635-70673654 | None:intergenic | 45.0% | |
| AGTGAACCTGAGATTCGTTC+CGG | + | chr3_2:70671961-70671980 | None:intergenic | 45.0% | |
| AGAATGACAGTGTCGTCTCA+AGG | + | chr3_2:70672637-70672656 | None:intergenic | 45.0% | |
| TGAGACGACACTGTCATTCT+TGG | - | chr3_2:70672637-70672656 | Msa0421640:CDS | 45.0% | |
| GAGACGACACTGTCATTCTT+GGG | - | chr3_2:70672638-70672657 | Msa0421640:CDS | 45.0% | |
| AGACGACACTGTCATTCTTG+GGG | - | chr3_2:70672639-70672658 | Msa0421640:CDS | 45.0% | |
| TATGTAGAGTAGGGCTGTTC+TGG | - | chr3_2:70672700-70672719 | Msa0421640:CDS | 45.0% | |
| ATGTAGAGTAGGGCTGTTCT+GGG | - | chr3_2:70672701-70672720 | Msa0421640:CDS | 45.0% | |
| TAAGGTGGGATTGAATTGGG+TGG | + | chr3_2:70672741-70672760 | None:intergenic | 45.0% | |
| TGGAGTTGTTCGACATATGG+TGG | - | chr3_2:70672800-70672819 | Msa0421640:CDS | 45.0% | |
| GGAACTGTTGTATCGTTTGG+AGG | - | chr3_2:70672887-70672906 | Msa0421640:CDS | 45.0% | |
| CCACAAACACGACAAACATG+AGG | + | chr3_2:70672939-70672958 | None:intergenic | 45.0% | |
| CCTCATGTTTGTCGTGTTTG+TGG | - | chr3_2:70672936-70672955 | Msa0421640:CDS | 45.0% | |
| ATGTTTGTCGTGTTTGTGGG+AGG | - | chr3_2:70672940-70672959 | Msa0421640:CDS | 45.0% | |
| GCCAAACCATACCCAACTTT+AGG | + | chr3_2:70673140-70673159 | None:intergenic | 45.0% | |
| GTTTGGCTGATGAGCTGAAA+CGG | - | chr3_2:70673153-70673172 | Msa0421640:intron | 45.0% | |
| TTTGGCTGATGAGCTGAAAC+GGG | - | chr3_2:70673154-70673173 | Msa0421640:intron | 45.0% | |
| AATGCAATATCCGCAGCTTG+CGG | + | chr3_2:70673212-70673231 | None:intergenic | 45.0% | |
| !! | GGATATGATGGATCATAGGC+GGG | - | chr3_2:70673247-70673266 | Msa0421640:intron | 45.0% |
| ! | GCAGTGATGGAGTCTTGAAA+AGG | - | chr3_2:70673369-70673388 | Msa0421640:intron | 45.0% |
| !!! | CTGCCGATACTGCTTTTTCT+TGG | - | chr3_2:70673393-70673412 | Msa0421640:intron | 45.0% |
| !!! | CGATACTGCTTTTTCTTGGG+AGG | - | chr3_2:70673397-70673416 | Msa0421640:intron | 45.0% |
| !!! | GGAGGATATTTTGATGGGGA+AGG | - | chr3_2:70673415-70673434 | Msa0421640:intron | 45.0% |
| !! | CTGTATCGGTTGTGGAAAAC+TGG | - | chr3_2:70673450-70673469 | Msa0421640:intron | 45.0% |
| GTGGACATATAACCCAGAAG+TGG | - | chr3_2:70673502-70673521 | Msa0421640:intron | 45.0% | |
| GATGACTACAAGGATGACAG+AGG | - | chr3_2:70673608-70673627 | Msa0421640:intron | 45.0% | |
| TCGGAGTCTAATTTCCACCA+AGG | + | chr3_2:70673635-70673654 | None:intergenic | 45.0% | |
| ACGGCAAGAAAGGGATCTCA+CGG | + | chr3_2:70671903-70671922 | None:intergenic | 50.0% | |
| ACGAAAGGATTTCACGGCGA+CGG | + | chr3_2:70671922-70671941 | None:intergenic | 50.0% | |
| CACTGTCATTCTTGGGGTCA+CGG | - | chr3_2:70672645-70672664 | Msa0421640:CDS | 50.0% | |
| TTGGGGTCACGGAAGGATTT+CGG | - | chr3_2:70672656-70672675 | Msa0421640:CDS | 50.0% | |
| GGGGGACATTGCTAAAAGTG+TGG | + | chr3_2:70672839-70672858 | None:intergenic | 50.0% | |
| TCGTGAGAGGAGGAAAGAAC+AGG | - | chr3_2:70672866-70672885 | Msa0421640:CDS | 50.0% | |
| ATGAGCGTGAGCATGCGAAA+AGG | - | chr3_2:70673009-70673028 | Msa0421640:intron | 50.0% | |
| ATCGGCTAGAGGGAGTAGAA+AGG | - | chr3_2:70673046-70673065 | Msa0421640:intron | 50.0% | |
| !! | TCATAGGCGGGTTGAGTGTT+TGG | - | chr3_2:70673259-70673278 | Msa0421640:intron | 50.0% |
| TTTGATGGGGAAGGCGAAGA+AGG | - | chr3_2:70673424-70673443 | Msa0421640:intron | 50.0% | |
| ACAAGGATGACAGAGGTCCT+TGG | - | chr3_2:70673615-70673634 | Msa0421640:intron | 50.0% | |
| ACGGCAAGAAAGGGATCTCA+CGG | + | chr3_2:70671903-70671922 | None:intergenic | 50.0% | |
| ACGAAAGGATTTCACGGCGA+CGG | + | chr3_2:70671922-70671941 | None:intergenic | 50.0% | |
| CACTGTCATTCTTGGGGTCA+CGG | - | chr3_2:70672645-70672664 | Msa0421640:CDS | 50.0% | |
| TTGGGGTCACGGAAGGATTT+CGG | - | chr3_2:70672656-70672675 | Msa0421640:CDS | 50.0% | |
| GGGGGACATTGCTAAAAGTG+TGG | + | chr3_2:70672839-70672858 | None:intergenic | 50.0% | |
| TCGTGAGAGGAGGAAAGAAC+AGG | - | chr3_2:70672866-70672885 | Msa0421640:CDS | 50.0% | |
| ATGAGCGTGAGCATGCGAAA+AGG | - | chr3_2:70673009-70673028 | Msa0421640:intron | 50.0% | |
| ATCGGCTAGAGGGAGTAGAA+AGG | - | chr3_2:70673046-70673065 | Msa0421640:intron | 50.0% | |
| !! | TCATAGGCGGGTTGAGTGTT+TGG | - | chr3_2:70673259-70673278 | Msa0421640:intron | 50.0% |
| TTTGATGGGGAAGGCGAAGA+AGG | - | chr3_2:70673424-70673443 | Msa0421640:intron | 50.0% | |
| ACAAGGATGACAGAGGTCCT+TGG | - | chr3_2:70673615-70673634 | Msa0421640:intron | 50.0% | |
| AAGAAAGGGATCTCACGGCG+GGG | + | chr3_2:70671898-70671917 | None:intergenic | 55.0% | |
| CAAGAAAGGGATCTCACGGC+GGG | + | chr3_2:70671899-70671918 | None:intergenic | 55.0% | |
| GCAAGAAAGGGATCTCACGG+CGG | + | chr3_2:70671900-70671919 | None:intergenic | 55.0% | |
| TTCACGGCGACGGCAAGAAA+GGG | + | chr3_2:70671912-70671931 | None:intergenic | 55.0% | |
| TTTCACGGCGACGGCAAGAA+AGG | + | chr3_2:70671913-70671932 | None:intergenic | 55.0% | |
| GTGGCGACAGCAACAACGAA+AGG | + | chr3_2:70671937-70671956 | None:intergenic | 55.0% | |
| GTCATTCTTGGGGTCACGGA+AGG | - | chr3_2:70672649-70672668 | Msa0421640:CDS | 55.0% | |
| TCCTCTCACGAACAACGTGG+GGG | + | chr3_2:70672857-70672876 | None:intergenic | 55.0% | |
| CTCCTCTCACGAACAACGTG+GGG | + | chr3_2:70672858-70672877 | None:intergenic | 55.0% | |
| CCTCCTCTCACGAACAACGT+GGG | + | chr3_2:70672859-70672878 | None:intergenic | 55.0% | |
| TCCTCCTCTCACGAACAACG+TGG | + | chr3_2:70672860-70672879 | None:intergenic | 55.0% | |
| AGCGTGAGCATGCGAAAAGG+CGG | - | chr3_2:70673012-70673031 | Msa0421640:intron | 55.0% | |
| CTGATGAGCTGAAACGGGCA+GGG | - | chr3_2:70673159-70673178 | Msa0421640:intron | 55.0% | |
| ! | AGCTGAAACGGGCAGGGTTT+TGG | - | chr3_2:70673165-70673184 | Msa0421640:intron | 55.0% |
| ! | GCTGAAACGGGCAGGGTTTT+GGG | - | chr3_2:70673166-70673185 | Msa0421640:intron | 55.0% |
| GTTAGATAGGCCGCAAGCTG+CGG | - | chr3_2:70673199-70673218 | Msa0421640:intron | 55.0% | |
| GGCGAAGAAGGAGGCTGTAT+CGG | - | chr3_2:70673436-70673455 | Msa0421640:intron | 55.0% | |
| !! | GAAGGAGGCTGTATCGGTTG+TGG | - | chr3_2:70673442-70673461 | Msa0421640:intron | 55.0% |
| AGGATGACAGAGGTCCTTGG+TGG | - | chr3_2:70673618-70673637 | Msa0421640:intron | 55.0% | |
| AAGAAAGGGATCTCACGGCG+GGG | + | chr3_2:70671898-70671917 | None:intergenic | 55.0% | |
| CAAGAAAGGGATCTCACGGC+GGG | + | chr3_2:70671899-70671918 | None:intergenic | 55.0% | |
| GCAAGAAAGGGATCTCACGG+CGG | + | chr3_2:70671900-70671919 | None:intergenic | 55.0% | |
| TTCACGGCGACGGCAAGAAA+GGG | + | chr3_2:70671912-70671931 | None:intergenic | 55.0% | |
| TTTCACGGCGACGGCAAGAA+AGG | + | chr3_2:70671913-70671932 | None:intergenic | 55.0% | |
| GTGGCGACAGCAACAACGAA+AGG | + | chr3_2:70671937-70671956 | None:intergenic | 55.0% | |
| GTCATTCTTGGGGTCACGGA+AGG | - | chr3_2:70672649-70672668 | Msa0421640:CDS | 55.0% | |
| TCCTCTCACGAACAACGTGG+GGG | + | chr3_2:70672857-70672876 | None:intergenic | 55.0% | |
| CTCCTCTCACGAACAACGTG+GGG | + | chr3_2:70672858-70672877 | None:intergenic | 55.0% | |
| CCTCCTCTCACGAACAACGT+GGG | + | chr3_2:70672859-70672878 | None:intergenic | 55.0% | |
| TCCTCCTCTCACGAACAACG+TGG | + | chr3_2:70672860-70672879 | None:intergenic | 55.0% | |
| AGCGTGAGCATGCGAAAAGG+CGG | - | chr3_2:70673012-70673031 | Msa0421640:intron | 55.0% | |
| CTGATGAGCTGAAACGGGCA+GGG | - | chr3_2:70673159-70673178 | Msa0421640:intron | 55.0% | |
| ! | AGCTGAAACGGGCAGGGTTT+TGG | - | chr3_2:70673165-70673184 | Msa0421640:intron | 55.0% |
| ! | GCTGAAACGGGCAGGGTTTT+GGG | - | chr3_2:70673166-70673185 | Msa0421640:intron | 55.0% |
| GTTAGATAGGCCGCAAGCTG+CGG | - | chr3_2:70673199-70673218 | Msa0421640:intron | 55.0% | |
| GGCGAAGAAGGAGGCTGTAT+CGG | - | chr3_2:70673436-70673455 | Msa0421640:intron | 55.0% | |
| !! | GAAGGAGGCTGTATCGGTTG+TGG | - | chr3_2:70673442-70673461 | Msa0421640:intron | 55.0% |
| AGGATGACAGAGGTCCTTGG+TGG | - | chr3_2:70673618-70673637 | Msa0421640:intron | 55.0% | |
| ACCTGAGATTCGTTCCGGCG+TGG | + | chr3_2:70671956-70671975 | None:intergenic | 60.0% | |
| TCCCCCACGTTGTTCGTGAG+AGG | - | chr3_2:70672853-70672872 | Msa0421640:CDS | 60.0% | |
| CCCACGTTGTTCGTGAGAGG+AGG | - | chr3_2:70672856-70672875 | Msa0421640:CDS | 60.0% | |
| GCTGATGAGCTGAAACGGGC+AGG | - | chr3_2:70673158-70673177 | Msa0421640:intron | 60.0% | |
| GATGGGGAAGGCGAAGAAGG+AGG | - | chr3_2:70673427-70673446 | Msa0421640:intron | 60.0% | |
| ACCTGAGATTCGTTCCGGCG+TGG | + | chr3_2:70671956-70671975 | None:intergenic | 60.0% | |
| TCCCCCACGTTGTTCGTGAG+AGG | - | chr3_2:70672853-70672872 | Msa0421640:CDS | 60.0% | |
| CCCACGTTGTTCGTGAGAGG+AGG | - | chr3_2:70672856-70672875 | Msa0421640:CDS | 60.0% | |
| GCTGATGAGCTGAAACGGGC+AGG | - | chr3_2:70673158-70673177 | Msa0421640:intron | 60.0% | |
| GATGGGGAAGGCGAAGAAGG+AGG | - | chr3_2:70673427-70673446 | Msa0421640:intron | 60.0% | |
| CTCACGGCGGGGTGAGAGAA+TGG | + | chr3_2:70671887-70671906 | None:intergenic | 65.0% | |
| CGTTGTTGCTGTCGCCACGC+CGG | - | chr3_2:70671939-70671958 | Msa0421640:CDS | 65.0% | |
| GCCACGCCGGAACGAATCTC+AGG | - | chr3_2:70671952-70671971 | Msa0421640:CDS | 65.0% | |
| CTCACGGCGGGGTGAGAGAA+TGG | + | chr3_2:70671887-70671906 | None:intergenic | 65.0% | |
| CGTTGTTGCTGTCGCCACGC+CGG | - | chr3_2:70671939-70671958 | Msa0421640:CDS | 65.0% | |
| GCCACGCCGGAACGAATCTC+AGG | - | chr3_2:70671952-70671971 | Msa0421640:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 70671881 | 70673679 | 70671881 | ID=Msa0421640;Name=Msa0421640 |
| chr3_2 | mRNA | 70671881 | 70673679 | 70671881 | ID=Msa0421640-mRNA-1;Parent=Msa0421640;Name=Msa0421640-mRNA-1;_AED=0.15;_eAED=0.19;_QI=0|0|0|1|0.5|0.66|3|0|404 |
| chr3_2 | exon | 70673621 | 70673679 | 70673621 | ID=Msa0421640-mRNA-1:exon:17039;Parent=Msa0421640-mRNA-1 |
| chr3_2 | exon | 70673084 | 70673141 | 70673084 | ID=Msa0421640-mRNA-1:exon:17038;Parent=Msa0421640-mRNA-1 |
| chr3_2 | exon | 70671881 | 70672978 | 70671881 | ID=Msa0421640-mRNA-1:exon:17037;Parent=Msa0421640-mRNA-1 |
| chr3_2 | CDS | 70673621 | 70673679 | 70673621 | ID=Msa0421640-mRNA-1:cds;Parent=Msa0421640-mRNA-1 |
| chr3_2 | CDS | 70673084 | 70673141 | 70673084 | ID=Msa0421640-mRNA-1:cds;Parent=Msa0421640-mRNA-1 |
| chr3_2 | CDS | 70671881 | 70672978 | 70671881 | ID=Msa0421640-mRNA-1:cds;Parent=Msa0421640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
