AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0518030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0518030 MtrunA17_Chr3g0130691 98.485 396 6 0 1 396 517 912 0.0 807
Msa0518030 MtrunA17_Chr2g0293101 34.097 349 218 8 1 343 506 848 2.39e-55 196
Msa0518030 MtrunA17_Chr5g0409111 38.019 313 170 7 1 304 425 722 5.60e-55 195
Msa0518030 MtrunA17_Chr2g0293111 35.526 304 187 6 1 301 506 803 5.72e-54 192
Msa0518030 MtrunA17_Chr5g0423841 35.526 304 165 9 5 292 518 806 2.27e-50 181
Msa0518030 MtrunA17_Chr1g0209901 32.905 389 204 14 5 361 521 884 1.74e-49 179
Msa0518030 MtrunA17_Chr1g0209911 32.440 373 206 13 5 348 520 875 7.47e-45 166
Msa0518030 MtrunA17_Chr7g0256191 26.165 279 181 7 1 254 578 856 1.92e-18 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0518030 AT5G63840.2 73.684 399 99 2 1 396 553 948 0.0 630
Msa0518030 AT5G63840.1 73.684 399 99 2 1 396 526 921 0.0 630
Msa0518030 AT3G23640.2 34.000 350 206 6 1 340 359 693 4.25e-59 207
Msa0518030 AT3G23640.1 34.000 350 206 6 1 340 359 693 4.25e-59 207
Msa0518030 AT3G23640.3 34.000 350 206 6 1 340 428 762 5.73e-59 207
Msa0518030 AT1G68560.1 32.808 381 217 12 5 362 507 871 8.32e-52 186
Msa0518030 AT5G11720.1 35.117 299 186 6 1 296 498 791 2.33e-51 185
Msa0518030 AT3G45940.1 32.044 362 196 11 1 343 455 785 1.11e-48 177

Find 149 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCGGCTTGTTTAGTGATTT+AGG 0.187733 3_4:-69826717 Msa0518030:three_prime_UTR
TTGCTTCACTATAAAATTTC+GGG 0.191702 3_4:+69829576 None:intergenic
AACTGGTAGTGGAAAATATT+TGG 0.205694 3_4:-69826832 Msa0518030:three_prime_UTR
GAGCTTACTATCCTTTCTTT+AGG 0.210300 3_4:-69828903 Msa0518030:CDS
TGTAGCCTACGGACTTAATT+TGG 0.212816 3_4:-69826650 Msa0518030:three_prime_UTR
CTGAATAATGTGTAGTAATA+TGG 0.225988 3_4:+69828239 None:intergenic
GTTGCTTCACTATAAAATTT+CGG 0.240046 3_4:+69829575 None:intergenic
TTCCTGTGGCCCGTCCATTA+TGG 0.250007 3_4:-69828196 Msa0518030:CDS
CATATTACTACACATTATTC+AGG 0.265304 3_4:-69828238 Msa0518030:CDS
TCAAATTAGTTAGTTAGTTC+TGG 0.273411 3_4:-69826527 Msa0518030:three_prime_UTR
CCTAGAGATGCCTTACATTA+TGG 0.279850 3_4:-69829371 Msa0518030:CDS
ATTGATGATGGCAGCAGTTT+TGG 0.281278 3_4:-69827154 Msa0518030:CDS
AGCTTACTATCCTTTCTTTA+GGG 0.283037 3_4:-69828902 Msa0518030:CDS
GCGGCTTGTTTAGTGATTTA+GGG 0.286677 3_4:-69826716 Msa0518030:three_prime_UTR
CGGGTCATTGTGGGTGAATT+CGG 0.301373 3_4:+69829595 None:intergenic
TAGCAATGATGAAGCTTTCA+TGG 0.309226 3_4:-69828144 Msa0518030:CDS
GTCAAAGGTATGGTGCAATT+TGG 0.316892 3_4:-69829217 Msa0518030:CDS
AGACGAGAACCATGGTTGTT+TGG 0.320713 3_4:-69828856 Msa0518030:CDS
GTAGACCTGGCACCTACTTC+TGG 0.321946 3_4:-69827070 Msa0518030:CDS
GACGAGAACCATGGTTGTTT+GGG 0.347906 3_4:-69828855 Msa0518030:intron
TGTACACAGTTCCAGTTCTT+AGG 0.349932 3_4:+69827927 None:intergenic
TGCACCATACCTTTGACTTC+CGG 0.354799 3_4:+69829223 None:intergenic
AATAAAACGTCTATGGATAA+AGG 0.361986 3_4:+69827117 None:intergenic
TATAGAACTTGGACCGCTTT+GGG 0.372987 3_4:-69826939 Msa0518030:CDS
CAATTCACCTTCAGCTGCTT+GGG 0.373119 3_4:+69827180 None:intergenic
TTTATAGTGAAGCAACTTGT+TGG 0.380073 3_4:-69829568 Msa0518030:intron
GACTGGAACTTCGCCGAAAC+CGG 0.383800 3_4:+69827819 None:intergenic
CCTTAGAGTTTCAGTTCCTA+TGG 0.386371 3_4:-69829165 Msa0518030:CDS
CCATAGGAACTGAAACTCTA+AGG 0.387748 3_4:+69829165 None:intergenic
ATATAGAACTTGGACCGCTT+TGG 0.389077 3_4:-69826940 Msa0518030:CDS
AAGGATAGTAAGCTCCTAAC+TGG 0.391124 3_4:+69828911 None:intergenic
GAAGTTCAACTGCAAAAGTT+AGG 0.397348 3_4:-69826789 Msa0518030:three_prime_UTR
TGTGGGTGAATTCGGCATAA+TGG 0.401725 3_4:+69829603 None:intergenic
CGGGAGTTGCATAATGCCTA+TGG 0.401865 3_4:-69829335 Msa0518030:CDS
CAAAAGGTTGATATAGAACT+TGG 0.414307 3_4:-69826950 Msa0518030:CDS
TAACGAGGAAGGACCGGTTT+CGG 0.415029 3_4:-69827832 Msa0518030:CDS
GATGGGAATTCCATCCATAA+TGG 0.417412 3_4:+69828182 None:intergenic
CCGGTCCTTCCTCGTTAGAA+TGG 0.422717 3_4:+69827838 None:intergenic
TTAGAATGGTTCCAGCTCTC+TGG 0.423790 3_4:+69827852 None:intergenic
TTGTCAAGAGCATTGTTTGC+CGG 0.430107 3_4:-69829242 Msa0518030:CDS
TGGCGATAACTCTGCCGATT+GGG 0.437132 3_4:-69829192 Msa0518030:CDS
GAATCCGGATCCTGAGTTAT+TGG 0.438991 3_4:-69828944 Msa0518030:CDS
TTGGTCCGCTGGTACCAGTT+AGG 0.441983 3_4:-69828925 Msa0518030:CDS
ATCTTCTGCAACACGGACAT+TGG 0.445693 3_4:+69826874 None:intergenic
ACAATTCACCTTCAGCTGCT+TGG 0.446099 3_4:+69827179 None:intergenic
TCTTCTGCAACACGGACATT+GGG 0.451085 3_4:+69826875 None:intergenic
CAGATAGACTGATGCATGCT+TGG 0.457658 3_4:+69827973 None:intergenic
ATTAAGTCCGTAGGCTACAT+TGG 0.463411 3_4:+69826654 None:intergenic
TCGTGGTATGACCTAAGAAC+TGG 0.466818 3_4:-69827938 Msa0518030:CDS
AATGCTCTTGACAAAACAAA+TGG 0.469678 3_4:+69829251 None:intergenic
TGAATAATGTGTAGTAATAT+GGG 0.470573 3_4:+69828240 None:intergenic
ATAAAATTTCGGGTCATTGT+GGG 0.472447 3_4:+69829586 None:intergenic
CTAAAAGTAGTTTCATCAGA+TGG 0.473918 3_4:+69828164 None:intergenic
CGATACGTTGCTACAATTGT+CGG 0.478310 3_4:-69829631 Msa0518030:five_prime_UTR
TTATGGAGGTGTGGAACATC+GGG 0.480881 3_4:-69829354 Msa0518030:CDS
TATAAAATTTCGGGTCATTG+TGG 0.484624 3_4:+69829585 None:intergenic
AGGGGTGACACACAAGTTAG+AGG 0.486618 3_4:-69827900 Msa0518030:CDS
TTGGACCGCTTTGGGTTCAA+AGG 0.486769 3_4:-69826931 Msa0518030:CDS
TTCAGGGAGGCTAACACTAC+TGG 0.488005 3_4:-69828221 Msa0518030:CDS
TTCCACATGGCAACATCTGA+AGG 0.489273 3_4:-69829305 Msa0518030:CDS
CATCCAATGTTGTTATTGAG+AGG 0.489862 3_4:-69827030 Msa0518030:CDS
CAACTGCAAAAGTTAGGATA+AGG 0.490396 3_4:-69826783 Msa0518030:three_prime_UTR
AACTCTAAGGTGATCCCAAT+CGG 0.496052 3_4:+69829178 None:intergenic
AAGAACTGGAACTGTGTACA+AGG 0.497857 3_4:-69827924 Msa0518030:CDS
TTCCACACCTCCATAATGTA+AGG 0.497951 3_4:+69829361 None:intergenic
ATGATGAAGCTTTCATGGTC+GGG 0.502509 3_4:-69828139 Msa0518030:CDS
CTGGCGATAACTCTGCCGAT+TGG 0.505985 3_4:-69829193 Msa0518030:CDS
CCATTCTAACGAGGAAGGAC+CGG 0.510010 3_4:-69827838 Msa0518030:CDS
GGGCTATTGAAGCGTGGTGA+AGG 0.510307 3_4:-69829284 Msa0518030:CDS
ATCCATAATGGACGGGCCAC+AGG 0.511367 3_4:+69828194 None:intergenic
TTGATAAACACTGTGTTTAG+CGG 0.511372 3_4:-69826472 Msa0518030:three_prime_UTR
CGGACCAATAACTCAGGATC+CGG 0.511805 3_4:+69828940 None:intergenic
CTTACCGGGATGTCATTCTC+TGG 0.513239 3_4:-69829128 Msa0518030:intron
ATGTCCGTGTTGCAGAAGAT+TGG 0.514436 3_4:-69826871 Msa0518030:CDS
GTTCCAGCTCTCTGGAAAGC+AGG 0.516788 3_4:+69827860 None:intergenic
GATTGAGCCCTCAAATCAAA+AGG 0.520485 3_4:-69826966 Msa0518030:CDS
ATTCCTGCTTTCCAGAGAGC+TGG 0.520525 3_4:-69827863 Msa0518030:CDS
CATGCATCAGTCTATCTGCC+TGG 0.521383 3_4:-69827968 Msa0518030:CDS
TAAAAGTAGTTTCATCAGAT+GGG 0.521520 3_4:+69828165 None:intergenic
AGAAAAGAAGTCTTGAAGAA+TGG 0.523378 3_4:-69826760 Msa0518030:three_prime_UTR
TGGACCGCTTTGGGTTCAAA+GGG 0.525605 3_4:-69826930 Msa0518030:CDS
ACGGACATTGGGTTTACGTA+TGG 0.526218 3_4:+69826886 None:intergenic
ATGCAGGTGCTGATGTTGGT+GGG 0.530016 3_4:-69828975 Msa0518030:intron
ATCCTGAGTTATTGGTCCGC+TGG 0.532185 3_4:-69828936 Msa0518030:CDS
TCTGGAATGGTCATCTGTGT+TGG 0.532740 3_4:-69826609 Msa0518030:three_prime_UTR
TATGCAGGTGCTGATGTTGG+TGG 0.533517 3_4:-69828976 Msa0518030:intron
AATCCTCTCAATAACAACAT+TGG 0.535889 3_4:+69827027 None:intergenic
CTTTATGCAGGTGCTGATGT+TGG 0.536882 3_4:-69828979 Msa0518030:intron
ATTATGGAGGTGTGGAACAT+CGG 0.537541 3_4:-69829355 Msa0518030:CDS
GAATTTGAGAGATGTATGCT+TGG 0.538948 3_4:-69826688 Msa0518030:three_prime_UTR
TAATTAGCGTCCTTGTGTCT+AGG 0.540590 3_4:-69826416 Msa0518030:three_prime_UTR
TTACGTATGGTCATGAAAGC+TGG 0.543961 3_4:+69826899 None:intergenic
TTCCACCAGAAGTAGGTGCC+AGG 0.547193 3_4:+69827065 None:intergenic
GGGATCATTTGTCATCTGAC+TGG 0.549218 3_4:+69827802 None:intergenic
CATTGTTTGCCGGAAGTCAA+AGG 0.551007 3_4:-69829232 Msa0518030:CDS
TGGGCATGGGCCCTAAAGAA+AGG 0.558231 3_4:+69828892 None:intergenic
CCATAATGTAAGGCATCTCT+AGG 0.560102 3_4:+69829371 None:intergenic
TGTGGCCCGTCCATTATGGA+TGG 0.560447 3_4:-69828192 Msa0518030:CDS
AGGTATGGTGCAATTTGGAC+TGG 0.562978 3_4:-69829212 Msa0518030:CDS
ATATTACTACACATTATTCA+GGG 0.564087 3_4:-69828237 Msa0518030:CDS
CGTTACCAAATTAAGTCCGT+AGG 0.564634 3_4:+69826645 None:intergenic
AGCGTGGTGAAGGGAAAGAC+AGG 0.566529 3_4:-69829274 Msa0518030:CDS
AATGATGAAGCTTTCATGGT+CGG 0.573210 3_4:-69828140 Msa0518030:CDS
GGCTATTGAAGCGTGGTGAA+GGG 0.573501 3_4:-69829283 Msa0518030:CDS
CTGGAACTGTGTACAAGGGA+GGG 0.575434 3_4:-69827919 Msa0518030:CDS
GAATTCCATCCATAATGGAC+GGG 0.576160 3_4:+69828187 None:intergenic
ATTGAGAGGATTATCGTGCT+AGG 0.577116 3_4:-69827016 Msa0518030:CDS
CGAACATTTCCACCAGAAGT+AGG 0.577840 3_4:+69827058 None:intergenic
GACCTGGCACCTACTTCTGG+TGG 0.580907 3_4:-69827067 Msa0518030:CDS
AGACCAAGGGTCAAAACCAT+AGG 0.581886 3_4:+69829149 None:intergenic
ATCAAATATCGTGAAATACT+CGG 0.583839 3_4:+69826490 None:intergenic
CTGAAAACCTACCAGAGTGA+AGG 0.587681 3_4:+69827781 None:intergenic
TGAAAACCTACCAGAGTGAA+GGG 0.588985 3_4:+69827782 None:intergenic
TTTGCCGGAAGTCAAAGGTA+TGG 0.592991 3_4:-69829227 Msa0518030:CDS
GGTGAATTGTACATTGATGA+TGG 0.593720 3_4:-69827166 Msa0518030:CDS
GGAATTCCATCCATAATGGA+CGG 0.594012 3_4:+69828186 None:intergenic
TCCACATGGCAACATCTGAA+GGG 0.595054 3_4:-69829304 Msa0518030:CDS
GACAAATGATCCCTTCACTC+TGG 0.595286 3_4:-69827792 Msa0518030:intron
TAACACTACTGGCGTTCCTG+TGG 0.602036 3_4:-69828210 Msa0518030:CDS
TGCCTTACATTATGGAGGTG+TGG 0.604146 3_4:-69829363 Msa0518030:CDS
GAAACTTACTTCTGTAGACC+TGG 0.604421 3_4:-69827083 Msa0518030:CDS
AATAGTTCCCAAGCAGCTGA+AGG 0.608021 3_4:-69827187 Msa0518030:CDS
GGGAGTTGCATAATGCCTAT+GGG 0.616936 3_4:-69829334 Msa0518030:CDS
ATCGTGCTAGGTCATGCTCA+TGG 0.617000 3_4:-69827004 Msa0518030:CDS
ATGACATCCCGGTAAGACCA+AGG 0.617088 3_4:+69829135 None:intergenic
CAATCCTACCCAAACAACCA+TGG 0.619331 3_4:+69828847 None:intergenic
TGGAACTGTGTACAAGGGAG+GGG 0.623142 3_4:-69827918 Msa0518030:CDS
TGTGAATCCAATGTAGCCTA+CGG 0.624723 3_4:-69826661 Msa0518030:three_prime_UTR
TGGAACCATTCTAACGAGGA+AGG 0.628066 3_4:-69827843 Msa0518030:CDS
CTGACCAGAGAATGACATCC+CGG 0.629437 3_4:+69829124 None:intergenic
CATGTGGAAGTAATACCCAT+AGG 0.636522 3_4:+69829319 None:intergenic
ACACAAGTTAGAGGTTACAG+AGG 0.640736 3_4:-69827891 Msa0518030:CDS
TGACATCCCGGTAAGACCAA+GGG 0.646199 3_4:+69829136 None:intergenic
CTATGGGTATTACTTCCACA+TGG 0.648812 3_4:-69829318 Msa0518030:CDS
GTGCACAAATACAATTTCAG+CGG 0.652338 3_4:-69826735 Msa0518030:three_prime_UTR
TTTGCCCTTTGAACCCAAAG+CGG 0.652469 3_4:+69826926 None:intergenic
ACTGGAACTGTGTACAAGGG+AGG 0.653156 3_4:-69827920 Msa0518030:CDS
ATCTGCCTGGAAAACAATCG+TGG 0.653902 3_4:-69827955 Msa0518030:CDS
TAGTCCAATCTTCTGCAACA+CGG 0.666462 3_4:+69826867 None:intergenic
TACCAGCGGACCAATAACTC+AGG 0.667995 3_4:+69828934 None:intergenic
AGAGATGCCTTACATTATGG+AGG 0.668919 3_4:-69829368 Msa0518030:CDS
GCCCTTCAGATGTTGCCATG+TGG 0.669777 3_4:+69829303 None:intergenic
AGTGCAAGGGATCTATACTG+AGG 0.691054 3_4:-69828105 Msa0518030:intron
TCTGAAGGGCTATTGAAGCG+TGG 0.698532 3_4:-69829290 Msa0518030:CDS
AAGCTCCTAACTGGTACCAG+CGG 0.704334 3_4:+69828920 None:intergenic
AGAACTGGAACTGTGTACAA+GGG 0.709398 3_4:-69827923 Msa0518030:CDS
AATGAATATACCTAGACACA+AGG 0.710297 3_4:+69826406 None:intergenic
GAGCTGGAACCATTCTAACG+AGG 0.725405 3_4:-69827847 Msa0518030:CDS
TTACTACACATTATTCAGGG+AGG 0.740218 3_4:-69828234 Msa0518030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTTTCATATAATTTAAATT+TGG - chr3_4:69826542-69826561 Msa0518030:three_prime_UTR 10.0%
!!! TACTTTTAAGCTTTTTTTTT+TGG - chr3_4:69827223-69827242 Msa0518030:intron 15.0%
!!! TATCATCAGTTTTTTTTTTT+TGG - chr3_4:69827259-69827278 Msa0518030:intron 15.0%
!! TTGAATAAGTATAAAATGAA+GGG + chr3_4:69827289-69827308 None:intergenic 15.0%
!!! ACTTTTGACTAATTTTTAAA+GGG + chr3_4:69827372-69827391 None:intergenic 15.0%
!! AAAAAAAGATCATCATAAGA+AGG + chr3_4:69826952-69826971 None:intergenic 20.0%
!! GTTGAATAAGTATAAAATGA+AGG + chr3_4:69827290-69827309 None:intergenic 20.0%
!!! CACTTTTGACTAATTTTTAA+AGG + chr3_4:69827373-69827392 None:intergenic 20.0%
!! TATATATAAGATTTGTACAG+TGG + chr3_4:69827427-69827446 None:intergenic 20.0%
!! TGAATAATGTGTAGTAATAT+GGG + chr3_4:69827807-69827826 None:intergenic 20.0%
!! ATATTACTACACATTATTCA+GGG - chr3_4:69827807-69827826 Msa0518030:CDS 20.0%
!! TTAAGAATCACAAAAAAGAA+GGG + chr3_4:69828015-69828034 None:intergenic 20.0%
!! ATTAAGAATCACAAAAAAGA+AGG + chr3_4:69828016-69828035 None:intergenic 20.0%
!!! TTTTTATAATTCGTCAATTC+TGG - chr3_4:69828041-69828060 Msa0518030:intron 20.0%
!!! TGTCAAAAAGCATATTATAT+AGG + chr3_4:69828543-69828562 None:intergenic 20.0%
!!! TAACGATAATTTTTATCATC+TGG - chr3_4:69829417-69829436 Msa0518030:intron 20.0%
!!! ATAATTTTTATCATCTGGAA+TGG - chr3_4:69829422-69829441 Msa0518030:intron 20.0%
!!! TAACTAATTTGATTTTGCAA+TGG + chr3_4:69829509-69829528 None:intergenic 20.0%
! TTGCTTCACTATAAAATTTC+GGG + chr3_4:69826471-69826490 None:intergenic 25.0%
! GTTGCTTCACTATAAAATTT+CGG + chr3_4:69826472-69826491 None:intergenic 25.0%
!!! ACTGATGATATATTGACTTT+GGG + chr3_4:69827249-69827268 None:intergenic 25.0%
!!! AACTGATGATATATTGACTT+TGG + chr3_4:69827250-69827269 None:intergenic 25.0%
!! GTCAAAAGTGATTTTATAGA+AGG - chr3_4:69827383-69827402 Msa0518030:intron 25.0%
! AGCGAAAAACAGAATTAATT+AGG - chr3_4:69827752-69827771 Msa0518030:intron 25.0%
! GCGAAAAACAGAATTAATTA+GGG - chr3_4:69827753-69827772 Msa0518030:intron 25.0%
! CTGAATAATGTGTAGTAATA+TGG + chr3_4:69827808-69827827 None:intergenic 25.0%
! CATATTACTACACATTATTC+AGG - chr3_4:69827806-69827825 Msa0518030:CDS 25.0%
! TAAAAGTAGTTTCATCAGAT+GGG + chr3_4:69827882-69827901 None:intergenic 25.0%
! AATATGGAAACAAACAGAAA+AGG + chr3_4:69828345-69828364 None:intergenic 25.0%
! CAGTAAAAAACCTAGTAATA+TGG + chr3_4:69828361-69828380 None:intergenic 25.0%
! AATCTACATAGTAGATATGT+GGG + chr3_4:69828511-69828530 None:intergenic 25.0%
! AAATCTACATAGTAGATATG+TGG + chr3_4:69828512-69828531 None:intergenic 25.0%
!! TCTACTATGTAGATTTTGAA+TGG - chr3_4:69828516-69828535 Msa0518030:intron 25.0%
!! CTACTATGTAGATTTTGAAT+GGG - chr3_4:69828517-69828536 Msa0518030:intron 25.0%
! ACTAGTTACAAAAGGTAATA+AGG + chr3_4:69828758-69828777 None:intergenic 25.0%
! AATAAAACGTCTATGGATAA+AGG + chr3_4:69828930-69828949 None:intergenic 25.0%
! TTGCAAAAATAAAACGTCTA+TGG + chr3_4:69828937-69828956 None:intergenic 25.0%
!!! AGACGTTTTATTTTTGCAAA+TGG - chr3_4:69828938-69828957 Msa0518030:CDS 25.0%
!!! GACGTTTTATTTTTGCAAAT+GGG - chr3_4:69828939-69828958 Msa0518030:CDS 25.0%
!!! ATATCAACCTTTTGATTTGA+GGG + chr3_4:69829088-69829107 None:intergenic 25.0%
!!! TATATCAACCTTTTGATTTG+AGG + chr3_4:69829089-69829108 None:intergenic 25.0%
!! GACTATCAAAATTTTGTAAC+TGG - chr3_4:69829195-69829214 Msa0518030:CDS 25.0%
! TCAAATTAGTTAGTTAGTTC+TGG - chr3_4:69829517-69829536 Msa0518030:intron 25.0%
! ATCAAATATCGTGAAATACT+CGG + chr3_4:69829557-69829576 None:intergenic 25.0%
! ATAAAATTTCGGGTCATTGT+GGG + chr3_4:69826461-69826480 None:intergenic 30.0%
! TATAAAATTTCGGGTCATTG+TGG + chr3_4:69826462-69826481 None:intergenic 30.0%
TTTATAGTGAAGCAACTTGT+TGG - chr3_4:69826476-69826495 Msa0518030:three_prime_UTR 30.0%
! TACTTTTAATGACTGTGCAT+TGG - chr3_4:69826597-69826616 Msa0518030:three_prime_UTR 30.0%
TGATTGTTTACATTGTATCC+AGG - chr3_4:69826642-69826661 Msa0518030:three_prime_UTR 30.0%
AATGCTCTTGACAAAACAAA+TGG + chr3_4:69826796-69826815 None:intergenic 30.0%
ATTCTTCTCATATTCAGAGT+CGG - chr3_4:69826974-69826993 Msa0518030:CDS 30.0%
AGCTTACTATCCTTTCTTTA+GGG - chr3_4:69827142-69827161 Msa0518030:CDS 30.0%
TTTATAGAAGGACTTTACCA+AGG - chr3_4:69827395-69827414 Msa0518030:intron 30.0%
TTATAGAAGGACTTTACCAA+GGG - chr3_4:69827396-69827415 Msa0518030:intron 30.0%
ACAATTCAGGATCCATTTAA+CGG + chr3_4:69827672-69827691 None:intergenic 30.0%
CTAAAAGTAGTTTCATCAGA+TGG + chr3_4:69827883-69827902 None:intergenic 30.0%
!!! TATTTTTCAGGGGAAACATA+TGG + chr3_4:69828312-69828331 None:intergenic 30.0%
!! CAAGAACAAGTATTTTTCAG+GGG + chr3_4:69828322-69828341 None:intergenic 30.0%
! GCAAGAACAAGTATTTTTCA+GGG + chr3_4:69828323-69828342 None:intergenic 30.0%
CTGTTTGTTTCCATATTACT+AGG - chr3_4:69828348-69828367 Msa0518030:intron 30.0%
TACTGTTGAGTTTCTATTCA+TGG - chr3_4:69828376-69828395 Msa0518030:intron 30.0%
AACATCCATATTGTCAACAA+AGG + chr3_4:69828402-69828421 None:intergenic 30.0%
!! GACAATTTTAGTCTGATTGA+AGG - chr3_4:69828559-69828578 Msa0518030:intron 30.0%
!!! CAAATGACTTTTTTCTTGCT+AGG + chr3_4:69828643-69828662 None:intergenic 30.0%
AACTCAATCATACAGAATAC+AGG + chr3_4:69828714-69828733 None:intergenic 30.0%
TGTATTCTGTATGATTGAGT+TGG - chr3_4:69828713-69828732 Msa0518030:intron 30.0%
GTATTCTGTATGATTGAGTT+GGG - chr3_4:69828714-69828733 Msa0518030:intron 30.0%
TAACTGTCACTAGTTACAAA+AGG + chr3_4:69828766-69828785 None:intergenic 30.0%
TTTGTAACTAGTGACAGTTA+TGG - chr3_4:69828766-69828785 Msa0518030:intron 30.0%
! GATTATTATGGTTCTGTGTT+TGG - chr3_4:69828819-69828838 Msa0518030:intron 30.0%
AATCCTCTCAATAACAACAT+TGG + chr3_4:69829020-69829039 None:intergenic 30.0%
!! CAAAAGGTTGATATAGAACT+TGG - chr3_4:69829094-69829113 Msa0518030:intron 30.0%
! CAAAATTTTGTAACTGGTAG+TGG - chr3_4:69829201-69829220 Msa0518030:CDS 30.0%
!! AACTGGTAGTGGAAAATATT+TGG - chr3_4:69829212-69829231 Msa0518030:CDS 30.0%
AGAAAAGAAGTCTTGAAGAA+TGG - chr3_4:69829284-69829303 Msa0518030:CDS 30.0%
TTGATAAACACTGTGTTTAG+CGG - chr3_4:69829572-69829591 Msa0518030:five_prime_UTR 30.0%
GAGCTTACTATCCTTTCTTT+AGG - chr3_4:69827141-69827160 Msa0518030:CDS 35.0%
CTTAATGGCAAGGAAAGTAA+TGG + chr3_4:69827340-69827359 None:intergenic 35.0%
AAAGGGAAAACAGCTCTTAA+TGG + chr3_4:69827355-69827374 None:intergenic 35.0%
AAGTGCAAACTAGTATCACA+AGG - chr3_4:69827494-69827513 Msa0518030:intron 35.0%
GGAAATACAGTAGGTAAGTA+TGG + chr3_4:69827644-69827663 None:intergenic 35.0%
TATTTCCCTTGACCGTTAAA+TGG - chr3_4:69827657-69827676 Msa0518030:intron 35.0%
TAAATGGATCCTGAATTGTG+TGG - chr3_4:69827673-69827692 Msa0518030:intron 35.0%
AAATGGATCCTGAATTGTGT+GGG - chr3_4:69827674-69827693 Msa0518030:intron 35.0%
TTACTACACATTATTCAGGG+AGG - chr3_4:69827810-69827829 Msa0518030:CDS 35.0%
TAGCAATGATGAAGCTTTCA+TGG - chr3_4:69827900-69827919 Msa0518030:CDS 35.0%
AATGATGAAGCTTTCATGGT+CGG - chr3_4:69827904-69827923 Msa0518030:CDS 35.0%
! GGCAAGAACAAGTATTTTTC+AGG + chr3_4:69828324-69828343 None:intergenic 35.0%
ATGGGATGCAACAAATGAAA+AGG + chr3_4:69828677-69828696 None:intergenic 35.0%
! GCTCGGTGATAAGATTATTA+TGG - chr3_4:69828807-69828826 Msa0518030:intron 35.0%
GGTGAATTGTACATTGATGA+TGG - chr3_4:69828878-69828897 Msa0518030:CDS 35.0%
!!! AGCAGTTTTGGTTTTCTAGA+AGG - chr3_4:69828902-69828921 Msa0518030:CDS 35.0%
! CATCCAATGTTGTTATTGAG+AGG - chr3_4:69829014-69829033 Msa0518030:intron 35.0%
GAAGTTCAACTGCAAAAGTT+AGG - chr3_4:69829255-69829274 Msa0518030:CDS 35.0%
CAACTGCAAAAGTTAGGATA+AGG - chr3_4:69829261-69829280 Msa0518030:CDS 35.0%
GTGCACAAATACAATTTCAG+CGG - chr3_4:69829309-69829328 Msa0518030:CDS 35.0%
GAATTTGAGAGATGTATGCT+TGG - chr3_4:69829356-69829375 Msa0518030:CDS 35.0%
!! TAGTGAAGCAACTTGTTGGT+TGG - chr3_4:69826480-69826499 Msa0518030:three_prime_UTR 40.0%
GAAGTGAAGAGTCAGAATTG+CGG + chr3_4:69826516-69826535 None:intergenic 40.0%
! CCATAATGTAAGGCATCTCT+AGG + chr3_4:69826676-69826695 None:intergenic 40.0%
CCTAGAGATGCCTTACATTA+TGG - chr3_4:69826673-69826692 Msa0518030:three_prime_UTR 40.0%
AGAGATGCCTTACATTATGG+AGG - chr3_4:69826676-69826695 Msa0518030:three_prime_UTR 40.0%
TTCCACACCTCCATAATGTA+AGG + chr3_4:69826686-69826705 None:intergenic 40.0%
! ATTATGGAGGTGTGGAACAT+CGG - chr3_4:69826689-69826708 Msa0518030:three_prime_UTR 40.0%
CATGTGGAAGTAATACCCAT+AGG + chr3_4:69826728-69826747 None:intergenic 40.0%
CTATGGGTATTACTTCCACA+TGG - chr3_4:69826726-69826745 Msa0518030:three_prime_UTR 40.0%
!! TTGTCAAGAGCATTGTTTGC+CGG - chr3_4:69826802-69826821 Msa0518030:three_prime_UTR 40.0%
! GTCAAAGGTATGGTGCAATT+TGG - chr3_4:69826827-69826846 Msa0518030:three_prime_UTR 40.0%
!! AACTCTAAGGTGATCCCAAT+CGG + chr3_4:69826869-69826888 None:intergenic 40.0%
CCATAGGAACTGAAACTCTA+AGG + chr3_4:69826882-69826901 None:intergenic 40.0%
CCTTAGAGTTTCAGTTCCTA+TGG - chr3_4:69826879-69826898 Msa0518030:CDS 40.0%
ACGTTTCATGACCTTTATGC+AGG - chr3_4:69827053-69827072 Msa0518030:CDS 40.0%
!!! CTGATGTTGGTGGGTTTTTT+GGG - chr3_4:69827078-69827097 Msa0518030:CDS 40.0%
AAGGATAGTAAGCTCCTAAC+TGG + chr3_4:69827136-69827155 None:intergenic 40.0%
! TCGTCTTTTTGTGTCGTGAT+GGG + chr3_4:69827174-69827193 None:intergenic 40.0%
ACACAAAAAGACGAGAACCA+TGG - chr3_4:69827180-69827199 Msa0518030:CDS 40.0%
GAAAACAGCTCTTAATGGCA+AGG + chr3_4:69827350-69827369 None:intergenic 40.0%
! ACTCGTGAAGTTGTGGTTTT+TGG + chr3_4:69827529-69827548 None:intergenic 40.0%
AGTGTAAACTCGTGAAGTTG+TGG + chr3_4:69827536-69827555 None:intergenic 40.0%
AGGATCCATTTAACGGTCAA+GGG + chr3_4:69827665-69827684 None:intergenic 40.0%
AACAGATTCCCACACAATTC+AGG + chr3_4:69827685-69827704 None:intergenic 40.0%
!! GAATTCCATCCATAATGGAC+GGG + chr3_4:69827860-69827879 None:intergenic 40.0%
! GGAATTCCATCCATAATGGA+CGG + chr3_4:69827861-69827880 None:intergenic 40.0%
GATGGGAATTCCATCCATAA+TGG + chr3_4:69827865-69827884 None:intergenic 40.0%
ATGATGAAGCTTTCATGGTC+GGG - chr3_4:69827905-69827924 Msa0518030:CDS 40.0%
!!! GGAGCAGTATTTTAGTGCAA+GGG - chr3_4:69827926-69827945 Msa0518030:CDS 40.0%
! TCATACCACGATTGTTTTCC+AGG + chr3_4:69828097-69828116 None:intergenic 40.0%
TGTACACAGTTCCAGTTCTT+AGG + chr3_4:69828120-69828139 None:intergenic 40.0%
AAGAACTGGAACTGTGTACA+AGG - chr3_4:69828120-69828139 Msa0518030:CDS 40.0%
AGAACTGGAACTGTGTACAA+GGG - chr3_4:69828121-69828140 Msa0518030:CDS 40.0%
ACACAAGTTAGAGGTTACAG+AGG - chr3_4:69828153-69828172 Msa0518030:CDS 40.0%
TGAAAACCTACCAGAGTGAA+GGG + chr3_4:69828265-69828284 None:intergenic 40.0%
CATGGCCTTTGTTGACAATA+TGG - chr3_4:69828394-69828413 Msa0518030:intron 40.0%
AGTTGAATCCTGATGCTTCT+TGG - chr3_4:69828428-69828447 Msa0518030:intron 40.0%
TGCAAAACATATTCTCGTCC+TGG + chr3_4:69828472-69828491 None:intergenic 40.0%
GTTGCATCCCATCCAAAAAA+TGG - chr3_4:69828685-69828704 Msa0518030:intron 40.0%
!!! GAATACAGGCAGCCATTTTT+TGG + chr3_4:69828700-69828719 None:intergenic 40.0%
!! GAGTAGTCTACTAGTTTGCT+CGG - chr3_4:69828790-69828809 Msa0518030:intron 40.0%
! ATTATGGTTCTGTGTTTGGC+AGG - chr3_4:69828823-69828842 Msa0518030:intron 40.0%
!!! ATTGATGATGGCAGCAGTTT+TGG - chr3_4:69828890-69828909 Msa0518030:CDS 40.0%
GAAACTTACTTCTGTAGACC+TGG - chr3_4:69828961-69828980 Msa0518030:CDS 40.0%
ATTGAGAGGATTATCGTGCT+AGG - chr3_4:69829028-69829047 Msa0518030:intron 40.0%
GATTGAGCCCTCAAATCAAA+AGG - chr3_4:69829078-69829097 Msa0518030:intron 40.0%
ATATAGAACTTGGACCGCTT+TGG - chr3_4:69829104-69829123 Msa0518030:intron 40.0%
TATAGAACTTGGACCGCTTT+GGG - chr3_4:69829105-69829124 Msa0518030:intron 40.0%
TTACGTATGGTCATGAAAGC+TGG + chr3_4:69829148-69829167 None:intergenic 40.0%
TAGTCCAATCTTCTGCAACA+CGG + chr3_4:69829180-69829199 None:intergenic 40.0%
! AGCGGCTTGTTTAGTGATTT+AGG - chr3_4:69829327-69829346 Msa0518030:CDS 40.0%
! GCGGCTTGTTTAGTGATTTA+GGG - chr3_4:69829328-69829347 Msa0518030:CDS 40.0%
TGTGAATCCAATGTAGCCTA+CGG - chr3_4:69829383-69829402 Msa0518030:exon 40.0%
ATTAAGTCCGTAGGCTACAT+TGG + chr3_4:69829393-69829412 None:intergenic 40.0%
TGTAGCCTACGGACTTAATT+TGG - chr3_4:69829394-69829413 Msa0518030:intron 40.0%
CGTTACCAAATTAAGTCCGT+AGG + chr3_4:69829402-69829421 None:intergenic 40.0%
TGTGGGTGAATTCGGCATAA+TGG + chr3_4:69826444-69826463 None:intergenic 45.0%
GTCACTTGAGAAGAAGAGCT+TGG - chr3_4:69826564-69826583 Msa0518030:three_prime_UTR 45.0%
AGAAGAAGAGCTTGGATCTG+TGG - chr3_4:69826572-69826591 Msa0518030:three_prime_UTR 45.0%
GAAGAAGAGCTTGGATCTGT+GGG - chr3_4:69826573-69826592 Msa0518030:three_prime_UTR 45.0%
TGCCTTACATTATGGAGGTG+TGG - chr3_4:69826681-69826700 Msa0518030:three_prime_UTR 45.0%
! TTATGGAGGTGTGGAACATC+GGG - chr3_4:69826690-69826709 Msa0518030:three_prime_UTR 45.0%
GGGAGTTGCATAATGCCTAT+GGG - chr3_4:69826710-69826729 Msa0518030:three_prime_UTR 45.0%
TTCCACATGGCAACATCTGA+AGG - chr3_4:69826739-69826758 Msa0518030:three_prime_UTR 45.0%
TCCACATGGCAACATCTGAA+GGG - chr3_4:69826740-69826759 Msa0518030:three_prime_UTR 45.0%
CATTGTTTGCCGGAAGTCAA+AGG - chr3_4:69826812-69826831 Msa0518030:three_prime_UTR 45.0%
TTTGCCGGAAGTCAAAGGTA+TGG - chr3_4:69826817-69826836 Msa0518030:three_prime_UTR 45.0%
! TGCACCATACCTTTGACTTC+CGG + chr3_4:69826824-69826843 None:intergenic 45.0%
AGGTATGGTGCAATTTGGAC+TGG - chr3_4:69826832-69826851 Msa0518030:three_prime_UTR 45.0%
!!! GTTCCTATGGTTTTGACCCT+TGG - chr3_4:69826892-69826911 Msa0518030:CDS 45.0%
AGACCAAGGGTCAAAACCAT+AGG + chr3_4:69826898-69826917 None:intergenic 45.0%
!!! GTTTTGACCCTTGGTCTTAC+CGG - chr3_4:69826901-69826920 Msa0518030:CDS 45.0%
!!! TTTTGACCCTTGGTCTTACC+GGG - chr3_4:69826902-69826921 Msa0518030:CDS 45.0%
CAACATCAGCACCTGCATAA+AGG + chr3_4:69827067-69827086 None:intergenic 45.0%
!! CTTTATGCAGGTGCTGATGT+TGG - chr3_4:69827065-69827084 Msa0518030:CDS 45.0%
!!! GCTGATGTTGGTGGGTTTTT+TGG - chr3_4:69827077-69827096 Msa0518030:CDS 45.0%
!!! TGGTGGGTTTTTTGGGAATC+CGG - chr3_4:69827085-69827104 Msa0518030:CDS 45.0%
GAATCCGGATCCTGAGTTAT+TGG - chr3_4:69827100-69827119 Msa0518030:CDS 45.0%
!!! TTTTGTGTCGTGATGGGCAT+GGG + chr3_4:69827168-69827187 None:intergenic 45.0%
!!! TTTTTGTGTCGTGATGGGCA+TGG + chr3_4:69827169-69827188 None:intergenic 45.0%
! CTCGTCTTTTTGTGTCGTGA+TGG + chr3_4:69827175-69827194 None:intergenic 45.0%
AGACGAGAACCATGGTTGTT+TGG - chr3_4:69827188-69827207 Msa0518030:CDS 45.0%
GACGAGAACCATGGTTGTTT+GGG - chr3_4:69827189-69827208 Msa0518030:CDS 45.0%
AGAACCATGGTTGTTTGGGT+AGG - chr3_4:69827193-69827212 Msa0518030:CDS 45.0%
CAATCCTACCCAAACAACCA+TGG + chr3_4:69827200-69827219 None:intergenic 45.0%
TTGTACAGTGGTTCATCCCT+TGG + chr3_4:69827415-69827434 None:intergenic 45.0%
ACGGTCAAGGGAAATACAGT+AGG + chr3_4:69827653-69827672 None:intergenic 45.0%
CAGGATCCATTTAACGGTCA+AGG + chr3_4:69827666-69827685 None:intergenic 45.0%
!!! GGGAGCAGTATTTTAGTGCA+AGG - chr3_4:69827925-69827944 Msa0518030:CDS 45.0%
AGTGCAAGGGATCTATACTG+AGG - chr3_4:69827939-69827958 Msa0518030:CDS 45.0%
CAGATAGACTGATGCATGCT+TGG + chr3_4:69828074-69828093 None:intergenic 45.0%
ATCTGCCTGGAAAACAATCG+TGG - chr3_4:69828089-69828108 Msa0518030:intron 45.0%
TCGTGGTATGACCTAAGAAC+TGG - chr3_4:69828106-69828125 Msa0518030:CDS 45.0%
TTAGAATGGTTCCAGCTCTC+TGG + chr3_4:69828195-69828214 None:intergenic 45.0%
TGGAACCATTCTAACGAGGA+AGG - chr3_4:69828201-69828220 Msa0518030:CDS 45.0%
GGGATCATTTGTCATCTGAC+TGG + chr3_4:69828245-69828264 None:intergenic 45.0%
GACAAATGATCCCTTCACTC+TGG - chr3_4:69828252-69828271 Msa0518030:CDS 45.0%
AATGATCCCTTCACTCTGGT+AGG - chr3_4:69828256-69828275 Msa0518030:CDS 45.0%
CTGAAAACCTACCAGAGTGA+AGG + chr3_4:69828266-69828285 None:intergenic 45.0%
! CTTCACTCTGGTAGGTTTTC+AGG - chr3_4:69828264-69828283 Msa0518030:CDS 45.0%
!!! CAGGCAGCCATTTTTTGGAT+GGG + chr3_4:69828695-69828714 None:intergenic 45.0%
!!! ACAGGCAGCCATTTTTTGGA+TGG + chr3_4:69828696-69828715 None:intergenic 45.0%
AATAGTTCCCAAGCAGCTGA+AGG - chr3_4:69828857-69828876 Msa0518030:CDS 45.0%
CAATTCACCTTCAGCTGCTT+GGG + chr3_4:69828867-69828886 None:intergenic 45.0%
ACAATTCACCTTCAGCTGCT+TGG + chr3_4:69828868-69828887 None:intergenic 45.0%
CGAACATTTCCACCAGAAGT+AGG + chr3_4:69828989-69829008 None:intergenic 45.0%
TTTGCCCTTTGAACCCAAAG+CGG + chr3_4:69829121-69829140 None:intergenic 45.0%
ACGGACATTGGGTTTACGTA+TGG + chr3_4:69829161-69829180 None:intergenic 45.0%
TCTTCTGCAACACGGACATT+GGG + chr3_4:69829172-69829191 None:intergenic 45.0%
ATCTTCTGCAACACGGACAT+TGG + chr3_4:69829173-69829192 None:intergenic 45.0%
ATGTCCGTGTTGCAGAAGAT+TGG - chr3_4:69829173-69829192 Msa0518030:CDS 45.0%
! TCTGGAATGGTCATCTGTGT+TGG - chr3_4:69829435-69829454 Msa0518030:intron 45.0%
CGGGTCATTGTGGGTGAATT+CGG + chr3_4:69826452-69826471 None:intergenic 50.0%
AGAGTCAGAATTGCGGACAC+AGG + chr3_4:69826509-69826528 None:intergenic 50.0%
! CATCTCTAGGCATTGTCACC+TGG + chr3_4:69826663-69826682 None:intergenic 50.0%
CGGGAGTTGCATAATGCCTA+TGG - chr3_4:69826709-69826728 Msa0518030:three_prime_UTR 50.0%
TCTGAAGGGCTATTGAAGCG+TGG - chr3_4:69826754-69826773 Msa0518030:three_prime_UTR 50.0%
GGCTATTGAAGCGTGGTGAA+GGG - chr3_4:69826761-69826780 Msa0518030:three_prime_UTR 50.0%
! TGGCGATAACTCTGCCGATT+GGG - chr3_4:69826852-69826871 Msa0518030:exon 50.0%
TGACATCCCGGTAAGACCAA+GGG + chr3_4:69826911-69826930 None:intergenic 50.0%
ATGACATCCCGGTAAGACCA+AGG + chr3_4:69826912-69826931 None:intergenic 50.0%
CTTACCGGGATGTCATTCTC+TGG - chr3_4:69826916-69826935 Msa0518030:CDS 50.0%
CTGACCAGAGAATGACATCC+CGG + chr3_4:69826923-69826942 None:intergenic 50.0%
!! TATGCAGGTGCTGATGTTGG+TGG - chr3_4:69827068-69827087 Msa0518030:CDS 50.0%
!! ATGCAGGTGCTGATGTTGGT+GGG - chr3_4:69827069-69827088 Msa0518030:CDS 50.0%
CGGACCAATAACTCAGGATC+CGG + chr3_4:69827107-69827126 None:intergenic 50.0%
ATCCTGAGTTATTGGTCCGC+TGG - chr3_4:69827108-69827127 Msa0518030:CDS 50.0%
TACCAGCGGACCAATAACTC+AGG + chr3_4:69827113-69827132 None:intergenic 50.0%
AAGCTCCTAACTGGTACCAG+CGG + chr3_4:69827127-69827146 None:intergenic 50.0%
! AGACTTTTCCCCACATGCTC+AGG - chr3_4:69827559-69827578 Msa0518030:intron 50.0%
! GACTTTTCCCCACATGCTCA+GGG - chr3_4:69827560-69827579 Msa0518030:intron 50.0%
! ACTTTTCCCCACATGCTCAG+GGG - chr3_4:69827561-69827580 Msa0518030:intron 50.0%
TTCAGGGAGGCTAACACTAC+TGG - chr3_4:69827823-69827842 Msa0518030:CDS 50.0%
TAACACTACTGGCGTTCCTG+TGG - chr3_4:69827834-69827853 Msa0518030:CDS 50.0%
CATGCATCAGTCTATCTGCC+TGG - chr3_4:69828076-69828095 Msa0518030:intron 50.0%
ACTGGAACTGTGTACAAGGG+AGG - chr3_4:69828124-69828143 Msa0518030:CDS 50.0%
CTGGAACTGTGTACAAGGGA+GGG - chr3_4:69828125-69828144 Msa0518030:CDS 50.0%
TGGAACTGTGTACAAGGGAG+GGG - chr3_4:69828126-69828145 Msa0518030:CDS 50.0%
AGGGGTGACACACAAGTTAG+AGG - chr3_4:69828144-69828163 Msa0518030:CDS 50.0%
ATTCCTGCTTTCCAGAGAGC+TGG - chr3_4:69828181-69828200 Msa0518030:CDS 50.0%
GAGCTGGAACCATTCTAACG+AGG - chr3_4:69828197-69828216 Msa0518030:CDS 50.0%
CCATTCTAACGAGGAAGGAC+CGG - chr3_4:69828206-69828225 Msa0518030:CDS 50.0%
! TAACGAGGAAGGACCGGTTT+CGG - chr3_4:69828212-69828231 Msa0518030:CDS 50.0%
!! GCATGATGCCAAGAAGCATC+AGG + chr3_4:69828439-69828458 None:intergenic 50.0%
GATGTACACACATGCAGGCA+CGG + chr3_4:69828621-69828640 None:intergenic 50.0%
GCTAGGATGTACACACATGC+AGG + chr3_4:69828626-69828645 None:intergenic 50.0%
!! TTGAGTTGGGAAATGCTGCG+TGG - chr3_4:69828727-69828746 Msa0518030:intron 50.0%
ATCGTGCTAGGTCATGCTCA+TGG - chr3_4:69829040-69829059 Msa0518030:intron 50.0%
! TTGGACCGCTTTGGGTTCAA+AGG - chr3_4:69829113-69829132 Msa0518030:intron 50.0%
! TGGACCGCTTTGGGTTCAAA+GGG - chr3_4:69829114-69829133 Msa0518030:intron 50.0%
GCCCTTCAGATGTTGCCATG+TGG + chr3_4:69826744-69826763 None:intergenic 55.0%
GGGCTATTGAAGCGTGGTGA+AGG - chr3_4:69826760-69826779 Msa0518030:three_prime_UTR 55.0%
AGCGTGGTGAAGGGAAAGAC+AGG - chr3_4:69826770-69826789 Msa0518030:three_prime_UTR 55.0%
CTGGCGATAACTCTGCCGAT+TGG - chr3_4:69826851-69826870 Msa0518030:exon 55.0%
TTGGTCCGCTGGTACCAGTT+AGG - chr3_4:69827119-69827138 Msa0518030:CDS 55.0%
TGGGCATGGGCCCTAAAGAA+AGG + chr3_4:69827155-69827174 None:intergenic 55.0%
! CTTTTCCCCACATGCTCAGG+GGG - chr3_4:69827562-69827581 Msa0518030:intron 55.0%
! TTTTCCCCACATGCTCAGGG+GGG - chr3_4:69827563-69827582 Msa0518030:intron 55.0%
TTAACCCCCCTGAGCATGTG+GGG + chr3_4:69827570-69827589 None:intergenic 55.0%
CTTAACCCCCCTGAGCATGT+GGG + chr3_4:69827571-69827590 None:intergenic 55.0%
ACTTAACCCCCCTGAGCATG+TGG + chr3_4:69827572-69827591 None:intergenic 55.0%
TTCCTGTGGCCCGTCCATTA+TGG - chr3_4:69827848-69827867 Msa0518030:CDS 55.0%
!! ATCCATAATGGACGGGCCAC+AGG + chr3_4:69827853-69827872 None:intergenic 55.0%
TGTGGCCCGTCCATTATGGA+TGG - chr3_4:69827852-69827871 Msa0518030:CDS 55.0%
! GTTCCAGCTCTCTGGAAAGC+AGG + chr3_4:69828187-69828206 None:intergenic 55.0%
CCGGTCCTTCCTCGTTAGAA+TGG + chr3_4:69828209-69828228 None:intergenic 55.0%
GACTGGAACTTCGCCGAAAC+CGG + chr3_4:69828228-69828247 None:intergenic 55.0%
CATCATGCCTTCAGCAGTCC+AGG - chr3_4:69828451-69828470 Msa0518030:intron 55.0%
TTCTCGTCCTGGACTGCTGA+AGG + chr3_4:69828461-69828480 None:intergenic 55.0%
GTAGACCTGGCACCTACTTC+TGG - chr3_4:69828974-69828993 Msa0518030:intron 55.0%
TTCCACCAGAAGTAGGTGCC+AGG + chr3_4:69828982-69829001 None:intergenic 55.0%
GACCTGGCACCTACTTCTGG+TGG - chr3_4:69828977-69828996 Msa0518030:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 69826416 69829650 69826416 ID=Msa0518030;Name=Msa0518030
chr3_4 mRNA 69826416 69829650 69826416 ID=Msa0518030-mRNA-1;Parent=Msa0518030;Name=Msa0518030-mRNA-1;_AED=0.00;_eAED=0.00;_QI=88|1|1|1|0.8|0.66|6|437|396
chr3_4 exon 69826416 69827221 69826416 ID=Msa0518030-mRNA-1:exon:18685;Parent=Msa0518030-mRNA-1
chr3_4 exon 69827793 69827999 69827793 ID=Msa0518030-mRNA-1:exon:18684;Parent=Msa0518030-mRNA-1
chr3_4 exon 69828106 69828316 69828106 ID=Msa0518030-mRNA-1:exon:18683;Parent=Msa0518030-mRNA-1
chr3_4 exon 69828856 69828991 69828856 ID=Msa0518030-mRNA-1:exon:18682;Parent=Msa0518030-mRNA-1
chr3_4 exon 69829129 69829402 69829129 ID=Msa0518030-mRNA-1:exon:18681;Parent=Msa0518030-mRNA-1
chr3_4 exon 69829569 69829650 69829569 ID=Msa0518030-mRNA-1:exon:18680;Parent=Msa0518030-mRNA-1
chr3_4 five_prime_UTR 69829569 69829650 69829569 ID=Msa0518030-mRNA-1:five_prime_utr;Parent=Msa0518030-mRNA-1
chr3_4 five_prime_UTR 69829397 69829402 69829397 ID=Msa0518030-mRNA-1:five_prime_utr;Parent=Msa0518030-mRNA-1
chr3_4 CDS 69829129 69829396 69829129 ID=Msa0518030-mRNA-1:cds;Parent=Msa0518030-mRNA-1
chr3_4 CDS 69828856 69828991 69828856 ID=Msa0518030-mRNA-1:cds;Parent=Msa0518030-mRNA-1
chr3_4 CDS 69828106 69828316 69828106 ID=Msa0518030-mRNA-1:cds;Parent=Msa0518030-mRNA-1
chr3_4 CDS 69827793 69827999 69827793 ID=Msa0518030-mRNA-1:cds;Parent=Msa0518030-mRNA-1
chr3_4 CDS 69826853 69827221 69826853 ID=Msa0518030-mRNA-1:cds;Parent=Msa0518030-mRNA-1
chr3_4 three_prime_UTR 69826416 69826852 69826416 ID=Msa0518030-mRNA-1:three_prime_utr;Parent=Msa0518030-mRNA-1
Gene Sequence

>Msa0518030

ATGCCTAGAGATGCCTTACATTATGGAGGTGTGGAACATCGGGAGTTGCATAATGCCTATGGGTATTACTTCCACATGGCAACATCTGAAGGGCTATTGAAGCGTGGTGAAGGGAAAGACAGGCCATTTGTTTTGTCAAGAGCATTGTTTGCCGGAAGTCAAAGGTATGGTGCAATTTGGACTGGCGATAACTCTGCCGATTGGGATCACCTTAGAGTTTCAGTTCCTATGGTTTTGACCCTTGGTCTTACCGGGATGTCATTCTCTGGTGCTGATGTTGGTGGGTTTTTTGGGAATCCGGATCCTGAGTTATTGGTCCGCTGGTACCAGTTAGGAGCTTACTATCCTTTCTTTAGGGCCCATGCCCATCACGACACAAAAAGACGAGAACCATGGTTGTTTGGAGAGCGAAAAACAGAATTAATTAGGGATGCTATACATGTTCGTTATGCACTTCTCCCATATTACTACACATTATTCAGGGAGGCTAACACTACTGGCGTTCCTGTGGCCCGTCCATTATGGATGGAATTCCCATCTGATGAAACTACTTTTAGCAATGATGAAGCTTTCATGGTCGGGAGCAGTATTTTAGTGCAAGGGATCTATACTGAGCGTGCCAAGCATGCATCAGTCTATCTGCCTGGAAAACAATCGTGGTATGACCTAAGAACTGGAACTGTGTACAAGGGAGGGGTGACACACAAGTTAGAGGTTACAGAGGAGAGCATTCCTGCTTTCCAGAGAGCTGGAACCATTCTAACGAGGAAGGACCGGTTTCGGCGAAGTTCCAGTCAGATGACAAATGATCCCTTCACTCTGGTTGTAGCTCTGAATAGTTCCCAAGCAGCTGAAGGTGAATTGTACATTGATGATGGCAGCAGTTTTGGTTTTCTAGAAGGTGCCTTTATCCATAGACGTTTTATTTTTGCAAATGGGAAACTTACTTCTGTAGACCTGGCACCTACTTCTGGTGGAAATGTTCGTCATACATCCAATGTTGTTATTGAGAGGATTATCGTGCTAGGTCATGCTCATGGCTCAAAGAATGCACTGATTGAGCCCTCAAATCAAAAGGTTGATATAGAACTTGGACCGCTTTGGGTTCAAAGGGCAAATTCACCAGCTTTCATGACCATACGTAAACCCAATGTCCGTGTTGCAGAAGATTGGACTATCAAAATTTTGTAA

Protein sequence

>Msa0518030

MPRDALHYGGVEHRELHNAYGYYFHMATSEGLLKRGEGKDRPFVLSRALFAGSQRYGAIWTGDNSADWDHLRVSVPMVLTLGLTGMSFSGADVGGFFGNPDPELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERKTELIRDAIHVRYALLPYYYTLFREANTTGVPVARPLWMEFPSDETTFSNDEAFMVGSSILVQGIYTERAKHASVYLPGKQSWYDLRTGTVYKGGVTHKLEVTEESIPAFQRAGTILTRKDRFRRSSSQMTNDPFTLVVALNSSQAAEGELYIDDGSSFGFLEGAFIHRRFIFANGKLTSVDLAPTSGGNVRHTSNVVIERIIVLGHAHGSKNALIEPSNQKVDIELGPLWVQRANSPAFMTIRKPNVRVAEDWTIKIL*