AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0423320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0423320 MtrunA17_Chr3g0123951 98.361 366 6 0 1 366 1 366 0.0 752
Msa0423320 MtrunA17_Chr8g0382161 86.501 363 49 0 1 363 1 363 0.0 662
Msa0423320 MtrunA17_Chr3g0133061 30.347 346 190 10 23 360 584 886 2.75e-37 143
Msa0423320 MtrunA17_Chr6g0458421 28.531 354 192 9 17 360 23 325 2.45e-35 135
Msa0423320 MtrunA17_Chr4g0074041 30.205 341 194 10 24 360 93 393 5.17e-35 136
Msa0423320 MtrunA17_Chr6g0458441 28.933 356 188 10 17 360 121 423 5.57e-35 135
Msa0423320 MtrunA17_Chr5g0411271 29.855 345 182 10 24 360 155 447 7.38e-35 135
Msa0423320 MtrunA17_Chr5g0427301 31.481 324 186 10 23 340 542 835 1.09e-34 135
Msa0423320 MtrunA17_Chr6g0458431 27.954 347 189 9 24 360 95 390 1.72e-32 128
Msa0423320 MtrunA17_Chr1g0150541 29.781 319 186 8 24 334 182 470 2.24e-31 125
Msa0423320 MtrunA17_Chr1g0149991 29.539 369 186 14 16 340 176 514 7.37e-31 123
Msa0423320 MtrunA17_Chr5g0412381 29.102 323 190 8 23 338 424 714 2.85e-30 122
Msa0423320 MtrunA17_Chr2g0312901 27.746 346 211 8 23 365 22 331 3.72e-29 119
Msa0423320 MtrunA17_Chr2g0313171 30.172 348 187 12 24 360 465 767 1.78e-28 117
Msa0423320 MtrunA17_Chr1g0148321 30.696 316 169 9 24 330 108 382 3.02e-28 116
Msa0423320 MtrunA17_Chr3g0138791 30.794 315 170 11 24 330 108 382 2.07e-25 108
Msa0423320 MtrunA17_Chr8g0366721 26.744 344 185 10 24 360 213 496 1.11e-24 105
Msa0423320 MtrunA17_Chr4g0020741 27.100 369 221 13 24 363 183 532 6.50e-22 97.1
Msa0423320 MtrunA17_Chr5g0439971 27.187 320 181 9 22 330 203 481 1.06e-21 97.1
Msa0423320 MtrunA17_Chr1g0170261 26.415 318 182 8 24 330 202 478 3.07e-21 95.5
Msa0423320 MtrunA17_Chr4g0064671 27.459 244 112 5 169 360 13 243 5.14e-21 91.3
Msa0423320 MtrunA17_Chr8g0365831 24.928 349 199 13 24 360 165 462 2.51e-19 89.4
Msa0423320 MtrunA17_Chr7g0255591 33.129 163 87 5 208 363 754 901 2.52e-16 80.9
Msa0423320 MtrunA17_Chr4g0062491 25.000 312 167 11 64 360 32 291 6.04e-15 75.1
Msa0423320 MtrunA17_Chr2g0322211 27.234 235 141 8 137 364 652 863 1.01e-14 75.9
Msa0423320 MtrunA17_Chr4g0062561 24.138 348 190 12 24 360 254 538 2.85e-14 74.3
Msa0423320 MtrunA17_Chr7g0267641 29.778 225 127 10 153 363 730 937 2.92e-14 74.3
Msa0423320 MtrunA17_Chr1g0189101 29.091 165 96 5 208 366 765 914 3.43e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0423320 AT2G22310.1 82.418 364 61 2 1 363 1 362 0.0 629
Msa0423320 AT4G39910.1 81.471 367 64 3 1 363 1 367 0.0 624
Msa0423320 AT2G22310.3 81.763 329 57 2 36 363 4 330 0.0 561
Msa0423320 AT2G22310.2 81.846 325 56 2 40 363 3 325 0.0 555
Msa0423320 AT4G24560.1 28.280 343 199 10 24 360 543 844 4.27e-36 140
Msa0423320 AT5G57990.1 29.070 344 193 13 24 360 108 407 7.67e-34 133
Msa0423320 AT3G14400.1 28.530 347 211 7 23 365 24 337 2.48e-32 128
Msa0423320 AT5G65450.2 30.063 316 181 10 23 330 348 631 2.03e-31 125
Msa0423320 AT5G65450.1 29.747 316 182 9 23 330 329 612 2.55e-31 125
Msa0423320 AT4G31670.1 28.213 319 191 10 24 334 169 457 1.17e-30 123
Msa0423320 AT2G24640.2 27.900 319 192 9 24 334 5 293 3.05e-28 115
Msa0423320 AT2G24640.1 27.900 319 192 9 24 334 175 463 3.62e-28 116
Msa0423320 AT1G17110.3 28.161 348 194 12 24 360 439 741 7.03e-27 112
Msa0423320 AT1G17110.1 28.161 348 194 12 24 360 439 741 7.03e-27 112
Msa0423320 AT1G17110.2 28.161 348 194 12 24 360 443 745 7.45e-27 112
Msa0423320 AT4G17895.1 29.014 355 176 12 24 360 177 473 4.30e-25 107
Msa0423320 AT3G49600.2 28.707 317 173 10 24 330 107 380 3.16e-24 105
Msa0423320 AT3G49600.1 28.707 317 173 10 24 330 107 380 3.16e-24 105
Msa0423320 AT3G49600.3 28.707 317 173 10 24 330 107 380 4.14e-24 104
Msa0423320 AT5G46740.1 28.696 345 196 10 24 360 164 466 1.86e-22 99.4
Msa0423320 AT3G11910.3 26.822 343 197 10 22 351 197 498 1.23e-20 94.4
Msa0423320 AT3G11910.1 26.822 343 197 10 22 351 197 498 1.23e-20 94.4
Msa0423320 AT3G11910.4 26.822 343 197 10 22 351 196 497 1.28e-20 94.4
Msa0423320 AT3G11910.2 26.822 343 197 10 22 351 196 497 1.28e-20 94.4
Msa0423320 AT5G06600.1 26.027 365 203 12 22 360 198 521 1.64e-20 94.0
Msa0423320 AT5G06600.2 26.027 365 203 12 22 360 197 520 1.97e-20 93.6
Msa0423320 AT5G06600.3 26.027 365 203 12 22 360 198 521 2.15e-20 93.6
Msa0423320 AT5G10790.2 24.737 380 200 11 15 339 42 390 1.13e-18 87.4
Msa0423320 AT5G10790.1 24.474 380 201 11 15 339 171 519 2.93e-18 86.7
Msa0423320 AT5G46740.2 28.405 257 139 7 110 360 40 257 2.74e-16 80.5
Msa0423320 AT5G22030.2 30.723 166 94 6 204 363 761 911 9.71e-14 73.2
Msa0423320 AT5G22030.1 30.723 166 94 6 204 363 719 869 1.04e-13 73.2
Msa0423320 AT2G40930.1 31.250 160 88 6 208 360 769 913 1.22e-13 72.8
Msa0423320 AT2G40930.2 31.250 160 88 6 208 360 769 913 1.22e-13 72.8
Msa0423320 AT4G10590.4 31.325 166 93 6 204 363 744 894 8.06e-12 67.4
Msa0423320 AT4G10590.3 31.325 166 93 6 204 363 744 894 8.06e-12 67.4
Msa0423320 AT4G10590.1 31.325 166 93 6 204 363 744 894 8.06e-12 67.4
Msa0423320 AT4G10590.2 31.325 166 93 6 204 363 744 894 8.06e-12 67.4
Msa0423320 AT4G10570.1 31.325 166 93 6 204 363 745 895 1.08e-11 67.0
Msa0423320 AT1G32850.1 29.651 172 96 7 203 366 729 883 2.46e-11 65.9

Find 101 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCAGTGCAGACATTCTT+TGG 0.226632 3_2:-73069625 Msa0423320:CDS
TCACACCTGTCTTCCTCTTC+TGG 0.239068 3_2:+73071813 None:intergenic
TGATCAATTCAACGCGCTTA+TGG 0.265342 3_2:-73073844 Msa0423320:exon
GAACAATTGCTACAATATTA+TGG 0.282416 3_2:-73072911 Msa0423320:CDS
GAAAACAAGGGTTTGGTTGC+AGG 0.295988 3_2:+73073955 None:intergenic
AAATGAACTTGTTGACATTC+TGG 0.297380 3_2:-73070934 Msa0423320:CDS
CAACCTCTGTACAAATCGTT+TGG 0.322213 3_2:+73071784 None:intergenic
CCAAAGTAATGTTCTCCTTC+AGG 0.328815 3_2:+73073777 None:intergenic
TACTTTGGCCTCGAGAATTT+CGG 0.330275 3_2:-73073762 Msa0423320:CDS
TTTCACCGACAATGTGTTCA+TGG 0.344301 3_2:-73069261 Msa0423320:three_prime_UTR
TTCACAACCGTATCCTTTCC+AGG 0.348662 3_2:+73069405 None:intergenic
ACAACAAATCAACCGAATAA+TGG 0.350760 3_2:-73073916 Msa0423320:five_prime_UTR
GCAGAAAATTGAGAGGTTTA+CGG 0.360263 3_2:+73074000 None:intergenic
CAAAACATAACCAGTGGTTA+TGG 0.364423 3_2:+73069677 None:intergenic
CACCTCAAGCAGCTTGAATA+GGG 0.371228 3_2:+73069436 None:intergenic
ACACCTCAAGCAGCTTGAAT+AGG 0.376767 3_2:+73069435 None:intergenic
TTGCAAGCACCTTGTCTCAT+TGG 0.376816 3_2:+73070502 None:intergenic
TTGCAGTAGTTGTCCATGTT+GGG 0.380146 3_2:-73069741 Msa0423320:CDS
CCATTAGCTAAACCACTCTT+TGG 0.383199 3_2:+73070843 None:intergenic
AGCAGCTTGAATAGGGAAAA+TGG 0.388505 3_2:+73069443 None:intergenic
GATCAATTCAACGCGCTTAT+GGG 0.389504 3_2:-73073843 Msa0423320:exon
CTTCAGTGCAGACATTCTTT+GGG 0.391927 3_2:-73069624 Msa0423320:CDS
TGTAGCAATTGTTCTCGAAA+TGG 0.394146 3_2:+73072920 None:intergenic
AAAGAAAGAAAACAAGGGTT+TGG 0.396825 3_2:+73073948 None:intergenic
AACCTCTGTACAAATCGTTT+GGG 0.398526 3_2:+73071785 None:intergenic
AACGCGCTTATGGGTGGTTC+TGG 0.402741 3_2:-73073834 Msa0423320:exon
GGGTTTGGTTGCAGGAGAAA+TGG 0.406985 3_2:+73073963 None:intergenic
CTCCGGTTCAACTCAGTGAA+TGG 0.415224 3_2:+73073884 None:intergenic
TTCCATTCACTGAGTTGAAC+CGG 0.419523 3_2:-73073886 Msa0423320:five_prime_UTR
TGGAATCGCAGTCCATTATT+CGG 0.422546 3_2:+73073904 None:intergenic
TTGTCTTTCCCCTTGAACTC+AGG 0.435602 3_2:-73069807 Msa0423320:CDS
CACACCTGTCTTCCTCTTCT+GGG 0.437291 3_2:+73071814 None:intergenic
CGGTTGTGAAAATGTATACT+AGG 0.442107 3_2:-73069392 Msa0423320:three_prime_UTR
TATCACTCAACCTGAGTTCA+AGG 0.443968 3_2:+73069797 None:intergenic
CCTGAAGGAGAACATTACTT+TGG 0.451777 3_2:-73073777 Msa0423320:CDS
CCAAAGAGTGGTTTAGCTAA+TGG 0.456689 3_2:-73070843 Msa0423320:CDS
GAACATCAAGGCGATCTAGT+AGG 0.457073 3_2:-73074100 Msa0423320:five_prime_UTR
CAAAGTAATGTTCTCCTTCA+GGG 0.463000 3_2:+73073778 None:intergenic
AAAAGAGCCTTTAGCTACTT+GGG 0.466028 3_2:-73070814 Msa0423320:CDS
TTCCCTATTCAAGCTGCTTG+AGG 0.469530 3_2:-73069438 Msa0423320:three_prime_UTR
CATAGATCTTGTAAGTAAAA+CGG 0.469640 3_2:+73074127 None:intergenic
TTGTGCACCCAAGTAGCTAA+AGG 0.471803 3_2:+73070807 None:intergenic
TTTGCAGTAGTTGTCCATGT+TGG 0.472175 3_2:-73069742 Msa0423320:CDS
ACAAATAGTTCAAGAACTCA+TGG 0.473994 3_2:+73070958 None:intergenic
CAGACATAATGTCCGTGGTT+GGG 0.501159 3_2:+73069712 None:intergenic
GCTTGAGGTGTTATACCTCC+TGG 0.508191 3_2:-73069423 Msa0423320:three_prime_UTR
TAAATACGCGTACGTGTGTG+TGG 0.518147 3_2:-73074049 Msa0423320:five_prime_UTR
GCGATCTAGTAGGGAAATAA+CGG 0.521066 3_2:-73074090 Msa0423320:five_prime_UTR
TAGTTGTCCATGTTGGGAGT+GGG 0.524445 3_2:-73069735 Msa0423320:CDS
AACATCAAGGCGATCTAGTA+GGG 0.525605 3_2:-73074099 Msa0423320:five_prime_UTR
TCTAAACTCGAGAAGGCTCT+CGG 0.528934 3_2:-73073810 Msa0423320:CDS
AGTTCCCAGAAGAGGAAGAC+AGG 0.531654 3_2:-73071818 Msa0423320:CDS
AGAAAGAAAGAAAGAAAACA+AGG 0.537899 3_2:+73073942 None:intergenic
GTAGTTGTCCATGTTGGGAG+TGG 0.545060 3_2:-73069736 Msa0423320:CDS
GGTTGGGCCCACTCCCAACA+TGG 0.549398 3_2:+73069728 None:intergenic
TAACACCATGAACACATTGT+CGG 0.550479 3_2:+73069256 None:intergenic
GTTTGCAAGAAGCTCAGAAG+AGG 0.550711 3_2:-73069927 Msa0423320:CDS
ATCACTCAACCTGAGTTCAA+GGG 0.571357 3_2:+73069798 None:intergenic
GCAGACATAATGTCCGTGGT+TGG 0.577071 3_2:+73069711 None:intergenic
CTCCCAAACGATTTGTACAG+AGG 0.577523 3_2:-73071787 Msa0423320:CDS
TATAGATAAGTTCCCAGAAG+AGG 0.577641 3_2:-73071826 Msa0423320:intron
CTTCCGTAGCTATATGCACC+AGG 0.590612 3_2:-73071744 Msa0423320:intron
TTCTGGTTCTAAACTCGAGA+AGG 0.590698 3_2:-73073817 Msa0423320:CDS
GATCTATGTTTCGAACATCA+AGG 0.591486 3_2:-73074112 Msa0423320:five_prime_UTR
CAAATAGTTCAAGAACTCAT+GGG 0.594052 3_2:+73070959 None:intergenic
GTTGGGAGTGGGCCCAACCA+CGG 0.596385 3_2:-73069724 Msa0423320:CDS
AATGTGAAACTGTTACCGCT+AGG 0.596426 3_2:-73070481 Msa0423320:CDS
TATACCTCCTGGAAAGGATA+CGG 0.596449 3_2:-73069412 Msa0423320:three_prime_UTR
CCATTCGCAATCTTCTCAGA+AGG 0.599118 3_2:+73070867 None:intergenic
CAATTCAACGCGCTTATGGG+TGG 0.601033 3_2:-73073840 Msa0423320:exon
TTTAAGTACATGGAACAGCT+GGG 0.603531 3_2:-73069856 Msa0423320:CDS
GTACCTGGTGCATATAGCTA+CGG 0.605797 3_2:+73071741 None:intergenic
ATTGCGAATGGACCAAAGAG+TGG 0.607250 3_2:-73070855 Msa0423320:CDS
GAAAGAAAGAAAGAAAACAA+GGG 0.607288 3_2:+73073943 None:intergenic
AGGTGTTATACCTCCTGGAA+AGG 0.616671 3_2:-73069418 Msa0423320:three_prime_UTR
CGTAAAACAAAATGTAACCA+TGG 0.617281 3_2:+73069572 None:intergenic
AGATACGACAGTATACATGC+TGG 0.621357 3_2:-73069289 Msa0423320:three_prime_UTR
CTCGGCGATAATTTCCCTGA+AGG 0.623448 3_2:-73073792 Msa0423320:CDS
TCACTCAACCTGAGTTCAAG+GGG 0.625682 3_2:+73069799 None:intergenic
AAATACGCGTACGTGTGTGT+GGG 0.626278 3_2:-73074048 Msa0423320:five_prime_UTR
TTCAACAATAATACAGACCA+TGG 0.626392 3_2:-73069589 Msa0423320:CDS
CCTTCTGAGAAGATTGCGAA+TGG 0.627827 3_2:-73070867 Msa0423320:CDS
CGTCGTCAAAACATAACCAG+TGG 0.628688 3_2:+73069671 None:intergenic
ATGTGAAACTGTTACCGCTA+GGG 0.633533 3_2:-73070480 Msa0423320:CDS
CGCGTATTTATAAGTGATTG+CGG 0.634750 3_2:+73074062 None:intergenic
CAAGGCAGACATAATGTCCG+TGG 0.637860 3_2:+73069707 None:intergenic
GAAAATGTATACTAGGTGGT+TGG 0.643728 3_2:-73069385 Msa0423320:three_prime_UTR
GTAAAATGCAGAAAATTGAG+AGG 0.645211 3_2:+73073993 None:intergenic
AGATGAATGACCAAGACACG+TGG 0.653059 3_2:+73069886 None:intergenic
GATGAATGACCAAGACACGT+GGG 0.658347 3_2:+73069887 None:intergenic
ATGAATGACCAAGACACGTG+GGG 0.659217 3_2:+73069888 None:intergenic
TGACGACGAAACTGTCGAGG+TGG 0.668810 3_2:-73069656 Msa0423320:CDS
AAGTATTGCCGAAATTCTCG+AGG 0.684941 3_2:+73073754 None:intergenic
CATTAACAGAAACTAGACAG+TGG 0.687135 3_2:-73069545 Msa0423320:exon
TGAATGACCAAGACACGTGG+GGG 0.688525 3_2:+73069889 None:intergenic
GGTAAGACAGCTTCTTGTAG+CGG 0.692354 3_2:+73069833 None:intergenic
GTTCAAGGGGAAAGACAACA+CGG 0.707575 3_2:+73069812 None:intergenic
ACAGAAACTAGACAGTGGAG+AGG 0.717214 3_2:-73069540 Msa0423320:exon
ACAACCGTATCCTTTCCAGG+AGG 0.737627 3_2:+73069408 None:intergenic
GAATACTTACCAATGAGACA+AGG 0.751910 3_2:-73070511 Msa0423320:CDS
TTGTGAAAATGTATACTAGG+TGG 0.777321 3_2:-73069389 Msa0423320:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTATTTATTATATGTATT+TGG - chr3_2:73070180-73070199 Msa0423320:intron 10.0%
!! ACTATTTATTATATGTATTT+GGG - chr3_2:73070181-73070200 Msa0423320:intron 10.0%
!!! AGATTTTTAAATTTTCATTT+CGG - chr3_2:73072788-73072807 Msa0423320:intron 10.0%
!! TTAAAAAAAAGTAGTAAAAT+AGG + chr3_2:73073060-73073079 None:intergenic 10.0%
!!! ATTTTACTACTTTTTTTTAA+AGG - chr3_2:73073060-73073079 Msa0423320:intron 10.0%
!!! TTTTACTACTTTTTTTTAAA+GGG - chr3_2:73073061-73073080 Msa0423320:intron 10.0%
!! ATTAAAAACGAAAATAAAAA+AGG + chr3_2:73074031-73074050 None:intergenic 10.0%
!!! TTTACTCTAAAATAAACTTA+AGG + chr3_2:73069874-73069893 None:intergenic 15.0%
!! TATGATTATAGAATTTATAC+TGG - chr3_2:73070613-73070632 Msa0423320:intron 15.0%
!!! TCTCTTTTTTAATAATATCT+GGG + chr3_2:73070751-73070770 None:intergenic 15.0%
!! AGATATTATTAAAAAAGAGA+CGG - chr3_2:73070751-73070770 Msa0423320:intron 15.0%
!!! GTTATTTTATTTTTGTTAGA+AGG - chr3_2:73072120-73072139 Msa0423320:intron 15.0%
!!! TTTTTATTACTTTTAGTAAG+AGG - chr3_2:73073084-73073103 Msa0423320:intron 15.0%
!!! TATTTTCTAAATTCTGAATC+TGG + chr3_2:73069675-73069694 None:intergenic 20.0%
!!! ATTATTGTTTTGCTGAATTT+AGG - chr3_2:73069792-73069811 Msa0423320:CDS 20.0%
!! TTGAAACATTCATTTCATAA+TGG + chr3_2:73069935-73069954 None:intergenic 20.0%
!! ATGAAATGAATGTTTCAAAA+AGG - chr3_2:73069937-73069956 Msa0423320:intron 20.0%
!! GATAGTAAGTTGTTAAAATA+CGG - chr3_2:73070021-73070040 Msa0423320:intron 20.0%
!! ATAGTAAGTTGTTAAAATAC+GGG - chr3_2:73070022-73070041 Msa0423320:intron 20.0%
!! GAGATTATGAATATATCAAA+AGG + chr3_2:73070110-73070129 None:intergenic 20.0%
!! TTGATATATTCATAATCTCA+AGG - chr3_2:73070111-73070130 Msa0423320:intron 20.0%
!!! CTAATTTTTAGTCTTACTAT+TGG - chr3_2:73070250-73070269 Msa0423320:intron 20.0%
!! TTAAAAAGTTACTAATTTGG+TGG + chr3_2:73070702-73070721 None:intergenic 20.0%
!! TGGTTAAAAAGTTACTAATT+TGG + chr3_2:73070705-73070724 None:intergenic 20.0%
!!! CTCTTTTTTAATAATATCTG+GGG + chr3_2:73070750-73070769 None:intergenic 20.0%
!!! GTCTCTTTTTTAATAATATC+TGG + chr3_2:73070752-73070771 None:intergenic 20.0%
!! TAAAGCAGAATAATAAACAA+TGG + chr3_2:73070901-73070920 None:intergenic 20.0%
!! AAATACAATAGCTAACAAAA+AGG + chr3_2:73071122-73071141 None:intergenic 20.0%
!!! TTTTTGTTAGCTATTGTATT+TGG - chr3_2:73071121-73071140 Msa0423320:intron 20.0%
!! ATCTATATCAAGAAATAACA+TGG + chr3_2:73071514-73071533 None:intergenic 20.0%
!!! TAAAAATATTTTCTGCTCAA+GGG + chr3_2:73072015-73072034 None:intergenic 20.0%
!!! TTAAAAATATTTTCTGCTCA+AGG + chr3_2:73072016-73072035 None:intergenic 20.0%
!! TAAAGAAATACATCAATAAG+AGG + chr3_2:73072306-73072325 None:intergenic 20.0%
!!! TTAATCTTCTCATATTTTGT+AGG - chr3_2:73072368-73072387 Msa0423320:intron 20.0%
!! ATTAACAACTTCACAATTTA+TGG + chr3_2:73072642-73072661 None:intergenic 20.0%
!!! TCTTATTTTTGTGATCATTA+TGG + chr3_2:73072771-73072790 None:intergenic 20.0%
! GAAAGAAAGAAAGAAAACAA+GGG + chr3_2:73069413-73069432 None:intergenic 25.0%
! AGAAAGAAAGAAAGAAAACA+AGG + chr3_2:73069414-73069433 None:intergenic 25.0%
! TTCGTCAAACAATGAATATT+AGG - chr3_2:73069818-73069837 Msa0423320:CDS 25.0%
!! AATATTAGGATGAGTTTGTT+TGG - chr3_2:73069832-73069851 Msa0423320:CDS 25.0%
! AACATTCATTTCATAATGGT+GGG + chr3_2:73069931-73069950 None:intergenic 25.0%
! AAACATTCATTTCATAATGG+TGG + chr3_2:73069932-73069951 None:intergenic 25.0%
! ATGAATATATCAAAAGGTTC+CGG + chr3_2:73070104-73070123 None:intergenic 25.0%
!!! TTTGTAGGTCACTTTTAAAT+AGG + chr3_2:73070138-73070157 None:intergenic 25.0%
!! ATGTATGTACTTTGTTTATG+AGG - chr3_2:73070206-73070225 Msa0423320:intron 25.0%
!!! TTTTAGTCTTACTATTGGAA+AGG - chr3_2:73070255-73070274 Msa0423320:intron 25.0%
! ATACCTTGTAACTAAATTTG+TGG - chr3_2:73070371-73070390 Msa0423320:CDS 25.0%
! AAACCACAAATTTAGTTACA+AGG + chr3_2:73070377-73070396 None:intergenic 25.0%
! GAACAATTGCTACAATATTA+TGG - chr3_2:73070442-73070461 Msa0423320:CDS 25.0%
! ATTATAGAATTTATACTGGC+TGG - chr3_2:73070617-73070636 Msa0423320:intron 25.0%
!! AAAATTAGTTGGTCTAAGTA+TGG + chr3_2:73070725-73070744 None:intergenic 25.0%
!! AAATGATGCCATTCTAATTT+TGG + chr3_2:73070818-73070837 None:intergenic 25.0%
! GATAAACTTAACCAATAGTA+GGG + chr3_2:73071041-73071060 None:intergenic 25.0%
! TGATAAACTTAACCAATAGT+AGG + chr3_2:73071042-73071061 None:intergenic 25.0%
!! TACTATTGGTTAAGTTTATC+AGG - chr3_2:73071041-73071060 Msa0423320:intron 25.0%
!! TAACTAAGGAAACAGATTTT+AGG + chr3_2:73071088-73071107 None:intergenic 25.0%
! AGGAACATAAATGTTAACTA+AGG + chr3_2:73071102-73071121 None:intergenic 25.0%
!!! TGTCTTGTTTATTTCTTTCA+TGG - chr3_2:73071477-73071496 Msa0423320:intron 25.0%
! AAACTACACATTTGAAAAAC+AGG + chr3_2:73072272-73072291 None:intergenic 25.0%
! AATTAAATCTAGTATGCAGT+GGG - chr3_2:73072667-73072686 Msa0423320:intron 25.0%
!!! TGTTTTAAATTGCTTTGATC+AGG - chr3_2:73072819-73072838 Msa0423320:intron 25.0%
!!! GTTTTAAATTGCTTTGATCA+GGG - chr3_2:73072820-73072839 Msa0423320:intron 25.0%
! TAGATAATATTGAAGCCATT+TGG + chr3_2:73073138-73073157 None:intergenic 25.0%
!! ACTAGTAATATGATGTTTTC+TGG - chr3_2:73073219-73073238 Msa0423320:intron 25.0%
!! CTAGTAATATGATGTTTTCT+GGG - chr3_2:73073220-73073239 Msa0423320:intron 25.0%
! ATTATATTCATAACCCTTTC+AGG + chr3_2:73073325-73073344 None:intergenic 25.0%
! TCAAAAGAAAGATTGCATTT+CGG + chr3_2:73073401-73073420 None:intergenic 25.0%
!!! TTTTAGGTACTTGAATCTTT+TGG - chr3_2:73073844-73073863 Msa0423320:exon 25.0%
!!! TTTTGGACTAGTCTTTTTAT+CGG - chr3_2:73073861-73073880 Msa0423320:five_prime_UTR 25.0%
GTAAAATGCAGAAAATTGAG+AGG + chr3_2:73069363-73069382 None:intergenic 30.0%
AAAGAAAGAAAACAAGGGTT+TGG + chr3_2:73069408-73069427 None:intergenic 30.0%
ACAACAAATCAACCGAATAA+TGG - chr3_2:73069437-73069456 Msa0423320:three_prime_UTR 30.0%
CAAAAACTTAGATCTTTCTC+CGG + chr3_2:73069489-73069508 None:intergenic 30.0%
TAAACCACCAAATTCTTTGT+AGG - chr3_2:73069890-73069909 Msa0423320:CDS 30.0%
AAACCACCAAATTCTTTGTA+GGG - chr3_2:73069891-73069910 Msa0423320:CDS 30.0%
TTAACCACTTACCATCAATT+AGG + chr3_2:73070049-73070068 None:intergenic 30.0%
TAAAAGTGACCTACAAAATG+AGG - chr3_2:73070141-73070160 Msa0423320:intron 30.0%
AAAAGTGACCTACAAAATGA+GGG - chr3_2:73070142-73070161 Msa0423320:intron 30.0%
! ATATTAGTCCCTCATTTTGT+AGG + chr3_2:73070153-73070172 None:intergenic 30.0%
TACAAAATGAGGGACTAATA+TGG - chr3_2:73070152-73070171 Msa0423320:intron 30.0%
ACAAAATGAGGGACTAATAT+GGG - chr3_2:73070153-73070172 Msa0423320:intron 30.0%
!!! AAATTAGTTTTGCTACTCGT+TGG + chr3_2:73070237-73070256 None:intergenic 30.0%
GCATATTCAGAATATCTAGA+CGG - chr3_2:73070315-73070334 Msa0423320:intron 30.0%
!!! GTTTTTTCTTCTCATTCTAC+AGG - chr3_2:73070393-73070412 Msa0423320:CDS 30.0%
CACATGTTATTGATGTTACA+TGG - chr3_2:73070661-73070680 Msa0423320:intron 30.0%
TATTGATGTTACATGGATGA+AGG - chr3_2:73070668-73070687 Msa0423320:intron 30.0%
! AAGTTACTAATTTGGTGGAT+TGG + chr3_2:73070697-73070716 None:intergenic 30.0%
! TATCTGGGGTAAAAATTAGT+TGG + chr3_2:73070736-73070755 None:intergenic 30.0%
ATCATTTGCAAATTGTAGCT+AGG - chr3_2:73070831-73070850 Msa0423320:CDS 30.0%
CAGAATAATAAACAATGGCA+TGG + chr3_2:73070896-73070915 None:intergenic 30.0%
ACACATGTAGAATGAATAGT+GGG + chr3_2:73070972-73070991 None:intergenic 30.0%
AACACATGTAGAATGAATAG+TGG + chr3_2:73070973-73070992 None:intergenic 30.0%
AAATTCCCTTAGTAACAACT+TGG + chr3_2:73071014-73071033 None:intergenic 30.0%
TTCTACAAGGGAAACAAAAA+AGG + chr3_2:73071149-73071168 None:intergenic 30.0%
!! TTTTTGTTTCCCTTGTAGAA+TGG - chr3_2:73071149-73071168 Msa0423320:intron 30.0%
ATTCTATGCATTACTCTTGA+AGG + chr3_2:73071704-73071723 None:intergenic 30.0%
CAATGATCTACCAATTGAAA+TGG + chr3_2:73071863-73071882 None:intergenic 30.0%
CATTTCAATTGGTAGATCAT+TGG - chr3_2:73071861-73071880 Msa0423320:intron 30.0%
!! CTAAAAACAGTTTTGCTATC+GGG + chr3_2:73071921-73071940 None:intergenic 30.0%
!! GCTAAAAACAGTTTTGCTAT+CGG + chr3_2:73071922-73071941 None:intergenic 30.0%
TAGCTTATAGTTGAACTTGA+TGG - chr3_2:73071938-73071957 Msa0423320:intron 30.0%
! TATAGTTGAACTTGATGGTT+AGG - chr3_2:73071943-73071962 Msa0423320:intron 30.0%
TGAATGTGTTATGGAAACAA+AGG + chr3_2:73072164-73072183 None:intergenic 30.0%
CAAATAGTTCAAGAACTCAT+GGG + chr3_2:73072397-73072416 None:intergenic 30.0%
ACAAATAGTTCAAGAACTCA+TGG + chr3_2:73072398-73072417 None:intergenic 30.0%
!! AAATGAACTTGTTGACATTC+TGG - chr3_2:73072419-73072438 Msa0423320:intron 30.0%
CAATTAAATCTAGTATGCAG+TGG - chr3_2:73072666-73072685 Msa0423320:intron 30.0%
TGAAGTTGTTAATTGCTCAT+TGG - chr3_2:73072730-73072749 Msa0423320:intron 30.0%
CATTATGGAGTACAAGTAAT+AGG + chr3_2:73072756-73072775 None:intergenic 30.0%
AAAAAACATTTCATCCCTAG+CGG + chr3_2:73072890-73072909 None:intergenic 30.0%
! TATGATGTTTTCTGGGTATA+TGG - chr3_2:73073227-73073246 Msa0423320:intron 30.0%
TAGGTTAACAATCCATTGAT+TGG - chr3_2:73073280-73073299 Msa0423320:intron 30.0%
TGAGAAAAATTGCCAATCAA+TGG + chr3_2:73073295-73073314 None:intergenic 30.0%
! TTTCTCATTGATTACCTGAA+AGG - chr3_2:73073308-73073327 Msa0423320:intron 30.0%
! TTCTCATTGATTACCTGAAA+GGG - chr3_2:73073309-73073328 Msa0423320:intron 30.0%
!! TCTTAAGCGTTTTAAGTACA+TGG - chr3_2:73073487-73073506 Msa0423320:intron 30.0%
!!! AGTGGTTATGGTTTTTTACA+AGG + chr3_2:73073667-73073686 None:intergenic 30.0%
TTGTAAAAAACCATAACCAC+TGG - chr3_2:73073666-73073685 Msa0423320:intron 30.0%
TTCAACAATAATACAGACCA+TGG - chr3_2:73073764-73073783 Msa0423320:CDS 30.0%
CGTAAAACAAAATGTAACCA+TGG + chr3_2:73073784-73073803 None:intergenic 30.0%
TTGTGAAAATGTATACTAGG+TGG - chr3_2:73073964-73073983 Msa0423320:five_prime_UTR 30.0%
GATCTATGTTTCGAACATCA+AGG - chr3_2:73069241-73069260 Msa0423320:three_prime_UTR 35.0%
CGCGTATTTATAAGTGATTG+CGG + chr3_2:73069294-73069313 None:intergenic 35.0%
GCAGAAAATTGAGAGGTTTA+CGG + chr3_2:73069356-73069375 None:intergenic 35.0%
CAAAGTAATGTTCTCCTTCA+GGG + chr3_2:73069578-73069597 None:intergenic 35.0%
GTTTGTTTGGCATTAGCATT+TGG - chr3_2:73069845-73069864 Msa0423320:CDS 35.0%
GATCTTCTGATAGCATATGA+AGG - chr3_2:73069990-73070009 Msa0423320:intron 35.0%
AAAATACGGGACCTAATTGA+TGG - chr3_2:73070035-73070054 Msa0423320:intron 35.0%
CTTGACAGTTTAATAGAGTC+CGG - chr3_2:73070082-73070101 Msa0423320:intron 35.0%
CAAAATGAGGGACTAATATG+GGG - chr3_2:73070154-73070173 Msa0423320:intron 35.0%
! TGTACTTTGTTTATGAGGTC+AGG - chr3_2:73070211-73070230 Msa0423320:intron 35.0%
TGTAGCAATTGTTCTCGAAA+TGG + chr3_2:73070436-73070455 None:intergenic 35.0%
! CTTAGCTGAACTATTTTCAC+AGG - chr3_2:73070510-73070529 Msa0423320:CDS 35.0%
TTAGCCAATCAAATACGAAG+AGG + chr3_2:73070584-73070603 None:intergenic 35.0%
! CTAATTTTGGATGGTCACAA+AGG + chr3_2:73070805-73070824 None:intergenic 35.0%
GTGACCATCCAAAATTAGAA+TGG - chr3_2:73070807-73070826 Msa0423320:CDS 35.0%
! GATGCCATTCTAATTTTGGA+TGG + chr3_2:73070814-73070833 None:intergenic 35.0%
AATAAACAATGGCATGGAGA+TGG + chr3_2:73070890-73070909 None:intergenic 35.0%
! GCGTTTTACACTATCAATGT+GGG + chr3_2:73070928-73070947 None:intergenic 35.0%
AGTAACAACTTGGAGAGAAA+AGG + chr3_2:73071004-73071023 None:intergenic 35.0%
TTCTCTCCAAGTTGTTACTA+AGG - chr3_2:73071005-73071024 Msa0423320:intron 35.0%
TCTCTCCAAGTTGTTACTAA+GGG - chr3_2:73071006-73071025 Msa0423320:intron 35.0%
GGAATTTCATACCCTACTAT+TGG - chr3_2:73071027-73071046 Msa0423320:intron 35.0%
TAAGTTTATCAGGACATGAC+TGG - chr3_2:73071051-73071070 Msa0423320:intron 35.0%
! TTCTCCCTTTTTGTGCTTTT+CGG - chr3_2:73071313-73071332 Msa0423320:intron 35.0%
! TCAACCGAAAAGCACAAAAA+GGG + chr3_2:73071320-73071339 None:intergenic 35.0%
TCGGTTGAGGTATAAGAAAT+TGG - chr3_2:73071332-73071351 Msa0423320:intron 35.0%
GAGGTATAAGAAATTGGAAG+AGG - chr3_2:73071338-73071357 Msa0423320:intron 35.0%
!!! AAATTGGAAGAGGTGCTTTT+CGG - chr3_2:73071348-73071367 Msa0423320:intron 35.0%
TATAGATAAGTTCCCAGAAG+AGG - chr3_2:73071527-73071546 Msa0423320:intron 35.0%
AACCTCTGTACAAATCGTTT+GGG + chr3_2:73071571-73071590 None:intergenic 35.0%
TGTCAGTTTGAAAATGTACC+TGG + chr3_2:73071630-73071649 None:intergenic 35.0%
TTGTACATGTGTACAGTGTT+TGG - chr3_2:73071730-73071749 Msa0423320:intron 35.0%
CAAAGTTGCACCATTTCAAT+TGG - chr3_2:73071850-73071869 Msa0423320:intron 35.0%
TACAATGATATGAGTCGCTT+GGG + chr3_2:73071892-73071911 None:intergenic 35.0%
ATACAATGATATGAGTCGCT+TGG + chr3_2:73071893-73071912 None:intergenic 35.0%
TTTCCATAACACATTCAGTG+AGG - chr3_2:73072167-73072186 Msa0423320:intron 35.0%
CATTCAGTGAGGTTGAATAA+CGG - chr3_2:73072178-73072197 Msa0423320:intron 35.0%
AAAAAGAGCCTTTAGCTACT+TGG - chr3_2:73072538-73072557 Msa0423320:intron 35.0%
AAAAGAGCCTTTAGCTACTT+GGG - chr3_2:73072539-73072558 Msa0423320:intron 35.0%
GAATACTTACCAATGAGACA+AGG - chr3_2:73072842-73072861 Msa0423320:intron 35.0%
TGATGAGCATGAATCTTGAT+AGG - chr3_2:73073261-73073280 Msa0423320:intron 35.0%
!! TTTTAAGTACATGGAACAGC+TGG - chr3_2:73073496-73073515 Msa0423320:intron 35.0%
TTTAAGTACATGGAACAGCT+GGG - chr3_2:73073497-73073516 Msa0423320:intron 35.0%
CAAAACATAACCAGTGGTTA+TGG + chr3_2:73073679-73073698 None:intergenic 35.0%
CATTAACAGAAACTAGACAG+TGG - chr3_2:73073808-73073827 Msa0423320:CDS 35.0%
CGGTTGTGAAAATGTATACT+AGG - chr3_2:73073961-73073980 Msa0423320:five_prime_UTR 35.0%
GAAAATGTATACTAGGTGGT+TGG - chr3_2:73073968-73073987 Msa0423320:five_prime_UTR 35.0%
TAACACCATGAACACATTGT+CGG + chr3_2:73074100-73074119 None:intergenic 35.0%
AACATCAAGGCGATCTAGTA+GGG - chr3_2:73069254-73069273 Msa0423320:three_prime_UTR 40.0%
GCGATCTAGTAGGGAAATAA+CGG - chr3_2:73069263-73069282 Msa0423320:three_prime_UTR 40.0%
TGGAATCGCAGTCCATTATT+CGG + chr3_2:73069452-73069471 None:intergenic 40.0%
! TTCCATTCACTGAGTTGAAC+CGG - chr3_2:73069467-73069486 Msa0423320:three_prime_UTR 40.0%
TGATCAATTCAACGCGCTTA+TGG - chr3_2:73069509-73069528 Msa0423320:three_prime_UTR 40.0%
GATCAATTCAACGCGCTTAT+GGG - chr3_2:73069510-73069529 Msa0423320:three_prime_UTR 40.0%
!! TTCTGGTTCTAAACTCGAGA+AGG - chr3_2:73069536-73069555 Msa0423320:exon 40.0%
CCAAAGTAATGTTCTCCTTC+AGG + chr3_2:73069579-73069598 None:intergenic 40.0%
CCTGAAGGAGAACATTACTT+TGG - chr3_2:73069576-73069595 Msa0423320:CDS 40.0%
TACTTTGGCCTCGAGAATTT+CGG - chr3_2:73069591-73069610 Msa0423320:CDS 40.0%
! AAGTATTGCCGAAATTCTCG+AGG + chr3_2:73069602-73069621 None:intergenic 40.0%
! TTATTGCAACAGCGTTTTGC+AGG - chr3_2:73069623-73069642 Msa0423320:CDS 40.0%
GGCTACGTTGTTTGTGAATA+TGG - chr3_2:73070638-73070657 Msa0423320:intron 40.0%
GTCTAGAGAACTGGATCTAA+AGG + chr3_2:73070868-73070887 None:intergenic 40.0%
! GGCGTTTTACACTATCAATG+TGG + chr3_2:73070929-73070948 None:intergenic 40.0%
CCTGCAAATCCATTCTACAA+GGG + chr3_2:73071161-73071180 None:intergenic 40.0%
! TTGTAGAATGGATTTGCAGG+CGG - chr3_2:73071161-73071180 Msa0423320:intron 40.0%
! CTCAACCGAAAAGCACAAAA+AGG + chr3_2:73071321-73071340 None:intergenic 40.0%
! CTTTTTGTGCTTTTCGGTTG+AGG - chr3_2:73071319-73071338 Msa0423320:intron 40.0%
CAACCTCTGTACAAATCGTT+TGG + chr3_2:73071572-73071591 None:intergenic 40.0%
! GAACTTGATGGTTAGGATGA+TGG - chr3_2:73071950-73071969 Msa0423320:intron 40.0%
AAAGATCTCTCTACCTGAAC+TGG - chr3_2:73072039-73072058 Msa0423320:intron 40.0%
TTCTACACATGTTCCAGTTC+AGG + chr3_2:73072055-73072074 None:intergenic 40.0%
ACGTAGATTGCATTTCTGAC+AGG + chr3_2:73072102-73072121 None:intergenic 40.0%
CAACCTCACTGAATGTGTTA+TGG + chr3_2:73072173-73072192 None:intergenic 40.0%
!!! TTGATCGTCTTTTTCAGCAC+GGG + chr3_2:73072454-73072473 None:intergenic 40.0%
!!! CTTGATCGTCTTTTTCAGCA+CGG + chr3_2:73072455-73072474 None:intergenic 40.0%
CCATTAGCTAAACCACTCTT+TGG + chr3_2:73072513-73072532 None:intergenic 40.0%
CCAAAGAGTGGTTTAGCTAA+TGG - chr3_2:73072510-73072529 Msa0423320:intron 40.0%
TTGGGTGCACAAAAACTTTC+AGG - chr3_2:73072557-73072576 Msa0423320:intron 40.0%
ATCTTTCTTGCAGCAAAGCT+TGG - chr3_2:73072611-73072630 Msa0423320:intron 40.0%
AATGTGAAACTGTTACCGCT+AGG - chr3_2:73072872-73072891 Msa0423320:CDS 40.0%
ATGTGAAACTGTTACCGCTA+GGG - chr3_2:73072873-73072892 Msa0423320:CDS 40.0%
TGATGAGCAAAGATGCCAAA+TGG - chr3_2:73073120-73073139 Msa0423320:intron 40.0%
ATCACTCAACCTGAGTTCAA+GGG + chr3_2:73073558-73073577 None:intergenic 40.0%
TATCACTCAACCTGAGTTCA+AGG + chr3_2:73073559-73073578 None:intergenic 40.0%
TTTGCAGTAGTTGTCCATGT+TGG - chr3_2:73073611-73073630 Msa0423320:intron 40.0%
TTGCAGTAGTTGTCCATGTT+GGG - chr3_2:73073612-73073631 Msa0423320:intron 40.0%
CTTCAGTGCAGACATTCTTT+GGG - chr3_2:73073729-73073748 Msa0423320:intron 40.0%
AGCAGCTTGAATAGGGAAAA+TGG + chr3_2:73073913-73073932 None:intergenic 40.0%
TATACCTCCTGGAAAGGATA+CGG - chr3_2:73073941-73073960 Msa0423320:five_prime_UTR 40.0%
AGATACGACAGTATACATGC+TGG - chr3_2:73074064-73074083 Msa0423320:five_prime_UTR 40.0%
TTTCACCGACAATGTGTTCA+TGG - chr3_2:73074092-73074111 Msa0423320:five_prime_UTR 40.0%
GAACATCAAGGCGATCTAGT+AGG - chr3_2:73069253-73069272 Msa0423320:three_prime_UTR 45.0%
TAAATACGCGTACGTGTGTG+TGG - chr3_2:73069304-73069323 Msa0423320:three_prime_UTR 45.0%
AAATACGCGTACGTGTGTGT+GGG - chr3_2:73069305-73069324 Msa0423320:three_prime_UTR 45.0%
! GAAAACAAGGGTTTGGTTGC+AGG + chr3_2:73069401-73069420 None:intergenic 45.0%
TCTAAACTCGAGAAGGCTCT+CGG - chr3_2:73069543-73069562 Msa0423320:exon 45.0%
AGGCCCTACAAAGAATTTGG+TGG + chr3_2:73069897-73069916 None:intergenic 45.0%
GAGAGGCCCTACAAAGAATT+TGG + chr3_2:73069900-73069919 None:intergenic 45.0%
! GGGACCTAATTGATGGTAAG+TGG - chr3_2:73070042-73070061 Msa0423320:intron 45.0%
CCTCATATGCAAGCAATGTC+AGG + chr3_2:73070561-73070580 None:intergenic 45.0%
CCTGACATTGCTTGCATATG+AGG - chr3_2:73070558-73070577 Msa0423320:intron 45.0%
GAGGCCTCTTCGTATTTGAT+TGG - chr3_2:73070577-73070596 Msa0423320:intron 45.0%
ATGGAGATGGTCTAGAGAAC+TGG + chr3_2:73070877-73070896 None:intergenic 45.0%
GATAGTGTAAAACGCCACAC+TGG - chr3_2:73070933-73070952 Msa0423320:CDS 45.0%
TAAAACGCCACACTGGAACT+TGG - chr3_2:73070940-73070959 Msa0423320:CDS 45.0%
! GGACATGACTGGTTACTTGT+TGG - chr3_2:73071062-73071081 Msa0423320:intron 45.0%
! CCCTTGTAGAATGGATTTGC+AGG - chr3_2:73071158-73071177 Msa0423320:intron 45.0%
GCCTGCAAATCCATTCTACA+AGG + chr3_2:73071162-73071181 None:intergenic 45.0%
CTCCCAAACGATTTGTACAG+AGG - chr3_2:73071566-73071585 Msa0423320:intron 45.0%
GTACCTGGTGCATATAGCTA+CGG + chr3_2:73071615-73071634 None:intergenic 45.0%
AGCTGAGAAGCAACTAAGCA+GGG + chr3_2:73071791-73071810 None:intergenic 45.0%
! TAGGATGATGGTTCACTAGC+TGG - chr3_2:73071962-73071981 Msa0423320:intron 45.0%
! AGGATGATGGTTCACTAGCT+GGG - chr3_2:73071963-73071982 Msa0423320:intron 45.0%
TGAGTTACCTTCACAGGTGA+AGG - chr3_2:73072241-73072260 Msa0423320:intron 45.0%
CGTGCTGAAAAAGACGATCA+AGG - chr3_2:73072453-73072472 Msa0423320:intron 45.0%
CCATTCGCAATCTTCTCAGA+AGG + chr3_2:73072489-73072508 None:intergenic 45.0%
! CCTTCTGAGAAGATTGCGAA+TGG - chr3_2:73072486-73072505 Msa0423320:intron 45.0%
ATTGCGAATGGACCAAAGAG+TGG - chr3_2:73072498-73072517 Msa0423320:intron 45.0%
TTGTGCACCCAAGTAGCTAA+AGG + chr3_2:73072549-73072568 None:intergenic 45.0%
TTGCAAGCACCTTGTCTCAT+TGG + chr3_2:73072854-73072873 None:intergenic 45.0%
!! TTTTCTGTGACAAGTGCTGC+AGG - chr3_2:73073001-73073020 Msa0423320:intron 45.0%
CAAGATTCATGCTCATCACG+TGG + chr3_2:73073259-73073278 None:intergenic 45.0%
GTTTGCAAGAAGCTCAGAAG+AGG - chr3_2:73073426-73073445 Msa0423320:intron 45.0%
ATGAATGACCAAGACACGTG+GGG + chr3_2:73073468-73073487 None:intergenic 45.0%
GATGAATGACCAAGACACGT+GGG + chr3_2:73073469-73073488 None:intergenic 45.0%
AGATGAATGACCAAGACACG+TGG + chr3_2:73073470-73073489 None:intergenic 45.0%
GGTAAGACAGCTTCTTGTAG+CGG + chr3_2:73073523-73073542 None:intergenic 45.0%
GTTCAAGGGGAAAGACAACA+CGG + chr3_2:73073544-73073563 None:intergenic 45.0%
TTGTCTTTCCCCTTGAACTC+AGG - chr3_2:73073546-73073565 Msa0423320:intron 45.0%
TCACTCAACCTGAGTTCAAG+GGG + chr3_2:73073557-73073576 None:intergenic 45.0%
TAGTTGTCCATGTTGGGAGT+GGG - chr3_2:73073618-73073637 Msa0423320:intron 45.0%
CAGACATAATGTCCGTGGTT+GGG + chr3_2:73073644-73073663 None:intergenic 45.0%
CGTCGTCAAAACATAACCAG+TGG + chr3_2:73073685-73073704 None:intergenic 45.0%
! TTTTGACGACGAAACTGTCG+AGG - chr3_2:73073694-73073713 Msa0423320:intron 45.0%
GCTTCAGTGCAGACATTCTT+TGG - chr3_2:73073728-73073747 Msa0423320:intron 45.0%
ACAGAAACTAGACAGTGGAG+AGG - chr3_2:73073813-73073832 Msa0423320:CDS 45.0%
TTCCCTATTCAAGCTGCTTG+AGG - chr3_2:73073915-73073934 Msa0423320:five_prime_UTR 45.0%
CACCTCAAGCAGCTTGAATA+GGG + chr3_2:73073920-73073939 None:intergenic 45.0%
ACACCTCAAGCAGCTTGAAT+AGG + chr3_2:73073921-73073940 None:intergenic 45.0%
! AGGTGTTATACCTCCTGGAA+AGG - chr3_2:73073935-73073954 Msa0423320:five_prime_UTR 45.0%
TTCACAACCGTATCCTTTCC+AGG + chr3_2:73073951-73073970 None:intergenic 45.0%
! GGGTTTGGTTGCAGGAGAAA+TGG + chr3_2:73069393-73069412 None:intergenic 50.0%
CTCCGGTTCAACTCAGTGAA+TGG + chr3_2:73069472-73069491 None:intergenic 50.0%
CAATTCAACGCGCTTATGGG+TGG - chr3_2:73069513-73069532 Msa0423320:three_prime_UTR 50.0%
CTCGGCGATAATTTCCCTGA+AGG - chr3_2:73069561-73069580 Msa0423320:CDS 50.0%
CTTTGTAGGGCCTCTCAAAC+AGG - chr3_2:73069904-73069923 Msa0423320:CDS 50.0%
! AATGGTGGGACCTGTTTGAG+AGG + chr3_2:73069917-73069936 None:intergenic 50.0%
GTGTTTGCCAAGTTCCAGTG+TGG + chr3_2:73070950-73070969 None:intergenic 50.0%
! TAGAATGGATTTGCAGGCGG+TGG - chr3_2:73071164-73071183 Msa0423320:intron 50.0%
AGTTCCCAGAAGAGGAAGAC+AGG - chr3_2:73071535-73071554 Msa0423320:intron 50.0%
CACACCTGTCTTCCTCTTCT+GGG + chr3_2:73071542-73071561 None:intergenic 50.0%
TCACACCTGTCTTCCTCTTC+TGG + chr3_2:73071543-73071562 None:intergenic 50.0%
CTTCCGTAGCTATATGCACC+AGG - chr3_2:73071609-73071628 Msa0423320:intron 50.0%
CAGCTGAGAAGCAACTAAGC+AGG + chr3_2:73071792-73071811 None:intergenic 50.0%
ATGATGGTTCACTAGCTGGG+CGG - chr3_2:73071966-73071985 Msa0423320:intron 50.0%
GAAGGTAACTCAGACGAGGA+AGG + chr3_2:73072233-73072252 None:intergenic 50.0%
CTGTGAAGGTAACTCAGACG+AGG + chr3_2:73072237-73072256 None:intergenic 50.0%
CTCGTCTGAGTTACCTTCAC+AGG - chr3_2:73072235-73072254 Msa0423320:intron 50.0%
GGAATGACCTTCACCTGTGA+AGG + chr3_2:73072251-73072270 None:intergenic 50.0%
TGAATGACCAAGACACGTGG+GGG + chr3_2:73073467-73073486 None:intergenic 50.0%
GTAGTTGTCCATGTTGGGAG+TGG - chr3_2:73073617-73073636 Msa0423320:intron 50.0%
GCAGACATAATGTCCGTGGT+TGG + chr3_2:73073645-73073664 None:intergenic 50.0%
CAAGGCAGACATAATGTCCG+TGG + chr3_2:73073649-73073668 None:intergenic 50.0%
! TGGAGAGGCTGACGACTTTT+AGG - chr3_2:73073828-73073847 Msa0423320:CDS 50.0%
! GCTTGAGGTGTTATACCTCC+TGG - chr3_2:73073930-73073949 Msa0423320:five_prime_UTR 50.0%
ACAACCGTATCCTTTCCAGG+AGG + chr3_2:73073948-73073967 None:intergenic 50.0%
AACGCGCTTATGGGTGGTTC+TGG - chr3_2:73069519-73069538 Msa0423320:three_prime_UTR 55.0%
CTAGCTGGGCGGTCAATAGA+AGG - chr3_2:73071977-73071996 Msa0423320:intron 55.0%
AAAGAGACCCCCACGTGTCT+TGG - chr3_2:73073457-73073476 Msa0423320:intron 55.0%
TGACGACGAAACTGTCGAGG+TGG - chr3_2:73073697-73073716 Msa0423320:intron 55.0%
GGTTGGGCCCACTCCCAACA+TGG + chr3_2:73073628-73073647 None:intergenic 65.0%
GTTGGGAGTGGGCCCAACCA+CGG - chr3_2:73073629-73073648 Msa0423320:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 73069228 73074147 73069228 ID=Msa0423320;Name=Msa0423320
chr3_2 mRNA 73069228 73074147 73069228 ID=Msa0423320-mRNA-1;Parent=Msa0423320;Name=Msa0423320-mRNA-1;_AED=0.01;_eAED=0.01;_QI=300|1|1|1|1|1|6|324|366
chr3_2 exon 73069228 73069948 73069228 ID=Msa0423320-mRNA-1:exon:18149;Parent=Msa0423320-mRNA-1
chr3_2 exon 73070353 73070534 73070353 ID=Msa0423320-mRNA-1:exon:18148;Parent=Msa0423320-mRNA-1
chr3_2 exon 73070797 73070985 73070797 ID=Msa0423320-mRNA-1:exon:18147;Parent=Msa0423320-mRNA-1
chr3_2 exon 73071745 73071843 73071745 ID=Msa0423320-mRNA-1:exon:18146;Parent=Msa0423320-mRNA-1
chr3_2 exon 73072844 73072960 73072844 ID=Msa0423320-mRNA-1:exon:18145;Parent=Msa0423320-mRNA-1
chr3_2 exon 73073731 73074147 73073731 ID=Msa0423320-mRNA-1:exon:18144;Parent=Msa0423320-mRNA-1
chr3_2 five_prime_UTR 73073848 73074147 73073848 ID=Msa0423320-mRNA-1:five_prime_utr;Parent=Msa0423320-mRNA-1
chr3_2 CDS 73073731 73073847 73073731 ID=Msa0423320-mRNA-1:cds;Parent=Msa0423320-mRNA-1
chr3_2 CDS 73072844 73072960 73072844 ID=Msa0423320-mRNA-1:cds;Parent=Msa0423320-mRNA-1
chr3_2 CDS 73071745 73071843 73071745 ID=Msa0423320-mRNA-1:cds;Parent=Msa0423320-mRNA-1
chr3_2 CDS 73070797 73070985 73070797 ID=Msa0423320-mRNA-1:cds;Parent=Msa0423320-mRNA-1
chr3_2 CDS 73070353 73070534 73070353 ID=Msa0423320-mRNA-1:cds;Parent=Msa0423320-mRNA-1
chr3_2 CDS 73069552 73069948 73069552 ID=Msa0423320-mRNA-1:cds;Parent=Msa0423320-mRNA-1
chr3_2 three_prime_UTR 73069228 73069551 73069228 ID=Msa0423320-mRNA-1:three_prime_utr;Parent=Msa0423320-mRNA-1
Gene Sequence

>Msa0423320

ATGGGTGGTTCTGGTTCTAAACTCGAGAAGGCTCTCGGCGATAATTTCCCTGAAGGAGAACATTACTTTGGCCTCGAGAATTTCGGCAATACTTGTTATTGCAACAGCGTTTTGCAGGCTCTATACTTCTGTGTTCCATTTCGAGAACAATTGCTACAATATTATGGAAAAAACAAAAACATAGCAGATGCAGAAGAAAATCTTTTGACTTGCTTAGCTGAACTATTTTCACAGATAAGTTCCCAGAAGAGGAAGACAGGTGTGATTGCTCCCAAACGATTTGTACAGAGGTTGAAAAAACAGAATGAACTCTTCCGTAGCTATATGCACCAGGACGCCCATGAGTTCTTGAACTATTTGTTAAATGAACTTGTTGACATTCTGGAGAGAGATGCCCGTGCTGAAAAAGACGATCAAGGTACATTACTACCTTCTGAGAAGATTGCGAATGGACCAAAGAGTGGTTTAGCTAATGGTACTAAAAAAGAGCCTTTAGCTACTTGGGTGCACAAAAACTTTCAGGGAATACTTACCAATGAGACAAGGTGCTTGCAATGTGAAACTGTTACCGCTAGGGATGAAATGTTTTTTGACTTGAGTCTTGATATTGAACAAAATAGTTCAATTACAAGTTGTTTGAAAAATTTCAGTTCAACTGAGACATTGAATGCAGAAGACAAATTTTTCTGTGACAAGTGCTGCAGTTTGCAAGAAGCTCAGAAGAGGATGAAGATAAAGAGACCCCCACGTGTCTTGGTCATTCATCTTAAGCGTTTTAAGTACATGGAACAGCTGGGCCGCTACAAGAAGCTGTCTTACCGTGTTGTCTTTCCCCTTGAACTCAGGTTGAGTGATACAGATGAAGAAGCAGATATCGAGTATTCTCTATTTGCAGTAGTTGTCCATGTTGGGAGTGGGCCCAACCACGGACATTATGTCTGCCTTGTAAAAAACCATAACCACTGGTTATGTTTTGACGACGAAACTGTCGAGGTGGTTGATGAAGCTTCAGTGCAGACATTCTTTGGGTCGACACAAGACTTCAACAATAATACAGACCATGGTTACATTTTGTTTTACGAGAGCATTAACAGAAACTAG
Protein sequence

>Msa0423320

MGGSGSKLEKALGDNFPEGEHYFGLENFGNTCYCNSVLQALYFCVPFREQLLQYYGKNKNIADAEENLLTCLAELFSQISSQKRKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVDILERDARAEKDDQGTLLPSEKIANGPKSGLANGTKKEPLATWVHKNFQGILTNETRCLQCETVTARDEMFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKRPPRVLVIHLKRFKYMEQLGRYKKLSYRVVFPLELRLSDTDEEADIEYSLFAVVVHVGSGPNHGHYVCLVKNHNHWLCFDDETVEVVDEASVQTFFGSTQDFNNNTDHGYILFYESINRN*