AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0423270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0423270 MtrunA17_Chr3g0123951 98.361 366 6 0 1 366 1 366 0.0 752
Msa0423270 MtrunA17_Chr8g0382161 86.501 363 49 0 1 363 1 363 0.0 662
Msa0423270 MtrunA17_Chr3g0133061 30.347 346 190 10 23 360 584 886 2.75e-37 143
Msa0423270 MtrunA17_Chr6g0458421 28.531 354 192 9 17 360 23 325 2.45e-35 135
Msa0423270 MtrunA17_Chr4g0074041 30.205 341 194 10 24 360 93 393 5.17e-35 136
Msa0423270 MtrunA17_Chr6g0458441 28.933 356 188 10 17 360 121 423 5.57e-35 135
Msa0423270 MtrunA17_Chr5g0411271 29.855 345 182 10 24 360 155 447 7.38e-35 135
Msa0423270 MtrunA17_Chr5g0427301 31.481 324 186 10 23 340 542 835 1.09e-34 135
Msa0423270 MtrunA17_Chr6g0458431 27.954 347 189 9 24 360 95 390 1.72e-32 128
Msa0423270 MtrunA17_Chr1g0150541 29.781 319 186 8 24 334 182 470 2.24e-31 125
Msa0423270 MtrunA17_Chr1g0149991 29.539 369 186 14 16 340 176 514 7.37e-31 123
Msa0423270 MtrunA17_Chr5g0412381 29.102 323 190 8 23 338 424 714 2.85e-30 122
Msa0423270 MtrunA17_Chr2g0312901 27.746 346 211 8 23 365 22 331 3.72e-29 119
Msa0423270 MtrunA17_Chr2g0313171 30.172 348 187 12 24 360 465 767 1.78e-28 117
Msa0423270 MtrunA17_Chr1g0148321 30.696 316 169 9 24 330 108 382 3.02e-28 116
Msa0423270 MtrunA17_Chr3g0138791 30.794 315 170 11 24 330 108 382 2.07e-25 108
Msa0423270 MtrunA17_Chr8g0366721 26.744 344 185 10 24 360 213 496 1.11e-24 105
Msa0423270 MtrunA17_Chr4g0020741 27.100 369 221 13 24 363 183 532 6.50e-22 97.1
Msa0423270 MtrunA17_Chr5g0439971 27.187 320 181 9 22 330 203 481 1.06e-21 97.1
Msa0423270 MtrunA17_Chr1g0170261 26.415 318 182 8 24 330 202 478 3.07e-21 95.5
Msa0423270 MtrunA17_Chr4g0064671 27.459 244 112 5 169 360 13 243 5.14e-21 91.3
Msa0423270 MtrunA17_Chr8g0365831 24.928 349 199 13 24 360 165 462 2.51e-19 89.4
Msa0423270 MtrunA17_Chr7g0255591 33.129 163 87 5 208 363 754 901 2.52e-16 80.9
Msa0423270 MtrunA17_Chr4g0062491 25.000 312 167 11 64 360 32 291 6.04e-15 75.1
Msa0423270 MtrunA17_Chr2g0322211 27.234 235 141 8 137 364 652 863 1.01e-14 75.9
Msa0423270 MtrunA17_Chr4g0062561 24.138 348 190 12 24 360 254 538 2.85e-14 74.3
Msa0423270 MtrunA17_Chr7g0267641 29.778 225 127 10 153 363 730 937 2.92e-14 74.3
Msa0423270 MtrunA17_Chr1g0189101 29.091 165 96 5 208 366 765 914 3.43e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0423270 AT2G22310.1 82.418 364 61 2 1 363 1 362 0.0 629
Msa0423270 AT4G39910.1 81.471 367 64 3 1 363 1 367 0.0 624
Msa0423270 AT2G22310.3 81.763 329 57 2 36 363 4 330 0.0 561
Msa0423270 AT2G22310.2 81.846 325 56 2 40 363 3 325 0.0 555
Msa0423270 AT4G24560.1 28.280 343 199 10 24 360 543 844 4.27e-36 140
Msa0423270 AT5G57990.1 29.070 344 193 13 24 360 108 407 7.67e-34 133
Msa0423270 AT3G14400.1 28.530 347 211 7 23 365 24 337 2.48e-32 128
Msa0423270 AT5G65450.2 30.063 316 181 10 23 330 348 631 2.03e-31 125
Msa0423270 AT5G65450.1 29.747 316 182 9 23 330 329 612 2.55e-31 125
Msa0423270 AT4G31670.1 28.213 319 191 10 24 334 169 457 1.17e-30 123
Msa0423270 AT2G24640.2 27.900 319 192 9 24 334 5 293 3.05e-28 115
Msa0423270 AT2G24640.1 27.900 319 192 9 24 334 175 463 3.62e-28 116
Msa0423270 AT1G17110.3 28.161 348 194 12 24 360 439 741 7.03e-27 112
Msa0423270 AT1G17110.1 28.161 348 194 12 24 360 439 741 7.03e-27 112
Msa0423270 AT1G17110.2 28.161 348 194 12 24 360 443 745 7.45e-27 112
Msa0423270 AT4G17895.1 29.014 355 176 12 24 360 177 473 4.30e-25 107
Msa0423270 AT3G49600.2 28.707 317 173 10 24 330 107 380 3.16e-24 105
Msa0423270 AT3G49600.1 28.707 317 173 10 24 330 107 380 3.16e-24 105
Msa0423270 AT3G49600.3 28.707 317 173 10 24 330 107 380 4.14e-24 104
Msa0423270 AT5G46740.1 28.696 345 196 10 24 360 164 466 1.86e-22 99.4
Msa0423270 AT3G11910.3 26.822 343 197 10 22 351 197 498 1.23e-20 94.4
Msa0423270 AT3G11910.1 26.822 343 197 10 22 351 197 498 1.23e-20 94.4
Msa0423270 AT3G11910.4 26.822 343 197 10 22 351 196 497 1.28e-20 94.4
Msa0423270 AT3G11910.2 26.822 343 197 10 22 351 196 497 1.28e-20 94.4
Msa0423270 AT5G06600.1 26.027 365 203 12 22 360 198 521 1.64e-20 94.0
Msa0423270 AT5G06600.2 26.027 365 203 12 22 360 197 520 1.97e-20 93.6
Msa0423270 AT5G06600.3 26.027 365 203 12 22 360 198 521 2.15e-20 93.6
Msa0423270 AT5G10790.2 24.737 380 200 11 15 339 42 390 1.13e-18 87.4
Msa0423270 AT5G10790.1 24.474 380 201 11 15 339 171 519 2.93e-18 86.7
Msa0423270 AT5G46740.2 28.405 257 139 7 110 360 40 257 2.74e-16 80.5
Msa0423270 AT5G22030.2 30.723 166 94 6 204 363 761 911 9.71e-14 73.2
Msa0423270 AT5G22030.1 30.723 166 94 6 204 363 719 869 1.04e-13 73.2
Msa0423270 AT2G40930.1 31.250 160 88 6 208 360 769 913 1.22e-13 72.8
Msa0423270 AT2G40930.2 31.250 160 88 6 208 360 769 913 1.22e-13 72.8
Msa0423270 AT4G10590.4 31.325 166 93 6 204 363 744 894 8.06e-12 67.4
Msa0423270 AT4G10590.3 31.325 166 93 6 204 363 744 894 8.06e-12 67.4
Msa0423270 AT4G10590.1 31.325 166 93 6 204 363 744 894 8.06e-12 67.4
Msa0423270 AT4G10590.2 31.325 166 93 6 204 363 744 894 8.06e-12 67.4
Msa0423270 AT4G10570.1 31.325 166 93 6 204 363 745 895 1.08e-11 67.0
Msa0423270 AT1G32850.1 29.651 172 96 7 203 366 729 883 2.46e-11 65.9

Find 99 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCAGTGCAGACATTCTT+TGG 0.226632 3_2:+73026441 Msa0423270:CDS
TCACACCTGTCTTCCTCTTC+TGG 0.239068 3_2:-73024317 None:intergenic
TGATCAATTCAACGCGCTTA+TGG 0.265342 3_2:+73022294 Msa0423270:exon
GAACAATTGCTACAATATTA+TGG 0.282416 3_2:+73023217 Msa0423270:CDS
GAAAACAAGGGTTTGGTTGC+AGG 0.295988 3_2:-73022183 None:intergenic
AAATGAACTTGTTGACATTC+TGG 0.297380 3_2:+73025196 Msa0423270:CDS
CAACCTCTGTACAAATCGTT+TGG 0.322213 3_2:-73024346 None:intergenic
CCAAAGTAATGTTCTCCTTC+AGG 0.328815 3_2:-73022361 None:intergenic
TACTTTGGCCTCGAGAATTT+CGG 0.330275 3_2:+73022376 Msa0423270:CDS
TTTCACCGACAATGTGTTCA+TGG 0.344301 3_2:+73026805 Msa0423270:three_prime_UTR
TTCACAACCGTATCCTTTCC+AGG 0.348662 3_2:-73026661 None:intergenic
ACAACAAATCAACCGAATAA+TGG 0.350760 3_2:+73022222 Msa0423270:five_prime_UTR
GCAGAAAATTGAGAGGTTTA+CGG 0.360263 3_2:-73022138 None:intergenic
CAAAACATAACCAGTGGTTA+TGG 0.364423 3_2:-73026389 None:intergenic
CACCTCAAGCAGCTTGAATA+GGG 0.371228 3_2:-73026630 None:intergenic
ACACCTCAAGCAGCTTGAAT+AGG 0.376767 3_2:-73026631 None:intergenic
TTGCAAGCACCTTGTCTCAT+TGG 0.376816 3_2:-73025564 None:intergenic
TTGCAGTAGTTGTCCATGTT+GGG 0.380146 3_2:+73026325 Msa0423270:CDS
CCATTAGCTAAACCACTCTT+TGG 0.383199 3_2:-73025287 None:intergenic
AGCAGCTTGAATAGGGAAAA+TGG 0.388505 3_2:-73026623 None:intergenic
GATCAATTCAACGCGCTTAT+GGG 0.389504 3_2:+73022295 Msa0423270:exon
CTTCAGTGCAGACATTCTTT+GGG 0.391927 3_2:+73026442 Msa0423270:CDS
TGTAGCAATTGTTCTCGAAA+TGG 0.394146 3_2:-73023208 None:intergenic
AAAGAAAGAAAACAAGGGTT+TGG 0.396825 3_2:-73022190 None:intergenic
AACCTCTGTACAAATCGTTT+GGG 0.398526 3_2:-73024345 None:intergenic
AACGCGCTTATGGGTGGTTC+TGG 0.402741 3_2:+73022304 Msa0423270:exon
GGGTTTGGTTGCAGGAGAAA+TGG 0.406985 3_2:-73022175 None:intergenic
CTCCGGTTCAACTCAGTGAA+TGG 0.415224 3_2:-73022254 None:intergenic
TTCCATTCACTGAGTTGAAC+CGG 0.419523 3_2:+73022252 Msa0423270:five_prime_UTR
TGGAATCGCAGTCCATTATT+CGG 0.422546 3_2:-73022234 None:intergenic
TTGTCTTTCCCCTTGAACTC+AGG 0.435602 3_2:+73026259 Msa0423270:CDS
CACACCTGTCTTCCTCTTCT+GGG 0.437291 3_2:-73024316 None:intergenic
CGGTTGTGAAAATGTATACT+AGG 0.442107 3_2:+73026674 Msa0423270:three_prime_UTR
TATCACTCAACCTGAGTTCA+AGG 0.443968 3_2:-73026269 None:intergenic
CCTGAAGGAGAACATTACTT+TGG 0.451777 3_2:+73022361 Msa0423270:CDS
CCAAAGAGTGGTTTAGCTAA+TGG 0.456689 3_2:+73025287 Msa0423270:CDS
GAACATCAAGGCGATCTAGT+AGG 0.457073 3_2:+73022038 Msa0423270:five_prime_UTR
CAAAGTAATGTTCTCCTTCA+GGG 0.463000 3_2:-73022360 None:intergenic
AAAAGAGCCTTTAGCTACTT+GGG 0.466028 3_2:+73025316 Msa0423270:CDS
TTCCCTATTCAAGCTGCTTG+AGG 0.469530 3_2:+73026628 Msa0423270:three_prime_UTR
CATAGATCTTGTAAGTAAAA+CGG 0.469640 3_2:-73022011 None:intergenic
TTGTGCACCCAAGTAGCTAA+AGG 0.471803 3_2:-73025323 None:intergenic
TTTGCAGTAGTTGTCCATGT+TGG 0.472175 3_2:+73026324 Msa0423270:CDS
ACAAATAGTTCAAGAACTCA+TGG 0.473994 3_2:-73025172 None:intergenic
CAGACATAATGTCCGTGGTT+GGG 0.501159 3_2:-73026354 None:intergenic
GCTTGAGGTGTTATACCTCC+TGG 0.508191 3_2:+73026643 Msa0423270:three_prime_UTR
AAAGAGACCTCCACGTGTCT+TGG 0.509264 3_2:+73026170 Msa0423270:CDS
TAAATACGCGTACGTGTGTG+TGG 0.518147 3_2:+73022089 Msa0423270:five_prime_UTR
GCGATCTAGTAGGGAAATAA+CGG 0.521066 3_2:+73022048 Msa0423270:five_prime_UTR
TAGTTGTCCATGTTGGGAGT+GGG 0.524445 3_2:+73026331 Msa0423270:CDS
AACATCAAGGCGATCTAGTA+GGG 0.525605 3_2:+73022039 Msa0423270:five_prime_UTR
TCTAAACTCGAGAAGGCTCT+CGG 0.528934 3_2:+73022328 Msa0423270:CDS
AGTTCCCAGAAGAGGAAGAC+AGG 0.531654 3_2:+73024312 Msa0423270:CDS
GAAAATGTATACTAGGTTGT+TGG 0.537271 3_2:+73026681 Msa0423270:three_prime_UTR
AGAAAGAAAGAAAGAAAACA+AGG 0.537899 3_2:-73022196 None:intergenic
GTAGTTGTCCATGTTGGGAG+TGG 0.545060 3_2:+73026330 Msa0423270:CDS
GGTTGGGCCCACTCCCAACA+TGG 0.549398 3_2:-73026338 None:intergenic
TAACACCATGAACACATTGT+CGG 0.550479 3_2:-73026810 None:intergenic
GTTTGCAAGAAGCTCAGAAG+AGG 0.550711 3_2:+73026139 Msa0423270:intron
ATCACTCAACCTGAGTTCAA+GGG 0.571357 3_2:-73026268 None:intergenic
GCAGACATAATGTCCGTGGT+TGG 0.577071 3_2:-73026355 None:intergenic
CTCCCAAACGATTTGTACAG+AGG 0.577523 3_2:+73024343 Msa0423270:CDS
TATAGATAAGTTCCCAGAAG+AGG 0.577641 3_2:+73024304 Msa0423270:intron
CTTCCGTAGCTATATGCACC+AGG 0.590612 3_2:+73024386 Msa0423270:CDS
TTCTGGTTCTAAACTCGAGA+AGG 0.590698 3_2:+73022321 Msa0423270:CDS
GATCTATGTTTCGAACATCA+AGG 0.591486 3_2:+73022026 Msa0423270:five_prime_UTR
CAAATAGTTCAAGAACTCAT+GGG 0.594052 3_2:-73025171 None:intergenic
GTTGGGAGTGGGCCCAACCA+CGG 0.596385 3_2:+73026342 Msa0423270:CDS
AATGTGAAACTGTTACCGCT+AGG 0.596426 3_2:+73025585 Msa0423270:CDS
TATACCTCCTGGAAAGGATA+CGG 0.596449 3_2:+73026654 Msa0423270:three_prime_UTR
CCATTCGCAATCTTCTCAGA+AGG 0.599118 3_2:-73025263 None:intergenic
CAATTCAACGCGCTTATGGG+TGG 0.601033 3_2:+73022298 Msa0423270:exon
TTTAAGTACATGGAACAGCT+GGG 0.603531 3_2:+73026210 Msa0423270:CDS
GTACCTGGTGCATATAGCTA+CGG 0.605797 3_2:-73024389 None:intergenic
ATTGCGAATGGACCAAAGAG+TGG 0.607250 3_2:+73025275 Msa0423270:CDS
GAAAGAAAGAAAGAAAACAA+GGG 0.607288 3_2:-73022195 None:intergenic
AGGTGTTATACCTCCTGGAA+AGG 0.616671 3_2:+73026648 Msa0423270:three_prime_UTR
CGTAAAACAAAATGTAACCA+TGG 0.617281 3_2:-73026494 None:intergenic
AGATACGACAGTATACATGC+TGG 0.621357 3_2:+73026777 Msa0423270:three_prime_UTR
CTCGGCGATAATTTCCCTGA+AGG 0.623448 3_2:+73022346 Msa0423270:CDS
TCACTCAACCTGAGTTCAAG+GGG 0.625682 3_2:-73026267 None:intergenic
AAATACGCGTACGTGTGTGT+GGG 0.626278 3_2:+73022090 Msa0423270:five_prime_UTR
TTCAACAATAATACAGACCA+TGG 0.626392 3_2:+73026477 Msa0423270:CDS
CCTTCTGAGAAGATTGCGAA+TGG 0.627827 3_2:+73025263 Msa0423270:CDS
CGTCGTCAAAACATAACCAG+TGG 0.628688 3_2:-73026395 None:intergenic
ATGTGAAACTGTTACCGCTA+GGG 0.633533 3_2:+73025586 Msa0423270:CDS
CGCGTATTTATAAGTGATTG+CGG 0.634750 3_2:-73022076 None:intergenic
CAAGGCAGACATAATGTCCG+TGG 0.637860 3_2:-73026359 None:intergenic
GTAAAATGCAGAAAATTGAG+AGG 0.645211 3_2:-73022145 None:intergenic
TGACGACGAAACTGTCGAGG+TGG 0.668810 3_2:+73026410 Msa0423270:CDS
TGAATGACCAAGACACGTGG+AGG 0.677606 3_2:-73026177 None:intergenic
AAGTATTGCCGAAATTCTCG+AGG 0.684941 3_2:-73022384 None:intergenic
CATTAACAGAAACTAGACAG+TGG 0.687135 3_2:+73026521 Msa0423270:exon
GGTAAGACAGCTTCTTGTAG+CGG 0.692354 3_2:-73026233 None:intergenic
AGATGAATGACCAAGACACG+TGG 0.706612 3_2:-73026180 None:intergenic
GTTCAAGGGGAAAGACAACA+CGG 0.707575 3_2:-73026254 None:intergenic
ACAGAAACTAGACAGTGGAG+AGG 0.717214 3_2:+73026526 Msa0423270:exon
ACAACCGTATCCTTTCCAGG+AGG 0.737627 3_2:-73026658 None:intergenic
GAATACTTACCAATGAGACA+AGG 0.751910 3_2:+73025555 Msa0423270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTATTTATTATATGTATT+TGG + chr3_2:73022955-73022974 Msa0423270:intron 10.0%
!! ACTATTTATTATATGTATTT+GGG + chr3_2:73022956-73022975 Msa0423270:intron 10.0%
!!! AGATTTTTAAATTTTCATTT+CGG + chr3_2:73025501-73025520 Msa0423270:intron 10.0%
!! TTAAAAAAAAGTAGTAAAAT+AGG - chr3_2:73025773-73025792 None:intergenic 10.0%
!!! ATTTTACTACTTTTTTTTAA+AGG + chr3_2:73025773-73025792 Msa0423270:intron 10.0%
!!! TTTTACTACTTTTTTTTAAA+GGG + chr3_2:73025774-73025793 Msa0423270:intron 10.0%
!! ATTAAAAACGAAAATAAAAA+AGG - chr3_2:73026744-73026763 None:intergenic 10.0%
!!! TTTACTCTAAAATAAACTTA+AGG - chr3_2:73022649-73022668 None:intergenic 15.0%
!! TTATGATTATAGAATTTATC+TGG + chr3_2:73023387-73023406 Msa0423270:intron 15.0%
!!! TCTCTTTTTTAATAATATCT+GGG - chr3_2:73023525-73023544 None:intergenic 15.0%
!! AGATATTATTAAAAAAGAGA+CGG + chr3_2:73023525-73023544 Msa0423270:intron 15.0%
!! TAAATCAGAATAATAAACAA+TGG - chr3_2:73023675-73023694 None:intergenic 15.0%
!!! GTTATTTTATTTTTGTTAGA+AGG + chr3_2:73024897-73024916 Msa0423270:intron 15.0%
!!! TTTTTATTACTTTTAGTAAG+AGG + chr3_2:73025797-73025816 Msa0423270:intron 15.0%
!!! TATTTTCTAAATTCTGAATC+TGG - chr3_2:73022460-73022479 None:intergenic 20.0%
!!! ATTATTGTTTTGCTGAATTT+AGG + chr3_2:73022567-73022586 Msa0423270:intron 20.0%
!! TTGAAACATTCATTTCATAA+TGG - chr3_2:73022710-73022729 None:intergenic 20.0%
!! ATGAAATGAATGTTTCAAAA+AGG + chr3_2:73022712-73022731 Msa0423270:intron 20.0%
!! GATAGTAAGTTGTTAAAATA+CGG + chr3_2:73022796-73022815 Msa0423270:intron 20.0%
!! ATAGTAAGTTGTTAAAATAC+GGG + chr3_2:73022797-73022816 Msa0423270:intron 20.0%
!! GAGATTATGAATATATCAAA+AGG - chr3_2:73022885-73022904 None:intergenic 20.0%
!! TTGATATATTCATAATCTCA+AGG + chr3_2:73022886-73022905 Msa0423270:intron 20.0%
!!! CTAATTTTTAGTCTTACTAT+TGG + chr3_2:73023025-73023044 Msa0423270:intron 20.0%
!! TTAAAAAGTTACTAATTTGG+TGG - chr3_2:73023476-73023495 None:intergenic 20.0%
!! TGGTTAAAAAGTTACTAATT+TGG - chr3_2:73023479-73023498 None:intergenic 20.0%
!!! CTCTTTTTTAATAATATCTG+GGG - chr3_2:73023524-73023543 None:intergenic 20.0%
!!! GTCTCTTTTTTAATAATATC+TGG - chr3_2:73023526-73023545 None:intergenic 20.0%
!! AAATACAATAGCTAACAAAA+AGG - chr3_2:73023897-73023916 None:intergenic 20.0%
!!! TTTTTGTTAGCTATTGTATT+TGG + chr3_2:73023896-73023915 Msa0423270:intron 20.0%
!! ATCTATATCAAGAAATAACA+TGG - chr3_2:73024291-73024310 None:intergenic 20.0%
!!! TAAAAATATTTTCTGCTCAA+GGG - chr3_2:73024792-73024811 None:intergenic 20.0%
!!! TTAAAAATATTTTCTGCTCA+AGG - chr3_2:73024793-73024812 None:intergenic 20.0%
!!! TTAATCTTCTCATATTTTGT+AGG + chr3_2:73025145-73025164 Msa0423270:intron 20.0%
!! ATTAACAACTTCACAATTTA+TGG - chr3_2:73025419-73025438 None:intergenic 20.0%
!!! TCTTATTTTTGTGATCATTA+TGG - chr3_2:73025484-73025503 None:intergenic 20.0%
! GAAAGAAAGAAAGAAAACAA+GGG - chr3_2:73022198-73022217 None:intergenic 25.0%
! AGAAAGAAAGAAAGAAAACA+AGG - chr3_2:73022199-73022218 None:intergenic 25.0%
! TTCGTCAAACAATGAATATT+AGG + chr3_2:73022593-73022612 Msa0423270:intron 25.0%
! AACATTCATTTCATAATGGT+GGG - chr3_2:73022706-73022725 None:intergenic 25.0%
! AAACATTCATTTCATAATGG+TGG - chr3_2:73022707-73022726 None:intergenic 25.0%
! ATGAATATATCAAAAGGTTC+CGG - chr3_2:73022879-73022898 None:intergenic 25.0%
!!! TTTGTAGGTCACTTTTAAAT+AGG - chr3_2:73022913-73022932 None:intergenic 25.0%
!! ATGTATGTACTTTGTTTATG+AGG + chr3_2:73022981-73023000 Msa0423270:intron 25.0%
!!! TTTTAGTCTTACTATTGGAA+AGG + chr3_2:73023030-73023049 Msa0423270:intron 25.0%
! ATACCTTGTAACTAAATTTG+TGG + chr3_2:73023146-73023165 Msa0423270:intron 25.0%
! AAACCACAAATTTAGTTACA+AGG - chr3_2:73023152-73023171 None:intergenic 25.0%
! GAACAATTGCTACAATATTA+TGG + chr3_2:73023217-73023236 Msa0423270:CDS 25.0%
! TTAGTCAATCAAATACGAAA+AGG - chr3_2:73023359-73023378 None:intergenic 25.0%
!! AAAATTAGTTGGTCTAAGTA+TGG - chr3_2:73023499-73023518 None:intergenic 25.0%
!! AAATGATGCCATTCTAATTT+TGG - chr3_2:73023592-73023611 None:intergenic 25.0%
! GATAAACTTAACCAATAGTA+GGG - chr3_2:73023815-73023834 None:intergenic 25.0%
! TGATAAACTTAACCAATAGT+AGG - chr3_2:73023816-73023835 None:intergenic 25.0%
!! TACTATTGGTTAAGTTTATC+AGG + chr3_2:73023815-73023834 Msa0423270:intron 25.0%
!! TAACTAAGGAAACAGATTTT+AGG - chr3_2:73023863-73023882 None:intergenic 25.0%
! AGGAACATAAATGTTAACTA+AGG - chr3_2:73023877-73023896 None:intergenic 25.0%
!!! TGTCTTGTTTATTTCTTTCA+TGG + chr3_2:73024254-73024273 Msa0423270:intron 25.0%
! AAACTACACATTTGAAAAAC+AGG - chr3_2:73025049-73025068 None:intergenic 25.0%
! AATTAAATCTAGTATGCAGT+GGG + chr3_2:73025444-73025463 Msa0423270:intron 25.0%
!!! TGTTTTAAATTGCTTTGATC+AGG + chr3_2:73025532-73025551 Msa0423270:intron 25.0%
!!! GTTTTAAATTGCTTTGATCA+GGG + chr3_2:73025533-73025552 Msa0423270:intron 25.0%
! TAGATAATATTGAAGCCATT+TGG - chr3_2:73025851-73025870 None:intergenic 25.0%
!! ACTAGTAATATGATGTTTTC+TGG + chr3_2:73025932-73025951 Msa0423270:intron 25.0%
!! CTAGTAATATGATGTTTTCT+GGG + chr3_2:73025933-73025952 Msa0423270:intron 25.0%
! ATTATATTCATAACCCTTTC+AGG - chr3_2:73026038-73026057 None:intergenic 25.0%
! TCAAAAGAAAGATTGCATTT+CGG - chr3_2:73026114-73026133 None:intergenic 25.0%
!!! TTTTAGGTACTTGAATCTTT+TGG + chr3_2:73026557-73026576 Msa0423270:three_prime_UTR 25.0%
!!! TTTTGGACTAGTCTTTTTAT+CGG + chr3_2:73026574-73026593 Msa0423270:three_prime_UTR 25.0%
GTAAAATGCAGAAAATTGAG+AGG - chr3_2:73022148-73022167 None:intergenic 30.0%
AAAGAAAGAAAACAAGGGTT+TGG - chr3_2:73022193-73022212 None:intergenic 30.0%
ACAACAAATCAACCGAATAA+TGG + chr3_2:73022222-73022241 Msa0423270:five_prime_UTR 30.0%
CAAAAACTTAGATCTTTCTC+CGG - chr3_2:73022274-73022293 None:intergenic 30.0%
GTTTGTTTGACATTAGCATT+TGG + chr3_2:73022620-73022639 Msa0423270:intron 30.0%
TAAACCACTTACCATCAATT+AGG - chr3_2:73022824-73022843 None:intergenic 30.0%
TAAAAGTGACCTACAAAATG+AGG + chr3_2:73022916-73022935 Msa0423270:intron 30.0%
AAAAGTGACCTACAAAATGA+GGG + chr3_2:73022917-73022936 Msa0423270:intron 30.0%
! ATATTAGTCCCTCATTTTGT+AGG - chr3_2:73022928-73022947 None:intergenic 30.0%
TACAAAATGAGGGACTAATA+TGG + chr3_2:73022927-73022946 Msa0423270:intron 30.0%
ACAAAATGAGGGACTAATAT+GGG + chr3_2:73022928-73022947 Msa0423270:intron 30.0%
!!! AAATTAGTTTTGCTACTCGT+TGG - chr3_2:73023012-73023031 None:intergenic 30.0%
GCATATTCAGAATATCTAGA+CGG + chr3_2:73023090-73023109 Msa0423270:intron 30.0%
!!! GTTTTTTCTTCTCATTCTAC+AGG + chr3_2:73023168-73023187 Msa0423270:intron 30.0%
GATTATAGAATTTATCTGGC+TGG + chr3_2:73023391-73023410 Msa0423270:intron 30.0%
CACATGTTATTGATGTTACA+TGG + chr3_2:73023435-73023454 Msa0423270:intron 30.0%
TATTGATGTTACATGGATGA+AGG + chr3_2:73023442-73023461 Msa0423270:intron 30.0%
! AAGTTACTAATTTGGTGGAT+TGG - chr3_2:73023471-73023490 None:intergenic 30.0%
! TATCTGGGGTAAAAATTAGT+TGG - chr3_2:73023510-73023529 None:intergenic 30.0%
ATCATTTGCAAATTGTAGCT+AGG + chr3_2:73023605-73023624 Msa0423270:intron 30.0%
CAGAATAATAAACAATGGCA+TGG - chr3_2:73023670-73023689 None:intergenic 30.0%
! GTGTTTTACACTATCAATGT+GGG - chr3_2:73023702-73023721 None:intergenic 30.0%
ACACATGTAGAATGAATAGT+GGG - chr3_2:73023746-73023765 None:intergenic 30.0%
AACACATGTAGAATGAATAG+TGG - chr3_2:73023747-73023766 None:intergenic 30.0%
AAATTCCCTTAGTAACAACT+TGG - chr3_2:73023788-73023807 None:intergenic 30.0%
TTCTACAAGGGAAACAAAAA+AGG - chr3_2:73023924-73023943 None:intergenic 30.0%
!! TTTTTGTTTCCCTTGTAGAA+TGG + chr3_2:73023924-73023943 Msa0423270:intron 30.0%
ATTCTATGCATTACTCTTGA+AGG - chr3_2:73024481-73024500 None:intergenic 30.0%
CAATGATCTACCAATTGAAA+TGG - chr3_2:73024640-73024659 None:intergenic 30.0%
CATTTCAATTGGTAGATCAT+TGG + chr3_2:73024638-73024657 Msa0423270:intron 30.0%
!! CTAAAAACAGTTTTGCTATC+GGG - chr3_2:73024698-73024717 None:intergenic 30.0%
!! GCTAAAAACAGTTTTGCTAT+CGG - chr3_2:73024699-73024718 None:intergenic 30.0%
TAGCTTATAGTTGAACTTGA+TGG + chr3_2:73024715-73024734 Msa0423270:intron 30.0%
! TATAGTTGAACTTGATGGTT+AGG + chr3_2:73024720-73024739 Msa0423270:intron 30.0%
ATCACTTTCTACAAATGTTC+CGG - chr3_2:73024838-73024857 None:intergenic 30.0%
TGAATGTGTTATGGAAACAA+AGG - chr3_2:73024941-73024960 None:intergenic 30.0%
CAAATAGTTCAAGAACTCAT+GGG - chr3_2:73025174-73025193 None:intergenic 30.0%
ACAAATAGTTCAAGAACTCA+TGG - chr3_2:73025175-73025194 None:intergenic 30.0%
!! AAATGAACTTGTTGACATTC+TGG + chr3_2:73025196-73025215 Msa0423270:CDS 30.0%
CAATTAAATCTAGTATGCAG+TGG + chr3_2:73025443-73025462 Msa0423270:intron 30.0%
AAAAAACATTTCATCCCTAG+CGG - chr3_2:73025603-73025622 None:intergenic 30.0%
! TATGATGTTTTCTGGGTATA+TGG + chr3_2:73025940-73025959 Msa0423270:intron 30.0%
TAGGTTAACAATCCATTGAT+TGG + chr3_2:73025993-73026012 Msa0423270:intron 30.0%
TGAGAAAAATTGCCAATCAA+TGG - chr3_2:73026008-73026027 None:intergenic 30.0%
! TTTCTCATTGATTACCTGAA+AGG + chr3_2:73026021-73026040 Msa0423270:intron 30.0%
! TTCTCATTGATTACCTGAAA+GGG + chr3_2:73026022-73026041 Msa0423270:intron 30.0%
!! TCTTAAGCGTTTTAAGTACA+TGG + chr3_2:73026200-73026219 Msa0423270:CDS 30.0%
!!! AGTGGTTATGGTTTTTTACA+AGG - chr3_2:73026380-73026399 None:intergenic 30.0%
TTGTAAAAAACCATAACCAC+TGG + chr3_2:73026379-73026398 Msa0423270:CDS 30.0%
TTCAACAATAATACAGACCA+TGG + chr3_2:73026477-73026496 Msa0423270:CDS 30.0%
CGTAAAACAAAATGTAACCA+TGG - chr3_2:73026497-73026516 None:intergenic 30.0%
GAAAATGTATACTAGGTTGT+TGG + chr3_2:73026681-73026700 Msa0423270:three_prime_UTR 30.0%
GATCTATGTTTCGAACATCA+AGG + chr3_2:73022026-73022045 Msa0423270:five_prime_UTR 35.0%
CGCGTATTTATAAGTGATTG+CGG - chr3_2:73022079-73022098 None:intergenic 35.0%
GCAGAAAATTGAGAGGTTTA+CGG - chr3_2:73022141-73022160 None:intergenic 35.0%
CAAAGTAATGTTCTCCTTCA+GGG - chr3_2:73022363-73022382 None:intergenic 35.0%
TAAACCACCAAATTCTTTGC+AGG + chr3_2:73022665-73022684 Msa0423270:intron 35.0%
AAACCACCAAATTCTTTGCA+GGG + chr3_2:73022666-73022685 Msa0423270:intron 35.0%
GATCTTCTGATAGCATATGA+AGG + chr3_2:73022765-73022784 Msa0423270:intron 35.0%
AAAATACGGGACCTAATTGA+TGG + chr3_2:73022810-73022829 Msa0423270:intron 35.0%
CTTGACAGTTTAATAGAGTC+CGG + chr3_2:73022857-73022876 Msa0423270:intron 35.0%
CAAAATGAGGGACTAATATG+GGG + chr3_2:73022929-73022948 Msa0423270:intron 35.0%
! TGTACTTTGTTTATGAGGTC+AGG + chr3_2:73022986-73023005 Msa0423270:intron 35.0%
TGTAGCAATTGTTCTCGAAA+TGG - chr3_2:73023211-73023230 None:intergenic 35.0%
! CTTAGCTGAACTATTTTCAC+AGG + chr3_2:73023285-73023304 Msa0423270:CDS 35.0%
! CTAATTTTGGATGGTCACAA+AGG - chr3_2:73023579-73023598 None:intergenic 35.0%
GTGACCATCCAAAATTAGAA+TGG + chr3_2:73023581-73023600 Msa0423270:intron 35.0%
! GATGCCATTCTAATTTTGGA+TGG - chr3_2:73023588-73023607 None:intergenic 35.0%
AATAAACAATGGCATGGAGA+TGG - chr3_2:73023664-73023683 None:intergenic 35.0%
! GGTGTTTTACACTATCAATG+TGG - chr3_2:73023703-73023722 None:intergenic 35.0%
AGTAACAACTTGGAGAGAAA+AGG - chr3_2:73023778-73023797 None:intergenic 35.0%
TTCTCTCCAAGTTGTTACTA+AGG + chr3_2:73023779-73023798 Msa0423270:intron 35.0%
TCTCTCCAAGTTGTTACTAA+GGG + chr3_2:73023780-73023799 Msa0423270:intron 35.0%
GGAATTTCATACCCTACTAT+TGG + chr3_2:73023801-73023820 Msa0423270:intron 35.0%
! GACATGACTAGTTACTTGTA+GGG + chr3_2:73023837-73023856 Msa0423270:intron 35.0%
! TTCTCCCTTTTTGTGCTTTT+CGG + chr3_2:73024090-73024109 Msa0423270:intron 35.0%
! TCAACCGAAAAGCACAAAAA+GGG - chr3_2:73024097-73024116 None:intergenic 35.0%
TCGGTTGAGGTATAAGAAAT+TGG + chr3_2:73024109-73024128 Msa0423270:intron 35.0%
GAGGTATAAGAAATTGGAAG+AGG + chr3_2:73024115-73024134 Msa0423270:intron 35.0%
!!! AAATTGGAAGAGGTGCTTTT+CGG + chr3_2:73024125-73024144 Msa0423270:intron 35.0%
TATAGATAAGTTCCCAGAAG+AGG + chr3_2:73024304-73024323 Msa0423270:intron 35.0%
AACCTCTGTACAAATCGTTT+GGG - chr3_2:73024348-73024367 None:intergenic 35.0%
TGTCAGTTTGAAAATGTACC+TGG - chr3_2:73024407-73024426 None:intergenic 35.0%
TTGTACATGTGTACAGTGTT+TGG + chr3_2:73024507-73024526 Msa0423270:intron 35.0%
CAAAGTTGCACCATTTCAAT+TGG + chr3_2:73024627-73024646 Msa0423270:intron 35.0%
TACAATGATATGAGTCGCTT+GGG - chr3_2:73024669-73024688 None:intergenic 35.0%
ATACAATGATATGAGTCGCT+TGG - chr3_2:73024670-73024689 None:intergenic 35.0%
TTTCCATAACACATTCAGTG+AGG + chr3_2:73024944-73024963 Msa0423270:intron 35.0%
CATTCAGTGAGGTTGAATAA+CGG + chr3_2:73024955-73024974 Msa0423270:intron 35.0%
AAAAAGAGCCTTTAGCTACT+TGG + chr3_2:73025315-73025334 Msa0423270:CDS 35.0%
AAAAGAGCCTTTAGCTACTT+GGG + chr3_2:73025316-73025335 Msa0423270:CDS 35.0%
GAATACTTACCAATGAGACA+AGG + chr3_2:73025555-73025574 Msa0423270:CDS 35.0%
TGATGAGCATGAATCTTGAT+AGG + chr3_2:73025974-73025993 Msa0423270:intron 35.0%
!! TTTTAAGTACATGGAACAGC+TGG + chr3_2:73026209-73026228 Msa0423270:CDS 35.0%
TTTAAGTACATGGAACAGCT+GGG + chr3_2:73026210-73026229 Msa0423270:CDS 35.0%
CAAAACATAACCAGTGGTTA+TGG - chr3_2:73026392-73026411 None:intergenic 35.0%
CATTAACAGAAACTAGACAG+TGG + chr3_2:73026521-73026540 Msa0423270:exon 35.0%
CGGTTGTGAAAATGTATACT+AGG + chr3_2:73026674-73026693 Msa0423270:three_prime_UTR 35.0%
TAACACCATGAACACATTGT+CGG - chr3_2:73026813-73026832 None:intergenic 35.0%
AACATCAAGGCGATCTAGTA+GGG + chr3_2:73022039-73022058 Msa0423270:five_prime_UTR 40.0%
GCGATCTAGTAGGGAAATAA+CGG + chr3_2:73022048-73022067 Msa0423270:five_prime_UTR 40.0%
TGGAATCGCAGTCCATTATT+CGG - chr3_2:73022237-73022256 None:intergenic 40.0%
! TTCCATTCACTGAGTTGAAC+CGG + chr3_2:73022252-73022271 Msa0423270:five_prime_UTR 40.0%
TGATCAATTCAACGCGCTTA+TGG + chr3_2:73022294-73022313 Msa0423270:exon 40.0%
GATCAATTCAACGCGCTTAT+GGG + chr3_2:73022295-73022314 Msa0423270:exon 40.0%
!! TTCTGGTTCTAAACTCGAGA+AGG + chr3_2:73022321-73022340 Msa0423270:CDS 40.0%
CCAAAGTAATGTTCTCCTTC+AGG - chr3_2:73022364-73022383 None:intergenic 40.0%
CCTGAAGGAGAACATTACTT+TGG + chr3_2:73022361-73022380 Msa0423270:CDS 40.0%
TACTTTGGCCTCGAGAATTT+CGG + chr3_2:73022376-73022395 Msa0423270:CDS 40.0%
! AAGTATTGCCGAAATTCTCG+AGG - chr3_2:73022387-73022406 None:intergenic 40.0%
! TTATTGCAACAGCGTTTTGC+AGG + chr3_2:73022408-73022427 Msa0423270:CDS 40.0%
GGCTACGTTGTTTGTGAATA+TGG + chr3_2:73023412-73023431 Msa0423270:intron 40.0%
GTCTAGAGAACTGGATCTAA+AGG - chr3_2:73023642-73023661 None:intergenic 40.0%
GATAGTGTAAAACACCACAC+TGG + chr3_2:73023707-73023726 Msa0423270:intron 40.0%
TAAAACACCACACTGGAACT+TGG + chr3_2:73023714-73023733 Msa0423270:intron 40.0%
! GGACATGACTAGTTACTTGT+AGG + chr3_2:73023836-73023855 Msa0423270:intron 40.0%
CCTGCAAATCCATTCTACAA+GGG - chr3_2:73023936-73023955 None:intergenic 40.0%
! TTGTAGAATGGATTTGCAGG+CGG + chr3_2:73023936-73023955 Msa0423270:intron 40.0%
! CTCAACCGAAAAGCACAAAA+AGG - chr3_2:73024098-73024117 None:intergenic 40.0%
! CTTTTTGTGCTTTTCGGTTG+AGG + chr3_2:73024096-73024115 Msa0423270:intron 40.0%
CAACCTCTGTACAAATCGTT+TGG - chr3_2:73024349-73024368 None:intergenic 40.0%
! GAACTTGATGGTTAGGATGA+TGG + chr3_2:73024727-73024746 Msa0423270:intron 40.0%
AAAGATCTCTCTACCTGAAC+CGG + chr3_2:73024816-73024835 Msa0423270:intron 40.0%
TTCTACAAATGTTCCGGTTC+AGG - chr3_2:73024832-73024851 None:intergenic 40.0%
ACGTAGATTGCATTTCTGAC+AGG - chr3_2:73024879-73024898 None:intergenic 40.0%
CAACCTCACTGAATGTGTTA+TGG - chr3_2:73024950-73024969 None:intergenic 40.0%
!!! TTGATCGTCTTTTTCAGCAC+GGG - chr3_2:73025231-73025250 None:intergenic 40.0%
!!! CTTGATCGTCTTTTTCAGCA+CGG - chr3_2:73025232-73025251 None:intergenic 40.0%
CCATTAGCTAAACCACTCTT+TGG - chr3_2:73025290-73025309 None:intergenic 40.0%
CCAAAGAGTGGTTTAGCTAA+TGG + chr3_2:73025287-73025306 Msa0423270:CDS 40.0%
TTGGGTGCACAAAAACTTTC+AGG + chr3_2:73025334-73025353 Msa0423270:CDS 40.0%
ATCTTTCTTGCAGCAAAGCT+TGG + chr3_2:73025388-73025407 Msa0423270:intron 40.0%
AATGTGAAACTGTTACCGCT+AGG + chr3_2:73025585-73025604 Msa0423270:CDS 40.0%
ATGTGAAACTGTTACCGCTA+GGG + chr3_2:73025586-73025605 Msa0423270:CDS 40.0%
TGATGAGCAAAGATGCCAAA+TGG + chr3_2:73025833-73025852 Msa0423270:intron 40.0%
ATCACTCAACCTGAGTTCAA+GGG - chr3_2:73026271-73026290 None:intergenic 40.0%
TATCACTCAACCTGAGTTCA+AGG - chr3_2:73026272-73026291 None:intergenic 40.0%
TTTGCAGTAGTTGTCCATGT+TGG + chr3_2:73026324-73026343 Msa0423270:CDS 40.0%
TTGCAGTAGTTGTCCATGTT+GGG + chr3_2:73026325-73026344 Msa0423270:CDS 40.0%
CTTCAGTGCAGACATTCTTT+GGG + chr3_2:73026442-73026461 Msa0423270:CDS 40.0%
AGCAGCTTGAATAGGGAAAA+TGG - chr3_2:73026626-73026645 None:intergenic 40.0%
TATACCTCCTGGAAAGGATA+CGG + chr3_2:73026654-73026673 Msa0423270:three_prime_UTR 40.0%
AGATACGACAGTATACATGC+TGG + chr3_2:73026777-73026796 Msa0423270:three_prime_UTR 40.0%
TTTCACCGACAATGTGTTCA+TGG + chr3_2:73026805-73026824 Msa0423270:three_prime_UTR 40.0%
GAACATCAAGGCGATCTAGT+AGG + chr3_2:73022038-73022057 Msa0423270:five_prime_UTR 45.0%
TAAATACGCGTACGTGTGTG+TGG + chr3_2:73022089-73022108 Msa0423270:five_prime_UTR 45.0%
AAATACGCGTACGTGTGTGT+GGG + chr3_2:73022090-73022109 Msa0423270:five_prime_UTR 45.0%
! GAAAACAAGGGTTTGGTTGC+AGG - chr3_2:73022186-73022205 None:intergenic 45.0%
TCTAAACTCGAGAAGGCTCT+CGG + chr3_2:73022328-73022347 Msa0423270:CDS 45.0%
! GGGACCTAATTGATGGTAAG+TGG + chr3_2:73022817-73022836 Msa0423270:intron 45.0%
CCTCATATGCAAGCAATGTC+AGG - chr3_2:73023336-73023355 None:intergenic 45.0%
CCTGACATTGCTTGCATATG+AGG + chr3_2:73023333-73023352 Msa0423270:intron 45.0%
ATGGAGATGGTCTAGAGAAC+TGG - chr3_2:73023651-73023670 None:intergenic 45.0%
! CCCTTGTAGAATGGATTTGC+AGG + chr3_2:73023933-73023952 Msa0423270:intron 45.0%
GCCTGCAAATCCATTCTACA+AGG - chr3_2:73023937-73023956 None:intergenic 45.0%
CTCCCAAACGATTTGTACAG+AGG + chr3_2:73024343-73024362 Msa0423270:CDS 45.0%
GTACCTGGTGCATATAGCTA+CGG - chr3_2:73024392-73024411 None:intergenic 45.0%
AGCTGAGAAGCAACTAAGCA+GGG - chr3_2:73024568-73024587 None:intergenic 45.0%
! TAGGATGATGGTTCACTAGC+TGG + chr3_2:73024739-73024758 Msa0423270:intron 45.0%
! AGGATGATGGTTCACTAGCT+GGG + chr3_2:73024740-73024759 Msa0423270:intron 45.0%
TGAGTTACCTTCACAGGTGA+AGG + chr3_2:73025018-73025037 Msa0423270:intron 45.0%
CGTGCTGAAAAAGACGATCA+AGG + chr3_2:73025230-73025249 Msa0423270:CDS 45.0%
CCATTCGCAATCTTCTCAGA+AGG - chr3_2:73025266-73025285 None:intergenic 45.0%
! CCTTCTGAGAAGATTGCGAA+TGG + chr3_2:73025263-73025282 Msa0423270:CDS 45.0%
ATTGCGAATGGACCAAAGAG+TGG + chr3_2:73025275-73025294 Msa0423270:CDS 45.0%
TTGTGCACCCAAGTAGCTAA+AGG - chr3_2:73025326-73025345 None:intergenic 45.0%
TTGCAAGCACCTTGTCTCAT+TGG - chr3_2:73025567-73025586 None:intergenic 45.0%
!! TTTTCTGTGACAAGTGCTGC+AGG + chr3_2:73025714-73025733 Msa0423270:CDS 45.0%
CAAGATTCATGCTCATCACG+TGG - chr3_2:73025972-73025991 None:intergenic 45.0%
GTTTGCAAGAAGCTCAGAAG+AGG + chr3_2:73026139-73026158 Msa0423270:intron 45.0%
AGATGAATGACCAAGACACG+TGG - chr3_2:73026183-73026202 None:intergenic 45.0%
GGTAAGACAGCTTCTTGTAG+CGG - chr3_2:73026236-73026255 None:intergenic 45.0%
GTTCAAGGGGAAAGACAACA+CGG - chr3_2:73026257-73026276 None:intergenic 45.0%
TTGTCTTTCCCCTTGAACTC+AGG + chr3_2:73026259-73026278 Msa0423270:CDS 45.0%
TCACTCAACCTGAGTTCAAG+GGG - chr3_2:73026270-73026289 None:intergenic 45.0%
TAGTTGTCCATGTTGGGAGT+GGG + chr3_2:73026331-73026350 Msa0423270:CDS 45.0%
CAGACATAATGTCCGTGGTT+GGG - chr3_2:73026357-73026376 None:intergenic 45.0%
CGTCGTCAAAACATAACCAG+TGG - chr3_2:73026398-73026417 None:intergenic 45.0%
! TTTTGACGACGAAACTGTCG+AGG + chr3_2:73026407-73026426 Msa0423270:CDS 45.0%
GCTTCAGTGCAGACATTCTT+TGG + chr3_2:73026441-73026460 Msa0423270:CDS 45.0%
ACAGAAACTAGACAGTGGAG+AGG + chr3_2:73026526-73026545 Msa0423270:exon 45.0%
TTCCCTATTCAAGCTGCTTG+AGG + chr3_2:73026628-73026647 Msa0423270:three_prime_UTR 45.0%
CACCTCAAGCAGCTTGAATA+GGG - chr3_2:73026633-73026652 None:intergenic 45.0%
ACACCTCAAGCAGCTTGAAT+AGG - chr3_2:73026634-73026653 None:intergenic 45.0%
! AGGTGTTATACCTCCTGGAA+AGG + chr3_2:73026648-73026667 Msa0423270:three_prime_UTR 45.0%
TTCACAACCGTATCCTTTCC+AGG - chr3_2:73026664-73026683 None:intergenic 45.0%
! GGGTTTGGTTGCAGGAGAAA+TGG - chr3_2:73022178-73022197 None:intergenic 50.0%
CTCCGGTTCAACTCAGTGAA+TGG - chr3_2:73022257-73022276 None:intergenic 50.0%
CAATTCAACGCGCTTATGGG+TGG + chr3_2:73022298-73022317 Msa0423270:exon 50.0%
CTCGGCGATAATTTCCCTGA+AGG + chr3_2:73022346-73022365 Msa0423270:CDS 50.0%
AGGCCCTGCAAAGAATTTGG+TGG - chr3_2:73022672-73022691 None:intergenic 50.0%
GAGAGGCCCTGCAAAGAATT+TGG - chr3_2:73022675-73022694 None:intergenic 50.0%
! AATGGTGGGACCTGTTTGAG+AGG - chr3_2:73022692-73022711 None:intergenic 50.0%
GTGTTTGCCAAGTTCCAGTG+TGG - chr3_2:73023724-73023743 None:intergenic 50.0%
! TAGAATGGATTTGCAGGCGG+TGG + chr3_2:73023939-73023958 Msa0423270:intron 50.0%
AGTTCCCAGAAGAGGAAGAC+AGG + chr3_2:73024312-73024331 Msa0423270:CDS 50.0%
CACACCTGTCTTCCTCTTCT+GGG - chr3_2:73024319-73024338 None:intergenic 50.0%
TCACACCTGTCTTCCTCTTC+TGG - chr3_2:73024320-73024339 None:intergenic 50.0%
CTTCCGTAGCTATATGCACC+AGG + chr3_2:73024386-73024405 Msa0423270:CDS 50.0%
CAGCTGAGAAGCAACTAAGC+AGG - chr3_2:73024569-73024588 None:intergenic 50.0%
ATGATGGTTCACTAGCTGGG+CGG + chr3_2:73024743-73024762 Msa0423270:intron 50.0%
GAAGGTAACTCAGACGAGGA+AGG - chr3_2:73025010-73025029 None:intergenic 50.0%
CTGTGAAGGTAACTCAGACG+AGG - chr3_2:73025014-73025033 None:intergenic 50.0%
CTCGTCTGAGTTACCTTCAC+AGG + chr3_2:73025012-73025031 Msa0423270:intron 50.0%
GGAATGACCTTCACCTGTGA+AGG - chr3_2:73025028-73025047 None:intergenic 50.0%
AAAGAGACCTCCACGTGTCT+TGG + chr3_2:73026170-73026189 Msa0423270:CDS 50.0%
TGAATGACCAAGACACGTGG+AGG - chr3_2:73026180-73026199 None:intergenic 50.0%
GTAGTTGTCCATGTTGGGAG+TGG + chr3_2:73026330-73026349 Msa0423270:CDS 50.0%
GCAGACATAATGTCCGTGGT+TGG - chr3_2:73026358-73026377 None:intergenic 50.0%
CAAGGCAGACATAATGTCCG+TGG - chr3_2:73026362-73026381 None:intergenic 50.0%
! TGGAGAGGCTGACGACTTTT+AGG + chr3_2:73026541-73026560 Msa0423270:three_prime_UTR 50.0%
! GCTTGAGGTGTTATACCTCC+TGG + chr3_2:73026643-73026662 Msa0423270:three_prime_UTR 50.0%
ACAACCGTATCCTTTCCAGG+AGG - chr3_2:73026661-73026680 None:intergenic 50.0%
AACGCGCTTATGGGTGGTTC+TGG + chr3_2:73022304-73022323 Msa0423270:exon 55.0%
CTTTGCAGGGCCTCTCAAAC+AGG + chr3_2:73022679-73022698 Msa0423270:intron 55.0%
CTAGCTGGGCGGTCAATAGA+AGG + chr3_2:73024754-73024773 Msa0423270:intron 55.0%
TGACGACGAAACTGTCGAGG+TGG + chr3_2:73026410-73026429 Msa0423270:CDS 55.0%
GGTTGGGCCCACTCCCAACA+TGG - chr3_2:73026341-73026360 None:intergenic 65.0%
GTTGGGAGTGGGCCCAACCA+CGG + chr3_2:73026342-73026361 Msa0423270:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 73022013 73026860 73022013 ID=Msa0423270;Name=Msa0423270
chr3_2 mRNA 73022013 73026860 73022013 ID=Msa0423270-mRNA-1;Parent=Msa0423270;Name=Msa0423270-mRNA-1;_AED=0.01;_eAED=0.01;_QI=300|1|1|1|1|1|6|324|366
chr3_2 exon 73022013 73022429 73022013 ID=Msa0423270-mRNA-1:exon:18126;Parent=Msa0423270-mRNA-1
chr3_2 exon 73023190 73023306 73023190 ID=Msa0423270-mRNA-1:exon:18127;Parent=Msa0423270-mRNA-1
chr3_2 exon 73024309 73024407 73024309 ID=Msa0423270-mRNA-1:exon:18128;Parent=Msa0423270-mRNA-1
chr3_2 exon 73025167 73025355 73025167 ID=Msa0423270-mRNA-1:exon:18129;Parent=Msa0423270-mRNA-1
chr3_2 exon 73025554 73025735 73025554 ID=Msa0423270-mRNA-1:exon:18130;Parent=Msa0423270-mRNA-1
chr3_2 exon 73026140 73026860 73026140 ID=Msa0423270-mRNA-1:exon:18131;Parent=Msa0423270-mRNA-1
chr3_2 five_prime_UTR 73022013 73022312 73022013 ID=Msa0423270-mRNA-1:five_prime_utr;Parent=Msa0423270-mRNA-1
chr3_2 CDS 73022313 73022429 73022313 ID=Msa0423270-mRNA-1:cds;Parent=Msa0423270-mRNA-1
chr3_2 CDS 73023190 73023306 73023190 ID=Msa0423270-mRNA-1:cds;Parent=Msa0423270-mRNA-1
chr3_2 CDS 73024309 73024407 73024309 ID=Msa0423270-mRNA-1:cds;Parent=Msa0423270-mRNA-1
chr3_2 CDS 73025167 73025355 73025167 ID=Msa0423270-mRNA-1:cds;Parent=Msa0423270-mRNA-1
chr3_2 CDS 73025554 73025735 73025554 ID=Msa0423270-mRNA-1:cds;Parent=Msa0423270-mRNA-1
chr3_2 CDS 73026140 73026536 73026140 ID=Msa0423270-mRNA-1:cds;Parent=Msa0423270-mRNA-1
chr3_2 three_prime_UTR 73026537 73026860 73026537 ID=Msa0423270-mRNA-1:three_prime_utr;Parent=Msa0423270-mRNA-1
Gene Sequence

>Msa0423270

ATGGGTGGTTCTGGTTCTAAACTCGAGAAGGCTCTCGGCGATAATTTCCCTGAAGGAGAACATTACTTTGGCCTCGAGAATTTCGGCAATACTTGTTATTGCAACAGCGTTTTGCAGGCTCTATACTTCTGTGTTCCATTTCGAGAACAATTGCTACAATATTATGGAAAAAACAAAAACATAGCAGATGCAGAAGAAAATCTTTTGACTTGCTTAGCTGAACTATTTTCACAGATAAGTTCCCAGAAGAGGAAGACAGGTGTGATTGCTCCCAAACGATTTGTACAGAGGTTGAAAAAACAGAATGAACTCTTCCGTAGCTATATGCACCAGGACGCCCATGAGTTCTTGAACTATTTGTTAAATGAACTTGTTGACATTCTGGAGAGAGATGCCCGTGCTGAAAAAGACGATCAAGGTACATTACTACCTTCTGAGAAGATTGCGAATGGACCAAAGAGTGGTTTAGCTAATGGTACTAAAAAAGAGCCTTTAGCTACTTGGGTGCACAAAAACTTTCAGGGAATACTTACCAATGAGACAAGGTGCTTGCAATGTGAAACTGTTACCGCTAGGGATGAAATGTTTTTTGACTTGAGTCTTGATATTGAACAAAATAGTTCAATTACAAGTTGTTTGAAAAATTTCAGTTCAACTGAGACATTGAATGCAGAAGACAAATTTTTCTGTGACAAGTGCTGCAGTTTGCAAGAAGCTCAGAAGAGGATGAAGATAAAGAGACCTCCACGTGTCTTGGTCATTCATCTTAAGCGTTTTAAGTACATGGAACAGCTGGGCCGCTACAAGAAGCTGTCTTACCGTGTTGTCTTTCCCCTTGAACTCAGGTTGAGTGATACAGATGAAGAAGCAGATATCGAGTATTCTCTATTTGCAGTAGTTGTCCATGTTGGGAGTGGGCCCAACCACGGACATTATGTCTGCCTTGTAAAAAACCATAACCACTGGTTATGTTTTGACGACGAAACTGTCGAGGTGGTTGATGAAGCTTCAGTGCAGACATTCTTTGGGTCGACACAAGACTTCAACAATAATACAGACCATGGTTACATTTTGTTTTACGAGAGCATTAACAGAAACTAG
Protein sequence

>Msa0423270

MGGSGSKLEKALGDNFPEGEHYFGLENFGNTCYCNSVLQALYFCVPFREQLLQYYGKNKNIADAEENLLTCLAELFSQISSQKRKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVDILERDARAEKDDQGTLLPSEKIANGPKSGLANGTKKEPLATWVHKNFQGILTNETRCLQCETVTARDEMFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKRPPRVLVIHLKRFKYMEQLGRYKKLSYRVVFPLELRLSDTDEEADIEYSLFAVVVHVGSGPNHGHYVCLVKNHNHWLCFDDETVEVVDEASVQTFFGSTQDFNNNTDHGYILFYESINRN*