AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0426000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0426000 MtrunA17_Chr3g0128151 98.316 594 9 1 1 594 1 593 0.0 1222
Msa0426000 MtrunA17_Chr5g0428991 47.833 646 241 14 1 576 1 620 0.0 546
Msa0426000 MtrunA17_Chr3g0128111 84.615 208 25 1 25 232 45 245 7.70e-128 375
Msa0426000 MtrunA17_Chr6g0481091 48.636 220 106 3 17 232 1 217 6.48e-61 202
Msa0426000 MtrunA17_Chr3g0109821 62.092 153 57 1 21 172 5 157 8.68e-59 208
Msa0426000 MtrunA17_Chr2g0309891 49.029 206 78 4 21 220 5 189 1.41e-56 194
Msa0426000 MtrunA17_Chr5g0433781 60.526 152 60 0 21 172 5 156 2.12e-56 201
Msa0426000 MtrunA17_Chr5g0400461 55.828 163 62 3 21 176 5 164 1.75e-53 185
Msa0426000 MtrunA17_Chr1g0201021 52.601 173 79 2 1 173 1 170 2.55e-50 182
Msa0426000 MtrunA17_Chr4g0054791 54.268 164 70 3 21 180 5 167 2.73e-50 176
Msa0426000 MtrunA17_Chr8g0345691 54.487 156 62 4 18 170 8 157 3.59e-50 179
Msa0426000 MtrunA17_Chr8g0364791 50.641 156 77 0 17 172 1 156 1.49e-49 178
Msa0426000 MtrunA17_Chr8g0345671 56.954 151 56 5 22 169 11 155 3.59e-49 176
Msa0426000 MtrunA17_Chr3g0092671 53.797 158 70 3 17 173 1 156 6.40e-49 178
Msa0426000 MtrunA17_Chr5g0398971 50.000 156 75 3 19 172 4 158 7.83e-49 173
Msa0426000 MtrunA17_Chr3g0091921 43.721 215 99 4 22 221 16 223 8.05e-49 172
Msa0426000 MtrunA17_Chr4g0018391 51.282 156 73 3 18 172 3 156 9.57e-49 173
Msa0426000 MtrunA17_Chr1g0197361 54.667 150 66 2 25 173 11 159 1.14e-48 178
Msa0426000 MtrunA17_Chr4g0060931 54.902 153 65 2 22 172 17 167 1.28e-48 173
Msa0426000 MtrunA17_Chr1g0197351 54.375 160 67 1 21 174 41 200 2.37e-48 175
Msa0426000 MtrunA17_Chr3g0130101 42.654 211 97 3 25 220 10 211 3.06e-48 172
Msa0426000 MtrunA17_Chr4g0056541 46.061 165 86 2 18 181 3 165 1.05e-47 171
Msa0426000 MtrunA17_Chr8g0372121 49.673 153 74 2 22 173 6 156 1.31e-47 169
Msa0426000 MtrunA17_Chr6g0453451 52.727 165 67 3 22 184 20 175 1.92e-47 169
Msa0426000 MtrunA17_Chr7g0217721 42.795 229 96 7 25 232 22 236 8.59e-47 168
Msa0426000 MtrunA17_Chr6g0484441 52.318 151 68 2 22 172 5 151 1.29e-46 166
Msa0426000 MtrunA17_Chr4g0017921 50.641 156 71 3 21 174 7 158 2.19e-46 167
Msa0426000 MtrunA17_Chr5g0405211 50.658 152 72 2 22 172 8 157 3.43e-46 166
Msa0426000 MtrunA17_Chr8g0384201 47.436 156 82 0 17 172 1 156 3.45e-46 169
Msa0426000 MtrunA17_Chr7g0217711 58.871 124 49 1 25 148 22 143 8.58e-46 159
Msa0426000 MtrunA17_Chr2g0309331 49.359 156 75 3 21 174 9 162 2.03e-45 164
Msa0426000 MtrunA17_Chr8g0361731 47.273 165 74 4 25 178 17 179 2.84e-45 165
Msa0426000 MtrunA17_Chr2g0318081 48.750 160 80 1 17 176 11 168 4.89e-45 163
Msa0426000 MtrunA17_Chr4g0042561 50.955 157 67 3 22 172 9 161 5.59e-45 160
Msa0426000 MtrunA17_Chr3g0139331 54.545 154 64 3 21 172 10 159 5.82e-45 162
Msa0426000 MtrunA17_Chr1g0200561 50.658 152 72 2 22 172 19 168 6.83e-45 162
Msa0426000 MtrunA17_Chr6g0461661 47.977 173 76 4 22 190 18 180 8.20e-45 163
Msa0426000 MtrunA17_Chr8g0384721 37.410 278 134 10 22 265 7 278 3.64e-44 159
Msa0426000 MtrunA17_Chr3g0130731 45.902 183 78 6 22 197 7 175 5.10e-44 158
Msa0426000 MtrunA17_Chr5g0417001 45.732 164 77 4 25 178 17 178 5.82e-44 161
Msa0426000 MtrunA17_Chr2g0316971 50.617 162 64 4 22 174 23 177 6.58e-44 160
Msa0426000 MtrunA17_Chr5g0417791 50.000 162 65 3 22 174 3 157 9.67e-44 157
Msa0426000 MtrunA17_Chr1g0147421 52.903 155 66 4 21 172 26 176 1.05e-43 159
Msa0426000 MtrunA17_Chr3g0124761 50.641 156 67 4 22 172 7 157 1.59e-43 157
Msa0426000 MtrunA17_Chr8g0359921 50.920 163 74 3 17 176 9 168 1.76e-43 158
Msa0426000 MtrunA17_Chr7g0253011 50.920 163 62 4 22 173 17 172 2.99e-43 159
Msa0426000 MtrunA17_Chr7g0252971 47.283 184 77 5 22 187 8 189 4.47e-43 157
Msa0426000 MtrunA17_Chr4g0076731 49.664 149 70 3 25 172 57 201 8.20e-43 159
Msa0426000 MtrunA17_Chr2g0318101 45.181 166 76 3 22 174 15 178 1.73e-42 156
Msa0426000 MtrunA17_Chr2g0312321 48.750 160 67 4 22 175 11 161 2.23e-42 154
Msa0426000 MtrunA17_Chr6g0453131 35.496 262 142 7 14 264 7 252 2.44e-42 157
Msa0426000 MtrunA17_Chr8g0346001 43.787 169 85 2 14 172 7 175 1.42e-41 155
Msa0426000 MtrunA17_Chr7g0214071 50.000 154 66 4 22 172 15 160 4.30e-41 149
Msa0426000 MtrunA17_Chr2g0321741 50.000 144 59 3 43 181 13 148 3.25e-40 150
Msa0426000 MtrunA17_Chr4g0047841 44.444 180 73 4 22 176 15 192 4.26e-40 149
Msa0426000 MtrunA17_Chr7g0263931 43.229 192 97 5 22 203 11 200 6.65e-40 148
Msa0426000 MtrunA17_Chr8g0345731 53.030 132 55 4 22 147 24 154 1.71e-39 142
Msa0426000 MtrunA17_Chr2g0326361 45.251 179 85 6 21 192 13 185 3.89e-39 146
Msa0426000 MtrunA17_Chr3g0144271 55.385 130 53 3 22 148 23 150 4.25e-39 148
Msa0426000 MtrunA17_Chr1g0183741 47.403 154 73 3 21 172 9 156 5.05e-39 144
Msa0426000 MtrunA17_Chr8g0345711 50.355 141 66 3 20 157 10 149 6.27e-39 140
Msa0426000 MtrunA17_Chr3g0113001 38.739 222 121 6 77 286 18 236 5.13e-37 139
Msa0426000 MtrunA17_Chr7g0261411 46.711 152 73 3 21 170 9 154 5.35e-37 139
Msa0426000 MtrunA17_Chr8g0385991 43.195 169 81 4 19 178 11 173 1.39e-36 136
Msa0426000 MtrunA17_Chr4g0038751 45.806 155 73 4 21 172 15 161 1.92e-36 138
Msa0426000 MtrunA17_Chr5g0442771 46.626 163 72 6 22 172 19 178 3.44e-36 137
Msa0426000 MtrunA17_Chr2g0311651 40.984 183 87 6 9 173 8 187 5.56e-36 137
Msa0426000 MtrunA17_Chr2g0311661 40.556 180 86 6 12 173 10 186 2.12e-35 135
Msa0426000 MtrunA17_Chr3g0131911 42.353 170 84 3 19 178 11 176 1.09e-34 131
Msa0426000 MtrunA17_Chr8g0345741 46.099 141 67 4 33 170 2 136 2.23e-33 125
Msa0426000 MtrunA17_Chr8g0345701 50.000 144 52 6 21 147 6 146 1.12e-32 123
Msa0426000 MtrunA17_Chr8g0345721 41.026 156 59 4 24 147 37 191 7.47e-31 119
Msa0426000 MtrunA17_Chr4g0026141 40.764 157 84 5 22 170 5 160 4.98e-30 119
Msa0426000 MtrunA17_Chr2g0321631 40.385 156 85 5 23 170 5 160 1.47e-29 117
Msa0426000 MtrunA17_Chr7g0266701 37.349 166 92 6 19 173 1 165 6.76e-29 115
Msa0426000 MtrunA17_Chr3g0113031 37.559 213 117 7 87 286 3 212 6.78e-29 115
Msa0426000 MtrunA17_Chr7g0243371 51.351 74 34 1 77 148 17 90 2.31e-20 87.0
Msa0426000 MtrunA17_Chr4g0050701 35.659 129 71 3 22 148 11 129 9.88e-19 84.7
Msa0426000 MtrunA17_Chr7g0251651 34.058 138 81 4 11 147 13 141 9.43e-16 76.3
Msa0426000 MtrunA17_Chr3g0130321 33.333 165 84 7 22 171 7 160 7.17e-14 70.9
Msa0426000 MtrunA17_Chr7g0251661 32.283 127 82 3 22 147 10 133 2.73e-12 65.1
Msa0426000 MtrunA17_Chr2g0282871 29.814 161 92 6 10 153 41 197 2.15e-11 65.5
Msa0426000 MtrunA17_Chr4g0040541 28.395 162 88 6 7 147 33 187 3.31e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0426000 AT4G35580.1 39.417 515 242 16 14 524 1 449 1.81e-93 296
Msa0426000 AT4G35580.2 39.189 518 239 16 14 524 1 449 2.68e-93 297
Msa0426000 AT4G35580.3 39.189 518 239 16 14 524 1 449 3.06e-93 296
Msa0426000 AT1G33060.1 65.000 200 69 1 7 205 9 208 7.64e-89 288
Msa0426000 AT1G33060.2 65.000 200 69 1 7 205 9 208 7.80e-89 288
Msa0426000 AT3G49530.1 48.438 320 138 8 14 326 5 304 1.27e-85 275
Msa0426000 AT3G49530.2 48.438 320 138 8 14 326 5 304 1.51e-85 273
Msa0426000 AT5G24590.2 55.274 237 89 4 10 230 1 236 4.24e-84 270
Msa0426000 AT3G17730.1 60.131 153 61 0 21 173 5 157 7.22e-61 202
Msa0426000 AT1G65910.1 47.083 240 112 4 21 249 5 240 4.29e-59 208
Msa0426000 AT5G17260.1 61.438 153 58 1 21 172 5 157 7.51e-57 199
Msa0426000 AT3G03200.1 61.438 153 58 1 21 172 5 157 8.15e-56 196
Msa0426000 AT4G17980.1 42.169 249 118 6 20 244 4 250 1.04e-54 187
Msa0426000 AT4G17980.2 42.510 247 116 6 22 244 6 250 2.00e-54 187
Msa0426000 AT3G10490.1 56.774 155 66 1 21 174 26 180 2.14e-54 185
Msa0426000 AT3G10480.2 53.892 167 77 0 8 174 13 179 2.66e-54 191
Msa0426000 AT3G10480.1 54.706 170 72 2 8 174 13 180 3.74e-54 191
Msa0426000 AT3G10490.2 56.774 155 66 1 21 174 26 180 3.89e-53 188
Msa0426000 AT5G46590.1 56.688 157 62 3 22 174 6 160 1.21e-52 182
Msa0426000 AT3G10500.1 54.375 160 73 0 14 173 1 160 1.54e-52 189
Msa0426000 AT1G54330.1 57.516 153 62 1 21 173 5 154 1.49e-51 179
Msa0426000 AT5G04410.1 52.500 160 76 0 14 173 1 160 3.43e-51 185
Msa0426000 AT5G07680.2 47.525 202 87 5 22 211 3 197 1.77e-50 177
Msa0426000 AT5G07680.1 47.525 202 87 5 22 211 17 211 2.04e-50 177
Msa0426000 AT5G46590.2 61.719 128 48 1 22 148 6 133 5.36e-50 174
Msa0426000 AT5G61430.1 42.982 228 115 5 22 245 16 232 9.12e-50 176
Msa0426000 AT5G39610.1 54.375 160 69 2 22 179 20 177 2.11e-49 173
Msa0426000 AT1G12260.2 51.282 156 73 3 18 172 3 156 9.54e-49 173
Msa0426000 AT1G62700.1 51.282 156 73 3 18 172 3 156 9.94e-49 174
Msa0426000 AT1G62700.2 51.282 156 73 3 18 172 3 156 9.94e-49 174
Msa0426000 AT1G12260.1 51.282 156 73 3 18 172 3 156 1.99e-48 174
Msa0426000 AT5G62380.2 48.485 165 82 2 18 181 3 165 2.73e-48 172
Msa0426000 AT5G62380.1 48.485 165 82 2 18 181 3 165 2.73e-48 172
Msa0426000 AT4G10350.1 49.383 162 81 1 14 174 1 162 4.14e-48 171
Msa0426000 AT3G10480.3 45.813 203 72 3 8 174 13 213 7.07e-48 176
Msa0426000 AT2G27300.1 50.633 158 70 3 17 174 9 158 9.80e-48 170
Msa0426000 AT1G32510.1 50.303 165 74 2 22 178 6 170 3.04e-47 167
Msa0426000 AT2G18060.3 51.634 153 71 2 21 172 8 158 3.41e-47 169
Msa0426000 AT2G18060.1 51.634 153 71 2 21 172 8 158 3.41e-47 169
Msa0426000 AT3G18400.1 53.289 152 66 3 22 172 5 152 4.75e-47 168
Msa0426000 AT3G29035.1 56.291 151 62 3 22 170 24 172 5.11e-47 168
Msa0426000 AT1G33280.1 51.948 154 70 2 22 174 8 158 6.01e-47 167
Msa0426000 AT4G36160.1 42.857 196 105 3 21 215 9 198 6.67e-47 169
Msa0426000 AT4G36160.3 42.857 196 105 3 21 215 9 198 6.67e-47 169
Msa0426000 AT4G36160.2 42.857 196 105 3 21 215 13 202 6.96e-47 169
Msa0426000 AT3G04060.1 48.588 177 76 4 22 190 20 189 8.58e-47 168
Msa0426000 AT3G44290.2 52.318 151 63 3 25 175 17 158 1.34e-46 164
Msa0426000 AT2G24430.2 53.165 158 69 3 21 176 15 169 1.48e-46 166
Msa0426000 AT2G24430.1 53.165 158 69 3 21 176 15 169 1.48e-46 166
Msa0426000 AT5G22290.1 48.780 164 76 3 12 175 11 166 1.98e-46 167
Msa0426000 AT5G18270.2 52.795 161 71 3 19 176 18 176 6.50e-46 165
Msa0426000 AT3G44290.1 52.318 151 63 3 25 175 17 158 9.57e-46 165
Msa0426000 AT5G18270.1 52.795 161 71 3 19 176 18 176 9.96e-46 165
Msa0426000 AT4G27410.2 49.375 160 79 1 17 176 9 166 1.87e-45 163
Msa0426000 AT5G09330.5 40.081 247 135 6 25 267 9 246 2.01e-45 168
Msa0426000 AT5G09330.2 40.081 247 135 6 25 267 9 246 2.01e-45 168
Msa0426000 AT5G09330.4 40.081 247 135 6 25 267 9 246 2.01e-45 168
Msa0426000 AT5G09330.3 40.081 247 135 6 25 267 9 246 2.01e-45 168
Msa0426000 AT5G09330.1 40.081 247 135 6 25 267 9 246 2.01e-45 168
Msa0426000 AT1G69490.1 48.521 169 77 3 14 176 1 165 2.64e-45 161
Msa0426000 AT5G66300.1 49.351 154 76 2 21 173 11 163 3.63e-45 162
Msa0426000 AT5G64060.1 47.134 157 83 0 17 173 1 157 1.16e-44 162
Msa0426000 AT1G56010.2 46.032 189 84 6 22 199 19 200 3.20e-44 160
Msa0426000 AT3G12977.1 49.375 160 76 4 22 179 18 174 4.51e-44 159
Msa0426000 AT3G15170.1 50.932 161 63 4 22 173 20 173 4.86e-44 159
Msa0426000 AT1G71930.2 49.673 153 74 2 21 172 8 158 5.31e-44 160
Msa0426000 AT1G71930.1 49.673 153 74 2 21 172 8 158 5.31e-44 160
Msa0426000 AT5G08790.1 43.689 206 96 5 22 220 7 199 7.54e-44 158
Msa0426000 AT1G34190.1 53.020 149 70 0 25 173 19 167 9.20e-44 164
Msa0426000 AT1G76420.1 49.383 162 77 3 21 180 21 179 1.04e-43 159
Msa0426000 AT1G34180.3 51.678 149 72 0 25 173 19 167 1.84e-43 161
Msa0426000 AT2G02450.2 50.336 149 69 3 25 172 54 198 2.18e-43 160
Msa0426000 AT2G02450.1 50.336 149 69 3 25 172 54 198 2.22e-43 159
Msa0426000 AT2G33480.1 52.632 152 65 3 22 172 15 160 3.28e-43 156
Msa0426000 AT3G15500.1 49.359 156 77 1 17 172 9 162 4.37e-43 157
Msa0426000 AT3G04070.2 46.067 178 82 5 20 185 8 183 4.79e-43 157
Msa0426000 AT1G52890.1 49.359 156 77 1 17 172 9 162 5.68e-43 157
Msa0426000 AT1G34180.1 51.678 149 72 0 25 173 19 167 7.72e-43 162
Msa0426000 AT4G27410.3 45.143 175 81 1 17 176 9 183 1.06e-42 156
Msa0426000 AT1G26870.1 44.785 163 77 3 25 176 19 179 1.18e-42 159
Msa0426000 AT2G46770.1 40.394 203 98 4 14 193 8 210 1.60e-42 157
Msa0426000 AT1G01720.1 48.750 160 71 4 19 172 4 158 1.75e-42 154
Msa0426000 AT5G53950.1 50.932 161 63 4 22 173 17 170 2.89e-42 156
Msa0426000 AT5G13180.1 46.199 171 79 4 4 172 1 160 3.70e-42 152
Msa0426000 AT2G33480.2 50.993 151 67 2 22 172 15 158 6.23e-42 152
Msa0426000 AT1G32770.1 38.298 235 110 7 12 226 3 222 8.16e-42 155
Msa0426000 AT5G63790.1 50.314 159 67 5 21 172 49 202 1.00e-41 153
Msa0426000 AT5G63790.2 50.314 159 67 5 21 172 59 212 1.12e-41 153
Msa0426000 AT5G39820.1 43.931 173 72 5 25 174 23 193 1.74e-41 153
Msa0426000 AT1G77450.1 48.077 156 71 4 22 172 10 160 3.27e-41 150
Msa0426000 AT2G43000.1 47.097 155 78 3 20 172 15 167 5.58e-41 150
Msa0426000 AT1G61110.1 48.485 165 70 4 22 173 16 178 1.13e-40 150
Msa0426000 AT3G04070.1 42.487 193 81 5 21 185 9 199 1.58e-40 151
Msa0426000 AT1G34180.4 47.826 161 72 1 25 173 19 179 3.08e-40 153
Msa0426000 AT3G15510.1 44.379 169 79 3 26 181 21 187 3.27e-40 150
Msa0426000 AT1G79580.3 47.134 157 78 3 21 175 16 169 4.08e-40 150
Msa0426000 AT1G79580.5 47.134 157 78 3 21 175 16 169 4.08e-40 150
Msa0426000 AT1G79580.4 47.134 157 78 3 21 175 16 169 4.08e-40 150
Msa0426000 AT1G79580.2 47.134 157 78 3 21 175 16 169 4.08e-40 150
Msa0426000 AT1G79580.1 47.134 157 78 3 21 175 16 169 4.08e-40 150
Msa0426000 AT3G61910.1 42.135 178 83 3 14 174 3 177 4.82e-40 149
Msa0426000 AT1G34180.2 47.826 161 72 1 25 173 19 179 1.16e-39 153
Msa0426000 AT2G17040.1 46.358 151 71 3 25 172 9 152 6.90e-38 141
Msa0426000 AT4G28530.1 37.387 222 115 4 22 225 10 225 2.99e-37 142
Msa0426000 AT5G04395.1 47.183 142 61 2 20 147 26 167 1.06e-36 135
Msa0426000 AT1G32870.1 50.327 153 72 2 22 172 10 160 2.15e-36 143
Msa0426000 AT1G32870.2 50.327 153 72 2 22 172 10 160 2.24e-36 143
Msa0426000 AT1G32870.3 50.000 154 73 2 22 173 46 197 4.44e-36 142
Msa0426000 AT4G01550.1 44.654 159 73 4 24 175 6 156 5.87e-35 138
Msa0426000 AT5G61430.2 42.197 173 87 4 77 245 6 169 1.33e-34 132
Msa0426000 AT3G12910.1 41.237 194 79 8 25 190 24 210 4.80e-34 132
Msa0426000 AT1G52880.1 44.785 163 76 4 26 176 21 181 9.57e-34 131
Msa0426000 AT3G12977.2 51.376 109 52 1 72 179 13 121 3.13e-32 124
Msa0426000 AT1G02230.1 39.779 181 92 9 23 194 4 176 2.38e-31 125
Msa0426000 AT4G01520.1 39.759 166 83 6 23 180 5 161 8.41e-31 122
Msa0426000 AT4G10350.2 53.125 96 45 0 79 174 20 115 4.73e-30 120
Msa0426000 AT4G01540.4 38.788 165 84 6 24 180 6 161 2.87e-29 120
Msa0426000 AT4G01540.3 38.788 165 84 6 24 180 6 161 3.66e-29 120
Msa0426000 AT5G22380.1 39.241 158 89 5 20 170 3 160 4.09e-29 115
Msa0426000 AT4G01540.2 38.788 165 84 6 24 180 6 161 6.89e-29 119
Msa0426000 AT1G56010.1 48.062 129 60 4 70 193 1 127 7.25e-29 115
Msa0426000 AT4G01540.1 38.788 165 84 6 24 180 6 161 8.19e-29 120
Msa0426000 AT3G44350.2 38.750 160 93 4 22 176 5 164 1.91e-28 114
Msa0426000 AT3G04420.2 37.688 199 104 7 23 209 4 194 7.13e-28 114
Msa0426000 AT3G04420.1 37.688 199 104 7 23 209 4 194 1.08e-27 114
Msa0426000 AT1G02250.1 37.714 175 94 7 23 190 4 170 1.53e-27 114
Msa0426000 AT3G44350.1 41.985 131 72 3 22 148 5 135 3.20e-27 108
Msa0426000 AT2G33480.3 51.042 96 47 0 77 172 8 103 6.10e-27 108
Msa0426000 AT3G10490.4 65.000 80 27 1 96 174 1 80 1.03e-26 112
Msa0426000 AT3G10490.3 65.000 80 27 1 96 174 1 80 1.03e-26 112
Msa0426000 AT1G01010.1 36.810 163 86 4 24 176 5 160 1.30e-24 107
Msa0426000 AT1G02220.1 37.748 151 82 4 23 170 4 145 3.08e-22 99.8
Msa0426000 AT4G28530.2 45.872 109 41 2 22 114 10 116 8.37e-21 94.0
Msa0426000 AT2G18060.2 54.286 70 30 1 103 172 3 70 2.20e-19 89.0
Msa0426000 AT2G43000.2 44.318 88 48 1 86 172 2 89 8.13e-18 82.4
Msa0426000 AT5G22290.2 53.425 73 27 2 103 175 2 67 2.45e-17 82.4
Msa0426000 AT5G64530.2 34.109 129 69 4 21 147 2 116 2.56e-17 80.1
Msa0426000 AT5G64530.1 29.412 187 96 6 21 185 2 174 4.38e-17 80.1
Msa0426000 AT5G14000.2 31.429 140 90 2 10 147 3 138 3.71e-15 73.6
Msa0426000 AT5G14000.1 31.429 140 90 2 10 147 3 138 2.24e-14 72.8
Msa0426000 AT3G04430.1 35.294 136 74 5 28 151 6 139 2.81e-14 72.4
Msa0426000 AT3G56530.1 27.632 152 105 3 21 170 51 199 6.51e-14 73.6
Msa0426000 AT3G55210.1 28.221 163 97 5 22 170 11 167 3.63e-13 70.9
Msa0426000 AT5G50820.1 31.298 131 76 4 22 148 17 137 1.13e-12 67.4
Msa0426000 AT4G28500.1 31.579 152 80 7 15 147 52 198 1.31e-11 66.2
Msa0426000 AT1G25580.1 25.112 223 141 7 6 215 42 251 5.10e-11 65.5
Msa0426000 AT1G28470.1 30.667 150 83 7 15 147 70 215 7.22e-11 64.3

Find 190 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGCTCATAATTGTATTAT+AGG 0.165272 3_2:+76429690 None:intergenic
CTAAATTTCATACTGATAAA+AGG 0.165624 3_2:-76428866 Msa0426000:three_prime_UTR
GGAATAATTCAGAGGATTTA+AGG 0.202063 3_2:+76432576 None:intergenic
GAGAGATTGATGTCTGTAAA+TGG 0.244895 3_2:-76432300 Msa0426000:CDS
CCATCGGATGTTAATAATAC+TGG 0.246728 3_2:-76429754 Msa0426000:CDS
CCAAAGGGAAGAGGACTAAT+TGG 0.267361 3_2:-76431268 Msa0426000:CDS
TATTTCTTCTGGAGAGTAAT+TGG 0.285534 3_2:+76430980 None:intergenic
CTAACAATAGATCATCTTTC+GGG 0.285939 3_2:+76430344 None:intergenic
GGATCAGATTGTATTTCTTC+TGG 0.288766 3_2:+76430969 None:intergenic
CCAATTAGTCCTCTTCCCTT+TGG 0.296425 3_2:+76431268 None:intergenic
CAATTAGTCCTCTTCCCTTT+GGG 0.307407 3_2:+76431269 None:intergenic
ATGGAAATGGTGACGAGGTT+TGG 0.308267 3_2:-76432330 Msa0426000:CDS
AATGTTAAGGACAGTGGTTC+AGG 0.328510 3_2:-76430121 Msa0426000:CDS
CGAGGTTACAGCATTAGATA+TGG 0.348081 3_2:+76430866 None:intergenic
TGGAAATGGTGACGAGGTTT+GGG 0.354029 3_2:-76432329 Msa0426000:CDS
CTTCCCCATGTTAAATGTTA+AGG 0.357270 3_2:-76430134 Msa0426000:CDS
GCAAACTACTTCAGCTCCTT+TGG 0.357575 3_2:-76431006 Msa0426000:CDS
TCTAACAATAGATCATCTTT+CGG 0.362215 3_2:+76430343 None:intergenic
TAGCAGCCTTTACTAACATA+TGG 0.362315 3_2:-76429180 Msa0426000:CDS
CAGATTATTCTCCCCACCTT+TGG 0.375953 3_2:-76430317 Msa0426000:CDS
CATGGATACTGGAAGGCAAC+AGG 0.381571 3_2:-76431368 Msa0426000:CDS
GCAGTTACTTACAGTCATAT+TGG 0.382336 3_2:+76430075 None:intergenic
AAGGATCGTAAAATCAAATC+TGG 0.393585 3_2:-76431344 Msa0426000:CDS
CTGTTCAATCGATGTCCGTT+TGG 0.395786 3_2:+76431401 None:intergenic
AGTCTTACATACTAGCCAAC+TGG 0.398955 3_2:+76428966 None:intergenic
TTTCTTACCACAGCAATAAT+CGG 0.399051 3_2:+76429496 None:intergenic
ATGGTTTCCTCAGAGATATC+AGG 0.402055 3_2:+76430885 None:intergenic
GAGCAACAAATCATGGATAC+TGG 0.402836 3_2:-76431379 Msa0426000:CDS
AGAAAAGAATTTACCTGTCC+CGG 0.402976 3_2:+76431197 None:intergenic
AAATCTGGAACCATCTTGAT+TGG 0.406417 3_2:-76431329 Msa0426000:CDS
ATATTTCCTGCAGGAGGATC+AGG 0.408393 3_2:-76430392 Msa0426000:intron
CAGTTGAGGGGAGGCATGTA+GGG 0.410225 3_2:-76429085 Msa0426000:three_prime_UTR
TCTTTGAATTCGCTTCCGTT+AGG 0.413347 3_2:-76432412 Msa0426000:CDS
TAAATTTCATACTGATAAAA+GGG 0.413508 3_2:-76428865 Msa0426000:three_prime_UTR
ACATTTAACATGGGGAAGTT+CGG 0.413654 3_2:+76430139 None:intergenic
CTTTGAATTCGCTTCCGTTA+GGG 0.416452 3_2:-76432411 Msa0426000:CDS
TTGTTCGTCTCGTGCTGGCC+GGG 0.422165 3_2:+76429645 None:intergenic
TGTGATGTGGATACTGTAAT+AGG 0.423403 3_2:+76430942 None:intergenic
TGTAGTTTCTGCATCTGTGC+TGG 0.428757 3_2:-76429209 Msa0426000:CDS
GGTCGATGTGGGCTTCAGTA+TGG 0.428907 3_2:-76430247 Msa0426000:CDS
CCCACCCTCAAGGAGCTTGA+TGG 0.429254 3_2:-76431227 Msa0426000:CDS
ATTGTTCGTCTCGTGCTGGC+CGG 0.429734 3_2:+76429644 None:intergenic
AGCAGCCTTTACTAACATAT+GGG 0.436241 3_2:-76429179 Msa0426000:CDS
TTCTCTTGATTGTGTTCCAT+CGG 0.437033 3_2:-76432458 Msa0426000:CDS
AACGACGGTGTTGTCGCAAA+AGG 0.438910 3_2:+76429856 None:intergenic
AATAATCGACAGAGGACATA+TGG 0.439649 3_2:+76431077 None:intergenic
TGTCTCATGTGGGATGGTTA+AGG 0.445720 3_2:-76429560 Msa0426000:CDS
CGTTCGAAGATCAATGGAAA+TGG 0.451849 3_2:-76432343 Msa0426000:CDS
TACTTACGTTCGAAGATCAA+TGG 0.455738 3_2:-76432349 Msa0426000:CDS
ATAATTGTATTATAGGTCCT+TGG 0.455759 3_2:+76429697 None:intergenic
GTGGTTCTTCTTCTGTCCTC+AGG 0.458036 3_2:-76431435 Msa0426000:CDS
TTAAATTGTTCGTCTCGTGC+TGG 0.459827 3_2:+76429640 None:intergenic
GTACTGCTCAAAGGAGAATT+CGG 0.460146 3_2:-76429600 Msa0426000:CDS
TGTGTGTGCATATATATTGT+TGG 0.462536 3_2:-76429013 Msa0426000:three_prime_UTR
CATCCGATGGAAAAGCCGTC+TGG 0.463423 3_2:+76429767 None:intergenic
TTGAACAGAGCAACAAATCA+TGG 0.463690 3_2:-76431386 Msa0426000:CDS
CTTCTTCATTCCAATCAAGA+TGG 0.465917 3_2:+76431319 None:intergenic
ACAGTTGAGGGGAGGCATGT+AGG 0.474580 3_2:-76429086 Msa0426000:three_prime_UTR
GGTACCATCAAGCTCCTTGA+GGG 0.487153 3_2:+76431223 None:intergenic
GGAACACGAGTGCGCGATGA+AGG 0.488224 3_2:+76432666 None:intergenic
AGCTGCGGAAAATCATGCTT+CGG 0.489248 3_2:-76429392 Msa0426000:CDS
GTCAATTGCAAATGCAAGCA+AGG 0.491036 3_2:-76429314 Msa0426000:CDS
TGTGTTCCATCGGTCGATGA+TGG 0.492641 3_2:-76432448 Msa0426000:CDS
AGAGATTGATGTCTGTAAAT+GGG 0.493465 3_2:-76432299 Msa0426000:CDS
ACAATTATGAGCAGTGAAAG+TGG 0.495068 3_2:-76429682 Msa0426000:CDS
AGAATGAGTAAAGTAAAAGA+AGG 0.496185 3_2:+76432642 None:intergenic
AGAAGACCACAGAGCACAGT+TGG 0.499893 3_2:+76429237 None:intergenic
CAAAGGGAAGAGGACTAATT+GGG 0.501722 3_2:-76431267 Msa0426000:CDS
TGGTTGCTCATATCCATTGA+CGG 0.503137 3_2:+76429717 None:intergenic
TTCAGGAAGCAACTCGGATG+TGG 0.505403 3_2:-76430104 Msa0426000:CDS
CAGAGGATTTAAGGATGTGA+TGG 0.506276 3_2:+76432585 None:intergenic
GTGACTAACGGACACCTCAC+AGG 0.510714 3_2:+76430165 None:intergenic
AGAAGAAATACAATCTGATC+CGG 0.517670 3_2:-76430967 Msa0426000:CDS
GTGGAATTGTAAGGAGGGCC+CGG 0.518559 3_2:-76429663 Msa0426000:CDS
TGATGGTACCAACCCGGGAC+AGG 0.525518 3_2:-76431210 Msa0426000:intron
CTTTGAGCAGTACCTTGCAT+CGG 0.525564 3_2:+76429610 None:intergenic
TTAACATGGGGAAGTTCGGC+TGG 0.526190 3_2:+76430143 None:intergenic
CATATCTAATGCTGTAACCT+CGG 0.526983 3_2:-76430865 Msa0426000:CDS
GAAGTGTACAATGCCGTCAA+TGG 0.528860 3_2:-76429730 Msa0426000:CDS
TGGGAACCCTGGGACATGCC+TGG 0.531073 3_2:-76432280 Msa0426000:intron
GTGTTCCATCGGTCGATGAT+GGG 0.532265 3_2:-76432447 Msa0426000:CDS
CATACTAGCCAACTGGGTGG+TGG 0.532863 3_2:+76428973 None:intergenic
GAAAAGAATTTACCTGTCCC+GGG 0.534071 3_2:+76431198 None:intergenic
TACAGTGGTCGTGCACCCAA+AGG 0.535914 3_2:-76431284 Msa0426000:CDS
TTCAAAACCGATTATTGCTG+TGG 0.538149 3_2:-76429503 Msa0426000:intron
TCGATAAGTTCCTCGTCAGT+AGG 0.541389 3_2:+76432376 None:intergenic
ATGAGTAAAGTAAAAGAAGG+AGG 0.543309 3_2:+76432645 None:intergenic
TGGTACCATCAAGCTCCTTG+AGG 0.544119 3_2:+76431222 None:intergenic
CACGGAAGAGGATAAGCAGC+TGG 0.545379 3_2:-76430916 Msa0426000:CDS
ATATCCCCATATGTTAGTAA+AGG 0.553903 3_2:+76429174 None:intergenic
ACAGTGGTCGTGCACCCAAA+GGG 0.554173 3_2:-76431283 Msa0426000:CDS
CCAGTATTATTAACATCCGA+TGG 0.557242 3_2:+76429754 None:intergenic
AGACCACAGAGCACAGTTGG+AGG 0.558113 3_2:+76429240 None:intergenic
GTCGTGCACCCAAAGGGAAG+AGG 0.558317 3_2:-76431277 Msa0426000:CDS
TCATACTGATAAAAGGGATG+TGG 0.558693 3_2:-76428859 Msa0426000:three_prime_UTR
CACATCACAGGTCACGGAAG+AGG 0.559271 3_2:-76430928 Msa0426000:CDS
CTGTCCTTAACATTTAACAT+GGG 0.559386 3_2:+76430130 None:intergenic
GTGGATACTGTAATAGGAGC+CGG 0.562139 3_2:+76430948 None:intergenic
GCAGTGAAAGTGGAATTGTA+AGG 0.564087 3_2:-76429672 Msa0426000:CDS
CTCTTCCGTGACCTGTGATG+TGG 0.566229 3_2:+76430929 None:intergenic
AAGCATAAAATCAGAATCAA+CGG 0.567827 3_2:+76432555 None:intergenic
AGTGGTACGAAACAAGGATC+CGG 0.568363 3_2:-76431459 Msa0426000:CDS
ACCATCAAGCTCCTTGAGGG+TGG 0.568524 3_2:+76431226 None:intergenic
GTGGCATATGCACCAAAGGT+GGG 0.571599 3_2:+76430305 None:intergenic
TTTGTCAGTGGTACGAAACA+AGG 0.573682 3_2:-76431465 Msa0426000:CDS
ATACTAGCCAACTGGGTGGT+GGG 0.574310 3_2:+76428974 None:intergenic
CGATGCAAGGTACTGCTCAA+AGG 0.575026 3_2:-76429609 Msa0426000:CDS
AAGATTGAACATGTCTCATG+TGG 0.575379 3_2:-76429571 Msa0426000:CDS
TCAATTGCAAATGCAAGCAA+GGG 0.575808 3_2:-76429313 Msa0426000:CDS
ACTGTCCTTAACATTTAACA+TGG 0.576387 3_2:+76430129 None:intergenic
GCTTGATAGTGAAATTCTTG+TGG 0.577677 3_2:+76430286 None:intergenic
AATTGCAAAACTAGCTGCAG+AGG 0.578693 3_2:-76430796 Msa0426000:intron
CAAGCGAACAATGAATCAGA+TGG 0.579515 3_2:-76430268 Msa0426000:CDS
CAGGATCGCAAGTATCCAAA+CGG 0.580718 3_2:-76431416 Msa0426000:CDS
ATTTACAGACATCAATCTCT+CGG 0.583234 3_2:+76432302 None:intergenic
GAGCATCATATCCATCGCTA+TGG 0.583583 3_2:+76430835 None:intergenic
TCATGCATGTAAACAGAGGA+AGG 0.584990 3_2:-76429344 Msa0426000:CDS
TCCATCGGTCGATGATGGGA+TGG 0.586571 3_2:-76432443 Msa0426000:CDS
TGAGTATCGTCCCACCCTCA+AGG 0.587441 3_2:-76431237 Msa0426000:CDS
AGAATTTACCTGTCCCGGGT+TGG 0.588022 3_2:+76431202 None:intergenic
ATCATCACCACTGTAATCAA+AGG 0.589896 3_2:+76429825 None:intergenic
TGGTTTCCTCAGAGATATCA+GGG 0.590219 3_2:+76430886 None:intergenic
GTCTTACATACTAGCCAACT+GGG 0.591065 3_2:+76428967 None:intergenic
TAAGTTCCTCGTCAGTAGGT+CGG 0.593408 3_2:+76432380 None:intergenic
GAGCTTGATGGTACCAACCC+GGG 0.595115 3_2:-76431215 Msa0426000:CDS
AGTTTCAAACTGTGGTGAAG+TGG 0.597493 3_2:-76431030 Msa0426000:CDS
ATGTCTGTAAATGGGAACCC+TGG 0.597611 3_2:-76432291 Msa0426000:CDS
ATTACAAAACAATTTCCAGA+CGG 0.599672 3_2:-76429782 Msa0426000:CDS
GGAGAGTAATTGGCAGCCAA+AGG 0.600092 3_2:+76430990 None:intergenic
GAGGAAGTCTTTGATCTGAA+AGG 0.601808 3_2:+76429259 None:intergenic
TCGGTTGATTACCATAGCGA+TGG 0.603183 3_2:-76430846 Msa0426000:CDS
GAAGTTCGGCTGGTGACTAA+CGG 0.603490 3_2:+76430153 None:intergenic
TTTGGATACTTGCGATCCTG+AGG 0.603602 3_2:+76431419 None:intergenic
ATGTTAAATGTTAAGGACAG+TGG 0.603691 3_2:-76430127 Msa0426000:CDS
GGGATGTGGATAAAATTGCA+TGG 0.604279 3_2:-76428845 Msa0426000:three_prime_UTR
AATGAATCAGATGGTCGATG+TGG 0.606511 3_2:-76430259 Msa0426000:CDS
TATTACAGTATCCACATCAC+AGG 0.607630 3_2:-76430940 Msa0426000:CDS
ATGAATCAGATGGTCGATGT+GGG 0.608643 3_2:-76430258 Msa0426000:CDS
TGGAGACAAATAACAAACAA+AGG 0.609432 3_2:+76429122 None:intergenic
CCATCAAGCTCCTTGAGGGT+GGG 0.612423 3_2:+76431227 None:intergenic
TGTGGCATATGCACCAAAGG+TGG 0.615705 3_2:+76430304 None:intergenic
TTTAAATTATGATCTTAACT+GGG 0.616370 3_2:-76430197 Msa0426000:CDS
GGTCGGAATCGAAACCCTAA+CGG 0.616800 3_2:+76432397 None:intergenic
TGTATCACCCACCACCCAGT+TGG 0.616981 3_2:-76428981 Msa0426000:three_prime_UTR
AACAAATCATGGATACTGGA+AGG 0.619020 3_2:-76431375 Msa0426000:CDS
TGAAAGTGGAATTGTAAGGA+GGG 0.619029 3_2:-76429668 Msa0426000:CDS
TCTTGTGGCATATGCACCAA+AGG 0.619439 3_2:+76430301 None:intergenic
CAGTGGTTCAGGAAGCAACT+CGG 0.619958 3_2:-76430110 Msa0426000:CDS
ATCTTACGCGGTATATACGA+TGG 0.620363 3_2:-76432769 None:intergenic
TGTGCTGTGTGATGTTACGT+AGG 0.620369 3_2:+76432726 None:intergenic
CTTCCTCCAACTGTGCTCTG+TGG 0.620880 3_2:-76429243 Msa0426000:CDS
AGCCACACCTTTGATTACAG+TGG 0.625963 3_2:-76429832 Msa0426000:CDS
GCCATCCCATCATCGACCGA+TGG 0.629071 3_2:+76432442 None:intergenic
GCAGCCTTTACTAACATATG+GGG 0.629075 3_2:-76429178 Msa0426000:CDS
CACCACTGTAATCAAAGGTG+TGG 0.629668 3_2:+76429830 None:intergenic
GTGAAAGTGGAATTGTAAGG+AGG 0.630041 3_2:-76429669 Msa0426000:CDS
CTCACGAGGCAATTGACAGA+AGG 0.630848 3_2:-76429882 Msa0426000:CDS
TTTAAGACAAATCCGATGCA+AGG 0.634026 3_2:-76429622 Msa0426000:CDS
AAAATACCAGGCATGTCCCA+GGG 0.634126 3_2:+76432274 None:intergenic
GTTTGTTGTAGATTTGTCAG+TGG 0.637707 3_2:-76431477 Msa0426000:intron
ATGGATACTGGAAGGCAACA+GGG 0.638784 3_2:-76431367 Msa0426000:CDS
CTTCTGTCAATTGCCTCGTG+AGG 0.643214 3_2:+76429883 None:intergenic
GGAGCTTGATGGTACCAACC+CGG 0.644442 3_2:-76431216 Msa0426000:CDS
AGTATCCACATCACAGGTCA+CGG 0.646407 3_2:-76430934 Msa0426000:CDS
TGACTAACGGACACCTCACA+GGG 0.648297 3_2:+76430166 None:intergenic
TGTCCTTAACATTTAACATG+GGG 0.648596 3_2:+76430131 None:intergenic
TGTCTGTAAATGGGAACCCT+GGG 0.651893 3_2:-76432290 Msa0426000:CDS
GTGCTGTGTGATGTTACGTA+GGG 0.652855 3_2:+76432727 None:intergenic
ATACTGGAAGGCAACAGGGA+AGG 0.655689 3_2:-76431363 Msa0426000:CDS
GAATCAACGGAATAATTCAG+AGG 0.658682 3_2:+76432568 None:intergenic
TGGCATATGCACCAAAGGTG+GGG 0.660078 3_2:+76430306 None:intergenic
TTTGCAGGAGAAGAAAGCTG+CGG 0.665650 3_2:-76429407 Msa0426000:intron
CAATTGCAAATGCAAGCAAG+GGG 0.668319 3_2:-76429312 Msa0426000:CDS
TCAATGGATATGAGCAACCA+AGG 0.669058 3_2:-76429714 Msa0426000:CDS
ATCGGTCGATGATGGGATGG+CGG 0.670540 3_2:-76432440 Msa0426000:CDS
CTAATCATGCATGTAAACAG+AGG 0.675091 3_2:-76429348 Msa0426000:CDS
TGAACATGTCTCATGTGGGA+TGG 0.675641 3_2:-76429566 Msa0426000:CDS
GCAAGCTGCTTATCCTCACG+AGG 0.677048 3_2:-76429896 Msa0426000:CDS
AGCATTGAAGTTTCAAACTG+TGG 0.683843 3_2:-76431038 Msa0426000:CDS
TCAAAGGTGTGGCTAAACGA+CGG 0.685567 3_2:+76429841 None:intergenic
GGACAGAAGAAGAACCACTC+CGG 0.686334 3_2:+76431440 None:intergenic
CTGGGATCAAATTCCCTGTG+AGG 0.690111 3_2:-76430179 Msa0426000:CDS
TCGATTCCGACCTACTGACG+AGG 0.696170 3_2:-76432386 Msa0426000:CDS
TGTTATCCCTGATATCTCTG+AGG 0.698772 3_2:-76430892 Msa0426000:CDS
ATCGCTATGGTAATCAACCG+AGG 0.702461 3_2:+76430848 None:intergenic
AGATTGAACATGTCTCATGT+GGG 0.719131 3_2:-76429570 Msa0426000:CDS
GATCAATGGAAATGGTGACG+AGG 0.722632 3_2:-76432335 Msa0426000:CDS
TACGAAACAAGGATCCGGAG+TGG 0.730421 3_2:-76431454 Msa0426000:CDS
ATATACGATGGATTTAAACG+CGG 0.756724 3_2:-76432757 Msa0426000:five_prime_UTR
TTACATACTAGCCAACTGGG+TGG 0.784786 3_2:+76428970 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAAAAAAAAATCTGAA+TGG + chr3_2:76429085-76429104 None:intergenic 10.0%
!!! TAATTTTGATTTTTACGTTA+TGG - chr3_2:76429108-76429127 Msa0426000:three_prime_UTR 15.0%
!!! AATTTTGATTTTTACGTTAT+GGG - chr3_2:76429109-76429128 Msa0426000:three_prime_UTR 15.0%
!!! AGATTGTTTAAAAAAGTTTT+TGG - chr3_2:76429507-76429526 Msa0426000:CDS 15.0%
!!! TTTTAAATTATGATCTTAAC+TGG - chr3_2:76431392-76431411 Msa0426000:CDS 15.0%
!! TTTAAATTATGATCTTAACT+GGG - chr3_2:76431393-76431412 Msa0426000:CDS 15.0%
!!! TTAAGAAATTTTTTATTGCT+AGG - chr3_2:76432301-76432320 Msa0426000:CDS 15.0%
!! TAAATTTCATACTGATAAAA+GGG - chr3_2:76432725-76432744 Msa0426000:five_prime_UTR 15.0%
!! AAAAAGAAAAGAAAAATACC+AGG + chr3_2:76429331-76429350 None:intergenic 20.0%
!! TATATAAATAGCTTATACAC+AGG - chr3_2:76429668-76429687 Msa0426000:CDS 20.0%
!!! TGATGTTTTGAGTAATAAAT+AGG - chr3_2:76430046-76430065 Msa0426000:intron 20.0%
!!! CTATAATTACTAGTTTTTAG+AGG - chr3_2:76430838-76430857 Msa0426000:CDS 20.0%
!!! CATTCAGATATATTTCTTTT+AGG - chr3_2:76430917-76430936 Msa0426000:CDS 20.0%
!!! TACATATTTTAAATTCAGTG+TGG - chr3_2:76430949-76430968 Msa0426000:CDS 20.0%
!!! GGTTTTTTATGCTAATAAAA+TGG + chr3_2:76430995-76431014 None:intergenic 20.0%
!!! CTTTTTTAGCTAATAAAACT+AGG + chr3_2:76431016-76431035 None:intergenic 20.0%
!!! TGATTTGATTTTAATTGCAT+TGG - chr3_2:76431149-76431168 Msa0426000:intron 20.0%
!!! ATATTCTCATTTTATGATGT+AGG - chr3_2:76431667-76431686 Msa0426000:intron 20.0%
!!! TATTCTCATTTTATGATGTA+GGG - chr3_2:76431668-76431687 Msa0426000:intron 20.0%
!!! TTAAATTTTGAAATGCTAGT+AGG - chr3_2:76432440-76432459 Msa0426000:CDS 20.0%
!! CTAAATTTCATACTGATAAA+AGG - chr3_2:76432724-76432743 Msa0426000:five_prime_UTR 20.0%
! AGAATGAGTAAAGTAAAAGA+AGG + chr3_2:76428951-76428970 None:intergenic 25.0%
! AAGCATAAAATCAGAATCAA+CGG + chr3_2:76429038-76429057 None:intergenic 25.0%
! CTCATAATTTCATCTTGATT+TGG - chr3_2:76429366-76429385 Msa0426000:CDS 25.0%
! AATTAAACTGTCTTCGTATA+TGG - chr3_2:76429775-76429794 Msa0426000:CDS 25.0%
!!! TAATTTTCACAAGCTTTTTC+CGG + chr3_2:76429844-76429863 None:intergenic 25.0%
! CTTATCATATAAGTGGTTAT+AGG + chr3_2:76429947-76429966 None:intergenic 25.0%
! TTAAGCTATTTATCCAAACA+AGG - chr3_2:76429987-76430006 Msa0426000:intron 25.0%
! AAAACAGAAAAAACAGATCA+AGG + chr3_2:76430013-76430032 None:intergenic 25.0%
!!! GATCTGTTTTTTCTGTTTTA+AGG - chr3_2:76430014-76430033 Msa0426000:intron 25.0%
! TCTTAGCTAGATGTAAAAAT+AGG + chr3_2:76430424-76430443 None:intergenic 25.0%
! TCTAGCTAAGAAATTACTAT+AGG - chr3_2:76430433-76430452 Msa0426000:intron 25.0%
!! TTTTCTTAAATAATCGACAG+AGG + chr3_2:76430524-76430543 None:intergenic 25.0%
!!! CTAGTTTTGCAATTTGATTT+TGG + chr3_2:76430788-76430807 None:intergenic 25.0%
!!! AATTACTAGTTTTTAGAGGT+TGG - chr3_2:76430842-76430861 Msa0426000:CDS 25.0%
! AGAGAAACTAATTATGAGAA+TGG - chr3_2:76431034-76431053 Msa0426000:CDS 25.0%
! TGCAATTAAAATCAAATCAG+AGG + chr3_2:76431148-76431167 None:intergenic 25.0%
! TCTAACAATAGATCATCTTT+CGG + chr3_2:76431250-76431269 None:intergenic 25.0%
! ATTACAAAACAATTTCCAGA+CGG - chr3_2:76431808-76431827 Msa0426000:intron 25.0%
! ATAATTGTATTATAGGTCCT+TGG + chr3_2:76431896-76431915 None:intergenic 25.0%
! ACTGCTCATAATTGTATTAT+AGG + chr3_2:76431903-76431922 None:intergenic 25.0%
!!! ATTTGTCTCCATTTCTTTTT+TGG - chr3_2:76432480-76432499 Msa0426000:exon 25.0%
!!! TTTGTCTCCATTTCTTTTTT+GGG - chr3_2:76432481-76432500 Msa0426000:exon 25.0%
! ATATACGATGGATTTAAACG+CGG - chr3_2:76428833-76428852 Msa0426000:three_prime_UTR 30.0%
ATGAGTAAAGTAAAAGAAGG+AGG + chr3_2:76428948-76428967 None:intergenic 30.0%
GGAATAATTCAGAGGATTTA+AGG + chr3_2:76429017-76429036 None:intergenic 30.0%
ATTTACAGACATCAATCTCT+CGG + chr3_2:76429291-76429310 None:intergenic 30.0%
AGAGATTGATGTCTGTAAAT+GGG - chr3_2:76429291-76429310 Msa0426000:CDS 30.0%
AATATTTGCATAGATCGCAT+CGG - chr3_2:76429429-76429448 Msa0426000:intron 30.0%
TTACGGAAATAAGCTGAAAA+CGG + chr3_2:76429558-76429577 None:intergenic 30.0%
CAGAACTTATGAAAATAAGC+CGG - chr3_2:76429822-76429841 Msa0426000:CDS 30.0%
TCAAGTGCTTATCATATAAG+TGG + chr3_2:76429954-76429973 None:intergenic 30.0%
!!! TTTGCTGATTTTTCATCTGT+TGG - chr3_2:76430090-76430109 Msa0426000:CDS 30.0%
!!! TTGCTGATTTTTCATCTGTT+GGG - chr3_2:76430091-76430110 Msa0426000:CDS 30.0%
AAGGATCGTAAAATCAAATC+TGG - chr3_2:76430246-76430265 Msa0426000:CDS 30.0%
!!! AAGACTTTAGTTTTCTACAG+TGG - chr3_2:76430291-76430310 Msa0426000:CDS 30.0%
! TATTTCTTCTGGAGAGTAAT+TGG + chr3_2:76430613-76430632 None:intergenic 30.0%
AGAAGAAATACAATCTGATC+CGG - chr3_2:76430623-76430642 Msa0426000:intron 30.0%
! CAACTCTCAAAATTTTCAGA+GGG + chr3_2:76431096-76431115 None:intergenic 30.0%
! TCAACTCTCAAAATTTTCAG+AGG + chr3_2:76431097-76431116 None:intergenic 30.0%
TTATACTTGATATTTCCTGC+AGG - chr3_2:76431189-76431208 Msa0426000:intron 30.0%
CTAACAATAGATCATCTTTC+GGG + chr3_2:76431249-76431268 None:intergenic 30.0%
TGTCCTTAACATTTAACATG+GGG + chr3_2:76431462-76431481 None:intergenic 30.0%
CTGTCCTTAACATTTAACAT+GGG + chr3_2:76431463-76431482 None:intergenic 30.0%
ACTGTCCTTAACATTTAACA+TGG + chr3_2:76431464-76431483 None:intergenic 30.0%
ATGTTAAATGTTAAGGACAG+TGG - chr3_2:76431463-76431482 Msa0426000:CDS 30.0%
CTCTAACGACATTTATTGTT+CGG - chr3_2:76431537-76431556 Msa0426000:intron 30.0%
ATTTATTGTTCGGTCAATCT+TGG - chr3_2:76431547-76431566 Msa0426000:intron 30.0%
CACTTAAGTTTAGGAAACTA+CGG + chr3_2:76431598-76431617 None:intergenic 30.0%
CAGCTCAAACAATTAAATGT+GGG - chr3_2:76431619-76431638 Msa0426000:intron 30.0%
TTTCTTACCACAGCAATAAT+CGG + chr3_2:76432097-76432116 None:intergenic 30.0%
ATATCCCCATATGTTAGTAA+AGG + chr3_2:76432419-76432438 None:intergenic 30.0%
TGGAGACAAATAACAAACAA+AGG + chr3_2:76432471-76432490 None:intergenic 30.0%
TGTGTGTGCATATATATTGT+TGG - chr3_2:76432577-76432596 Msa0426000:five_prime_UTR 30.0%
GAATCAACGGAATAATTCAG+AGG + chr3_2:76429025-76429044 None:intergenic 35.0%
TTCTCTTGATTGTGTTCCAT+CGG - chr3_2:76429132-76429151 Msa0426000:three_prime_UTR 35.0%
TACTTACGTTCGAAGATCAA+TGG - chr3_2:76429241-76429260 Msa0426000:CDS 35.0%
GAGAGATTGATGTCTGTAAA+TGG - chr3_2:76429290-76429309 Msa0426000:CDS 35.0%
! CTTATTTCCGTAAGCTTTTC+TGG - chr3_2:76429565-76429584 Msa0426000:CDS 35.0%
!! AGCTGTTTTCATAAGTTCTC+CGG - chr3_2:76429869-76429888 Msa0426000:CDS 35.0%
!! TAAGTTTTGTGAGACTGTTC+CGG + chr3_2:76429891-76429910 None:intergenic 35.0%
TCAAATAAGCCAACCCAAAT+AGG - chr3_2:76429921-76429940 Msa0426000:intron 35.0%
AAGTGGTTATAGGCCTATTT+GGG + chr3_2:76429937-76429956 None:intergenic 35.0%
TAAGTGGTTATAGGCCTATT+TGG + chr3_2:76429938-76429957 None:intergenic 35.0%
!! GTTTGTTGTAGATTTGTCAG+TGG - chr3_2:76430113-76430132 Msa0426000:CDS 35.0%
TTGAACAGAGCAACAAATCA+TGG - chr3_2:76430204-76430223 Msa0426000:CDS 35.0%
AACAAATCATGGATACTGGA+AGG - chr3_2:76430215-76430234 Msa0426000:CDS 35.0%
! AAATCTGGAACCATCTTGAT+TGG - chr3_2:76430261-76430280 Msa0426000:CDS 35.0%
CTTCTTCATTCCAATCAAGA+TGG + chr3_2:76430274-76430293 None:intergenic 35.0%
AGAAAAGAATTTACCTGTCC+CGG + chr3_2:76430396-76430415 None:intergenic 35.0%
GACATATGGATTCTGATACA+AGG + chr3_2:76430502-76430521 None:intergenic 35.0%
AATAATCGACAGAGGACATA+TGG + chr3_2:76430516-76430535 None:intergenic 35.0%
! AGCATTGAAGTTTCAAACTG+TGG - chr3_2:76430552-76430571 Msa0426000:intron 35.0%
GGATCAGATTGTATTTCTTC+TGG + chr3_2:76430624-76430643 None:intergenic 35.0%
TGTGATGTGGATACTGTAAT+AGG + chr3_2:76430651-76430670 None:intergenic 35.0%
TATTACAGTATCCACATCAC+AGG - chr3_2:76430650-76430669 Msa0426000:intron 35.0%
CATATCTAATGCTGTAACCT+CGG - chr3_2:76430725-76430744 Msa0426000:intron 35.0%
!! GCTTGATAGTGAAATTCTTG+TGG + chr3_2:76431307-76431326 None:intergenic 35.0%
ACATTTAACATGGGGAAGTT+CGG + chr3_2:76431454-76431473 None:intergenic 35.0%
CTTCCCCATGTTAAATGTTA+AGG - chr3_2:76431456-76431475 Msa0426000:CDS 35.0%
GCAGTTACTTACAGTCATAT+TGG + chr3_2:76431518-76431537 None:intergenic 35.0%
! ACTACGGTGTGTTATTATCA+TGG + chr3_2:76431582-76431601 None:intergenic 35.0%
CGTAGTTTCCTAAACTTAAG+TGG - chr3_2:76431596-76431615 Msa0426000:intron 35.0%
GCAGCTCAAACAATTAAATG+TGG - chr3_2:76431618-76431637 Msa0426000:intron 35.0%
ATCATCACCACTGTAATCAA+AGG + chr3_2:76431768-76431787 None:intergenic 35.0%
CCAGTATTATTAACATCCGA+TGG + chr3_2:76431839-76431858 None:intergenic 35.0%
CCATCGGATGTTAATAATAC+TGG - chr3_2:76431836-76431855 Msa0426000:intron 35.0%
ACAATTATGAGCAGTGAAAG+TGG - chr3_2:76431908-76431927 Msa0426000:intron 35.0%
TGAAAGTGGAATTGTAAGGA+GGG - chr3_2:76431922-76431941 Msa0426000:intron 35.0%
! TTTAAGACAAATCCGATGCA+AGG - chr3_2:76431968-76431987 Msa0426000:intron 35.0%
AAGATTGAACATGTCTCATG+TGG - chr3_2:76432019-76432038 Msa0426000:intron 35.0%
AGATTGAACATGTCTCATGT+GGG - chr3_2:76432020-76432039 Msa0426000:intron 35.0%
TTCAAAACCGATTATTGCTG+TGG - chr3_2:76432087-76432106 Msa0426000:intron 35.0%
!!! GAGGTTTGTTTCTATTTTGC+AGG - chr3_2:76432168-76432187 Msa0426000:intron 35.0%
CTAATCATGCATGTAAACAG+AGG - chr3_2:76432242-76432261 Msa0426000:intron 35.0%
TCAATTGCAAATGCAAGCAA+GGG - chr3_2:76432277-76432296 Msa0426000:intron 35.0%
TAGCAGCCTTTACTAACATA+TGG - chr3_2:76432410-76432429 Msa0426000:CDS 35.0%
AGCAGCCTTTACTAACATAT+GGG - chr3_2:76432411-76432430 Msa0426000:CDS 35.0%
CAACTGTCCCAAAAAAGAAA+TGG + chr3_2:76432491-76432510 None:intergenic 35.0%
!!! TTTCTTTTTTGGGACAGTTG+AGG - chr3_2:76432491-76432510 Msa0426000:five_prime_UTR 35.0%
!!! TTCTTTTTTGGGACAGTTGA+GGG - chr3_2:76432492-76432511 Msa0426000:five_prime_UTR 35.0%
TCATACTGATAAAAGGGATG+TGG - chr3_2:76432731-76432750 Msa0426000:five_prime_UTR 35.0%
CAGAGGATTTAAGGATGTGA+TGG + chr3_2:76429008-76429027 None:intergenic 40.0%
TCTTTGAATTCGCTTCCGTT+AGG - chr3_2:76429178-76429197 Msa0426000:CDS 40.0%
CTTTGAATTCGCTTCCGTTA+GGG - chr3_2:76429179-76429198 Msa0426000:CDS 40.0%
CGTTCGAAGATCAATGGAAA+TGG - chr3_2:76429247-76429266 Msa0426000:CDS 40.0%
ATGCTCTCCAGAAAAGCTTA+CGG + chr3_2:76429575-76429594 None:intergenic 40.0%
!! AAACAGATCAAGGCCTTGTT+TGG + chr3_2:76430003-76430022 None:intergenic 40.0%
TTTGTCAGTGGTACGAAACA+AGG - chr3_2:76430125-76430144 Msa0426000:CDS 40.0%
GAGCAACAAATCATGGATAC+TGG - chr3_2:76430211-76430230 Msa0426000:CDS 40.0%
CAATTAGTCCTCTTCCCTTT+GGG + chr3_2:76430324-76430343 None:intergenic 40.0%
CAAAGGGAAGAGGACTAATT+GGG - chr3_2:76430323-76430342 Msa0426000:CDS 40.0%
GAAAAGAATTTACCTGTCCC+GGG + chr3_2:76430395-76430414 None:intergenic 40.0%
AGTTTCAAACTGTGGTGAAG+TGG - chr3_2:76430560-76430579 Msa0426000:intron 40.0%
TGTTATCCCTGATATCTCTG+AGG - chr3_2:76430698-76430717 Msa0426000:intron 40.0%
TGGTTTCCTCAGAGATATCA+GGG + chr3_2:76430707-76430726 None:intergenic 40.0%
ATGGTTTCCTCAGAGATATC+AGG + chr3_2:76430708-76430727 None:intergenic 40.0%
CGAGGTTACAGCATTAGATA+TGG + chr3_2:76430727-76430746 None:intergenic 40.0%
AATTGCAAAACTAGCTGCAG+AGG - chr3_2:76430794-76430813 Msa0426000:intron 40.0%
! CTCTCAAAATTTTCAGAGGG+AGG + chr3_2:76431093-76431112 None:intergenic 40.0%
TACTTGATATTTCCTGCAGG+AGG - chr3_2:76431192-76431211 Msa0426000:intron 40.0%
CAAGCGAACAATGAATCAGA+TGG - chr3_2:76431322-76431341 Msa0426000:CDS 40.0%
AATGAATCAGATGGTCGATG+TGG - chr3_2:76431331-76431350 Msa0426000:CDS 40.0%
ATGAATCAGATGGTCGATGT+GGG - chr3_2:76431332-76431351 Msa0426000:CDS 40.0%
AATGTTAAGGACAGTGGTTC+AGG - chr3_2:76431469-76431488 Msa0426000:CDS 40.0%
! TTGAGCTGCCACTTAAGTTT+AGG + chr3_2:76431607-76431626 None:intergenic 40.0%
AATTAAATGTGGGCTTGTCG+TGG - chr3_2:76431629-76431648 Msa0426000:intron 40.0%
TGGTTGCTCATATCCATTGA+CGG + chr3_2:76431876-76431895 None:intergenic 40.0%
TCAATGGATATGAGCAACCA+AGG - chr3_2:76431876-76431895 Msa0426000:intron 40.0%
GCAGTGAAAGTGGAATTGTA+AGG - chr3_2:76431918-76431937 Msa0426000:intron 40.0%
GTGAAAGTGGAATTGTAAGG+AGG - chr3_2:76431921-76431940 Msa0426000:intron 40.0%
TTAAATTGTTCGTCTCGTGC+TGG + chr3_2:76431953-76431972 None:intergenic 40.0%
GTACTGCTCAAAGGAGAATT+CGG - chr3_2:76431990-76432009 Msa0426000:intron 40.0%
! GTTTGCGTATTTTGCTTGCT+TGG - chr3_2:76432118-76432137 Msa0426000:intron 40.0%
! TTTTCTCTGCATGTGTTGTG+AGG - chr3_2:76432149-76432168 Msa0426000:intron 40.0%
TCATGCATGTAAACAGAGGA+AGG - chr3_2:76432246-76432265 Msa0426000:intron 40.0%
GTCAATTGCAAATGCAAGCA+AGG - chr3_2:76432276-76432295 Msa0426000:intron 40.0%
CAATTGCAAATGCAAGCAAG+GGG - chr3_2:76432278-76432297 Msa0426000:intron 40.0%
GAGGAAGTCTTTGATCTGAA+AGG + chr3_2:76432334-76432353 None:intergenic 40.0%
GCAGCCTTTACTAACATATG+GGG - chr3_2:76432412-76432431 Msa0426000:CDS 40.0%
!!! TCTTTTTTGGGACAGTTGAG+GGG - chr3_2:76432493-76432512 Msa0426000:five_prime_UTR 40.0%
GTCTTACATACTAGCCAACT+GGG + chr3_2:76432626-76432645 None:intergenic 40.0%
AGTCTTACATACTAGCCAAC+TGG + chr3_2:76432627-76432646 None:intergenic 40.0%
GGGATGTGGATAAAATTGCA+TGG - chr3_2:76432745-76432764 Msa0426000:five_prime_UTR 40.0%
GTGCTGTGTGATGTTACGTA+GGG + chr3_2:76428866-76428885 None:intergenic 45.0%
TGTGCTGTGTGATGTTACGT+AGG + chr3_2:76428867-76428886 None:intergenic 45.0%
TAAGTTCCTCGTCAGTAGGT+CGG + chr3_2:76429213-76429232 None:intergenic 45.0%
TCGATAAGTTCCTCGTCAGT+AGG + chr3_2:76429217-76429236 None:intergenic 45.0%
! GATCAATGGAAATGGTGACG+AGG - chr3_2:76429255-76429274 Msa0426000:CDS 45.0%
! ATGGAAATGGTGACGAGGTT+TGG - chr3_2:76429260-76429279 Msa0426000:CDS 45.0%
! TGGAAATGGTGACGAGGTTT+GGG - chr3_2:76429261-76429280 Msa0426000:CDS 45.0%
ATGTCTGTAAATGGGAACCC+TGG - chr3_2:76429299-76429318 Msa0426000:CDS 45.0%
TGTCTGTAAATGGGAACCCT+GGG - chr3_2:76429300-76429319 Msa0426000:CDS 45.0%
AAAATACCAGGCATGTCCCA+GGG + chr3_2:76429319-76429338 None:intergenic 45.0%
AAAAATACCAGGCATGTCCC+AGG + chr3_2:76429320-76429339 None:intergenic 45.0%
GCTTATACACAGGCTCTGTT+TGG - chr3_2:76429678-76429697 Msa0426000:CDS 45.0%
GGTTATAGGCCTATTTGGGT+TGG + chr3_2:76429933-76429952 None:intergenic 45.0%
AGTGGTACGAAACAAGGATC+CGG - chr3_2:76430131-76430150 Msa0426000:CDS 45.0%
TTTGGATACTTGCGATCCTG+AGG + chr3_2:76430174-76430193 None:intergenic 45.0%
CAGGATCGCAAGTATCCAAA+CGG - chr3_2:76430174-76430193 Msa0426000:CDS 45.0%
CTGTTCAATCGATGTCCGTT+TGG + chr3_2:76430192-76430211 None:intergenic 45.0%
ATGGATACTGGAAGGCAACA+GGG - chr3_2:76430223-76430242 Msa0426000:CDS 45.0%
CCAATTAGTCCTCTTCCCTT+TGG + chr3_2:76430325-76430344 None:intergenic 45.0%
CCAAAGGGAAGAGGACTAAT+TGG - chr3_2:76430322-76430341 Msa0426000:CDS 45.0%
GCAAACTACTTCAGCTCCTT+TGG - chr3_2:76430584-76430603 Msa0426000:intron 45.0%
GTGGATACTGTAATAGGAGC+CGG + chr3_2:76430645-76430664 None:intergenic 45.0%
AGTATCCACATCACAGGTCA+CGG - chr3_2:76430656-76430675 Msa0426000:intron 45.0%
ATCGCTATGGTAATCAACCG+AGG + chr3_2:76430745-76430764 None:intergenic 45.0%
TCGGTTGATTACCATAGCGA+TGG - chr3_2:76430744-76430763 Msa0426000:intron 45.0%
GAGCATCATATCCATCGCTA+TGG + chr3_2:76430758-76430777 None:intergenic 45.0%
ATATTTCCTGCAGGAGGATC+AGG - chr3_2:76431198-76431217 Msa0426000:intron 45.0%
CAGATTATTCTCCCCACCTT+TGG - chr3_2:76431273-76431292 Msa0426000:CDS 45.0%
TCTTGTGGCATATGCACCAA+AGG + chr3_2:76431292-76431311 None:intergenic 45.0%
ATTGTTCGGTCAATCTTGGC+AGG - chr3_2:76431551-76431570 Msa0426000:intron 45.0%
! TCAAAGGTGTGGCTAAACGA+CGG + chr3_2:76431752-76431771 None:intergenic 45.0%
AGCCACACCTTTGATTACAG+TGG - chr3_2:76431758-76431777 Msa0426000:intron 45.0%
CACCACTGTAATCAAAGGTG+TGG + chr3_2:76431763-76431782 None:intergenic 45.0%
! TTTCCAGACGGCTTTTCCAT+CGG - chr3_2:76431820-76431839 Msa0426000:intron 45.0%
GAAGTGTACAATGCCGTCAA+TGG - chr3_2:76431860-76431879 Msa0426000:intron 45.0%
CTTTGAGCAGTACCTTGCAT+CGG + chr3_2:76431983-76432002 None:intergenic 45.0%
TGAACATGTCTCATGTGGGA+TGG - chr3_2:76432024-76432043 Msa0426000:intron 45.0%
TGTCTCATGTGGGATGGTTA+AGG - chr3_2:76432030-76432049 Msa0426000:intron 45.0%
! ATTTTGCTTGCTTGGCCTAG+AGG - chr3_2:76432126-76432145 Msa0426000:intron 45.0%
CACATGCAGAGAAAACCTCT+AGG + chr3_2:76432144-76432163 None:intergenic 45.0%
TTTGCAGGAGAAGAAAGCTG+CGG - chr3_2:76432183-76432202 Msa0426000:intron 45.0%
AGCTGCGGAAAATCATGCTT+CGG - chr3_2:76432198-76432217 Msa0426000:intron 45.0%
TGTAGTTTCTGCATCTGTGC+TGG - chr3_2:76432381-76432400 Msa0426000:CDS 45.0%
TTACATACTAGCCAACTGGG+TGG + chr3_2:76432623-76432642 None:intergenic 45.0%
TGTGTTCCATCGGTCGATGA+TGG - chr3_2:76429142-76429161 Msa0426000:three_prime_UTR 50.0%
GTGTTCCATCGGTCGATGAT+GGG - chr3_2:76429143-76429162 Msa0426000:exon 50.0%
GGTCGGAATCGAAACCCTAA+CGG + chr3_2:76429196-76429215 None:intergenic 50.0%
! TCGCATCGGTAGTGTCTGTT+TGG - chr3_2:76429443-76429462 Msa0426000:intron 50.0%
TACGAAACAAGGATCCGGAG+TGG - chr3_2:76430136-76430155 Msa0426000:CDS 50.0%
GGACAGAAGAAGAACCACTC+CGG + chr3_2:76430153-76430172 None:intergenic 50.0%
GTGGTTCTTCTTCTGTCCTC+AGG - chr3_2:76430155-76430174 Msa0426000:CDS 50.0%
CATGGATACTGGAAGGCAAC+AGG - chr3_2:76430222-76430241 Msa0426000:CDS 50.0%
ATACTGGAAGGCAACAGGGA+AGG - chr3_2:76430227-76430246 Msa0426000:CDS 50.0%
GGTACCATCAAGCTCCTTGA+GGG + chr3_2:76430370-76430389 None:intergenic 50.0%
TGGTACCATCAAGCTCCTTG+AGG + chr3_2:76430371-76430390 None:intergenic 50.0%
AGAATTTACCTGTCCCGGGT+TGG + chr3_2:76430391-76430410 None:intergenic 50.0%
GGAGAGTAATTGGCAGCCAA+AGG + chr3_2:76430603-76430622 None:intergenic 50.0%
TGGCATATGCACCAAAGGTG+GGG + chr3_2:76431287-76431306 None:intergenic 50.0%
GTGGCATATGCACCAAAGGT+GGG + chr3_2:76431288-76431307 None:intergenic 50.0%
TGTGGCATATGCACCAAAGG+TGG + chr3_2:76431289-76431308 None:intergenic 50.0%
CTGGGATCAAATTCCCTGTG+AGG - chr3_2:76431411-76431430 Msa0426000:CDS 50.0%
! TGACTAACGGACACCTCACA+GGG + chr3_2:76431427-76431446 None:intergenic 50.0%
GAAGTTCGGCTGGTGACTAA+CGG + chr3_2:76431440-76431459 None:intergenic 50.0%
TTAACATGGGGAAGTTCGGC+TGG + chr3_2:76431450-76431469 None:intergenic 50.0%
CAGTGGTTCAGGAAGCAACT+CGG - chr3_2:76431480-76431499 Msa0426000:intron 50.0%
TTCAGGAAGCAACTCGGATG+TGG - chr3_2:76431486-76431505 Msa0426000:intron 50.0%
CTTCTGTCAATTGCCTCGTG+AGG + chr3_2:76431710-76431729 None:intergenic 50.0%
CTCACGAGGCAATTGACAGA+AGG - chr3_2:76431708-76431727 Msa0426000:intron 50.0%
!! AACGACGGTGTTGTCGCAAA+AGG + chr3_2:76431737-76431756 None:intergenic 50.0%
!! CGATGCAAGGTACTGCTCAA+AGG - chr3_2:76431981-76432000 Msa0426000:intron 50.0%
AGAAGACCACAGAGCACAGT+TGG + chr3_2:76432356-76432375 None:intergenic 50.0%
!!! TTTTTGGGACAGTTGAGGGG+AGG - chr3_2:76432496-76432515 Msa0426000:five_prime_UTR 50.0%
ATACTAGCCAACTGGGTGGT+GGG + chr3_2:76432619-76432638 None:intergenic 50.0%
!! TCCATCGGTCGATGATGGGA+TGG - chr3_2:76429147-76429166 Msa0426000:exon 55.0%
!! ATCGGTCGATGATGGGATGG+CGG - chr3_2:76429150-76429169 Msa0426000:exon 55.0%
TCGATTCCGACCTACTGACG+AGG - chr3_2:76429204-76429223 Msa0426000:CDS 55.0%
TACAGTGGTCGTGCACCCAA+AGG - chr3_2:76430306-76430325 Msa0426000:CDS 55.0%
ACAGTGGTCGTGCACCCAAA+GGG - chr3_2:76430307-76430326 Msa0426000:CDS 55.0%
! TGAGTATCGTCCCACCCTCA+AGG - chr3_2:76430353-76430372 Msa0426000:CDS 55.0%
CCATCAAGCTCCTTGAGGGT+GGG + chr3_2:76430366-76430385 None:intergenic 55.0%
ACCATCAAGCTCCTTGAGGG+TGG + chr3_2:76430367-76430386 None:intergenic 55.0%
! GGAGCTTGATGGTACCAACC+CGG - chr3_2:76430374-76430393 Msa0426000:CDS 55.0%
! GAGCTTGATGGTACCAACCC+GGG - chr3_2:76430375-76430394 Msa0426000:CDS 55.0%
CTCTTCCGTGACCTGTGATG+TGG + chr3_2:76430664-76430683 None:intergenic 55.0%
CACATCACAGGTCACGGAAG+AGG - chr3_2:76430662-76430681 Msa0426000:intron 55.0%
CACGGAAGAGGATAAGCAGC+TGG - chr3_2:76430674-76430693 Msa0426000:intron 55.0%
GGTCGATGTGGGCTTCAGTA+TGG - chr3_2:76431343-76431362 Msa0426000:CDS 55.0%
! GTGACTAACGGACACCTCAC+AGG + chr3_2:76431428-76431447 None:intergenic 55.0%
GCAAGCTGCTTATCCTCACG+AGG - chr3_2:76431694-76431713 Msa0426000:intron 55.0%
CATCCGATGGAAAAGCCGTC+TGG + chr3_2:76431826-76431845 None:intergenic 55.0%
GTGGAATTGTAAGGAGGGCC+CGG - chr3_2:76431927-76431946 Msa0426000:intron 55.0%
! ATTGTTCGTCTCGTGCTGGC+CGG + chr3_2:76431949-76431968 None:intergenic 55.0%
CTTCCTCCAACTGTGCTCTG+TGG - chr3_2:76432347-76432366 Msa0426000:CDS 55.0%
AGACCACAGAGCACAGTTGG+AGG + chr3_2:76432353-76432372 None:intergenic 55.0%
! ACAGTTGAGGGGAGGCATGT+AGG - chr3_2:76432504-76432523 Msa0426000:five_prime_UTR 55.0%
! CAGTTGAGGGGAGGCATGTA+GGG - chr3_2:76432505-76432524 Msa0426000:five_prime_UTR 55.0%
TGTATCACCCACCACCCAGT+TGG - chr3_2:76432609-76432628 Msa0426000:five_prime_UTR 55.0%
CATACTAGCCAACTGGGTGG+TGG + chr3_2:76432620-76432639 None:intergenic 55.0%
GGAACACGAGTGCGCGATGA+AGG + chr3_2:76428927-76428946 None:intergenic 60.0%
GCCATCCCATCATCGACCGA+TGG + chr3_2:76429151-76429170 None:intergenic 60.0%
GTCGTGCACCCAAAGGGAAG+AGG - chr3_2:76430313-76430332 Msa0426000:CDS 60.0%
CCCACCCTCAAGGAGCTTGA+TGG - chr3_2:76430363-76430382 Msa0426000:CDS 60.0%
TGATGGTACCAACCCGGGAC+AGG - chr3_2:76430380-76430399 Msa0426000:CDS 60.0%
TCAACGCCTGATCCTCCTGC+AGG + chr3_2:76431207-76431226 None:intergenic 60.0%
! TTGTTCGTCTCGTGCTGGCC+GGG + chr3_2:76431948-76431967 None:intergenic 60.0%
TGGGAACCCTGGGACATGCC+TGG - chr3_2:76429310-76429329 Msa0426000:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 76428827 76432785 76428827 ID=Msa0426000;Name=Msa0426000
chr3_2 mRNA 76428827 76432785 76428827 ID=Msa0426000-mRNA-1;Parent=Msa0426000;Name=Msa0426000-mRNA-1;_AED=0.33;_eAED=0.33;_QI=300|1|1|1|1|1|6|335|594
chr3_2 exon 76428827 76429422 76428827 ID=Msa0426000-mRNA-1:exon:19729;Parent=Msa0426000-mRNA-1
chr3_2 exon 76429504 76429923 76429504 ID=Msa0426000-mRNA-1:exon:19728;Parent=Msa0426000-mRNA-1
chr3_2 exon 76430087 76430401 76430087 ID=Msa0426000-mRNA-1:exon:19727;Parent=Msa0426000-mRNA-1
chr3_2 exon 76430797 76431102 76430797 ID=Msa0426000-mRNA-1:exon:19726;Parent=Msa0426000-mRNA-1
chr3_2 exon 76431211 76431488 76431211 ID=Msa0426000-mRNA-1:exon:19725;Parent=Msa0426000-mRNA-1
chr3_2 exon 76432281 76432785 76432281 ID=Msa0426000-mRNA-1:exon:19724;Parent=Msa0426000-mRNA-1
chr3_2 five_prime_UTR 76432486 76432785 76432486 ID=Msa0426000-mRNA-1:five_prime_utr;Parent=Msa0426000-mRNA-1
chr3_2 CDS 76432281 76432485 76432281 ID=Msa0426000-mRNA-1:cds;Parent=Msa0426000-mRNA-1
chr3_2 CDS 76431211 76431488 76431211 ID=Msa0426000-mRNA-1:cds;Parent=Msa0426000-mRNA-1
chr3_2 CDS 76430797 76431102 76430797 ID=Msa0426000-mRNA-1:cds;Parent=Msa0426000-mRNA-1
chr3_2 CDS 76430087 76430401 76430087 ID=Msa0426000-mRNA-1:cds;Parent=Msa0426000-mRNA-1
chr3_2 CDS 76429504 76429923 76429504 ID=Msa0426000-mRNA-1:cds;Parent=Msa0426000-mRNA-1
chr3_2 CDS 76429162 76429422 76429162 ID=Msa0426000-mRNA-1:cds;Parent=Msa0426000-mRNA-1
chr3_2 three_prime_UTR 76428827 76429161 76428827 ID=Msa0426000-mRNA-1:three_prime_utr;Parent=Msa0426000-mRNA-1
Gene Sequence

>Msa0426000

ATGGGTTCTCTTGATTGTGTTCCATCGGTCGATGATGGGATGGCGGTGTTGTCTTTGAATTCGCTTCCGTTAGGGTTTCGATTCCGACCTACTGACGAGGAACTTATCGATTACTACTTACGTTCGAAGATCAATGGAAATGGTGACGAGGTTTGGGTTATCCGAGAGATTGATGTCTGTAAATGGGAACCCTGGGACATGCCTGATTTGTCAGTGGTACGAAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCTCAGGATCGCAAGTATCCAAACGGACATCGATTGAACAGAGCAACAAATCATGGATACTGGAAGGCAACAGGGAAGGATCGTAAAATCAAATCTGGAACCATCTTGATTGGAATGAAGAAGACTTTAGTTTTCTACAGTGGTCGTGCACCCAAAGGGAAGAGGACTAATTGGGTTATGCATGAGTATCGTCCCACCCTCAAGGAGCTTGATGGTACCAACCCGGGACAGAATCCATATGTCCTCTGTCGATTATTTAAGAAAAACGATGAGAGCATTGAAGTTTCAAACTGTGGTGAAGTGGAGCAAACTACTTCAGCTCCTTTGGCTGCCAATTACTCTCCAGAAGAAATACAATCTGATCCGGCTCCTATTACAGTATCCACATCACAGGTCACGGAAGAGGATAAGCAGCTGGCTGTTATCCCTGATATCTCTGAGGAAACCATATCTAATGCTGTAACCTCGGTTGATTACCATAGCGATGGATATGATGCTCATGATGTCCAAAATCAAATTGCAAAACTAGCTGCAGAGGAGGATCAGGCGTTGAACTTTGACATGTATTATAACCCGAAAGATGATCTATTGTTAGATGACAGATTATTCTCCCCACCTTTGGTGCATATGCCACAAGAATTTCACTATCAAGCGAACAATGAATCAGATGGTCGATGTGGGCTTCAGTATGGTACAAATGAGATAAATATTTCAGACTTTTTAAATTATGATCTTAACTGGGATCAAATTCCCTGTGAGGTGTCCGTTAGTCACCAGCCGAACTTCCCCATGTTAAATGTTAAGGACAGTGGTTCAGGAAGCAACTCGGATGTGGAAGTAGCCAATATGACTGGTATGCAAGCTGCTTATCCTCACGAGGCAATTGACAGAAGGATTCCTTTTGCGACAACACCGTCGTTTAGCCACACCTTTGATTACAGTGGTGATGATCAAAAGAGCAATGTTGTTTTATTACAAAACAATTTCCAGACGGCTTTTCCATCGGATGTTAATAATACTGGTGAAGTGTACAATGCCGTCAATGGATATGAGCAACCAAGGACCTATAATACAATTATGAGCAGTGAAAGTGGAATTGTAAGGAGGGCCCGGCCAGCACGAGACGAACAATTTAAGACAAATCCGATGCAAGGTACTGCTCAAAGGAGAATTCGGTTGTCAAAGATTGAACATGTCTCATGTGGGATGGTTAAGGTTAAAGATGAGAGTTGTACACAAGAACAACATAATTCAAAACCGATTATTGCTGTGGAGAAGAAAGCTGCGGAAAATCATGCTTCGGATGATGAAAGTGCTATTTGTACTAATCATGCATGTAAACAGAGGAAGGTTCACAAGTCAATTGCAAATGCAAGCAAGGGGTTAAGAAATTTTTTATTGCTAGGAAGAGCACCTTTCAGATCAAAGACTTCCTCCAACTGTGCTCTGTGGTCTTCTGTTTTTGTAGTTTCTGCATCTGTGCTGGTTTCATTAGCAGCCTTTACTAACATATGGGGATATCTTAAATTTTGA
Protein sequence

>Msa0426000

MGSLDCVPSVDDGMAVLSLNSLPLGFRFRPTDEELIDYYLRSKINGNGDEVWVIREIDVCKWEPWDMPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGTILIGMKKTLVFYSGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKNDESIEVSNCGEVEQTTSAPLAANYSPEEIQSDPAPITVSTSQVTEEDKQLAVIPDISEETISNAVTSVDYHSDGYDAHDVQNQIAKLAAEEDQALNFDMYYNPKDDLLLDDRLFSPPLVHMPQEFHYQANNESDGRCGLQYGTNEINISDFLNYDLNWDQIPCEVSVSHQPNFPMLNVKDSGSGSNSDVEVANMTGMQAAYPHEAIDRRIPFATTPSFSHTFDYSGDDQKSNVVLLQNNFQTAFPSDVNNTGEVYNAVNGYEQPRTYNTIMSSESGIVRRARPARDEQFKTNPMQGTAQRRIRLSKIEHVSCGMVKVKDESCTQEQHNSKPIIAVEKKAAENHASDDESAICTNHACKQRKVHKSIANASKGLRNFLLLGRAPFRSKTSSNCALWSSVFVVSASVLVSLAAFTNIWGYLKF*