AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0516950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0516950 MtrunA17_Chr3g0128151 98.316 594 9 1 1 594 1 593 0.0 1222
Msa0516950 MtrunA17_Chr5g0428991 47.833 646 241 14 1 576 1 620 0.0 546
Msa0516950 MtrunA17_Chr3g0128111 84.615 208 25 1 25 232 45 245 7.70e-128 375
Msa0516950 MtrunA17_Chr6g0481091 48.636 220 106 3 17 232 1 217 6.48e-61 202
Msa0516950 MtrunA17_Chr3g0109821 62.092 153 57 1 21 172 5 157 8.68e-59 208
Msa0516950 MtrunA17_Chr2g0309891 49.029 206 78 4 21 220 5 189 1.41e-56 194
Msa0516950 MtrunA17_Chr5g0433781 60.526 152 60 0 21 172 5 156 2.12e-56 201
Msa0516950 MtrunA17_Chr5g0400461 55.828 163 62 3 21 176 5 164 1.75e-53 185
Msa0516950 MtrunA17_Chr1g0201021 52.601 173 79 2 1 173 1 170 2.55e-50 182
Msa0516950 MtrunA17_Chr4g0054791 54.268 164 70 3 21 180 5 167 2.73e-50 176
Msa0516950 MtrunA17_Chr8g0345691 54.487 156 62 4 18 170 8 157 3.59e-50 179
Msa0516950 MtrunA17_Chr8g0364791 50.641 156 77 0 17 172 1 156 1.49e-49 178
Msa0516950 MtrunA17_Chr8g0345671 56.954 151 56 5 22 169 11 155 3.59e-49 176
Msa0516950 MtrunA17_Chr3g0092671 53.797 158 70 3 17 173 1 156 6.40e-49 178
Msa0516950 MtrunA17_Chr5g0398971 50.000 156 75 3 19 172 4 158 7.83e-49 173
Msa0516950 MtrunA17_Chr3g0091921 43.721 215 99 4 22 221 16 223 8.05e-49 172
Msa0516950 MtrunA17_Chr4g0018391 51.282 156 73 3 18 172 3 156 9.57e-49 173
Msa0516950 MtrunA17_Chr1g0197361 54.667 150 66 2 25 173 11 159 1.14e-48 178
Msa0516950 MtrunA17_Chr4g0060931 54.902 153 65 2 22 172 17 167 1.28e-48 173
Msa0516950 MtrunA17_Chr1g0197351 54.375 160 67 1 21 174 41 200 2.37e-48 175
Msa0516950 MtrunA17_Chr3g0130101 42.654 211 97 3 25 220 10 211 3.06e-48 172
Msa0516950 MtrunA17_Chr4g0056541 46.061 165 86 2 18 181 3 165 1.05e-47 171
Msa0516950 MtrunA17_Chr8g0372121 49.673 153 74 2 22 173 6 156 1.31e-47 169
Msa0516950 MtrunA17_Chr6g0453451 52.727 165 67 3 22 184 20 175 1.92e-47 169
Msa0516950 MtrunA17_Chr7g0217721 42.795 229 96 7 25 232 22 236 8.59e-47 168
Msa0516950 MtrunA17_Chr6g0484441 52.318 151 68 2 22 172 5 151 1.29e-46 166
Msa0516950 MtrunA17_Chr4g0017921 50.641 156 71 3 21 174 7 158 2.19e-46 167
Msa0516950 MtrunA17_Chr5g0405211 50.658 152 72 2 22 172 8 157 3.43e-46 166
Msa0516950 MtrunA17_Chr8g0384201 47.436 156 82 0 17 172 1 156 3.45e-46 169
Msa0516950 MtrunA17_Chr7g0217711 58.871 124 49 1 25 148 22 143 8.58e-46 159
Msa0516950 MtrunA17_Chr2g0309331 49.359 156 75 3 21 174 9 162 2.03e-45 164
Msa0516950 MtrunA17_Chr8g0361731 47.273 165 74 4 25 178 17 179 2.84e-45 165
Msa0516950 MtrunA17_Chr2g0318081 48.750 160 80 1 17 176 11 168 4.89e-45 163
Msa0516950 MtrunA17_Chr4g0042561 50.955 157 67 3 22 172 9 161 5.59e-45 160
Msa0516950 MtrunA17_Chr3g0139331 54.545 154 64 3 21 172 10 159 5.82e-45 162
Msa0516950 MtrunA17_Chr1g0200561 50.658 152 72 2 22 172 19 168 6.83e-45 162
Msa0516950 MtrunA17_Chr6g0461661 47.977 173 76 4 22 190 18 180 8.20e-45 163
Msa0516950 MtrunA17_Chr8g0384721 37.410 278 134 10 22 265 7 278 3.64e-44 159
Msa0516950 MtrunA17_Chr3g0130731 45.902 183 78 6 22 197 7 175 5.10e-44 158
Msa0516950 MtrunA17_Chr5g0417001 45.732 164 77 4 25 178 17 178 5.82e-44 161
Msa0516950 MtrunA17_Chr2g0316971 50.617 162 64 4 22 174 23 177 6.58e-44 160
Msa0516950 MtrunA17_Chr5g0417791 50.000 162 65 3 22 174 3 157 9.67e-44 157
Msa0516950 MtrunA17_Chr1g0147421 52.903 155 66 4 21 172 26 176 1.05e-43 159
Msa0516950 MtrunA17_Chr3g0124761 50.641 156 67 4 22 172 7 157 1.59e-43 157
Msa0516950 MtrunA17_Chr8g0359921 50.920 163 74 3 17 176 9 168 1.76e-43 158
Msa0516950 MtrunA17_Chr7g0253011 50.920 163 62 4 22 173 17 172 2.99e-43 159
Msa0516950 MtrunA17_Chr7g0252971 47.283 184 77 5 22 187 8 189 4.47e-43 157
Msa0516950 MtrunA17_Chr4g0076731 49.664 149 70 3 25 172 57 201 8.20e-43 159
Msa0516950 MtrunA17_Chr2g0318101 45.181 166 76 3 22 174 15 178 1.73e-42 156
Msa0516950 MtrunA17_Chr2g0312321 48.750 160 67 4 22 175 11 161 2.23e-42 154
Msa0516950 MtrunA17_Chr6g0453131 35.496 262 142 7 14 264 7 252 2.44e-42 157
Msa0516950 MtrunA17_Chr8g0346001 43.787 169 85 2 14 172 7 175 1.42e-41 155
Msa0516950 MtrunA17_Chr7g0214071 50.000 154 66 4 22 172 15 160 4.30e-41 149
Msa0516950 MtrunA17_Chr2g0321741 50.000 144 59 3 43 181 13 148 3.25e-40 150
Msa0516950 MtrunA17_Chr4g0047841 44.444 180 73 4 22 176 15 192 4.26e-40 149
Msa0516950 MtrunA17_Chr7g0263931 43.229 192 97 5 22 203 11 200 6.65e-40 148
Msa0516950 MtrunA17_Chr8g0345731 53.030 132 55 4 22 147 24 154 1.71e-39 142
Msa0516950 MtrunA17_Chr2g0326361 45.251 179 85 6 21 192 13 185 3.89e-39 146
Msa0516950 MtrunA17_Chr3g0144271 55.385 130 53 3 22 148 23 150 4.25e-39 148
Msa0516950 MtrunA17_Chr1g0183741 47.403 154 73 3 21 172 9 156 5.05e-39 144
Msa0516950 MtrunA17_Chr8g0345711 50.355 141 66 3 20 157 10 149 6.27e-39 140
Msa0516950 MtrunA17_Chr3g0113001 38.739 222 121 6 77 286 18 236 5.13e-37 139
Msa0516950 MtrunA17_Chr7g0261411 46.711 152 73 3 21 170 9 154 5.35e-37 139
Msa0516950 MtrunA17_Chr8g0385991 43.195 169 81 4 19 178 11 173 1.39e-36 136
Msa0516950 MtrunA17_Chr4g0038751 45.806 155 73 4 21 172 15 161 1.92e-36 138
Msa0516950 MtrunA17_Chr5g0442771 46.626 163 72 6 22 172 19 178 3.44e-36 137
Msa0516950 MtrunA17_Chr2g0311651 40.984 183 87 6 9 173 8 187 5.56e-36 137
Msa0516950 MtrunA17_Chr2g0311661 40.556 180 86 6 12 173 10 186 2.12e-35 135
Msa0516950 MtrunA17_Chr3g0131911 42.353 170 84 3 19 178 11 176 1.09e-34 131
Msa0516950 MtrunA17_Chr8g0345741 46.099 141 67 4 33 170 2 136 2.23e-33 125
Msa0516950 MtrunA17_Chr8g0345701 50.000 144 52 6 21 147 6 146 1.12e-32 123
Msa0516950 MtrunA17_Chr8g0345721 41.026 156 59 4 24 147 37 191 7.47e-31 119
Msa0516950 MtrunA17_Chr4g0026141 40.764 157 84 5 22 170 5 160 4.98e-30 119
Msa0516950 MtrunA17_Chr2g0321631 40.385 156 85 5 23 170 5 160 1.47e-29 117
Msa0516950 MtrunA17_Chr7g0266701 37.349 166 92 6 19 173 1 165 6.76e-29 115
Msa0516950 MtrunA17_Chr3g0113031 37.559 213 117 7 87 286 3 212 6.78e-29 115
Msa0516950 MtrunA17_Chr7g0243371 51.351 74 34 1 77 148 17 90 2.31e-20 87.0
Msa0516950 MtrunA17_Chr4g0050701 35.659 129 71 3 22 148 11 129 9.88e-19 84.7
Msa0516950 MtrunA17_Chr7g0251651 34.058 138 81 4 11 147 13 141 9.43e-16 76.3
Msa0516950 MtrunA17_Chr3g0130321 33.333 165 84 7 22 171 7 160 7.17e-14 70.9
Msa0516950 MtrunA17_Chr7g0251661 32.283 127 82 3 22 147 10 133 2.73e-12 65.1
Msa0516950 MtrunA17_Chr2g0282871 29.814 161 92 6 10 153 41 197 2.15e-11 65.5
Msa0516950 MtrunA17_Chr4g0040541 28.395 162 88 6 7 147 33 187 3.31e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0516950 AT4G35580.1 39.417 515 242 16 14 524 1 449 1.81e-93 296
Msa0516950 AT4G35580.2 39.189 518 239 16 14 524 1 449 2.68e-93 297
Msa0516950 AT4G35580.3 39.189 518 239 16 14 524 1 449 3.06e-93 296
Msa0516950 AT1G33060.1 65.000 200 69 1 7 205 9 208 7.64e-89 288
Msa0516950 AT1G33060.2 65.000 200 69 1 7 205 9 208 7.80e-89 288
Msa0516950 AT3G49530.1 48.438 320 138 8 14 326 5 304 1.27e-85 275
Msa0516950 AT3G49530.2 48.438 320 138 8 14 326 5 304 1.51e-85 273
Msa0516950 AT5G24590.2 55.274 237 89 4 10 230 1 236 4.24e-84 270
Msa0516950 AT3G17730.1 60.131 153 61 0 21 173 5 157 7.22e-61 202
Msa0516950 AT1G65910.1 47.083 240 112 4 21 249 5 240 4.29e-59 208
Msa0516950 AT5G17260.1 61.438 153 58 1 21 172 5 157 7.51e-57 199
Msa0516950 AT3G03200.1 61.438 153 58 1 21 172 5 157 8.15e-56 196
Msa0516950 AT4G17980.1 42.169 249 118 6 20 244 4 250 1.04e-54 187
Msa0516950 AT4G17980.2 42.510 247 116 6 22 244 6 250 2.00e-54 187
Msa0516950 AT3G10490.1 56.774 155 66 1 21 174 26 180 2.14e-54 185
Msa0516950 AT3G10480.2 53.892 167 77 0 8 174 13 179 2.66e-54 191
Msa0516950 AT3G10480.1 54.706 170 72 2 8 174 13 180 3.74e-54 191
Msa0516950 AT3G10490.2 56.774 155 66 1 21 174 26 180 3.89e-53 188
Msa0516950 AT5G46590.1 56.688 157 62 3 22 174 6 160 1.21e-52 182
Msa0516950 AT3G10500.1 54.375 160 73 0 14 173 1 160 1.54e-52 189
Msa0516950 AT1G54330.1 57.516 153 62 1 21 173 5 154 1.49e-51 179
Msa0516950 AT5G04410.1 52.500 160 76 0 14 173 1 160 3.43e-51 185
Msa0516950 AT5G07680.2 47.525 202 87 5 22 211 3 197 1.77e-50 177
Msa0516950 AT5G07680.1 47.525 202 87 5 22 211 17 211 2.04e-50 177
Msa0516950 AT5G46590.2 61.719 128 48 1 22 148 6 133 5.36e-50 174
Msa0516950 AT5G61430.1 42.982 228 115 5 22 245 16 232 9.12e-50 176
Msa0516950 AT5G39610.1 54.375 160 69 2 22 179 20 177 2.11e-49 173
Msa0516950 AT1G12260.2 51.282 156 73 3 18 172 3 156 9.54e-49 173
Msa0516950 AT1G62700.1 51.282 156 73 3 18 172 3 156 9.94e-49 174
Msa0516950 AT1G62700.2 51.282 156 73 3 18 172 3 156 9.94e-49 174
Msa0516950 AT1G12260.1 51.282 156 73 3 18 172 3 156 1.99e-48 174
Msa0516950 AT5G62380.2 48.485 165 82 2 18 181 3 165 2.73e-48 172
Msa0516950 AT5G62380.1 48.485 165 82 2 18 181 3 165 2.73e-48 172
Msa0516950 AT4G10350.1 49.383 162 81 1 14 174 1 162 4.14e-48 171
Msa0516950 AT3G10480.3 45.813 203 72 3 8 174 13 213 7.07e-48 176
Msa0516950 AT2G27300.1 50.633 158 70 3 17 174 9 158 9.80e-48 170
Msa0516950 AT1G32510.1 50.303 165 74 2 22 178 6 170 3.04e-47 167
Msa0516950 AT2G18060.3 51.634 153 71 2 21 172 8 158 3.41e-47 169
Msa0516950 AT2G18060.1 51.634 153 71 2 21 172 8 158 3.41e-47 169
Msa0516950 AT3G18400.1 53.289 152 66 3 22 172 5 152 4.75e-47 168
Msa0516950 AT3G29035.1 56.291 151 62 3 22 170 24 172 5.11e-47 168
Msa0516950 AT1G33280.1 51.948 154 70 2 22 174 8 158 6.01e-47 167
Msa0516950 AT4G36160.1 42.857 196 105 3 21 215 9 198 6.67e-47 169
Msa0516950 AT4G36160.3 42.857 196 105 3 21 215 9 198 6.67e-47 169
Msa0516950 AT4G36160.2 42.857 196 105 3 21 215 13 202 6.96e-47 169
Msa0516950 AT3G04060.1 48.588 177 76 4 22 190 20 189 8.58e-47 168
Msa0516950 AT3G44290.2 52.318 151 63 3 25 175 17 158 1.34e-46 164
Msa0516950 AT2G24430.2 53.165 158 69 3 21 176 15 169 1.48e-46 166
Msa0516950 AT2G24430.1 53.165 158 69 3 21 176 15 169 1.48e-46 166
Msa0516950 AT5G22290.1 48.780 164 76 3 12 175 11 166 1.98e-46 167
Msa0516950 AT5G18270.2 52.795 161 71 3 19 176 18 176 6.50e-46 165
Msa0516950 AT3G44290.1 52.318 151 63 3 25 175 17 158 9.57e-46 165
Msa0516950 AT5G18270.1 52.795 161 71 3 19 176 18 176 9.96e-46 165
Msa0516950 AT4G27410.2 49.375 160 79 1 17 176 9 166 1.87e-45 163
Msa0516950 AT5G09330.5 40.081 247 135 6 25 267 9 246 2.01e-45 168
Msa0516950 AT5G09330.2 40.081 247 135 6 25 267 9 246 2.01e-45 168
Msa0516950 AT5G09330.4 40.081 247 135 6 25 267 9 246 2.01e-45 168
Msa0516950 AT5G09330.3 40.081 247 135 6 25 267 9 246 2.01e-45 168
Msa0516950 AT5G09330.1 40.081 247 135 6 25 267 9 246 2.01e-45 168
Msa0516950 AT1G69490.1 48.521 169 77 3 14 176 1 165 2.64e-45 161
Msa0516950 AT5G66300.1 49.351 154 76 2 21 173 11 163 3.63e-45 162
Msa0516950 AT5G64060.1 47.134 157 83 0 17 173 1 157 1.16e-44 162
Msa0516950 AT1G56010.2 46.032 189 84 6 22 199 19 200 3.20e-44 160
Msa0516950 AT3G12977.1 49.375 160 76 4 22 179 18 174 4.51e-44 159
Msa0516950 AT3G15170.1 50.932 161 63 4 22 173 20 173 4.86e-44 159
Msa0516950 AT1G71930.2 49.673 153 74 2 21 172 8 158 5.31e-44 160
Msa0516950 AT1G71930.1 49.673 153 74 2 21 172 8 158 5.31e-44 160
Msa0516950 AT5G08790.1 43.689 206 96 5 22 220 7 199 7.54e-44 158
Msa0516950 AT1G34190.1 53.020 149 70 0 25 173 19 167 9.20e-44 164
Msa0516950 AT1G76420.1 49.383 162 77 3 21 180 21 179 1.04e-43 159
Msa0516950 AT1G34180.3 51.678 149 72 0 25 173 19 167 1.84e-43 161
Msa0516950 AT2G02450.2 50.336 149 69 3 25 172 54 198 2.18e-43 160
Msa0516950 AT2G02450.1 50.336 149 69 3 25 172 54 198 2.22e-43 159
Msa0516950 AT2G33480.1 52.632 152 65 3 22 172 15 160 3.28e-43 156
Msa0516950 AT3G15500.1 49.359 156 77 1 17 172 9 162 4.37e-43 157
Msa0516950 AT3G04070.2 46.067 178 82 5 20 185 8 183 4.79e-43 157
Msa0516950 AT1G52890.1 49.359 156 77 1 17 172 9 162 5.68e-43 157
Msa0516950 AT1G34180.1 51.678 149 72 0 25 173 19 167 7.72e-43 162
Msa0516950 AT4G27410.3 45.143 175 81 1 17 176 9 183 1.06e-42 156
Msa0516950 AT1G26870.1 44.785 163 77 3 25 176 19 179 1.18e-42 159
Msa0516950 AT2G46770.1 40.394 203 98 4 14 193 8 210 1.60e-42 157
Msa0516950 AT1G01720.1 48.750 160 71 4 19 172 4 158 1.75e-42 154
Msa0516950 AT5G53950.1 50.932 161 63 4 22 173 17 170 2.89e-42 156
Msa0516950 AT5G13180.1 46.199 171 79 4 4 172 1 160 3.70e-42 152
Msa0516950 AT2G33480.2 50.993 151 67 2 22 172 15 158 6.23e-42 152
Msa0516950 AT1G32770.1 38.298 235 110 7 12 226 3 222 8.16e-42 155
Msa0516950 AT5G63790.1 50.314 159 67 5 21 172 49 202 1.00e-41 153
Msa0516950 AT5G63790.2 50.314 159 67 5 21 172 59 212 1.12e-41 153
Msa0516950 AT5G39820.1 43.931 173 72 5 25 174 23 193 1.74e-41 153
Msa0516950 AT1G77450.1 48.077 156 71 4 22 172 10 160 3.27e-41 150
Msa0516950 AT2G43000.1 47.097 155 78 3 20 172 15 167 5.58e-41 150
Msa0516950 AT1G61110.1 48.485 165 70 4 22 173 16 178 1.13e-40 150
Msa0516950 AT3G04070.1 42.487 193 81 5 21 185 9 199 1.58e-40 151
Msa0516950 AT1G34180.4 47.826 161 72 1 25 173 19 179 3.08e-40 153
Msa0516950 AT3G15510.1 44.379 169 79 3 26 181 21 187 3.27e-40 150
Msa0516950 AT1G79580.3 47.134 157 78 3 21 175 16 169 4.08e-40 150
Msa0516950 AT1G79580.5 47.134 157 78 3 21 175 16 169 4.08e-40 150
Msa0516950 AT1G79580.4 47.134 157 78 3 21 175 16 169 4.08e-40 150
Msa0516950 AT1G79580.2 47.134 157 78 3 21 175 16 169 4.08e-40 150
Msa0516950 AT1G79580.1 47.134 157 78 3 21 175 16 169 4.08e-40 150
Msa0516950 AT3G61910.1 42.135 178 83 3 14 174 3 177 4.82e-40 149
Msa0516950 AT1G34180.2 47.826 161 72 1 25 173 19 179 1.16e-39 153
Msa0516950 AT2G17040.1 46.358 151 71 3 25 172 9 152 6.90e-38 141
Msa0516950 AT4G28530.1 37.387 222 115 4 22 225 10 225 2.99e-37 142
Msa0516950 AT5G04395.1 47.183 142 61 2 20 147 26 167 1.06e-36 135
Msa0516950 AT1G32870.1 50.327 153 72 2 22 172 10 160 2.15e-36 143
Msa0516950 AT1G32870.2 50.327 153 72 2 22 172 10 160 2.24e-36 143
Msa0516950 AT1G32870.3 50.000 154 73 2 22 173 46 197 4.44e-36 142
Msa0516950 AT4G01550.1 44.654 159 73 4 24 175 6 156 5.87e-35 138
Msa0516950 AT5G61430.2 42.197 173 87 4 77 245 6 169 1.33e-34 132
Msa0516950 AT3G12910.1 41.237 194 79 8 25 190 24 210 4.80e-34 132
Msa0516950 AT1G52880.1 44.785 163 76 4 26 176 21 181 9.57e-34 131
Msa0516950 AT3G12977.2 51.376 109 52 1 72 179 13 121 3.13e-32 124
Msa0516950 AT1G02230.1 39.779 181 92 9 23 194 4 176 2.38e-31 125
Msa0516950 AT4G01520.1 39.759 166 83 6 23 180 5 161 8.41e-31 122
Msa0516950 AT4G10350.2 53.125 96 45 0 79 174 20 115 4.73e-30 120
Msa0516950 AT4G01540.4 38.788 165 84 6 24 180 6 161 2.87e-29 120
Msa0516950 AT4G01540.3 38.788 165 84 6 24 180 6 161 3.66e-29 120
Msa0516950 AT5G22380.1 39.241 158 89 5 20 170 3 160 4.09e-29 115
Msa0516950 AT4G01540.2 38.788 165 84 6 24 180 6 161 6.89e-29 119
Msa0516950 AT1G56010.1 48.062 129 60 4 70 193 1 127 7.25e-29 115
Msa0516950 AT4G01540.1 38.788 165 84 6 24 180 6 161 8.19e-29 120
Msa0516950 AT3G44350.2 38.750 160 93 4 22 176 5 164 1.91e-28 114
Msa0516950 AT3G04420.2 37.688 199 104 7 23 209 4 194 7.13e-28 114
Msa0516950 AT3G04420.1 37.688 199 104 7 23 209 4 194 1.08e-27 114
Msa0516950 AT1G02250.1 37.714 175 94 7 23 190 4 170 1.53e-27 114
Msa0516950 AT3G44350.1 41.985 131 72 3 22 148 5 135 3.20e-27 108
Msa0516950 AT2G33480.3 51.042 96 47 0 77 172 8 103 6.10e-27 108
Msa0516950 AT3G10490.4 65.000 80 27 1 96 174 1 80 1.03e-26 112
Msa0516950 AT3G10490.3 65.000 80 27 1 96 174 1 80 1.03e-26 112
Msa0516950 AT1G01010.1 36.810 163 86 4 24 176 5 160 1.30e-24 107
Msa0516950 AT1G02220.1 37.748 151 82 4 23 170 4 145 3.08e-22 99.8
Msa0516950 AT4G28530.2 45.872 109 41 2 22 114 10 116 8.37e-21 94.0
Msa0516950 AT2G18060.2 54.286 70 30 1 103 172 3 70 2.20e-19 89.0
Msa0516950 AT2G43000.2 44.318 88 48 1 86 172 2 89 8.13e-18 82.4
Msa0516950 AT5G22290.2 53.425 73 27 2 103 175 2 67 2.45e-17 82.4
Msa0516950 AT5G64530.2 34.109 129 69 4 21 147 2 116 2.56e-17 80.1
Msa0516950 AT5G64530.1 29.412 187 96 6 21 185 2 174 4.38e-17 80.1
Msa0516950 AT5G14000.2 31.429 140 90 2 10 147 3 138 3.71e-15 73.6
Msa0516950 AT5G14000.1 31.429 140 90 2 10 147 3 138 2.24e-14 72.8
Msa0516950 AT3G04430.1 35.294 136 74 5 28 151 6 139 2.81e-14 72.4
Msa0516950 AT3G56530.1 27.632 152 105 3 21 170 51 199 6.51e-14 73.6
Msa0516950 AT3G55210.1 28.221 163 97 5 22 170 11 167 3.63e-13 70.9
Msa0516950 AT5G50820.1 31.298 131 76 4 22 148 17 137 1.13e-12 67.4
Msa0516950 AT4G28500.1 31.579 152 80 7 15 147 52 198 1.31e-11 66.2
Msa0516950 AT1G25580.1 25.112 223 141 7 6 215 42 251 5.10e-11 65.5
Msa0516950 AT1G28470.1 30.667 150 83 7 15 147 70 215 7.22e-11 64.3

Find 190 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGCTCATAATTGTATTAT+AGG 0.165272 3_4:+68464069 None:intergenic
CTAAATTTCATACTGATAAA+AGG 0.165624 3_4:-68463245 Msa0516950:three_prime_UTR
GGAATAATTCAGAGGATTTA+AGG 0.202063 3_4:+68466958 None:intergenic
GAGAGATTGATGTCTGTAAA+TGG 0.244895 3_4:-68466683 Msa0516950:CDS
CCATCGGATGTTAATAATAC+TGG 0.246728 3_4:-68464133 Msa0516950:CDS
CCAAAGGGAAGAGGACTAAT+TGG 0.267361 3_4:-68465647 Msa0516950:CDS
TATTTCTTCTGGAGAGTAAT+TGG 0.285534 3_4:+68465359 None:intergenic
CTAACAATAGATCATCTTTC+GGG 0.285939 3_4:+68464723 None:intergenic
GGATCAGATTGTATTTCTTC+TGG 0.288766 3_4:+68465348 None:intergenic
CCAATTAGTCCTCTTCCCTT+TGG 0.296425 3_4:+68465647 None:intergenic
CAATTAGTCCTCTTCCCTTT+GGG 0.307407 3_4:+68465648 None:intergenic
ATGGAAATGGTGACGAGGTT+TGG 0.308267 3_4:-68466713 Msa0516950:CDS
AATGTTAAGGACAGTGGTTC+AGG 0.328510 3_4:-68464500 Msa0516950:CDS
CGAGGTTACAGCATTAGATA+TGG 0.348081 3_4:+68465245 None:intergenic
TGGAAATGGTGACGAGGTTT+GGG 0.354029 3_4:-68466712 Msa0516950:CDS
CTTCCCCATGTTAAATGTTA+AGG 0.357270 3_4:-68464513 Msa0516950:CDS
GCAAACTACTTCAGCTCCTT+TGG 0.357575 3_4:-68465385 Msa0516950:CDS
TCTAACAATAGATCATCTTT+CGG 0.362215 3_4:+68464722 None:intergenic
TAGCAGCCTTTACTAACATA+TGG 0.362315 3_4:-68463559 Msa0516950:CDS
CAGATTATTCTCCCCACCTT+TGG 0.375953 3_4:-68464696 Msa0516950:CDS
CATGGATACTGGAAGGCAAC+AGG 0.381571 3_4:-68465747 Msa0516950:CDS
GCAGTTACTTACAGTCATAT+TGG 0.382336 3_4:+68464454 None:intergenic
AAGGATCGTAAAATCAAATC+TGG 0.393585 3_4:-68465723 Msa0516950:CDS
CTGTTCAATCGATGTCCGTT+TGG 0.395786 3_4:+68465780 None:intergenic
AGTCTTACATACTAGCCAAC+TGG 0.398955 3_4:+68463345 None:intergenic
TTTCTTACCACAGCAATAAT+CGG 0.399051 3_4:+68463875 None:intergenic
ATGGTTTCCTCAGAGATATC+AGG 0.402055 3_4:+68465264 None:intergenic
GAGCAACAAATCATGGATAC+TGG 0.402836 3_4:-68465758 Msa0516950:CDS
AGAAAAGAATTTACCTGTCC+CGG 0.402976 3_4:+68465576 None:intergenic
AAATCTGGAACCATCTTGAT+TGG 0.406417 3_4:-68465708 Msa0516950:CDS
ATATTTCCTGCAGGAGGATC+AGG 0.408393 3_4:-68464771 Msa0516950:intron
CAGTTGAGGGGAGGCATGTA+GGG 0.410225 3_4:-68463464 Msa0516950:three_prime_UTR
TCTTTGAATTCGCTTCCGTT+AGG 0.413347 3_4:-68466795 Msa0516950:CDS
TAAATTTCATACTGATAAAA+GGG 0.413508 3_4:-68463244 Msa0516950:three_prime_UTR
ACATTTAACATGGGGAAGTT+CGG 0.413654 3_4:+68464518 None:intergenic
CTTTGAATTCGCTTCCGTTA+GGG 0.416452 3_4:-68466794 Msa0516950:CDS
TTGTTCGTCTCGTGCTGGCC+GGG 0.422165 3_4:+68464024 None:intergenic
TGTGATGTGGATACTGTAAT+AGG 0.423403 3_4:+68465321 None:intergenic
TGTAGTTTCTGCATCTGTGC+TGG 0.428757 3_4:-68463588 Msa0516950:CDS
GGTCGATGTGGGCTTCAGTA+TGG 0.428907 3_4:-68464626 Msa0516950:CDS
CCCACCCTCAAGGAGCTTGA+TGG 0.429254 3_4:-68465606 Msa0516950:CDS
ATTGTTCGTCTCGTGCTGGC+CGG 0.429734 3_4:+68464023 None:intergenic
AGCAGCCTTTACTAACATAT+GGG 0.436241 3_4:-68463558 Msa0516950:CDS
TTCTCTTGATTGTGTTCCAT+CGG 0.437033 3_4:-68466841 Msa0516950:CDS
AACGACGGTGTTGTCGCAAA+AGG 0.438910 3_4:+68464235 None:intergenic
AATAATCGACAGAGGACATA+TGG 0.439649 3_4:+68465456 None:intergenic
TGTCTCATGTGGGATGGTTA+AGG 0.445720 3_4:-68463939 Msa0516950:CDS
CGTTCGAAGATCAATGGAAA+TGG 0.451849 3_4:-68466726 Msa0516950:CDS
TACTTACGTTCGAAGATCAA+TGG 0.455738 3_4:-68466732 Msa0516950:CDS
ATAATTGTATTATAGGTCCT+TGG 0.455759 3_4:+68464076 None:intergenic
GTGGTTCTTCTTCTGTCCTC+AGG 0.458036 3_4:-68465814 Msa0516950:CDS
TTAAATTGTTCGTCTCGTGC+TGG 0.459827 3_4:+68464019 None:intergenic
GTACTGCTCAAAGGAGAATT+CGG 0.460146 3_4:-68463979 Msa0516950:CDS
TGTGTGTGCATATATATTGT+TGG 0.462536 3_4:-68463392 Msa0516950:three_prime_UTR
CATCCGATGGAAAAGCCGTC+TGG 0.463423 3_4:+68464146 None:intergenic
TTGAACAGAGCAACAAATCA+TGG 0.463690 3_4:-68465765 Msa0516950:CDS
CTTCTTCATTCCAATCAAGA+TGG 0.465917 3_4:+68465698 None:intergenic
ACAGTTGAGGGGAGGCATGT+AGG 0.474580 3_4:-68463465 Msa0516950:three_prime_UTR
GGTACCATCAAGCTCCTTGA+GGG 0.487153 3_4:+68465602 None:intergenic
GGAACACGAGTGCGCGATGA+AGG 0.488224 3_4:+68467048 None:intergenic
AGCTGCGGAAAATCATGCTT+CGG 0.489248 3_4:-68463771 Msa0516950:CDS
GTCAATTGCAAATGCAAGCA+AGG 0.491036 3_4:-68463693 Msa0516950:CDS
TGTGTTCCATCGGTCGATGA+TGG 0.492641 3_4:-68466831 Msa0516950:CDS
AGAGATTGATGTCTGTAAAT+GGG 0.493465 3_4:-68466682 Msa0516950:CDS
ACAATTATGAGCAGTGAAAG+TGG 0.495068 3_4:-68464061 Msa0516950:CDS
AGAATGAGTAAAGTAAAAGA+AGG 0.496185 3_4:+68467024 None:intergenic
AGAAGACCACAGAGCACAGT+TGG 0.499893 3_4:+68463616 None:intergenic
CAAAGGGAAGAGGACTAATT+GGG 0.501722 3_4:-68465646 Msa0516950:CDS
TGGTTGCTCATATCCATTGA+CGG 0.503137 3_4:+68464096 None:intergenic
TTCAGGAAGCAACTCGGATG+TGG 0.505403 3_4:-68464483 Msa0516950:CDS
CAGAGGATTTAAGGATGTGA+TGG 0.506276 3_4:+68466967 None:intergenic
GTGACTAACGGACACCTCAC+AGG 0.510714 3_4:+68464544 None:intergenic
AGAAGAAATACAATCTGATC+CGG 0.517670 3_4:-68465346 Msa0516950:CDS
GTGGAATTGTAAGGAGGGCC+CGG 0.518559 3_4:-68464042 Msa0516950:CDS
TGATGGTACCAACCCGGGAC+AGG 0.525518 3_4:-68465589 Msa0516950:intron
CTTTGAGCAGTACCTTGCAT+CGG 0.525564 3_4:+68463989 None:intergenic
TTAACATGGGGAAGTTCGGC+TGG 0.526190 3_4:+68464522 None:intergenic
CATATCTAATGCTGTAACCT+CGG 0.526983 3_4:-68465244 Msa0516950:CDS
GAAGTGTACAATGCCGTCAA+TGG 0.528860 3_4:-68464109 Msa0516950:CDS
TGGGAACCCTGGGACATGCC+TGG 0.531073 3_4:-68466663 Msa0516950:intron
GTGTTCCATCGGTCGATGAT+GGG 0.532265 3_4:-68466830 Msa0516950:CDS
CATACTAGCCAACTGGGTGG+TGG 0.532863 3_4:+68463352 None:intergenic
GAAAAGAATTTACCTGTCCC+GGG 0.534071 3_4:+68465577 None:intergenic
TACAGTGGTCGTGCACCCAA+AGG 0.535914 3_4:-68465663 Msa0516950:CDS
TTCAAAACCGATTATTGCTG+TGG 0.538149 3_4:-68463882 Msa0516950:intron
TCGATAAGTTCCTCGTCAGT+AGG 0.541389 3_4:+68466759 None:intergenic
ATGAGTAAAGTAAAAGAAGG+AGG 0.543309 3_4:+68467027 None:intergenic
TGGTACCATCAAGCTCCTTG+AGG 0.544119 3_4:+68465601 None:intergenic
CACGGAAGAGGATAAGCAGC+TGG 0.545379 3_4:-68465295 Msa0516950:CDS
ATATCCCCATATGTTAGTAA+AGG 0.553903 3_4:+68463553 None:intergenic
ACAGTGGTCGTGCACCCAAA+GGG 0.554173 3_4:-68465662 Msa0516950:CDS
CCAGTATTATTAACATCCGA+TGG 0.557242 3_4:+68464133 None:intergenic
AGACCACAGAGCACAGTTGG+AGG 0.558113 3_4:+68463619 None:intergenic
GTCGTGCACCCAAAGGGAAG+AGG 0.558317 3_4:-68465656 Msa0516950:CDS
TCATACTGATAAAAGGGATG+TGG 0.558693 3_4:-68463238 Msa0516950:three_prime_UTR
CACATCACAGGTCACGGAAG+AGG 0.559271 3_4:-68465307 Msa0516950:CDS
CTGTCCTTAACATTTAACAT+GGG 0.559386 3_4:+68464509 None:intergenic
GTGGATACTGTAATAGGAGC+CGG 0.562139 3_4:+68465327 None:intergenic
GCAGTGAAAGTGGAATTGTA+AGG 0.564087 3_4:-68464051 Msa0516950:CDS
CTCTTCCGTGACCTGTGATG+TGG 0.566229 3_4:+68465308 None:intergenic
TGTGAAGTGTTATGTTACGT+AGG 0.566623 3_4:+68467106 None:intergenic
AAGCATAAAATCAGAATCAA+CGG 0.567827 3_4:+68466937 None:intergenic
AGTGGTACGAAACAAGGATC+CGG 0.568363 3_4:-68465838 Msa0516950:CDS
ACCATCAAGCTCCTTGAGGG+TGG 0.568524 3_4:+68465605 None:intergenic
GTGGCATATGCACCAAAGGT+GGG 0.571599 3_4:+68464684 None:intergenic
TTTGTCAGTGGTACGAAACA+AGG 0.573682 3_4:-68465844 Msa0516950:CDS
ATACTAGCCAACTGGGTGGT+GGG 0.574310 3_4:+68463353 None:intergenic
CGATGCAAGGTACTGCTCAA+AGG 0.575026 3_4:-68463988 Msa0516950:CDS
AAGATTGAACATGTCTCATG+TGG 0.575379 3_4:-68463950 Msa0516950:CDS
TCAATTGCAAATGCAAGCAA+GGG 0.575808 3_4:-68463692 Msa0516950:CDS
ACTGTCCTTAACATTTAACA+TGG 0.576387 3_4:+68464508 None:intergenic
GCTTGATAGTGAAATTCTTG+TGG 0.577677 3_4:+68464665 None:intergenic
AATTGCAAAACTAGCTGCAG+AGG 0.578693 3_4:-68465175 Msa0516950:intron
CAAGCGAACAATGAATCAGA+TGG 0.579515 3_4:-68464647 Msa0516950:CDS
CAGGATCGCAAGTATCCAAA+CGG 0.580718 3_4:-68465795 Msa0516950:CDS
ATTTACAGACATCAATCTCT+CGG 0.583234 3_4:+68466685 None:intergenic
GAGCATCATATCCATCGCTA+TGG 0.583583 3_4:+68465214 None:intergenic
TCATGCATGTAAACAGAGGA+AGG 0.584990 3_4:-68463723 Msa0516950:CDS
TCCATCGGTCGATGATGGGA+TGG 0.586571 3_4:-68466826 Msa0516950:CDS
TGAGTATCGTCCCACCCTCA+AGG 0.587441 3_4:-68465616 Msa0516950:CDS
AGAATTTACCTGTCCCGGGT+TGG 0.588022 3_4:+68465581 None:intergenic
ATCATCACCACTGTAATCAA+AGG 0.589896 3_4:+68464204 None:intergenic
TGGTTTCCTCAGAGATATCA+GGG 0.590219 3_4:+68465265 None:intergenic
GTCTTACATACTAGCCAACT+GGG 0.591065 3_4:+68463346 None:intergenic
TAAGTTCCTCGTCAGTAGGT+CGG 0.593408 3_4:+68466763 None:intergenic
GAGCTTGATGGTACCAACCC+GGG 0.595115 3_4:-68465594 Msa0516950:CDS
AGTTTCAAACTGTGGTGAAG+TGG 0.597493 3_4:-68465409 Msa0516950:CDS
ATGTCTGTAAATGGGAACCC+TGG 0.597611 3_4:-68466674 Msa0516950:CDS
GTGAAGTGTTATGTTACGTA+GGG 0.599304 3_4:+68467107 None:intergenic
ATTACAAAACAATTTCCAGA+CGG 0.599672 3_4:-68464161 Msa0516950:CDS
GGAGAGTAATTGGCAGCCAA+AGG 0.600092 3_4:+68465369 None:intergenic
GAGGAAGTCTTTGATCTGAA+AGG 0.601808 3_4:+68463638 None:intergenic
TCGGTTGATTACCATAGCGA+TGG 0.603183 3_4:-68465225 Msa0516950:CDS
GAAGTTCGGCTGGTGACTAA+CGG 0.603490 3_4:+68464532 None:intergenic
TTTGGATACTTGCGATCCTG+AGG 0.603602 3_4:+68465798 None:intergenic
ATGTTAAATGTTAAGGACAG+TGG 0.603691 3_4:-68464506 Msa0516950:CDS
GGGATGTGGATAAAATTGCA+TGG 0.604279 3_4:-68463224 Msa0516950:three_prime_UTR
AATGAATCAGATGGTCGATG+TGG 0.606511 3_4:-68464638 Msa0516950:CDS
TATTACAGTATCCACATCAC+AGG 0.607630 3_4:-68465319 Msa0516950:CDS
ATGAATCAGATGGTCGATGT+GGG 0.608643 3_4:-68464637 Msa0516950:CDS
TGGAGACAAATAACAAACAA+AGG 0.609432 3_4:+68463501 None:intergenic
CCATCAAGCTCCTTGAGGGT+GGG 0.612423 3_4:+68465606 None:intergenic
TGTGGCATATGCACCAAAGG+TGG 0.615705 3_4:+68464683 None:intergenic
TTTAAATTATGATCTTAACT+GGG 0.616370 3_4:-68464576 Msa0516950:CDS
GGTCGGAATCGAAACCCTAA+CGG 0.616800 3_4:+68466780 None:intergenic
TGTATCACCCACCACCCAGT+TGG 0.616981 3_4:-68463360 Msa0516950:three_prime_UTR
AACAAATCATGGATACTGGA+AGG 0.619020 3_4:-68465754 Msa0516950:CDS
TGAAAGTGGAATTGTAAGGA+GGG 0.619029 3_4:-68464047 Msa0516950:CDS
TCTTGTGGCATATGCACCAA+AGG 0.619439 3_4:+68464680 None:intergenic
CAGTGGTTCAGGAAGCAACT+CGG 0.619958 3_4:-68464489 Msa0516950:CDS
ATCTTACGCGGTATATACGA+TGG 0.620363 3_4:-68467149 None:intergenic
CTTCCTCCAACTGTGCTCTG+TGG 0.620880 3_4:-68463622 Msa0516950:CDS
AGCCACACCTTTGATTACAG+TGG 0.625963 3_4:-68464211 Msa0516950:CDS
GCCATCCCATCATCGACCGA+TGG 0.629071 3_4:+68466825 None:intergenic
GCAGCCTTTACTAACATATG+GGG 0.629075 3_4:-68463557 Msa0516950:CDS
CACCACTGTAATCAAAGGTG+TGG 0.629668 3_4:+68464209 None:intergenic
GTGAAAGTGGAATTGTAAGG+AGG 0.630041 3_4:-68464048 Msa0516950:CDS
CTCACGAGGCAATTGACAGA+AGG 0.630848 3_4:-68464261 Msa0516950:CDS
TTTAAGACAAATCCGATGCA+AGG 0.634026 3_4:-68464001 Msa0516950:CDS
AAAATACCAGGCATGTCCCA+GGG 0.634126 3_4:+68466657 None:intergenic
GTTTGTTGTAGATTTGTCAG+TGG 0.637707 3_4:-68465856 Msa0516950:intron
ATGGATACTGGAAGGCAACA+GGG 0.638784 3_4:-68465746 Msa0516950:CDS
CTTCTGTCAATTGCCTCGTG+AGG 0.643214 3_4:+68464262 None:intergenic
GGAGCTTGATGGTACCAACC+CGG 0.644442 3_4:-68465595 Msa0516950:CDS
AGTATCCACATCACAGGTCA+CGG 0.646407 3_4:-68465313 Msa0516950:CDS
TGACTAACGGACACCTCACA+GGG 0.648297 3_4:+68464545 None:intergenic
TGTCCTTAACATTTAACATG+GGG 0.648596 3_4:+68464510 None:intergenic
TGTCTGTAAATGGGAACCCT+GGG 0.651893 3_4:-68466673 Msa0516950:CDS
ATACTGGAAGGCAACAGGGA+AGG 0.655689 3_4:-68465742 Msa0516950:CDS
GAATCAACGGAATAATTCAG+AGG 0.658682 3_4:+68466950 None:intergenic
TGGCATATGCACCAAAGGTG+GGG 0.660078 3_4:+68464685 None:intergenic
TTTGCAGGAGAAGAAAGCTG+CGG 0.665650 3_4:-68463786 Msa0516950:intron
CAATTGCAAATGCAAGCAAG+GGG 0.668319 3_4:-68463691 Msa0516950:CDS
TCAATGGATATGAGCAACCA+AGG 0.669058 3_4:-68464093 Msa0516950:CDS
ATCGGTCGATGATGGGATGG+CGG 0.670540 3_4:-68466823 Msa0516950:CDS
CTAATCATGCATGTAAACAG+AGG 0.675091 3_4:-68463727 Msa0516950:CDS
TGAACATGTCTCATGTGGGA+TGG 0.675641 3_4:-68463945 Msa0516950:CDS
GCAAGCTGCTTATCCTCACG+AGG 0.677048 3_4:-68464275 Msa0516950:CDS
AGCATTGAAGTTTCAAACTG+TGG 0.683843 3_4:-68465417 Msa0516950:CDS
TCAAAGGTGTGGCTAAACGA+CGG 0.685567 3_4:+68464220 None:intergenic
GGACAGAAGAAGAACCACTC+CGG 0.686334 3_4:+68465819 None:intergenic
CTGGGATCAAATTCCCTGTG+AGG 0.690111 3_4:-68464558 Msa0516950:CDS
TCGATTCCGACCTACTGACG+AGG 0.696170 3_4:-68466769 Msa0516950:CDS
TGTTATCCCTGATATCTCTG+AGG 0.698772 3_4:-68465271 Msa0516950:CDS
ATCGCTATGGTAATCAACCG+AGG 0.702461 3_4:+68465227 None:intergenic
AGATTGAACATGTCTCATGT+GGG 0.719131 3_4:-68463949 Msa0516950:CDS
GATCAATGGAAATGGTGACG+AGG 0.722632 3_4:-68466718 Msa0516950:CDS
TACGAAACAAGGATCCGGAG+TGG 0.730421 3_4:-68465833 Msa0516950:CDS
ATATACGATGGATTTAAACG+CGG 0.756724 3_4:-68467137 Msa0516950:five_prime_UTR
TTACATACTAGCCAACTGGG+TGG 0.784786 3_4:+68463349 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTAAAAAAAATCTGAA+TGG + chr3_4:68463462-68463481 None:intergenic 10.0%
!!! TAATTTTGATTTTTACGTTA+TGG - chr3_4:68463484-68463503 Msa0516950:three_prime_UTR 15.0%
!!! AATTTTGATTTTTACGTTAT+GGG - chr3_4:68463485-68463504 Msa0516950:three_prime_UTR 15.0%
!!! GATTGTTTAAAAAAAGTTTT+TGG - chr3_4:68463887-68463906 Msa0516950:CDS 15.0%
!!! TTTTAAATTATGATCTTAAC+TGG - chr3_4:68465772-68465791 Msa0516950:CDS 15.0%
!! TTTAAATTATGATCTTAACT+GGG - chr3_4:68465773-68465792 Msa0516950:CDS 15.0%
!!! TTAAGAAATTTTTTATTGCT+AGG - chr3_4:68466681-68466700 Msa0516950:CDS 15.0%
!! TAAATTTCATACTGATAAAA+GGG - chr3_4:68467105-68467124 Msa0516950:five_prime_UTR 15.0%
!! TATATAAATAGCTTATACAC+AGG - chr3_4:68464048-68464067 Msa0516950:CDS 20.0%
!!! TGATGTTTTGAGTAATAAAT+AGG - chr3_4:68464426-68464445 Msa0516950:intron 20.0%
!!! CTATAATTACTAGTTTTTAG+AGG - chr3_4:68465218-68465237 Msa0516950:CDS 20.0%
!!! CATTCAGATATATTTCTTTT+AGG - chr3_4:68465297-68465316 Msa0516950:CDS 20.0%
!!! TACATATTTTAAATTCAGTG+TGG - chr3_4:68465329-68465348 Msa0516950:CDS 20.0%
!!! GGTTTTTTATGCTAATAAAA+TGG + chr3_4:68465375-68465394 None:intergenic 20.0%
!!! CTTTTTTAGCTAATAAAACT+AGG + chr3_4:68465396-68465415 None:intergenic 20.0%
!!! TGATTTGATTTTAATTGCAT+TGG - chr3_4:68465529-68465548 Msa0516950:intron 20.0%
!!! ATATTCTCATTTTATGATGT+AGG - chr3_4:68466047-68466066 Msa0516950:intron 20.0%
!!! TATTCTCATTTTATGATGTA+GGG - chr3_4:68466048-68466067 Msa0516950:intron 20.0%
!!! TTAAATTTTGAAATGCTAGT+AGG - chr3_4:68466820-68466839 Msa0516950:CDS 20.0%
!! CTAAATTTCATACTGATAAA+AGG - chr3_4:68467104-68467123 Msa0516950:five_prime_UTR 20.0%
! AGAATGAGTAAAGTAAAAGA+AGG + chr3_4:68463328-68463347 None:intergenic 25.0%
! AAGCATAAAATCAGAATCAA+CGG + chr3_4:68463415-68463434 None:intergenic 25.0%
! GAAAAGAAAAGAAAAATACC+AGG + chr3_4:68463707-68463726 None:intergenic 25.0%
! CTCATAATTTCATCTTGATT+TGG - chr3_4:68463745-68463764 Msa0516950:CDS 25.0%
! AATTAAACTGTCTTCGTATA+TGG - chr3_4:68464155-68464174 Msa0516950:CDS 25.0%
!!! TAATTTTCACAAGCTTTTTC+CGG + chr3_4:68464224-68464243 None:intergenic 25.0%
! CTTATCATATAAGTGGTTAT+AGG + chr3_4:68464327-68464346 None:intergenic 25.0%
! TTAAGCTATTTATCCAAACA+AGG - chr3_4:68464367-68464386 Msa0516950:intron 25.0%
! AAAACAGAAAAAACAGATCA+AGG + chr3_4:68464393-68464412 None:intergenic 25.0%
!!! GATCTGTTTTTTCTGTTTTA+AGG - chr3_4:68464394-68464413 Msa0516950:intron 25.0%
! TCTTAGCTAGATGTAAAAAT+AGG + chr3_4:68464804-68464823 None:intergenic 25.0%
! TCTAGCTAAGAAATTACTAT+AGG - chr3_4:68464813-68464832 Msa0516950:intron 25.0%
!! TTTTCTTAAATAATCGACAG+AGG + chr3_4:68464904-68464923 None:intergenic 25.0%
!!! CTAGTTTTGCAATTTGATTT+TGG + chr3_4:68465168-68465187 None:intergenic 25.0%
!!! AATTACTAGTTTTTAGAGGT+TGG - chr3_4:68465222-68465241 Msa0516950:CDS 25.0%
! AGAGAAACTAATTATGAGAA+TGG - chr3_4:68465414-68465433 Msa0516950:CDS 25.0%
! TGCAATTAAAATCAAATCAG+AGG + chr3_4:68465528-68465547 None:intergenic 25.0%
! TCTAACAATAGATCATCTTT+CGG + chr3_4:68465630-68465649 None:intergenic 25.0%
! ATTACAAAACAATTTCCAGA+CGG - chr3_4:68466188-68466207 Msa0516950:intron 25.0%
! ATAATTGTATTATAGGTCCT+TGG + chr3_4:68466276-68466295 None:intergenic 25.0%
! ACTGCTCATAATTGTATTAT+AGG + chr3_4:68466283-68466302 None:intergenic 25.0%
!!! ATTTGTCTCCATTTCTTTTT+TGG - chr3_4:68466860-68466879 Msa0516950:exon 25.0%
!!! TTTGTCTCCATTTCTTTTTT+GGG - chr3_4:68466861-68466880 Msa0516950:exon 25.0%
! ATATACGATGGATTTAAACG+CGG - chr3_4:68463212-68463231 Msa0516950:three_prime_UTR 30.0%
ATGAGTAAAGTAAAAGAAGG+AGG + chr3_4:68463325-68463344 None:intergenic 30.0%
GGAATAATTCAGAGGATTTA+AGG + chr3_4:68463394-68463413 None:intergenic 30.0%
ATTTACAGACATCAATCTCT+CGG + chr3_4:68463667-68463686 None:intergenic 30.0%
AGAGATTGATGTCTGTAAAT+GGG - chr3_4:68463667-68463686 Msa0516950:CDS 30.0%
AATATTTGCATAGATCGCAT+CGG - chr3_4:68463808-68463827 Msa0516950:intron 30.0%
TTACGGAAATAAGCTGAAAA+CGG + chr3_4:68463938-68463957 None:intergenic 30.0%
CAGAACTTATGAAAATAAGC+CGG - chr3_4:68464202-68464221 Msa0516950:CDS 30.0%
TCAAGTGCTTATCATATAAG+TGG + chr3_4:68464334-68464353 None:intergenic 30.0%
!!! TTTGCTGATTTTTCATCTGT+TGG - chr3_4:68464470-68464489 Msa0516950:CDS 30.0%
!!! TTGCTGATTTTTCATCTGTT+GGG - chr3_4:68464471-68464490 Msa0516950:CDS 30.0%
AAGGATCGTAAAATCAAATC+TGG - chr3_4:68464626-68464645 Msa0516950:CDS 30.0%
!!! AAGACTTTAGTTTTCTACAG+TGG - chr3_4:68464671-68464690 Msa0516950:CDS 30.0%
! TATTTCTTCTGGAGAGTAAT+TGG + chr3_4:68464993-68465012 None:intergenic 30.0%
AGAAGAAATACAATCTGATC+CGG - chr3_4:68465003-68465022 Msa0516950:intron 30.0%
! CAACTCTCAAAATTTTCAGA+GGG + chr3_4:68465476-68465495 None:intergenic 30.0%
! TCAACTCTCAAAATTTTCAG+AGG + chr3_4:68465477-68465496 None:intergenic 30.0%
TTATACTTGATATTTCCTGC+AGG - chr3_4:68465569-68465588 Msa0516950:intron 30.0%
CTAACAATAGATCATCTTTC+GGG + chr3_4:68465629-68465648 None:intergenic 30.0%
TGTCCTTAACATTTAACATG+GGG + chr3_4:68465842-68465861 None:intergenic 30.0%
CTGTCCTTAACATTTAACAT+GGG + chr3_4:68465843-68465862 None:intergenic 30.0%
ACTGTCCTTAACATTTAACA+TGG + chr3_4:68465844-68465863 None:intergenic 30.0%
ATGTTAAATGTTAAGGACAG+TGG - chr3_4:68465843-68465862 Msa0516950:CDS 30.0%
CTCTAACGACATTTATTGTT+CGG - chr3_4:68465917-68465936 Msa0516950:intron 30.0%
ATTTATTGTTCGGTCAATCT+TGG - chr3_4:68465927-68465946 Msa0516950:intron 30.0%
CACTTAAGTTTAGGAAACTA+CGG + chr3_4:68465978-68465997 None:intergenic 30.0%
CAGCTCAAACAATTAAATGT+GGG - chr3_4:68465999-68466018 Msa0516950:intron 30.0%
TTTCTTACCACAGCAATAAT+CGG + chr3_4:68466477-68466496 None:intergenic 30.0%
ATATCCCCATATGTTAGTAA+AGG + chr3_4:68466799-68466818 None:intergenic 30.0%
TGGAGACAAATAACAAACAA+AGG + chr3_4:68466851-68466870 None:intergenic 30.0%
TGTGTGTGCATATATATTGT+TGG - chr3_4:68466957-68466976 Msa0516950:five_prime_UTR 30.0%
! GTGAAGTGTTATGTTACGTA+GGG + chr3_4:68463245-68463264 None:intergenic 35.0%
! TGTGAAGTGTTATGTTACGT+AGG + chr3_4:68463246-68463265 None:intergenic 35.0%
GAATCAACGGAATAATTCAG+AGG + chr3_4:68463402-68463421 None:intergenic 35.0%
TTCTCTTGATTGTGTTCCAT+CGG - chr3_4:68463508-68463527 Msa0516950:three_prime_UTR 35.0%
TACTTACGTTCGAAGATCAA+TGG - chr3_4:68463617-68463636 Msa0516950:CDS 35.0%
GAGAGATTGATGTCTGTAAA+TGG - chr3_4:68463666-68463685 Msa0516950:CDS 35.0%
! CTTATTTCCGTAAGCTTTTC+TGG - chr3_4:68463945-68463964 Msa0516950:CDS 35.0%
!! AGCTGTTTTCATAAGTTCTC+CGG - chr3_4:68464249-68464268 Msa0516950:CDS 35.0%
!! TAAGTTTTGTGAGACTGTTC+CGG + chr3_4:68464271-68464290 None:intergenic 35.0%
TCAAATAAGCCAACCCAAAT+AGG - chr3_4:68464301-68464320 Msa0516950:intron 35.0%
AAGTGGTTATAGGCCTATTT+GGG + chr3_4:68464317-68464336 None:intergenic 35.0%
TAAGTGGTTATAGGCCTATT+TGG + chr3_4:68464318-68464337 None:intergenic 35.0%
!! GTTTGTTGTAGATTTGTCAG+TGG - chr3_4:68464493-68464512 Msa0516950:CDS 35.0%
TTGAACAGAGCAACAAATCA+TGG - chr3_4:68464584-68464603 Msa0516950:CDS 35.0%
AACAAATCATGGATACTGGA+AGG - chr3_4:68464595-68464614 Msa0516950:CDS 35.0%
! AAATCTGGAACCATCTTGAT+TGG - chr3_4:68464641-68464660 Msa0516950:CDS 35.0%
CTTCTTCATTCCAATCAAGA+TGG + chr3_4:68464654-68464673 None:intergenic 35.0%
AGAAAAGAATTTACCTGTCC+CGG + chr3_4:68464776-68464795 None:intergenic 35.0%
GACATATGGATTCTGATACA+AGG + chr3_4:68464882-68464901 None:intergenic 35.0%
AATAATCGACAGAGGACATA+TGG + chr3_4:68464896-68464915 None:intergenic 35.0%
! AGCATTGAAGTTTCAAACTG+TGG - chr3_4:68464932-68464951 Msa0516950:intron 35.0%
GGATCAGATTGTATTTCTTC+TGG + chr3_4:68465004-68465023 None:intergenic 35.0%
TGTGATGTGGATACTGTAAT+AGG + chr3_4:68465031-68465050 None:intergenic 35.0%
TATTACAGTATCCACATCAC+AGG - chr3_4:68465030-68465049 Msa0516950:intron 35.0%
CATATCTAATGCTGTAACCT+CGG - chr3_4:68465105-68465124 Msa0516950:intron 35.0%
!! GCTTGATAGTGAAATTCTTG+TGG + chr3_4:68465687-68465706 None:intergenic 35.0%
ACATTTAACATGGGGAAGTT+CGG + chr3_4:68465834-68465853 None:intergenic 35.0%
CTTCCCCATGTTAAATGTTA+AGG - chr3_4:68465836-68465855 Msa0516950:CDS 35.0%
GCAGTTACTTACAGTCATAT+TGG + chr3_4:68465898-68465917 None:intergenic 35.0%
! ACTACGGTGTGTTATTATCA+TGG + chr3_4:68465962-68465981 None:intergenic 35.0%
CGTAGTTTCCTAAACTTAAG+TGG - chr3_4:68465976-68465995 Msa0516950:intron 35.0%
GCAGCTCAAACAATTAAATG+TGG - chr3_4:68465998-68466017 Msa0516950:intron 35.0%
ATCATCACCACTGTAATCAA+AGG + chr3_4:68466148-68466167 None:intergenic 35.0%
CCAGTATTATTAACATCCGA+TGG + chr3_4:68466219-68466238 None:intergenic 35.0%
CCATCGGATGTTAATAATAC+TGG - chr3_4:68466216-68466235 Msa0516950:intron 35.0%
ACAATTATGAGCAGTGAAAG+TGG - chr3_4:68466288-68466307 Msa0516950:intron 35.0%
TGAAAGTGGAATTGTAAGGA+GGG - chr3_4:68466302-68466321 Msa0516950:intron 35.0%
! TTTAAGACAAATCCGATGCA+AGG - chr3_4:68466348-68466367 Msa0516950:intron 35.0%
AAGATTGAACATGTCTCATG+TGG - chr3_4:68466399-68466418 Msa0516950:intron 35.0%
AGATTGAACATGTCTCATGT+GGG - chr3_4:68466400-68466419 Msa0516950:intron 35.0%
TTCAAAACCGATTATTGCTG+TGG - chr3_4:68466467-68466486 Msa0516950:intron 35.0%
!!! GAGGTTTGTTTCTATTTTGC+AGG - chr3_4:68466548-68466567 Msa0516950:intron 35.0%
CTAATCATGCATGTAAACAG+AGG - chr3_4:68466622-68466641 Msa0516950:intron 35.0%
TCAATTGCAAATGCAAGCAA+GGG - chr3_4:68466657-68466676 Msa0516950:intron 35.0%
TAGCAGCCTTTACTAACATA+TGG - chr3_4:68466790-68466809 Msa0516950:CDS 35.0%
AGCAGCCTTTACTAACATAT+GGG - chr3_4:68466791-68466810 Msa0516950:CDS 35.0%
CAACTGTCCCAAAAAAGAAA+TGG + chr3_4:68466871-68466890 None:intergenic 35.0%
!!! TTTCTTTTTTGGGACAGTTG+AGG - chr3_4:68466871-68466890 Msa0516950:five_prime_UTR 35.0%
!!! TTCTTTTTTGGGACAGTTGA+GGG - chr3_4:68466872-68466891 Msa0516950:five_prime_UTR 35.0%
TCATACTGATAAAAGGGATG+TGG - chr3_4:68467111-68467130 Msa0516950:five_prime_UTR 35.0%
CAGAGGATTTAAGGATGTGA+TGG + chr3_4:68463385-68463404 None:intergenic 40.0%
TCTTTGAATTCGCTTCCGTT+AGG - chr3_4:68463554-68463573 Msa0516950:CDS 40.0%
CTTTGAATTCGCTTCCGTTA+GGG - chr3_4:68463555-68463574 Msa0516950:CDS 40.0%
CGTTCGAAGATCAATGGAAA+TGG - chr3_4:68463623-68463642 Msa0516950:CDS 40.0%
ATGCTCTCCAGAAAAGCTTA+CGG + chr3_4:68463955-68463974 None:intergenic 40.0%
!! AAACAGATCAAGGCCTTGTT+TGG + chr3_4:68464383-68464402 None:intergenic 40.0%
TTTGTCAGTGGTACGAAACA+AGG - chr3_4:68464505-68464524 Msa0516950:CDS 40.0%
GAGCAACAAATCATGGATAC+TGG - chr3_4:68464591-68464610 Msa0516950:CDS 40.0%
CAATTAGTCCTCTTCCCTTT+GGG + chr3_4:68464704-68464723 None:intergenic 40.0%
CAAAGGGAAGAGGACTAATT+GGG - chr3_4:68464703-68464722 Msa0516950:CDS 40.0%
GAAAAGAATTTACCTGTCCC+GGG + chr3_4:68464775-68464794 None:intergenic 40.0%
AGTTTCAAACTGTGGTGAAG+TGG - chr3_4:68464940-68464959 Msa0516950:intron 40.0%
TGTTATCCCTGATATCTCTG+AGG - chr3_4:68465078-68465097 Msa0516950:intron 40.0%
TGGTTTCCTCAGAGATATCA+GGG + chr3_4:68465087-68465106 None:intergenic 40.0%
ATGGTTTCCTCAGAGATATC+AGG + chr3_4:68465088-68465107 None:intergenic 40.0%
CGAGGTTACAGCATTAGATA+TGG + chr3_4:68465107-68465126 None:intergenic 40.0%
AATTGCAAAACTAGCTGCAG+AGG - chr3_4:68465174-68465193 Msa0516950:intron 40.0%
! CTCTCAAAATTTTCAGAGGG+AGG + chr3_4:68465473-68465492 None:intergenic 40.0%
TACTTGATATTTCCTGCAGG+AGG - chr3_4:68465572-68465591 Msa0516950:intron 40.0%
CAAGCGAACAATGAATCAGA+TGG - chr3_4:68465702-68465721 Msa0516950:CDS 40.0%
AATGAATCAGATGGTCGATG+TGG - chr3_4:68465711-68465730 Msa0516950:CDS 40.0%
ATGAATCAGATGGTCGATGT+GGG - chr3_4:68465712-68465731 Msa0516950:CDS 40.0%
AATGTTAAGGACAGTGGTTC+AGG - chr3_4:68465849-68465868 Msa0516950:intron 40.0%
! TTGAGCTGCCACTTAAGTTT+AGG + chr3_4:68465987-68466006 None:intergenic 40.0%
AATTAAATGTGGGCTTGTCG+TGG - chr3_4:68466009-68466028 Msa0516950:intron 40.0%
TGGTTGCTCATATCCATTGA+CGG + chr3_4:68466256-68466275 None:intergenic 40.0%
TCAATGGATATGAGCAACCA+AGG - chr3_4:68466256-68466275 Msa0516950:intron 40.0%
GCAGTGAAAGTGGAATTGTA+AGG - chr3_4:68466298-68466317 Msa0516950:intron 40.0%
GTGAAAGTGGAATTGTAAGG+AGG - chr3_4:68466301-68466320 Msa0516950:intron 40.0%
TTAAATTGTTCGTCTCGTGC+TGG + chr3_4:68466333-68466352 None:intergenic 40.0%
GTACTGCTCAAAGGAGAATT+CGG - chr3_4:68466370-68466389 Msa0516950:intron 40.0%
! GTTTGCGTATTTTGCTTGCT+TGG - chr3_4:68466498-68466517 Msa0516950:intron 40.0%
! TTTTCTCTGCATGTGTTGTG+AGG - chr3_4:68466529-68466548 Msa0516950:intron 40.0%
TCATGCATGTAAACAGAGGA+AGG - chr3_4:68466626-68466645 Msa0516950:intron 40.0%
GTCAATTGCAAATGCAAGCA+AGG - chr3_4:68466656-68466675 Msa0516950:intron 40.0%
CAATTGCAAATGCAAGCAAG+GGG - chr3_4:68466658-68466677 Msa0516950:intron 40.0%
GAGGAAGTCTTTGATCTGAA+AGG + chr3_4:68466714-68466733 None:intergenic 40.0%
GCAGCCTTTACTAACATATG+GGG - chr3_4:68466792-68466811 Msa0516950:CDS 40.0%
!!! TCTTTTTTGGGACAGTTGAG+GGG - chr3_4:68466873-68466892 Msa0516950:five_prime_UTR 40.0%
GTCTTACATACTAGCCAACT+GGG + chr3_4:68467006-68467025 None:intergenic 40.0%
AGTCTTACATACTAGCCAAC+TGG + chr3_4:68467007-68467026 None:intergenic 40.0%
GGGATGTGGATAAAATTGCA+TGG - chr3_4:68467125-68467144 Msa0516950:five_prime_UTR 40.0%
TAAGTTCCTCGTCAGTAGGT+CGG + chr3_4:68463589-68463608 None:intergenic 45.0%
TCGATAAGTTCCTCGTCAGT+AGG + chr3_4:68463593-68463612 None:intergenic 45.0%
! GATCAATGGAAATGGTGACG+AGG - chr3_4:68463631-68463650 Msa0516950:CDS 45.0%
! ATGGAAATGGTGACGAGGTT+TGG - chr3_4:68463636-68463655 Msa0516950:CDS 45.0%
! TGGAAATGGTGACGAGGTTT+GGG - chr3_4:68463637-68463656 Msa0516950:CDS 45.0%
ATGTCTGTAAATGGGAACCC+TGG - chr3_4:68463675-68463694 Msa0516950:CDS 45.0%
TGTCTGTAAATGGGAACCCT+GGG - chr3_4:68463676-68463695 Msa0516950:CDS 45.0%
AAAATACCAGGCATGTCCCA+GGG + chr3_4:68463695-68463714 None:intergenic 45.0%
AAAAATACCAGGCATGTCCC+AGG + chr3_4:68463696-68463715 None:intergenic 45.0%
GCTTATACACAGGCTCTGTT+TGG - chr3_4:68464058-68464077 Msa0516950:CDS 45.0%
GGTTATAGGCCTATTTGGGT+TGG + chr3_4:68464313-68464332 None:intergenic 45.0%
AGTGGTACGAAACAAGGATC+CGG - chr3_4:68464511-68464530 Msa0516950:CDS 45.0%
TTTGGATACTTGCGATCCTG+AGG + chr3_4:68464554-68464573 None:intergenic 45.0%
CAGGATCGCAAGTATCCAAA+CGG - chr3_4:68464554-68464573 Msa0516950:CDS 45.0%
CTGTTCAATCGATGTCCGTT+TGG + chr3_4:68464572-68464591 None:intergenic 45.0%
ATGGATACTGGAAGGCAACA+GGG - chr3_4:68464603-68464622 Msa0516950:CDS 45.0%
CCAATTAGTCCTCTTCCCTT+TGG + chr3_4:68464705-68464724 None:intergenic 45.0%
CCAAAGGGAAGAGGACTAAT+TGG - chr3_4:68464702-68464721 Msa0516950:CDS 45.0%
GCAAACTACTTCAGCTCCTT+TGG - chr3_4:68464964-68464983 Msa0516950:intron 45.0%
GTGGATACTGTAATAGGAGC+CGG + chr3_4:68465025-68465044 None:intergenic 45.0%
AGTATCCACATCACAGGTCA+CGG - chr3_4:68465036-68465055 Msa0516950:intron 45.0%
ATCGCTATGGTAATCAACCG+AGG + chr3_4:68465125-68465144 None:intergenic 45.0%
TCGGTTGATTACCATAGCGA+TGG - chr3_4:68465124-68465143 Msa0516950:intron 45.0%
GAGCATCATATCCATCGCTA+TGG + chr3_4:68465138-68465157 None:intergenic 45.0%
ATATTTCCTGCAGGAGGATC+AGG - chr3_4:68465578-68465597 Msa0516950:intron 45.0%
CAGATTATTCTCCCCACCTT+TGG - chr3_4:68465653-68465672 Msa0516950:CDS 45.0%
TCTTGTGGCATATGCACCAA+AGG + chr3_4:68465672-68465691 None:intergenic 45.0%
ATTGTTCGGTCAATCTTGGC+AGG - chr3_4:68465931-68465950 Msa0516950:intron 45.0%
! TCAAAGGTGTGGCTAAACGA+CGG + chr3_4:68466132-68466151 None:intergenic 45.0%
AGCCACACCTTTGATTACAG+TGG - chr3_4:68466138-68466157 Msa0516950:intron 45.0%
CACCACTGTAATCAAAGGTG+TGG + chr3_4:68466143-68466162 None:intergenic 45.0%
! TTTCCAGACGGCTTTTCCAT+CGG - chr3_4:68466200-68466219 Msa0516950:intron 45.0%
GAAGTGTACAATGCCGTCAA+TGG - chr3_4:68466240-68466259 Msa0516950:intron 45.0%
CTTTGAGCAGTACCTTGCAT+CGG + chr3_4:68466363-68466382 None:intergenic 45.0%
TGAACATGTCTCATGTGGGA+TGG - chr3_4:68466404-68466423 Msa0516950:intron 45.0%
TGTCTCATGTGGGATGGTTA+AGG - chr3_4:68466410-68466429 Msa0516950:intron 45.0%
! ATTTTGCTTGCTTGGCCTAG+AGG - chr3_4:68466506-68466525 Msa0516950:intron 45.0%
CACATGCAGAGAAAACCTCT+AGG + chr3_4:68466524-68466543 None:intergenic 45.0%
TTTGCAGGAGAAGAAAGCTG+CGG - chr3_4:68466563-68466582 Msa0516950:intron 45.0%
AGCTGCGGAAAATCATGCTT+CGG - chr3_4:68466578-68466597 Msa0516950:intron 45.0%
TGTAGTTTCTGCATCTGTGC+TGG - chr3_4:68466761-68466780 Msa0516950:CDS 45.0%
TTACATACTAGCCAACTGGG+TGG + chr3_4:68467003-68467022 None:intergenic 45.0%
TGTGTTCCATCGGTCGATGA+TGG - chr3_4:68463518-68463537 Msa0516950:three_prime_UTR 50.0%
GTGTTCCATCGGTCGATGAT+GGG - chr3_4:68463519-68463538 Msa0516950:three_prime_UTR 50.0%
GGTCGGAATCGAAACCCTAA+CGG + chr3_4:68463572-68463591 None:intergenic 50.0%
! TCGCATCGGTAGTGTCTGTT+TGG - chr3_4:68463822-68463841 Msa0516950:intron 50.0%
TACGAAACAAGGATCCGGAG+TGG - chr3_4:68464516-68464535 Msa0516950:CDS 50.0%
GGACAGAAGAAGAACCACTC+CGG + chr3_4:68464533-68464552 None:intergenic 50.0%
GTGGTTCTTCTTCTGTCCTC+AGG - chr3_4:68464535-68464554 Msa0516950:CDS 50.0%
CATGGATACTGGAAGGCAAC+AGG - chr3_4:68464602-68464621 Msa0516950:CDS 50.0%
ATACTGGAAGGCAACAGGGA+AGG - chr3_4:68464607-68464626 Msa0516950:CDS 50.0%
GGTACCATCAAGCTCCTTGA+GGG + chr3_4:68464750-68464769 None:intergenic 50.0%
TGGTACCATCAAGCTCCTTG+AGG + chr3_4:68464751-68464770 None:intergenic 50.0%
AGAATTTACCTGTCCCGGGT+TGG + chr3_4:68464771-68464790 None:intergenic 50.0%
GGAGAGTAATTGGCAGCCAA+AGG + chr3_4:68464983-68465002 None:intergenic 50.0%
TGGCATATGCACCAAAGGTG+GGG + chr3_4:68465667-68465686 None:intergenic 50.0%
GTGGCATATGCACCAAAGGT+GGG + chr3_4:68465668-68465687 None:intergenic 50.0%
TGTGGCATATGCACCAAAGG+TGG + chr3_4:68465669-68465688 None:intergenic 50.0%
CTGGGATCAAATTCCCTGTG+AGG - chr3_4:68465791-68465810 Msa0516950:CDS 50.0%
! TGACTAACGGACACCTCACA+GGG + chr3_4:68465807-68465826 None:intergenic 50.0%
GAAGTTCGGCTGGTGACTAA+CGG + chr3_4:68465820-68465839 None:intergenic 50.0%
TTAACATGGGGAAGTTCGGC+TGG + chr3_4:68465830-68465849 None:intergenic 50.0%
CAGTGGTTCAGGAAGCAACT+CGG - chr3_4:68465860-68465879 Msa0516950:intron 50.0%
TTCAGGAAGCAACTCGGATG+TGG - chr3_4:68465866-68465885 Msa0516950:intron 50.0%
CTTCTGTCAATTGCCTCGTG+AGG + chr3_4:68466090-68466109 None:intergenic 50.0%
CTCACGAGGCAATTGACAGA+AGG - chr3_4:68466088-68466107 Msa0516950:intron 50.0%
!! AACGACGGTGTTGTCGCAAA+AGG + chr3_4:68466117-68466136 None:intergenic 50.0%
!! CGATGCAAGGTACTGCTCAA+AGG - chr3_4:68466361-68466380 Msa0516950:intron 50.0%
AGAAGACCACAGAGCACAGT+TGG + chr3_4:68466736-68466755 None:intergenic 50.0%
!!! TTTTTGGGACAGTTGAGGGG+AGG - chr3_4:68466876-68466895 Msa0516950:five_prime_UTR 50.0%
ATACTAGCCAACTGGGTGGT+GGG + chr3_4:68466999-68467018 None:intergenic 50.0%
!! TCCATCGGTCGATGATGGGA+TGG - chr3_4:68463523-68463542 Msa0516950:exon 55.0%
!! ATCGGTCGATGATGGGATGG+CGG - chr3_4:68463526-68463545 Msa0516950:exon 55.0%
TCGATTCCGACCTACTGACG+AGG - chr3_4:68463580-68463599 Msa0516950:CDS 55.0%
TACAGTGGTCGTGCACCCAA+AGG - chr3_4:68464686-68464705 Msa0516950:CDS 55.0%
ACAGTGGTCGTGCACCCAAA+GGG - chr3_4:68464687-68464706 Msa0516950:CDS 55.0%
! TGAGTATCGTCCCACCCTCA+AGG - chr3_4:68464733-68464752 Msa0516950:CDS 55.0%
CCATCAAGCTCCTTGAGGGT+GGG + chr3_4:68464746-68464765 None:intergenic 55.0%
ACCATCAAGCTCCTTGAGGG+TGG + chr3_4:68464747-68464766 None:intergenic 55.0%
! GGAGCTTGATGGTACCAACC+CGG - chr3_4:68464754-68464773 Msa0516950:CDS 55.0%
! GAGCTTGATGGTACCAACCC+GGG - chr3_4:68464755-68464774 Msa0516950:CDS 55.0%
CTCTTCCGTGACCTGTGATG+TGG + chr3_4:68465044-68465063 None:intergenic 55.0%
CACATCACAGGTCACGGAAG+AGG - chr3_4:68465042-68465061 Msa0516950:intron 55.0%
CACGGAAGAGGATAAGCAGC+TGG - chr3_4:68465054-68465073 Msa0516950:intron 55.0%
GGTCGATGTGGGCTTCAGTA+TGG - chr3_4:68465723-68465742 Msa0516950:CDS 55.0%
! GTGACTAACGGACACCTCAC+AGG + chr3_4:68465808-68465827 None:intergenic 55.0%
GCAAGCTGCTTATCCTCACG+AGG - chr3_4:68466074-68466093 Msa0516950:intron 55.0%
CATCCGATGGAAAAGCCGTC+TGG + chr3_4:68466206-68466225 None:intergenic 55.0%
GTGGAATTGTAAGGAGGGCC+CGG - chr3_4:68466307-68466326 Msa0516950:intron 55.0%
! ATTGTTCGTCTCGTGCTGGC+CGG + chr3_4:68466329-68466348 None:intergenic 55.0%
CTTCCTCCAACTGTGCTCTG+TGG - chr3_4:68466727-68466746 Msa0516950:CDS 55.0%
AGACCACAGAGCACAGTTGG+AGG + chr3_4:68466733-68466752 None:intergenic 55.0%
! ACAGTTGAGGGGAGGCATGT+AGG - chr3_4:68466884-68466903 Msa0516950:five_prime_UTR 55.0%
! CAGTTGAGGGGAGGCATGTA+GGG - chr3_4:68466885-68466904 Msa0516950:five_prime_UTR 55.0%
TGTATCACCCACCACCCAGT+TGG - chr3_4:68466989-68467008 Msa0516950:five_prime_UTR 55.0%
CATACTAGCCAACTGGGTGG+TGG + chr3_4:68467000-68467019 None:intergenic 55.0%
GGAACACGAGTGCGCGATGA+AGG + chr3_4:68463304-68463323 None:intergenic 60.0%
GCCATCCCATCATCGACCGA+TGG + chr3_4:68463527-68463546 None:intergenic 60.0%
GTCGTGCACCCAAAGGGAAG+AGG - chr3_4:68464693-68464712 Msa0516950:CDS 60.0%
CCCACCCTCAAGGAGCTTGA+TGG - chr3_4:68464743-68464762 Msa0516950:CDS 60.0%
TGATGGTACCAACCCGGGAC+AGG - chr3_4:68464760-68464779 Msa0516950:CDS 60.0%
TCAACGCCTGATCCTCCTGC+AGG + chr3_4:68465587-68465606 None:intergenic 60.0%
! TTGTTCGTCTCGTGCTGGCC+GGG + chr3_4:68466328-68466347 None:intergenic 60.0%
TGGGAACCCTGGGACATGCC+TGG - chr3_4:68463686-68463705 Msa0516950:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 68463206 68467165 68463206 ID=Msa0516950;Name=Msa0516950
chr3_4 mRNA 68463206 68467165 68463206 ID=Msa0516950-mRNA-1;Parent=Msa0516950;Name=Msa0516950-mRNA-1;_AED=0.28;_eAED=0.28;_QI=297|1|1|1|1|1|6|335|594
chr3_4 exon 68463206 68463801 68463206 ID=Msa0516950-mRNA-1:exon:18038;Parent=Msa0516950-mRNA-1
chr3_4 exon 68463883 68464302 68463883 ID=Msa0516950-mRNA-1:exon:18037;Parent=Msa0516950-mRNA-1
chr3_4 exon 68464466 68464780 68464466 ID=Msa0516950-mRNA-1:exon:18036;Parent=Msa0516950-mRNA-1
chr3_4 exon 68465176 68465481 68465176 ID=Msa0516950-mRNA-1:exon:18035;Parent=Msa0516950-mRNA-1
chr3_4 exon 68465590 68465867 68465590 ID=Msa0516950-mRNA-1:exon:18034;Parent=Msa0516950-mRNA-1
chr3_4 exon 68466664 68467165 68466664 ID=Msa0516950-mRNA-1:exon:18033;Parent=Msa0516950-mRNA-1
chr3_4 five_prime_UTR 68466869 68467165 68466869 ID=Msa0516950-mRNA-1:five_prime_utr;Parent=Msa0516950-mRNA-1
chr3_4 CDS 68466664 68466868 68466664 ID=Msa0516950-mRNA-1:cds;Parent=Msa0516950-mRNA-1
chr3_4 CDS 68465590 68465867 68465590 ID=Msa0516950-mRNA-1:cds;Parent=Msa0516950-mRNA-1
chr3_4 CDS 68465176 68465481 68465176 ID=Msa0516950-mRNA-1:cds;Parent=Msa0516950-mRNA-1
chr3_4 CDS 68464466 68464780 68464466 ID=Msa0516950-mRNA-1:cds;Parent=Msa0516950-mRNA-1
chr3_4 CDS 68463883 68464302 68463883 ID=Msa0516950-mRNA-1:cds;Parent=Msa0516950-mRNA-1
chr3_4 CDS 68463541 68463801 68463541 ID=Msa0516950-mRNA-1:cds;Parent=Msa0516950-mRNA-1
chr3_4 three_prime_UTR 68463206 68463540 68463206 ID=Msa0516950-mRNA-1:three_prime_utr;Parent=Msa0516950-mRNA-1
Gene Sequence

>Msa0516950

ATGGGTTCTCTTGATTGTGTTCCATCGGTCGATGATGGGATGGCGGTGTTGTCTTTGAATTCGCTTCCGTTAGGGTTTCGATTCCGACCTACTGACGAGGAACTTATCGATTACTACTTACGTTCGAAGATCAATGGAAATGGTGACGAGGTTTGGGTTATCCGAGAGATTGATGTCTGTAAATGGGAACCCTGGGACATGCCTGATTTGTCAGTGGTACGAAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCTCAGGATCGCAAGTATCCAAACGGACATCGATTGAACAGAGCAACAAATCATGGATACTGGAAGGCAACAGGGAAGGATCGTAAAATCAAATCTGGAACCATCTTGATTGGAATGAAGAAGACTTTAGTTTTCTACAGTGGTCGTGCACCCAAAGGGAAGAGGACTAATTGGGTTATGCATGAGTATCGTCCCACCCTCAAGGAGCTTGATGGTACCAACCCGGGACAGAATCCATATGTCCTCTGTCGATTATTTAAGAAAAACGATGAGAGCATTGAAGTTTCAAACTGTGGTGAAGTGGAGCAAACTACTTCAGCTCCTTTGGCTGCCAATTACTCTCCAGAAGAAATACAATCTGATCCGGCTCCTATTACAGTATCCACATCACAGGTCACGGAAGAGGATAAGCAGCTGGCTGTTATCCCTGATATCTCTGAGGAAACCATATCTAATGCTGTAACCTCGGTTGATTACCATAGCGATGGATATGATGCTCATGATGTCCAAAATCAAATTGCAAAACTAGCTGCAGAGGAGGATCAGGCGTTGAACTTTGACATGTATTATAACCCGAAAGATGATCTATTGTTAGATGACAGATTATTCTCCCCACCTTTGGTGCATATGCCACAAGAATTTCACTATCAAGCGAACAATGAATCAGATGGTCGATGTGGGCTTCAGTATGGTACAAATGAGATAAATATTTCAGACTTTTTAAATTATGATCTTAACTGGGATCAAATTCCCTGTGAGGTGTCCGTTAGTCACCAGCCGAACTTCCCCATGTTAAATGTTAAGGACAGTGGTTCAGGAAGCAACTCGGATGTGGAAGTAGCCAATATGACTGGTATGCAAGCTGCTTATCCTCACGAGGCAATTGACAGAAGGATTCCTTTTGCGACAACACCGTCGTTTAGCCACACCTTTGATTACAGTGGTGATGATCAAAAGAGCAATGTTGTTTTATTACAAAACAATTTCCAGACGGCTTTTCCATCGGATGTTAATAATACTGGTGAAGTGTACAATGCCGTCAATGGATATGAGCAACCAAGGACCTATAATACAATTATGAGCAGTGAAAGTGGAATTGTAAGGAGGGCCCGGCCAGCACGAGACGAACAATTTAAGACAAATCCGATGCAAGGTACTGCTCAAAGGAGAATTCGGTTGTCAAAGATTGAACATGTCTCATGTGGGATGGTTAAGGTTAAAGATGAGAGTTGTACACAAGAACAACATAATTCAAAACCGATTATTGCTGTGGAGAAGAAAGCTGCGGAAAATCATGCTTCGGATGATGAAAGTGCTATTTGTACTAATCATGCATGTAAACAGAGGAAGGTTCACAAGTCAATTGCAAATGCAAGCAAGGGGTTAAGAAATTTTTTATTGCTAGGAAGAGCACCTTTCAGATCAAAGACTTCCTCCAACTGTGCTCTGTGGTCTTCTGTTTTTGTAGTTTCTGCATCTGTGCTGGTTTCATTAGCAGCCTTTACTAACATATGGGGATATCTTAAATTTTGA
Protein sequence

>Msa0516950

MGSLDCVPSVDDGMAVLSLNSLPLGFRFRPTDEELIDYYLRSKINGNGDEVWVIREIDVCKWEPWDMPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGTILIGMKKTLVFYSGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKNDESIEVSNCGEVEQTTSAPLAANYSPEEIQSDPAPITVSTSQVTEEDKQLAVIPDISEETISNAVTSVDYHSDGYDAHDVQNQIAKLAAEEDQALNFDMYYNPKDDLLLDDRLFSPPLVHMPQEFHYQANNESDGRCGLQYGTNEINISDFLNYDLNWDQIPCEVSVSHQPNFPMLNVKDSGSGSNSDVEVANMTGMQAAYPHEAIDRRIPFATTPSFSHTFDYSGDDQKSNVVLLQNNFQTAFPSDVNNTGEVYNAVNGYEQPRTYNTIMSSESGIVRRARPARDEQFKTNPMQGTAQRRIRLSKIEHVSCGMVKVKDESCTQEQHNSKPIIAVEKKAAENHASDDESAICTNHACKQRKVHKSIANASKGLRNFLLLGRAPFRSKTSSNCALWSSVFVVSASVLVSLAAFTNIWGYLKF*