Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426200 | XP_003602410.1 | 96.429 | 420 | 15 | 0 | 1 | 420 | 1 | 420 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426200 | sp|Q7XUA8|ILL5_ORYSJ | 61.713 | 397 | 150 | 2 | 24 | 419 | 20 | 415 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426200 | Q0GXX5 | 96.429 | 420 | 15 | 0 | 1 | 420 | 1 | 420 | 0.0 | 840 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0425980 | Msa0426200 | 0.989986 | 1.544794e-180 | -8.615850e-47 |
| Msa0426060 | Msa0426200 | 0.976192 | 2.331975e-141 | -8.615850e-47 |
| Msa0426200 | Msa0436900 | 0.807981 | 3.875217e-50 | -8.615850e-47 |
| Msa0426200 | Msa1220710 | 0.801423 | 9.068118e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426200 | MtrunA17_Chr3g0128101 | 96.429 | 420 | 15 | 0 | 1 | 420 | 1 | 420 | 0.0 | 840 |
| Msa0426200 | MtrunA17_Chr3g0124881 | 52.334 | 407 | 188 | 2 | 18 | 418 | 69 | 475 | 2.46e-146 | 424 |
| Msa0426200 | MtrunA17_Chr2g0330721 | 53.093 | 388 | 178 | 4 | 30 | 415 | 49 | 434 | 6.03e-145 | 420 |
| Msa0426200 | MtrunA17_Chr8g0364301 | 49.526 | 422 | 202 | 4 | 7 | 420 | 12 | 430 | 1.37e-143 | 416 |
| Msa0426200 | MtrunA17_Chr8g0371561 | 51.571 | 382 | 183 | 1 | 30 | 411 | 49 | 428 | 1.55e-142 | 413 |
| Msa0426200 | MtrunA17_Chr2g0330661 | 51.554 | 386 | 187 | 0 | 30 | 415 | 44 | 429 | 3.57e-141 | 410 |
| Msa0426200 | MtrunA17_Chr2g0328461 | 50.777 | 386 | 190 | 0 | 30 | 415 | 48 | 433 | 7.02e-141 | 410 |
| Msa0426200 | MtrunA17_Chr8g0341471 | 49.644 | 421 | 205 | 4 | 5 | 418 | 11 | 431 | 1.11e-140 | 409 |
| Msa0426200 | MtrunA17_Chr2g0330671 | 46.411 | 418 | 216 | 2 | 6 | 415 | 16 | 433 | 6.36e-136 | 397 |
| Msa0426200 | MtrunA17_Chr2g0328481 | 41.026 | 312 | 139 | 1 | 151 | 417 | 4 | 315 | 5.54e-74 | 234 |
| Msa0426200 | MtrunA17_Chr8g0364461 | 42.071 | 309 | 147 | 7 | 108 | 413 | 96 | 375 | 3.59e-66 | 217 |
| Msa0426200 | MtrunA17_Chr2g0330711 | 60.526 | 114 | 45 | 0 | 38 | 151 | 48 | 161 | 5.43e-48 | 161 |
| Msa0426200 | MtrunA17_Chr2g0328471 | 53.788 | 132 | 60 | 1 | 38 | 169 | 48 | 178 | 4.01e-46 | 157 |
| Msa0426200 | MtrunA17_Chr3g0128141 | 69.767 | 86 | 17 | 3 | 1 | 81 | 1 | 82 | 2.78e-31 | 115 |
| Msa0426200 | MtrunA17_Chr3g0128121 | 83.673 | 49 | 6 | 1 | 123 | 169 | 1 | 49 | 1.44e-19 | 82.0 |
| Msa0426200 | MtrunA17_Chr3g0128111 | 59.036 | 83 | 27 | 2 | 170 | 250 | 1 | 78 | 2.81e-18 | 84.0 |
| Msa0426200 | MtrunA17_Chr1g0158601 | 57.407 | 54 | 23 | 0 | 201 | 254 | 6 | 59 | 1.43e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426200 | AT5G54140.1 | 58.413 | 416 | 170 | 2 | 4 | 418 | 7 | 420 | 3.79e-174 | 494 |
| Msa0426200 | AT3G02875.1 | 50.251 | 398 | 196 | 1 | 23 | 418 | 33 | 430 | 5.84e-145 | 420 |
| Msa0426200 | AT1G51760.1 | 49.519 | 416 | 206 | 2 | 6 | 417 | 10 | 425 | 1.10e-144 | 419 |
| Msa0426200 | AT1G51780.1 | 49.522 | 418 | 207 | 2 | 6 | 419 | 10 | 427 | 3.18e-142 | 413 |
| Msa0426200 | AT5G56660.1 | 52.368 | 380 | 178 | 2 | 38 | 417 | 49 | 425 | 2.26e-137 | 400 |
| Msa0426200 | AT5G56650.1 | 50.263 | 380 | 186 | 2 | 38 | 417 | 48 | 424 | 8.01e-130 | 381 |
| Msa0426200 | AT1G44350.1 | 51.250 | 400 | 188 | 2 | 20 | 417 | 67 | 461 | 6.76e-127 | 375 |
| Msa0426200 | AT3G02875.2 | 53.405 | 279 | 128 | 1 | 23 | 299 | 33 | 311 | 2.89e-104 | 312 |
| Msa0426200 | AT5G56650.2 | 55.133 | 263 | 116 | 1 | 38 | 300 | 48 | 308 | 1.56e-99 | 299 |
| Msa0426200 | AT3G02875.3 | 54.661 | 236 | 105 | 1 | 23 | 256 | 33 | 268 | 2.27e-88 | 271 |
Find 103 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGAGACAAACAATAATT+TGG | 0.156803 | 3_2:-76584256 | Msa0426200:five_prime_UTR |
| GTAAATCGCAATTTCAAATT+AGG | 0.168397 | 3_2:-76584428 | Msa0426200:five_prime_UTR |
| TGTTCTTGGAAAGCCAATTC+TGG | 0.188078 | 3_2:+76584041 | None:intergenic |
| ATCCCATCATATGTAAAATT+TGG | 0.213215 | 3_2:-76581754 | Msa0426200:CDS |
| TTCGCCTACCATCGCCTTCT+TGG | 0.222489 | 3_2:+76580550 | None:intergenic |
| GGCTACATCATTGGCAATAT+TGG | 0.227340 | 3_2:-76582424 | Msa0426200:CDS |
| GCTCATGCTACTATGCTATT+AGG | 0.227578 | 3_2:-76583499 | Msa0426200:CDS |
| ACTGGTATTGTTGCTCAAAT+TGG | 0.240045 | 3_2:-76583948 | Msa0426200:CDS |
| CCATGACATTTAGACATAAA+AGG | 0.245825 | 3_2:+76584450 | None:intergenic |
| CTCATGCTACTATGCTATTA+GGG | 0.260514 | 3_2:-76583498 | Msa0426200:CDS |
| CATCGCTATTCGTGCTGATA+TGG | 0.271047 | 3_2:-76583907 | Msa0426200:CDS |
| GGGCACTTGTGTTGTGTTCT+TGG | 0.285265 | 3_2:+76584027 | None:intergenic |
| CCATCGCCTTCTTGGCTTCA+TGG | 0.291544 | 3_2:+76580558 | None:intergenic |
| TATGGATGCACTCCCTTTGC+AGG | 0.301563 | 3_2:-76583889 | Msa0426200:intron |
| ATGCATCCAGCAGCTGTAAA+AGG | 0.313338 | 3_2:+76582516 | None:intergenic |
| TTAGCAACTGGATATGTATA+AGG | 0.319340 | 3_2:+76583972 | None:intergenic |
| TGTTAGACCGAAAACATTAC+TGG | 0.321264 | 3_2:-76584350 | Msa0426200:five_prime_UTR |
| CATTACTGGATTTCAAATTC+AGG | 0.322344 | 3_2:-76584336 | Msa0426200:five_prime_UTR |
| ATTGTTGCTCAAATTGGTTC+TGG | 0.333604 | 3_2:-76583942 | Msa0426200:CDS |
| GAAGTTGTGCTTTCCACTTC+AGG | 0.335971 | 3_2:-76584308 | Msa0426200:five_prime_UTR |
| TCATTGACAACAGCAGGATA+TGG | 0.358726 | 3_2:+76580641 | None:intergenic |
| TAAAATTTGGAGGTACTCTA+AGG | 0.372216 | 3_2:-76581741 | Msa0426200:CDS |
| GATGAGGAAGCTCTTTCAAT+TGG | 0.378444 | 3_2:-76580419 | Msa0426200:CDS |
| GAAGAGACAAACAATAATTT+GGG | 0.383469 | 3_2:-76584255 | Msa0426200:five_prime_UTR |
| GATTCATCAACACCCAGAAT+TGG | 0.394773 | 3_2:-76584054 | Msa0426200:CDS |
| GGAGCTATAGCATCGATTCC+AGG | 0.399066 | 3_2:-76582540 | Msa0426200:CDS |
| GGTGCATGCTTTCCGTCGTC+TGG | 0.400724 | 3_2:+76581716 | None:intergenic |
| CCAATGGAAAACAATATTCC+AGG | 0.411904 | 3_2:+76580500 | None:intergenic |
| ACATATCCAGTTGCTAAAAC+TGG | 0.412373 | 3_2:-76583966 | Msa0426200:CDS |
| TGTCAAGTTCACTGCGGATA+AGG | 0.413444 | 3_2:+76584006 | None:intergenic |
| TCCACTGCTGGCTACATCAT+TGG | 0.424877 | 3_2:-76582433 | Msa0426200:CDS |
| GTTCTTGGAAAGCCAATTCT+GGG | 0.436845 | 3_2:+76584042 | None:intergenic |
| CCTCTAGCTCCCTCCTCAGC+AGG | 0.446876 | 3_2:+76582645 | None:intergenic |
| CGCAGTGAACTTGACAAACT+TGG | 0.449993 | 3_2:-76583999 | Msa0426200:CDS |
| ATGCACTTCCCTTTGTACCT+TGG | 0.451159 | 3_2:-76584156 | Msa0426200:CDS |
| ATCAGCACGAATAGCGATGA+TGG | 0.452920 | 3_2:+76583911 | None:intergenic |
| TTTCTCATTTCTGATTCCAA+TGG | 0.462714 | 3_2:+76580484 | None:intergenic |
| GTCAAGTTCACTGCGGATAA+GGG | 0.470836 | 3_2:+76584007 | None:intergenic |
| TTTGCAGGTTATTGAAGGAC+AGG | 0.472506 | 3_2:-76580717 | Msa0426200:intron |
| TTTCAGACAACGATTAAAAG+AGG | 0.472816 | 3_2:-76581692 | Msa0426200:intron |
| GAGAAAGAGACAACATTTGA+TGG | 0.473847 | 3_2:-76584210 | Msa0426200:exon |
| TTGAAGTTCCACACACACTA+AGG | 0.474587 | 3_2:+76584564 | None:intergenic |
| TGCTTTCCACTTCAGGAACA+AGG | 0.475863 | 3_2:-76584301 | Msa0426200:five_prime_UTR |
| TAATGTTTGCAGGTTATTGA+AGG | 0.477164 | 3_2:-76580722 | Msa0426200:intron |
| GTTCCACACACACTAAGGTT+AGG | 0.480393 | 3_2:+76584569 | None:intergenic |
| TCTTTGTCATTGACAACAGC+AGG | 0.485579 | 3_2:+76580635 | None:intergenic |
| ATTGATGCTACGACATCTAC+TGG | 0.492280 | 3_2:-76582561 | Msa0426200:CDS |
| AGAGTTGGCCGACTTCTGCT+TGG | 0.497776 | 3_2:-76580593 | Msa0426200:CDS |
| TCAGCGCAAAGATAAGCTTA+AGG | 0.505619 | 3_2:-76583458 | Msa0426200:intron |
| CAGTGGATCTACAGCCTGGT+GGG | 0.506382 | 3_2:+76582449 | None:intergenic |
| CACTGCAACAGCTTGTCTCA+AGG | 0.507821 | 3_2:-76582401 | Msa0426200:CDS |
| CCAGCAGCTGTAAAAGGCCC+TGG | 0.508450 | 3_2:+76582522 | None:intergenic |
| GATACATCAGTAATAACAAA+AGG | 0.511130 | 3_2:+76580334 | None:intergenic |
| ACAAGGGTCAACGAGTGGCT+TGG | 0.513160 | 3_2:-76584284 | Msa0426200:five_prime_UTR |
| GTTGACCCTTGTTCCTGAAG+TGG | 0.515450 | 3_2:+76584295 | None:intergenic |
| AAACACAATAAGTACATGAA+TGG | 0.518642 | 3_2:+76584184 | None:intergenic |
| TGGTTAGGAACTTGTTGAGT+GGG | 0.518955 | 3_2:-76583569 | Msa0426200:intron |
| CCATCATATGTAAAATTTGG+AGG | 0.522089 | 3_2:-76581751 | Msa0426200:CDS |
| GATTCTGAGTTCAGCCCAGA+AGG | 0.530256 | 3_2:-76584108 | Msa0426200:CDS |
| CATCTACATGTCGAGAGAGT+TGG | 0.530513 | 3_2:-76580608 | Msa0426200:CDS |
| GGAATCAGAAATGAGAAAGT+AGG | 0.531619 | 3_2:-76580479 | Msa0426200:CDS |
| GCCTCACAAATGATAAAAGA+AGG | 0.534222 | 3_2:-76582621 | Msa0426200:CDS |
| GAATACAAGAGCAAAATTGA+TGG | 0.536081 | 3_2:-76583547 | Msa0426200:CDS |
| ACACTTCACCAAGGTACAAA+GGG | 0.537229 | 3_2:+76584148 | None:intergenic |
| AGCTGCTGGATGCATCTTTG+AGG | 0.539162 | 3_2:-76582508 | Msa0426200:CDS |
| ACTGCAACAGCTTGTCTCAA+GGG | 0.552626 | 3_2:-76582400 | Msa0426200:CDS |
| TAAAGTGGGGTAACCTGCAA+AGG | 0.552801 | 3_2:+76583876 | None:intergenic |
| ATATGTTGATTTCAAAGAAG+AGG | 0.556877 | 3_2:-76580672 | Msa0426200:CDS |
| CACACTTCACCAAGGTACAA+AGG | 0.561395 | 3_2:+76584147 | None:intergenic |
| CAAAATCTCTCATCTACTTG+AGG | 0.561815 | 3_2:-76584544 | Msa0426200:five_prime_UTR |
| GCCAATGATGTAGCCAGCAG+TGG | 0.567435 | 3_2:+76582432 | None:intergenic |
| AAATGTCCATGAAGCCAAGA+AGG | 0.567889 | 3_2:-76580564 | Msa0426200:CDS |
| GAGCTATAGCATCGATTCCA+GGG | 0.569617 | 3_2:-76582539 | Msa0426200:CDS |
| TAACCTAACCTTAGTGTGTG+TGG | 0.571216 | 3_2:-76584572 | None:intergenic |
| AGTGGATCTACAGCCTGGTG+GGG | 0.571496 | 3_2:+76582450 | None:intergenic |
| CCAGGCTGTAGATCCACTGC+TGG | 0.573212 | 3_2:-76582445 | Msa0426200:CDS |
| CCAGCAGTGGATCTACAGCC+TGG | 0.576768 | 3_2:+76582445 | None:intergenic |
| TAGCTCCCTCCTCAGCAGGT+TGG | 0.580361 | 3_2:+76582649 | None:intergenic |
| GTTACTTACGTCAAAGGAGG+GGG | 0.581861 | 3_2:-76581790 | Msa0426200:CDS |
| GTGGATCTACAGCCTGGTGG+GGG | 0.591638 | 3_2:+76582451 | None:intergenic |
| CCTGCTGAGGAGGGAGCTAG+AGG | 0.592496 | 3_2:-76582645 | Msa0426200:CDS |
| GCAGTGGATCTACAGCCTGG+TGG | 0.592846 | 3_2:+76582448 | None:intergenic |
| CAACATATGCATTACATCTG+TGG | 0.596314 | 3_2:+76580687 | None:intergenic |
| CTGTCTGTTACTTACGTCAA+AGG | 0.596467 | 3_2:-76581796 | Msa0426200:CDS |
| TGTTACTTACGTCAAAGGAG+GGG | 0.597194 | 3_2:-76581791 | Msa0426200:CDS |
| AAAGTGGGGTAACCTGCAAA+GGG | 0.604350 | 3_2:+76583877 | None:intergenic |
| GAAGCCAAGAAGGCGATGGT+AGG | 0.605651 | 3_2:-76580554 | Msa0426200:CDS |
| GCACATACTTGACTATGAAG+AGG | 0.609774 | 3_2:+76582369 | None:intergenic |
| TCAGCACGAATAGCGATGAT+GGG | 0.611137 | 3_2:+76583912 | None:intergenic |
| TTTCTGGACCAAGCAGAAGT+CGG | 0.612518 | 3_2:+76580585 | None:intergenic |
| GGACAGAGAGAGCTTGAACG+TGG | 0.613574 | 3_2:-76584234 | Msa0426200:five_prime_UTR |
| CTGTTACTTACGTCAAAGGA+GGG | 0.620187 | 3_2:-76581792 | Msa0426200:CDS |
| TACTCTAAGGAGCCAGACGA+CGG | 0.626826 | 3_2:-76581728 | Msa0426200:CDS |
| GCTTTCCACTTCAGGAACAA+GGG | 0.630938 | 3_2:-76584300 | Msa0426200:five_prime_UTR |
| CCATGAAGCCAAGAAGGCGA+TGG | 0.633845 | 3_2:-76580558 | Msa0426200:CDS |
| TCTGTTACTTACGTCAAAGG+AGG | 0.641149 | 3_2:-76581793 | Msa0426200:CDS |
| AACAGCAGGATATGGCGTGA+AGG | 0.641655 | 3_2:+76580649 | None:intergenic |
| CAGGAACAAGGGTCAACGAG+TGG | 0.655213 | 3_2:-76584289 | Msa0426200:five_prime_UTR |
| GATGGCAGAATGCATGCTTG+TGG | 0.663638 | 3_2:-76583529 | Msa0426200:CDS |
| TCATGCTACTATGCTATTAG+GGG | 0.665400 | 3_2:-76583497 | Msa0426200:CDS |
| TTGGTTAGGAACTTGTTGAG+TGG | 0.677704 | 3_2:-76583570 | Msa0426200:intron |
| ATAAGCATCACACTTCACCA+AGG | 0.746407 | 3_2:+76584139 | None:intergenic |
| CAAGTTTGTCAAGTTCACTG+CGG | 0.769058 | 3_2:+76584000 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAATATTGTTTTTCAAATA+AGG | - | chr3_2:76581206-76581225 | Msa0426200:intron | 15.0% |
| !!! | TATTATTTTTTATCTGATGT+TGG | - | chr3_2:76581229-76581248 | Msa0426200:intron | 15.0% |
| !! | TCTTTGGTATTAATATTAAA+GGG | - | chr3_2:76582138-76582157 | Msa0426200:intron | 15.0% |
| !!! | TGAGTTGAACAATAAATTTA+AGG | - | chr3_2:76581082-76581101 | Msa0426200:intron | 20.0% |
| !! | AAATGAATTGTGAAATAGTT+TGG | - | chr3_2:76581635-76581654 | Msa0426200:intron | 20.0% |
| !!! | AACATTAGGTTTATACATTT+TGG | + | chr3_2:76581910-76581929 | None:intergenic | 20.0% |
| !!! | GTTGATTTATTTTATCCTAA+AGG | + | chr3_2:76581945-76581964 | None:intergenic | 20.0% |
| !! | TAATATTAATACCAAAGAGT+AGG | + | chr3_2:76582136-76582155 | None:intergenic | 20.0% |
| !! | CTCTTTGGTATTAATATTAA+AGG | - | chr3_2:76582137-76582156 | Msa0426200:intron | 20.0% |
| !!! | TAAACTTTTATTCTATGTCT+TGG | - | chr3_2:76582586-76582605 | Msa0426200:CDS | 20.0% |
| !! | TATTTCATTTCTATAAGCTT+AGG | - | chr3_2:76582919-76582938 | Msa0426200:intron | 20.0% |
| !! | ATTTCATTTCTATAAGCTTA+GGG | - | chr3_2:76582920-76582939 | Msa0426200:intron | 20.0% |
| !! | TAAATGATATCTAAACTTGT+CGG | + | chr3_2:76583169-76583188 | None:intergenic | 20.0% |
| !!! | TTCCTTTATGTATTTTCTAT+TGG | + | chr3_2:76583299-76583318 | None:intergenic | 20.0% |
| !! | AGTATAAAACGAGAAAATAT+TGG | + | chr3_2:76583517-76583536 | None:intergenic | 20.0% |
| !!! | TCGTTTTATACTATTATTCT+AGG | - | chr3_2:76583525-76583544 | Msa0426200:CDS | 20.0% |
| !! | AAAACCTAGAAAAGATTAAT+GGG | + | chr3_2:76583770-76583789 | None:intergenic | 20.0% |
| !! | TAAAACCTAGAAAAGATTAA+TGG | + | chr3_2:76583771-76583790 | None:intergenic | 20.0% |
| !!! | CAAGATTTATAAGTTTTGTA+TGG | + | chr3_2:76584067-76584086 | None:intergenic | 20.0% |
| !! | TTTGAGCAAATATTTTGTCA+AGG | + | chr3_2:76580320-76580339 | None:intergenic | 25.0% |
| ! | GTAAATCGCAATTTCAAATT+AGG | - | chr3_2:76580400-76580419 | Msa0426200:CDS | 25.0% |
| !!! | GATGGATTCTTATGTTTTTT+CGG | + | chr3_2:76580431-76580450 | None:intergenic | 25.0% |
| !! | TTGAAATCCAGTAATGTTTT+CGG | + | chr3_2:76580488-76580507 | None:intergenic | 25.0% |
| ! | AGAAGAGACAAACAATAATT+TGG | - | chr3_2:76580572-76580591 | Msa0426200:CDS | 25.0% |
| ! | GAAGAGACAAACAATAATTT+GGG | - | chr3_2:76580573-76580592 | Msa0426200:CDS | 25.0% |
| ! | AAACACAATAAGTACATGAA+TGG | + | chr3_2:76580647-76580666 | None:intergenic | 25.0% |
| ! | GTTATGTTTGTATGTATTTC+TGG | - | chr3_2:76581054-76581073 | Msa0426200:intron | 25.0% |
| !!! | AAGAATTGATTCTAAGGTAA+CGG | + | chr3_2:76581144-76581163 | None:intergenic | 25.0% |
| !! | ACAACTAAGAATTGATTCTA+AGG | + | chr3_2:76581150-76581169 | None:intergenic | 25.0% |
| ! | CAAATATTTACAAGGATTTG+AGG | + | chr3_2:76581679-76581698 | None:intergenic | 25.0% |
| !!! | TATAAGCTAATGGATTTTCT+TGG | - | chr3_2:76581752-76581771 | Msa0426200:CDS | 25.0% |
| ! | AGAAATGCAAAAATAGTATG+TGG | - | chr3_2:76582739-76582758 | Msa0426200:intron | 25.0% |
| ! | TTAACTATGCCTAAAAAAGT+TGG | - | chr3_2:76582951-76582970 | Msa0426200:intron | 25.0% |
| !!! | GAAGTTATACCAACTTTTTT+AGG | + | chr3_2:76582963-76582982 | None:intergenic | 25.0% |
| ! | ATCCCATCATATGTAAAATT+TGG | - | chr3_2:76583074-76583093 | Msa0426200:intron | 25.0% |
| !! | CTCCAAATTTTACATATGAT+GGG | + | chr3_2:76583079-76583098 | None:intergenic | 25.0% |
| ! | TGCCAATAGAAAATACATAA+AGG | - | chr3_2:76583294-76583313 | Msa0426200:intron | 25.0% |
| !!! | TCACCTTAATTTCAAGTTAA+GGG | + | chr3_2:76583465-76583484 | None:intergenic | 25.0% |
| !!! | TTCACCTTAATTTCAAGTTA+AGG | + | chr3_2:76583466-76583485 | None:intergenic | 25.0% |
| !!! | AAACTATTAGCTTTTGTTCT+AGG | - | chr3_2:76583484-76583503 | Msa0426200:CDS | 25.0% |
| !! | ATATCCCATTAATCTTTTCT+AGG | - | chr3_2:76583763-76583782 | Msa0426200:intron | 25.0% |
| !!! | AGGTTTTATACTATTGTTCT+AGG | - | chr3_2:76583783-76583802 | Msa0426200:intron | 25.0% |
| ! | TATTGATAGATAATGTTTGC+AGG | - | chr3_2:76584096-76584115 | Msa0426200:CDS | 25.0% |
| !!! | ATATGTTGATTTCAAAGAAG+AGG | - | chr3_2:76584156-76584175 | Msa0426200:CDS | 25.0% |
| !! | TTTTATCAAGAAGTAATTCC+TGG | - | chr3_2:76584310-76584329 | Msa0426200:five_prime_UTR | 25.0% |
| ! | GATACATCAGTAATAACAAA+AGG | + | chr3_2:76584497-76584516 | None:intergenic | 25.0% |
| CCATGACATTTAGACATAAA+AGG | + | chr3_2:76580381-76580400 | None:intergenic | 30.0% | |
| ! | CCTTTTATGTCTAAATGTCA+TGG | - | chr3_2:76580378-76580397 | Msa0426200:CDS | 30.0% |
| ! | TGTTTTCGGTCTAACAATAT+CGG | + | chr3_2:76580474-76580493 | None:intergenic | 30.0% |
| CATTACTGGATTTCAAATTC+AGG | - | chr3_2:76580492-76580511 | Msa0426200:CDS | 30.0% | |
| TTAGCAACTGGATATGTATA+AGG | + | chr3_2:76580859-76580878 | None:intergenic | 30.0% | |
| AGGCTAAAAAACAATTGTAG+AGG | - | chr3_2:76581102-76581121 | Msa0426200:intron | 30.0% | |
| !! | AGAATTGATTCTAAGGTAAC+GGG | + | chr3_2:76581143-76581162 | None:intergenic | 30.0% |
| CCATAAGAATAGTGTATGTT+TGG | + | chr3_2:76581177-76581196 | None:intergenic | 30.0% | |
| CCAAACATACACTATTCTTA+TGG | - | chr3_2:76581174-76581193 | Msa0426200:intron | 30.0% | |
| GAAAAACAATATTCTCCTCA+AGG | + | chr3_2:76581201-76581220 | None:intergenic | 30.0% | |
| GAATACAAGAGCAAAATTGA+TGG | - | chr3_2:76581281-76581300 | Msa0426200:intron | 30.0% | |
| CTCAATCTTAATCACATTGT+AGG | + | chr3_2:76581464-76581483 | None:intergenic | 30.0% | |
| CTACAATGTGATTAAGATTG+AGG | - | chr3_2:76581462-76581481 | Msa0426200:intron | 30.0% | |
| TTAAATATCGGTCACAGTAA+CGG | + | chr3_2:76581549-76581568 | None:intergenic | 30.0% | |
| !!! | ATGCTCAGGGTTTTAAATAT+CGG | + | chr3_2:76581561-76581580 | None:intergenic | 30.0% |
| CACATTGAGTTAGTTCATTA+GGG | + | chr3_2:76581584-76581603 | None:intergenic | 30.0% | |
| AACACTTAGCATGAACAATA+AGG | + | chr3_2:76581610-76581629 | None:intergenic | 30.0% | |
| CTGAGATGCAAATATTTACA+AGG | + | chr3_2:76581687-76581706 | None:intergenic | 30.0% | |
| AGGTTAAGTAGTTATTAGCA+AGG | + | chr3_2:76581710-76581729 | None:intergenic | 30.0% | |
| CTGAATCTGATATAAGCTAA+TGG | - | chr3_2:76581742-76581761 | Msa0426200:CDS | 30.0% | |
| CTTTCAATGAACTTATGATC+CGG | + | chr3_2:76581825-76581844 | None:intergenic | 30.0% | |
| ! | TTGAATTGTCTTTTGCTTAG+TGG | - | chr3_2:76581987-76582006 | Msa0426200:intron | 30.0% |
| ! | AAGTAGATCTTTTCTTCTGT+TGG | - | chr3_2:76582037-76582056 | Msa0426200:intron | 30.0% |
| ! | TCCTTCTTTTATCATTTGTG+AGG | + | chr3_2:76582211-76582230 | None:intergenic | 30.0% |
| !! | ATCTTTGAGGCAAAAATTGA+AGG | - | chr3_2:76582333-76582352 | Msa0426200:intron | 30.0% |
| TATGACAAATCCACAAGTTT+GGG | + | chr3_2:76582561-76582580 | None:intergenic | 30.0% | |
| TTATGACAAATCCACAAGTT+TGG | + | chr3_2:76582562-76582581 | None:intergenic | 30.0% | |
| TCTTATATAGCTAGAAGTCT+AGG | - | chr3_2:76582631-76582650 | Msa0426200:CDS | 30.0% | |
| AAGCATTATTCTAGACATCA+TGG | + | chr3_2:76582696-76582715 | None:intergenic | 30.0% | |
| CATGTATGCTAGAATTTGAT+TGG | - | chr3_2:76582810-76582829 | Msa0426200:intron | 30.0% | |
| ! | CCTCCAAATTTTACATATGA+TGG | + | chr3_2:76583080-76583099 | None:intergenic | 30.0% |
| CCATCATATGTAAAATTTGG+AGG | - | chr3_2:76583077-76583096 | Msa0426200:intron | 30.0% | |
| !! | TAAAATTTGGAGGTACTCTA+AGG | - | chr3_2:76583087-76583106 | Msa0426200:intron | 30.0% |
| ! | CTTTTAATCGTTGTCTGAAA+TGG | + | chr3_2:76583136-76583155 | None:intergenic | 30.0% |
| TTTCAGACAACGATTAAAAG+AGG | - | chr3_2:76583136-76583155 | Msa0426200:intron | 30.0% | |
| CTTGTTGCAATACTCATTTA+TGG | - | chr3_2:76583394-76583413 | Msa0426200:intron | 30.0% | |
| GAGGAAAAGAGAACATATTA+TGG | + | chr3_2:76583443-76583462 | None:intergenic | 30.0% | |
| ATTAGCTGAAAAACAGCTAA+TGG | + | chr3_2:76583643-76583662 | None:intergenic | 30.0% | |
| ATCAACAATTCAAGTACAGT+TGG | + | chr3_2:76583732-76583751 | None:intergenic | 30.0% | |
| ATTAGCTGAAAAACAGCTTA+TGG | + | chr3_2:76583901-76583920 | None:intergenic | 30.0% | |
| CATAAACACTTAACAGATGA+GGG | + | chr3_2:76584017-76584036 | None:intergenic | 30.0% | |
| ACATAAACACTTAACAGATG+AGG | + | chr3_2:76584018-76584037 | None:intergenic | 30.0% | |
| TAATGTTTGCAGGTTATTGA+AGG | - | chr3_2:76584106-76584125 | Msa0426200:CDS | 30.0% | |
| TTTCTCATTTCTGATTCCAA+TGG | + | chr3_2:76584347-76584366 | None:intergenic | 30.0% | |
| CTCATCAAGAAAGAAAAATG+GGG | + | chr3_2:76584395-76584414 | None:intergenic | 30.0% | |
| CCTCATCAAGAAAGAAAAAT+GGG | + | chr3_2:76584396-76584415 | None:intergenic | 30.0% | |
| TCCTCATCAAGAAAGAAAAA+TGG | + | chr3_2:76584397-76584416 | None:intergenic | 30.0% | |
| CAAAATCTCTCATCTACTTG+AGG | - | chr3_2:76580284-76580303 | Msa0426200:three_prime_UTR | 35.0% | |
| TTGACGTTGAGCTAAAAAGA+TGG | + | chr3_2:76580449-76580468 | None:intergenic | 35.0% | |
| TGTTAGACCGAAAACATTAC+TGG | - | chr3_2:76580478-76580497 | Msa0426200:CDS | 35.0% | |
| GAGAAAGAGACAACATTTGA+TGG | - | chr3_2:76580618-76580637 | Msa0426200:CDS | 35.0% | |
| ! | CAACCAATCTTTTTCCTTCT+GGG | + | chr3_2:76580737-76580756 | None:intergenic | 35.0% |
| ACATATCCAGTTGCTAAAAC+TGG | - | chr3_2:76580862-76580881 | Msa0426200:intron | 35.0% | |
| !! | ACAATACCAGTTTTAGCAAC+TGG | + | chr3_2:76580871-76580890 | None:intergenic | 35.0% |
| ACTGGTATTGTTGCTCAAAT+TGG | - | chr3_2:76580880-76580899 | Msa0426200:intron | 35.0% | |
| ! | ATTGTTGCTCAAATTGGTTC+TGG | - | chr3_2:76580886-76580905 | Msa0426200:intron | 35.0% |
| CTCATGCTACTATGCTATTA+GGG | - | chr3_2:76581330-76581349 | Msa0426200:intron | 35.0% | |
| TCATGCTACTATGCTATTAG+GGG | - | chr3_2:76581331-76581350 | Msa0426200:intron | 35.0% | |
| TTAATCACATTGTAGGTCAG+TGG | + | chr3_2:76581457-76581476 | None:intergenic | 35.0% | |
| CCACATTGAGTTAGTTCATT+AGG | + | chr3_2:76581585-76581604 | None:intergenic | 35.0% | |
| CCTAATGAACTAACTCAATG+TGG | - | chr3_2:76581582-76581601 | Msa0426200:intron | 35.0% | |
| TATCAGATTCAGTGTGATTG+TGG | + | chr3_2:76581734-76581753 | None:intergenic | 35.0% | |
| ! | GAACTCTACTTCACAACTTT+TGG | - | chr3_2:76581779-76581798 | Msa0426200:CDS | 35.0% |
| TACAATGACGTGCTAATTAC+CGG | - | chr3_2:76581803-76581822 | Msa0426200:intron | 35.0% | |
| GGAACAAAGAGCTAAACATT+AGG | + | chr3_2:76581924-76581943 | None:intergenic | 35.0% | |
| !! | GTTTAGCTCTTTGTTCCTTT+AGG | - | chr3_2:76581927-76581946 | Msa0426200:intron | 35.0% |
| GCCTCACAAATGATAAAAGA+AGG | - | chr3_2:76582207-76582226 | Msa0426200:intron | 35.0% | |
| TTCACAACAAGAACTATCCA+TGG | - | chr3_2:76582501-76582520 | Msa0426200:CDS | 35.0% | |
| ATTGTTGCAACTAAAAGCCA+TGG | + | chr3_2:76582521-76582540 | None:intergenic | 35.0% | |
| ATGACAAATCCACAAGTTTG+GGG | + | chr3_2:76582560-76582579 | None:intergenic | 35.0% | |
| AAAAATAGTATGTGGCACAG+TGG | - | chr3_2:76582747-76582766 | Msa0426200:intron | 35.0% | |
| !! | ACACTGCTGTTTCTTACAAA+GGG | + | chr3_2:76582879-76582898 | None:intergenic | 35.0% |
| !! | TACACTGCTGTTTCTTACAA+AGG | + | chr3_2:76582880-76582899 | None:intergenic | 35.0% |
| TTCGTCTTGCAACATATCTA+TGG | - | chr3_2:76583237-76583256 | Msa0426200:intron | 35.0% | |
| ACAGCTCATCACTATCATTT+AGG | + | chr3_2:76583344-76583363 | None:intergenic | 35.0% | |
| ! | AAATGATAGTGATGAGCTGT+AGG | - | chr3_2:76583344-76583363 | Msa0426200:intron | 35.0% |
| !! | CCTTAATTTCAAGTTAAGGG+AGG | + | chr3_2:76583462-76583481 | None:intergenic | 35.0% |
| ! | CCTCCCTTAACTTGAAATTA+AGG | - | chr3_2:76583459-76583478 | Msa0426200:CDS | 35.0% |
| ACTATTATTCTAGGCCTGTT+TGG | - | chr3_2:76583534-76583553 | Msa0426200:CDS | 35.0% | |
| CTATTATTCTAGGCCTGTTT+GGG | - | chr3_2:76583535-76583554 | Msa0426200:CDS | 35.0% | |
| ! | GATGTTTTCATAAGCTATCC+TGG | + | chr3_2:76583678-76583697 | None:intergenic | 35.0% |
| AGACTGTTTCAGAAAGCTTA+TGG | - | chr3_2:76583854-76583873 | Msa0426200:intron | 35.0% | |
| AAGTTGTAAATAAGCGAACC+TGG | + | chr3_2:76583936-76583955 | None:intergenic | 35.0% | |
| CAACATATGCATTACATCTG+TGG | + | chr3_2:76584144-76584163 | None:intergenic | 35.0% | |
| CCAATGGAAAACAATATTCC+AGG | + | chr3_2:76584331-76584350 | None:intergenic | 35.0% | |
| ! | CCTGGAATATTGTTTTCCAT+TGG | - | chr3_2:76584328-76584347 | Msa0426200:five_prime_UTR | 35.0% |
| GGAATCAGAAATGAGAAAGT+AGG | - | chr3_2:76584349-76584368 | Msa0426200:five_prime_UTR | 35.0% | |
| !! | CCCATTTTTCTTTCTTGATG+AGG | - | chr3_2:76584393-76584412 | Msa0426200:five_prime_UTR | 35.0% |
| TTGAAGTTCCACACACACTA+AGG | + | chr3_2:76580267-76580286 | None:intergenic | 40.0% | |
| ACACTTCACCAAGGTACAAA+GGG | + | chr3_2:76580683-76580702 | None:intergenic | 40.0% | |
| ATAAGCATCACACTTCACCA+AGG | + | chr3_2:76580692-76580711 | None:intergenic | 40.0% | |
| ! | CCAACCAATCTTTTTCCTTC+TGG | + | chr3_2:76580738-76580757 | None:intergenic | 40.0% |
| CCAGAAGGAAAAAGATTGGT+TGG | - | chr3_2:76580735-76580754 | Msa0426200:intron | 40.0% | |
| GATTCATCAACACCCAGAAT+TGG | - | chr3_2:76580774-76580793 | Msa0426200:intron | 40.0% | |
| GTTCTTGGAAAGCCAATTCT+GGG | + | chr3_2:76580789-76580808 | None:intergenic | 40.0% | |
| TGTTCTTGGAAAGCCAATTC+TGG | + | chr3_2:76580790-76580809 | None:intergenic | 40.0% | |
| CAAGTTTGTCAAGTTCACTG+CGG | + | chr3_2:76580831-76580850 | None:intergenic | 40.0% | |
| ACACTTAAGGAGCTAAAGTG+GGG | + | chr3_2:76580968-76580987 | None:intergenic | 40.0% | |
| CACACTTAAGGAGCTAAAGT+GGG | + | chr3_2:76580969-76580988 | None:intergenic | 40.0% | |
| ACACACTTAAGGAGCTAAAG+TGG | + | chr3_2:76580970-76580989 | None:intergenic | 40.0% | |
| TAGCTCCTTAAGTGTGTGTT+TGG | - | chr3_2:76580973-76580992 | Msa0426200:intron | 40.0% | |
| CACAACCAAACACACACTTA+AGG | + | chr3_2:76580981-76581000 | None:intergenic | 40.0% | |
| CACTATTCTTATGGTCCTTG+AGG | - | chr3_2:76581183-76581202 | Msa0426200:intron | 40.0% | |
| !! | TATCTGATGTTGGTGATGCT+TGG | - | chr3_2:76581239-76581258 | Msa0426200:intron | 40.0% |
| !! | TTGGTTAGGAACTTGTTGAG+TGG | - | chr3_2:76581258-76581277 | Msa0426200:intron | 40.0% |
| !! | TGGTTAGGAACTTGTTGAGT+GGG | - | chr3_2:76581259-76581278 | Msa0426200:intron | 40.0% |
| GCTCATGCTACTATGCTATT+AGG | - | chr3_2:76581329-76581348 | Msa0426200:intron | 40.0% | |
| TCAGCGCAAAGATAAGCTTA+AGG | - | chr3_2:76581370-76581389 | Msa0426200:intron | 40.0% | |
| TAGTTCATTAGGGATGCTCA+GGG | + | chr3_2:76581574-76581593 | None:intergenic | 40.0% | |
| TTAGTTCATTAGGGATGCTC+AGG | + | chr3_2:76581575-76581594 | None:intergenic | 40.0% | |
| AGATTCAGTGTGATTGTGGA+AGG | + | chr3_2:76581730-76581749 | None:intergenic | 40.0% | |
| ! | TTGTCTTTTGCTTAGTGGTG+TGG | - | chr3_2:76581992-76582011 | Msa0426200:intron | 40.0% |
| ! | CTTTTCTTCTGTTGGTGTGT+TGG | - | chr3_2:76582045-76582064 | Msa0426200:intron | 40.0% |
| AAGACTGTCATCCTACTCTT+TGG | - | chr3_2:76582122-76582141 | Msa0426200:intron | 40.0% | |
| ATTGATGCTACGACATCTAC+TGG | - | chr3_2:76582267-76582286 | Msa0426200:intron | 40.0% | |
| GGCTACATCATTGGCAATAT+TGG | - | chr3_2:76582404-76582423 | Msa0426200:CDS | 40.0% | |
| GCACATACTTGACTATGAAG+AGG | + | chr3_2:76582462-76582481 | None:intergenic | 40.0% | |
| TATGTCTTGGCTTCTCTCTT+TGG | - | chr3_2:76582599-76582618 | Msa0426200:CDS | 40.0% | |
| ATGCTTATTGTTACGAGACG+AGG | - | chr3_2:76582710-76582729 | Msa0426200:intron | 40.0% | |
| ACAGCAGTGTAGTTATGTCT+AGG | - | chr3_2:76582889-76582908 | Msa0426200:intron | 40.0% | |
| GACAACTGAGCATCACATAT+TGG | - | chr3_2:76583000-76583019 | Msa0426200:intron | 40.0% | |
| TAAGTAACAGACAGTACCTG+TGG | + | chr3_2:76583026-76583045 | None:intergenic | 40.0% | |
| ! | CTGTCTGTTACTTACGTCAA+AGG | - | chr3_2:76583032-76583051 | Msa0426200:intron | 40.0% |
| ! | TCTGTTACTTACGTCAAAGG+AGG | - | chr3_2:76583035-76583054 | Msa0426200:intron | 40.0% |
| ! | CTGTTACTTACGTCAAAGGA+GGG | - | chr3_2:76583036-76583055 | Msa0426200:intron | 40.0% |
| ! | TGTTACTTACGTCAAAGGAG+GGG | - | chr3_2:76583037-76583056 | Msa0426200:intron | 40.0% |
| GCTATAAGCTAAACCCAAAC+AGG | + | chr3_2:76583551-76583570 | None:intergenic | 40.0% | |
| AGACTGTTTCAGAAAGCTTG+TGG | - | chr3_2:76583596-76583615 | Msa0426200:intron | 40.0% | |
| GCTAATTTCATAACCTCTCC+AGG | - | chr3_2:76583657-76583676 | Msa0426200:intron | 40.0% | |
| TTTCATAAGCTATCCTGGAG+AGG | + | chr3_2:76583673-76583692 | None:intergenic | 40.0% | |
| ! | ACTATTGTTCTAGGCCTGTT+TGG | - | chr3_2:76583792-76583811 | Msa0426200:intron | 40.0% |
| ! | CTATTGTTCTAGGCCTGTTT+GGG | - | chr3_2:76583793-76583812 | Msa0426200:intron | 40.0% |
| GCTAATTTCATAACCTCTCC+AGG | - | chr3_2:76583657-76583676 | Msa0426200:intron | 40.0% | |
| TTTGCAGGTTATTGAAGGAC+AGG | - | chr3_2:76584111-76584130 | Msa0426200:CDS | 40.0% | |
| TCATTGACAACAGCAGGATA+TGG | + | chr3_2:76584190-76584209 | None:intergenic | 40.0% | |
| TCTTTGTCATTGACAACAGC+AGG | + | chr3_2:76584196-76584215 | None:intergenic | 40.0% | |
| ! | TTGGCTTCATGGACATTTTC+TGG | + | chr3_2:76584262-76584281 | None:intergenic | 40.0% |
| AAATGTCCATGAAGCCAAGA+AGG | - | chr3_2:76584264-76584283 | Msa0426200:five_prime_UTR | 40.0% | |
| ! | AAAGAAAAATGGGGAGTGTG+GGG | + | chr3_2:76584386-76584405 | None:intergenic | 40.0% |
| ! | GAAAGAAAAATGGGGAGTGT+GGG | + | chr3_2:76584387-76584406 | None:intergenic | 40.0% |
| AGAAAGAAAAATGGGGAGTG+TGG | + | chr3_2:76584388-76584407 | None:intergenic | 40.0% | |
| GATGAGGAAGCTCTTTCAAT+TGG | - | chr3_2:76584409-76584428 | Msa0426200:five_prime_UTR | 40.0% | |
| GAAGTTGTGCTTTCCACTTC+AGG | - | chr3_2:76580520-76580539 | Msa0426200:CDS | 45.0% | |
| TGCTTTCCACTTCAGGAACA+AGG | - | chr3_2:76580527-76580546 | Msa0426200:CDS | 45.0% | |
| GCTTTCCACTTCAGGAACAA+GGG | - | chr3_2:76580528-76580547 | Msa0426200:CDS | 45.0% | |
| ATGCACTTCCCTTTGTACCT+TGG | - | chr3_2:76580672-76580691 | Msa0426200:CDS | 45.0% | |
| CACACTTCACCAAGGTACAA+AGG | + | chr3_2:76580684-76580703 | None:intergenic | 45.0% | |
| CAGCCCAGAAGGAAAAAGAT+TGG | - | chr3_2:76580731-76580750 | Msa0426200:intron | 45.0% | |
| GTCAAGTTCACTGCGGATAA+GGG | + | chr3_2:76580824-76580843 | None:intergenic | 45.0% | |
| TGTCAAGTTCACTGCGGATA+AGG | + | chr3_2:76580825-76580844 | None:intergenic | 45.0% | |
| CGCAGTGAACTTGACAAACT+TGG | - | chr3_2:76580829-76580848 | Msa0426200:intron | 45.0% | |
| TCAGCACGAATAGCGATGAT+GGG | + | chr3_2:76580919-76580938 | None:intergenic | 45.0% | |
| ATCAGCACGAATAGCGATGA+TGG | + | chr3_2:76580920-76580939 | None:intergenic | 45.0% | |
| ! | CATCGCTATTCGTGCTGATA+TGG | - | chr3_2:76580921-76580940 | Msa0426200:intron | 45.0% |
| AAAGTGGGGTAACCTGCAAA+GGG | + | chr3_2:76580954-76580973 | None:intergenic | 45.0% | |
| TAAAGTGGGGTAACCTGCAA+AGG | + | chr3_2:76580955-76580974 | None:intergenic | 45.0% | |
| !! | GATGTTGGTGATGCTTGGTT+AGG | - | chr3_2:76581244-76581263 | Msa0426200:intron | 45.0% |
| CAGGAAATCGCGTTCAAATG+CGG | + | chr3_2:76581497-76581516 | None:intergenic | 45.0% | |
| CGCGATTTCCTGCAATCTTA+AGG | - | chr3_2:76581505-76581524 | Msa0426200:intron | 45.0% | |
| GTCGTGATCCTTAAGATTGC+AGG | + | chr3_2:76581516-76581535 | None:intergenic | 45.0% | |
| ! | ACTTCTTTTCCAACCTGCTG+AGG | - | chr3_2:76582170-76582189 | Msa0426200:intron | 45.0% |
| !! | GAGCTATAGCATCGATTCCA+GGG | - | chr3_2:76582289-76582308 | Msa0426200:intron | 45.0% |
| ATGCATCCAGCAGCTGTAAA+AGG | + | chr3_2:76582315-76582334 | None:intergenic | 45.0% | |
| ! | GAGGCAAAAATTGAAGGCGT+AGG | - | chr3_2:76582339-76582358 | Msa0426200:intron | 45.0% |
| ! | GCAAAAATTGAAGGCGTAGG+TGG | - | chr3_2:76582342-76582361 | Msa0426200:intron | 45.0% |
| ACTGCAACAGCTTGTCTCAA+GGG | - | chr3_2:76582428-76582447 | Msa0426200:CDS | 45.0% | |
| GAGAAACTTCCCCAAACTTG+TGG | - | chr3_2:76582548-76582567 | Msa0426200:CDS | 45.0% | |
| !! | TTGGCTTCTCTCTTTGGAAC+TGG | - | chr3_2:76582605-76582624 | Msa0426200:CDS | 45.0% |
| GTTACTTACGTCAAAGGAGG+GGG | - | chr3_2:76583038-76583057 | Msa0426200:intron | 45.0% | |
| !! | GCTTTCTGAAACAGTCTCAC+AGG | + | chr3_2:76583593-76583612 | None:intergenic | 45.0% |
| ! | GCTCTAAGCTAAACCCAAAC+AGG | + | chr3_2:76583809-76583828 | None:intergenic | 45.0% |
| GTAAATAAGCGAACCTGGAG+AGG | + | chr3_2:76583931-76583950 | None:intergenic | 45.0% | |
| CATCTACATGTCGAGAGAGT+TGG | - | chr3_2:76584220-76584239 | Msa0426200:five_prime_UTR | 45.0% | |
| TTTCTGGACCAAGCAGAAGT+CGG | + | chr3_2:76584246-76584265 | None:intergenic | 45.0% | |
| GTTGACCCTTGTTCCTGAAG+TGG | + | chr3_2:76580536-76580555 | None:intergenic | 50.0% | |
| GATTCTGAGTTCAGCCCAGA+AGG | - | chr3_2:76580720-76580739 | Msa0426200:intron | 50.0% | |
| GGGCACTTGTGTTGTGTTCT+TGG | + | chr3_2:76580804-76580823 | None:intergenic | 50.0% | |
| TATGGATGCACTCCCTTTGC+AGG | - | chr3_2:76580939-76580958 | Msa0426200:intron | 50.0% | |
| GATGGCAGAATGCATGCTTG+TGG | - | chr3_2:76581299-76581318 | Msa0426200:intron | 50.0% | |
| GAAATCGCGTTCAAATGCGG+CGG | + | chr3_2:76581494-76581513 | None:intergenic | 50.0% | |
| ! | TCTTTTCCAACCTGCTGAGG+AGG | - | chr3_2:76582173-76582192 | Msa0426200:intron | 50.0% |
| ! | CTTTTCCAACCTGCTGAGGA+GGG | - | chr3_2:76582174-76582193 | Msa0426200:intron | 50.0% |
| !! | GGAGCTATAGCATCGATTCC+AGG | - | chr3_2:76582288-76582307 | Msa0426200:intron | 50.0% |
| AGCTGCTGGATGCATCTTTG+AGG | - | chr3_2:76582320-76582339 | Msa0426200:intron | 50.0% | |
| ! | TCCACTGCTGGCTACATCAT+TGG | - | chr3_2:76582395-76582414 | Msa0426200:CDS | 50.0% |
| CACTGCAACAGCTTGTCTCA+AGG | - | chr3_2:76582427-76582446 | Msa0426200:CDS | 50.0% | |
| GAGCATCACATATTGGCCAC+AGG | - | chr3_2:76583007-76583026 | Msa0426200:intron | 50.0% | |
| ! | TACTCTAAGGAGCCAGACGA+CGG | - | chr3_2:76583100-76583119 | Msa0426200:intron | 50.0% |
| AACAGCAGGATATGGCGTGA+AGG | + | chr3_2:76584182-76584201 | None:intergenic | 50.0% | |
| CAGGAACAAGGGTCAACGAG+TGG | - | chr3_2:76580539-76580558 | Msa0426200:CDS | 55.0% | |
| ACAAGGGTCAACGAGTGGCT+TGG | - | chr3_2:76580544-76580563 | Msa0426200:CDS | 55.0% | |
| GGACAGAGAGAGCTTGAACG+TGG | - | chr3_2:76580594-76580613 | Msa0426200:CDS | 55.0% | |
| AGTGGATCTACAGCCTGGTG+GGG | + | chr3_2:76582381-76582400 | None:intergenic | 55.0% | |
| CAGTGGATCTACAGCCTGGT+GGG | + | chr3_2:76582382-76582401 | None:intergenic | 55.0% | |
| GCCAATGATGTAGCCAGCAG+TGG | + | chr3_2:76582399-76582418 | None:intergenic | 55.0% | |
| ! | AGAGTTGGCCGACTTCTGCT+TGG | - | chr3_2:76584235-76584254 | Msa0426200:five_prime_UTR | 55.0% |
| CCATCGCCTTCTTGGCTTCA+TGG | + | chr3_2:76584273-76584292 | None:intergenic | 55.0% | |
| CCATGAAGCCAAGAAGGCGA+TGG | - | chr3_2:76584270-76584289 | Msa0426200:five_prime_UTR | 55.0% | |
| GAAGCCAAGAAGGCGATGGT+AGG | - | chr3_2:76584274-76584293 | Msa0426200:five_prime_UTR | 55.0% | |
| TTCGCCTACCATCGCCTTCT+TGG | + | chr3_2:76584281-76584300 | None:intergenic | 55.0% | |
| GCGTTCAAATGCGGCGGATG+AGG | + | chr3_2:76581488-76581507 | None:intergenic | 60.0% | |
| TAGCTCCCTCCTCAGCAGGT+TGG | + | chr3_2:76582182-76582201 | None:intergenic | 60.0% | |
| CCAGCAGCTGTAAAAGGCCC+TGG | + | chr3_2:76582309-76582328 | None:intergenic | 60.0% | |
| ! | CCAGGGCCTTTTACAGCTGC+TGG | - | chr3_2:76582306-76582325 | Msa0426200:intron | 60.0% |
| TCATGCTGCATTCCCCCACC+AGG | - | chr3_2:76582365-76582384 | Msa0426200:intron | 60.0% | |
| GTGGATCTACAGCCTGGTGG+GGG | + | chr3_2:76582380-76582399 | None:intergenic | 60.0% | |
| GCAGTGGATCTACAGCCTGG+TGG | + | chr3_2:76582383-76582402 | None:intergenic | 60.0% | |
| CCAGCAGTGGATCTACAGCC+TGG | + | chr3_2:76582386-76582405 | None:intergenic | 60.0% | |
| CCAGGCTGTAGATCCACTGC+TGG | - | chr3_2:76582383-76582402 | Msa0426200:CDS | 60.0% | |
| GGTGCATGCTTTCCGTCGTC+TGG | + | chr3_2:76583115-76583134 | None:intergenic | 60.0% | |
| ! | CCTCTAGCTCCCTCCTCAGC+AGG | + | chr3_2:76582186-76582205 | None:intergenic | 65.0% |
| CCTGCTGAGGAGGGAGCTAG+AGG | - | chr3_2:76582183-76582202 | Msa0426200:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 76580262 | 76584588 | 76580262 | ID=Msa0426200;Name=Msa0426200 |
| chr3_2 | mRNA | 76580262 | 76584588 | 76580262 | ID=Msa0426200-mRNA-1;Parent=Msa0426200;Name=Msa0426200-mRNA-1;_AED=0.38;_eAED=0.38;_QI=375|1|1|1|1|1|5|102|420 |
| chr3_2 | exon | 76580262 | 76580732 | 76580262 | ID=Msa0426200-mRNA-1:exon:19865;Parent=Msa0426200-mRNA-1 |
| chr3_2 | exon | 76581693 | 76581821 | 76581693 | ID=Msa0426200-mRNA-1:exon:19864;Parent=Msa0426200-mRNA-1 |
| chr3_2 | exon | 76582377 | 76582691 | 76582377 | ID=Msa0426200-mRNA-1:exon:19863;Parent=Msa0426200-mRNA-1 |
| chr3_2 | exon | 76583459 | 76583584 | 76583459 | ID=Msa0426200-mRNA-1:exon:19862;Parent=Msa0426200-mRNA-1 |
| chr3_2 | exon | 76583890 | 76584588 | 76583890 | ID=Msa0426200-mRNA-1:exon:19861;Parent=Msa0426200-mRNA-1 |
| chr3_2 | five_prime_UTR | 76584214 | 76584588 | 76584214 | ID=Msa0426200-mRNA-1:five_prime_utr;Parent=Msa0426200-mRNA-1 |
| chr3_2 | CDS | 76583890 | 76584213 | 76583890 | ID=Msa0426200-mRNA-1:cds;Parent=Msa0426200-mRNA-1 |
| chr3_2 | CDS | 76583459 | 76583584 | 76583459 | ID=Msa0426200-mRNA-1:cds;Parent=Msa0426200-mRNA-1 |
| chr3_2 | CDS | 76582377 | 76582691 | 76582377 | ID=Msa0426200-mRNA-1:cds;Parent=Msa0426200-mRNA-1 |
| chr3_2 | CDS | 76581693 | 76581821 | 76581693 | ID=Msa0426200-mRNA-1:cds;Parent=Msa0426200-mRNA-1 |
| chr3_2 | CDS | 76580364 | 76580732 | 76580364 | ID=Msa0426200-mRNA-1:cds;Parent=Msa0426200-mRNA-1 |
| chr3_2 | three_prime_UTR | 76580262 | 76580363 | 76580262 | ID=Msa0426200-mRNA-1:three_prime_utr;Parent=Msa0426200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
