AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0427130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0427130 MtrunA17_Chr3g0129401 99.701 335 1 0 1 335 1 335 0.0 679
Msa0427130 MtrunA17_Chr8g0383381 81.548 336 59 1 1 333 1 336 0.0 558
Msa0427130 MtrunA17_Chr1g0201531 78.505 321 67 1 1 321 1 319 0.0 514
Msa0427130 MtrunA17_Chr5g0393381 50.974 308 146 4 9 312 8 314 2.41e-94 284
Msa0427130 MtrunA17_Chr1g0157501 51.456 309 139 4 16 319 14 316 4.98e-94 283
Msa0427130 MtrunA17_Chr6g0467391 39.535 301 180 2 10 309 6 305 7.67e-61 197
Msa0427130 MtrunA17_Chr6g0467371 39.535 301 180 2 10 309 6 305 7.67e-61 197
Msa0427130 MtrunA17_Chr2g0326791 37.700 313 193 2 16 327 13 324 1.73e-60 197
Msa0427130 MtrunA17_Chr4g0028931 36.333 300 189 2 10 308 6 304 3.69e-55 183
Msa0427130 MtrunA17_Chr3g0128951 37.218 266 166 1 32 297 29 293 1.45e-54 182
Msa0427130 MtrunA17_Chr3g0128961 34.828 290 166 2 32 299 29 317 1.73e-51 174
Msa0427130 MtrunA17_Chr2g0298931 29.721 323 213 5 4 318 45 361 4.01e-27 109
Msa0427130 MtrunA17_Chr5g0446851 29.260 311 203 7 20 320 62 365 8.92e-23 97.8
Msa0427130 MtrunA17_Chr3g0114581 26.269 335 210 12 18 334 23 338 1.17e-14 73.9
Msa0427130 MtrunA17_Chr1g0160071 24.843 318 214 9 18 320 22 329 1.71e-13 70.5
Msa0427130 MtrunA17_Chr7g0270591 27.622 286 187 10 25 298 26 303 8.27e-13 68.6
Msa0427130 MtrunA17_Chr8g0382081 23.693 287 211 4 24 303 22 307 4.92e-11 62.8
Msa0427130 MtrunA17_Chr2g0312911 26.518 313 206 12 7 303 2 306 8.27e-11 62.4
Msa0427130 MtrunA17_Chr3g0112981 23.390 295 208 5 24 306 35 323 8.40e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0427130 AT4G09810.1 77.246 334 76 0 1 334 1 334 0.0 547
Msa0427130 AT4G39390.3 80.838 334 61 1 2 335 3 333 0.0 535
Msa0427130 AT4G39390.1 80.838 334 61 1 2 335 7 337 0.0 535
Msa0427130 AT4G39390.2 80.838 334 61 1 2 335 7 337 0.0 535
Msa0427130 AT1G34020.2 79.180 317 66 0 18 334 18 334 0.0 532
Msa0427130 AT1G34020.1 79.180 317 66 0 18 334 18 334 0.0 532
Msa0427130 AT1G34020.3 79.180 317 66 0 18 334 18 334 0.0 532
Msa0427130 AT4G09810.2 76.534 277 65 0 58 334 1 277 2.79e-161 452
Msa0427130 AT4G09810.3 80.180 222 44 0 1 222 1 222 3.58e-133 379
Msa0427130 AT1G21070.1 49.107 336 159 6 5 333 4 334 3.30e-99 296
Msa0427130 AT5G42420.1 52.318 302 138 3 4 300 2 302 5.55e-99 296
Msa0427130 AT1G76670.2 47.688 346 159 5 1 335 1 335 3.65e-97 291
Msa0427130 AT1G76670.1 47.688 346 159 5 1 335 1 335 3.65e-97 291
Msa0427130 AT2G28315.1 35.110 319 205 2 16 334 13 329 9.18e-57 187
Msa0427130 AT2G30460.1 38.346 266 163 1 32 297 29 293 2.00e-56 187
Msa0427130 AT2G30460.2 38.346 266 163 1 32 297 29 293 2.00e-56 187
Msa0427130 AT2G28315.2 36.770 291 183 1 21 311 18 307 5.48e-56 185
Msa0427130 AT1G06890.4 36.177 293 182 3 32 321 29 319 2.53e-55 184
Msa0427130 AT1G06890.3 36.177 293 182 3 32 321 29 319 2.54e-55 184
Msa0427130 AT1G06890.2 36.177 293 182 3 32 321 29 319 2.97e-55 184
Msa0427130 AT1G06890.1 36.177 293 182 3 32 321 29 319 2.97e-55 184
Msa0427130 AT2G30460.3 37.008 254 159 1 44 297 20 272 7.99e-50 169
Msa0427130 AT2G30460.6 37.008 254 159 1 44 297 20 272 7.99e-50 169
Msa0427130 AT2G30460.5 37.008 254 159 1 44 297 20 272 7.99e-50 169
Msa0427130 AT5G42420.2 36.027 297 121 11 4 297 2 232 3.38e-38 137
Msa0427130 AT2G30460.4 37.368 190 119 0 32 221 29 218 2.21e-34 129
Msa0427130 AT5G55950.4 30.503 318 198 6 20 321 3 313 1.44e-28 113
Msa0427130 AT5G55950.1 30.503 318 198 6 20 321 63 373 3.13e-28 113
Msa0427130 AT5G55950.3 28.808 302 192 6 36 321 1 295 3.68e-22 95.5
Msa0427130 AT5G57100.1 29.771 262 172 4 20 275 70 325 8.85e-22 95.5
Msa0427130 AT5G55950.2 31.915 235 148 4 20 248 63 291 1.58e-21 93.6
Msa0427130 AT5G57100.2 29.362 235 154 4 20 248 70 298 1.28e-17 82.4
Msa0427130 AT5G57100.3 32.934 167 104 3 20 180 70 234 8.56e-14 70.9
Msa0427130 AT3G10290.1 24.830 294 199 7 24 303 68 353 4.83e-13 69.7
Msa0427130 AT1G21870.1 22.018 327 233 7 18 333 23 338 2.75e-12 67.4
Msa0427130 AT5G04160.1 24.444 315 215 9 2 303 3 307 7.53e-12 65.9
Msa0427130 AT1G77610.1 24.214 318 214 9 18 320 17 322 7.76e-12 65.9

Find 137 sgRNAs with CRISPR-Local

Find 437 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACATGATCTATAAATAAT+TGG 0.151640 3_2:-77834177 None:intergenic
GAGGAGGACAACTCTTATTT+TGG 0.199062 3_2:+77834244 Msa0427130:three_prime_UTR
GTGTAATAATTCACTAATTT+AGG 0.230529 3_2:-77828314 None:intergenic
GTTATTTACACCATAATTAT+TGG 0.234946 3_2:-77834439 None:intergenic
AAAGGAAGTGATTAAACTTT+TGG 0.242017 3_2:+77834083 Msa0427130:three_prime_UTR
TATGCAGCCACAACTTTAAC+TGG 0.250967 3_2:+77831257 Msa0427130:intron
CTTGAAGGAATTTAATATAA+AGG 0.254018 3_2:+77834528 Msa0427130:three_prime_UTR
ACTGCTAGTAGGCCCCTTTA+TGG 0.271752 3_2:+77832182 Msa0427130:CDS
GCTTAGTATTATCTTGGTTT+TGG 0.281700 3_2:+77831625 Msa0427130:CDS
AATTTGATGATATCAGATTT+AGG 0.302073 3_2:-77831353 None:intergenic
CTTCAGAGGAAATATTCTAT+TGG 0.311098 3_2:+77832111 Msa0427130:CDS
TTTAAGGAGTTGAATTTAAA+GGG 0.327501 3_2:-77828482 None:intergenic
CTGATAACTGACTGCATTGT+TGG 0.327915 3_2:+77834382 Msa0427130:three_prime_UTR
AGAAGAACGCGACGTCGTTT+TGG 0.331994 3_2:-77828603 None:intergenic
TTGAAGGAATTTAATATAAA+GGG 0.336918 3_2:+77834529 Msa0427130:three_prime_UTR
TGATAACTGACTGCATTGTT+GGG 0.343052 3_2:+77834383 Msa0427130:three_prime_UTR
GGCATGGCAATTGCAATTGC+GGG 0.344692 3_2:+77833915 Msa0427130:CDS
ATCGAAGAAATGTGAGTTGC+GGG 0.345453 3_2:-77828427 None:intergenic
TATTGGATCATTTAACTTGT+TGG 0.347599 3_2:+77832128 Msa0427130:CDS
ATTGGATCATTTAACTTGTT+GGG 0.348429 3_2:+77832129 Msa0427130:CDS
ATTTCTTCGATCTCTGAATC+TGG 0.348494 3_2:+77828439 Msa0427130:five_prime_UTR
TACAAAGCTTAGTATTATCT+TGG 0.348665 3_2:+77831619 Msa0427130:CDS
CATCTGCATTGGTAGGTTTA+CGG 0.351694 3_2:+77833791 Msa0427130:CDS
TTGCAATTGCGGGAATGATT+TGG 0.358279 3_2:+77833925 Msa0427130:CDS
CGAGTTGACGCATACGACTA+TGG 0.358338 3_2:+77832225 Msa0427130:CDS
AGGAAAATCATGCGCCCTTT+AGG 0.358491 3_2:+77834116 Msa0427130:three_prime_UTR
TGGCCATATGAAGACTATTC+TGG 0.359788 3_2:+77833833 Msa0427130:CDS
GACTATTCTGGTCCTATTCA+TGG 0.375174 3_2:+77833845 Msa0427130:CDS
GACGGTCGTTCTTAAATCGC+TGG 0.375697 3_2:+77831307 Msa0427130:CDS
ATAATTATGGTGTAAATAAC+TGG 0.378385 3_2:+77834442 Msa0427130:three_prime_UTR
CCTGCTTCTTGCATCTCAAT+TGG 0.384722 3_2:-77828336 None:intergenic
GAACTCTGTCGGTTTCTATC+AGG 0.386221 3_2:+77831427 Msa0427130:CDS
GAATGAGTTTGTTGAGTTGC+GGG 0.392966 3_2:-77828521 None:intergenic
TAGGCCCCTTTATGGACTAT+TGG 0.397806 3_2:+77832190 Msa0427130:CDS
TAAAACCATATGTGGCCATC+AGG 0.399543 3_2:-77829711 None:intergenic
AGGGTTATGCTAACTATGTT+AGG 0.399722 3_2:+77834548 Msa0427130:three_prime_UTR
CTTTATATTAAATTCCTTCA+AGG 0.400993 3_2:-77834527 None:intergenic
TGTCAGCCAATAGTCCATAA+AGG 0.405717 3_2:-77832196 None:intergenic
AATGAATCAGCTTGCCTAAA+GGG 0.406259 3_2:-77834130 None:intergenic
AGAGCTTCCAATATTCAAAC+TGG 0.410798 3_2:-77829579 None:intergenic
AGTAAACTTGCTGCCTGTGC+TGG 0.410997 3_2:-77832162 None:intergenic
TGGACAATGTGCGATATTCC+AGG 0.411360 3_2:+77831594 Msa0427130:CDS
TTATACCTTCTCAACTGATT+CGG 0.413865 3_2:-77834045 None:intergenic
TTGTCTCCTAGAGGTTGTAT+TGG 0.415445 3_2:+77831574 Msa0427130:CDS
TTTGCAAATTGCTCCATTGT+TGG 0.415613 3_2:+77831383 Msa0427130:CDS
ACCTCTAGGAGACAAGATAC+TGG 0.420192 3_2:-77831566 None:intergenic
TCTTCATATGGCCAAGGACT+TGG 0.420217 3_2:-77833824 None:intergenic
AGAAAATGAACCCCATGAAT+AGG 0.422344 3_2:-77833857 None:intergenic
TGGTAAGTGACCAATAATTA+TGG 0.422349 3_2:+77834429 Msa0427130:three_prime_UTR
GTCAGCCAATAGTCCATAAA+GGG 0.423028 3_2:-77832195 None:intergenic
AACATGATCTATAAATAATT+GGG 0.428104 3_2:-77834176 None:intergenic
TGCTAACTATGTTAGGCCTC+AGG 0.428657 3_2:+77834555 Msa0427130:three_prime_UTR
ACAAGAAATTTGTGAGTAAA+CGG 0.429095 3_2:-77828395 None:intergenic
TGCCACAACAACCTTGTTGA+CGG 0.432184 3_2:+77831289 Msa0427130:CDS
CATCTGCAAGCAAGGGTGAT+AGG 0.433535 3_2:+77829614 Msa0427130:CDS
ACCTACCAATGCAGATGAAC+TGG 0.435560 3_2:-77833785 None:intergenic
ACTCTAACAAGTGCCCTTGA+AGG 0.448083 3_2:+77834513 Msa0427130:three_prime_UTR
GTTTAACGTCGTTACGTCTG+TGG 0.448334 3_2:+77829666 Msa0427130:CDS
GGCAATGCTTCTTCTAAGCC+AGG 0.448871 3_2:+77833951 Msa0427130:CDS
CCATCAGGGCTTTGTTCACA+AGG 0.466439 3_2:-77829696 None:intergenic
GGACCAGAATAGTCTTCATA+TGG 0.477152 3_2:-77833836 None:intergenic
AAACAATTCCTTAACACAAA+AGG 0.477553 3_2:-77834211 None:intergenic
ACTATTCTGGTCCTATTCAT+GGG 0.478886 3_2:+77833846 Msa0427130:CDS
GAATTGTTTGAGAGGGAGAG+AGG 0.479175 3_2:+77834225 Msa0427130:three_prime_UTR
AATACTAAGCTTTGTATCCC+TGG 0.480739 3_2:-77831612 None:intergenic
TTTAACGTCGTTACGTCTGT+GGG 0.489306 3_2:+77829667 Msa0427130:CDS
AAAGCCCTGATGGCCACATA+TGG 0.489431 3_2:+77829706 Msa0427130:CDS
GCCGTATCATTCCAAGTCCT+TGG 0.491890 3_2:+77833813 Msa0427130:CDS
ATTTAGGAAGATGAGAGGTC+TGG 0.493409 3_2:-77831337 None:intergenic
TGATGTCAGCGTCAATGCTA+AGG 0.502960 3_2:+77831673 Msa0427130:CDS
TGAATGAGTTTGTTGAGTTG+CGG 0.504450 3_2:-77828522 None:intergenic
CAATATGTCATCTGCAAGCA+AGG 0.504642 3_2:+77829606 Msa0427130:exon
AAATGAATCAGCTTGCCTAA+AGG 0.508812 3_2:-77834131 None:intergenic
ACCAAAACTAAAACCATATG+TGG 0.510874 3_2:-77829719 None:intergenic
GATAACTGACTGCATTGTTG+GGG 0.513427 3_2:+77834384 Msa0427130:three_prime_UTR
CTCAGCCAGTTCATCTGCAT+TGG 0.515524 3_2:+77833780 Msa0427130:CDS
GCCAGTTCATCTGCATTGGT+AGG 0.519406 3_2:+77833784 Msa0427130:CDS
TCACATGTTGGAATCTCTGC+TGG 0.521974 3_2:+77834409 Msa0427130:three_prime_UTR
TTTATATTAAATTCCTTCAA+GGG 0.522386 3_2:-77834526 None:intergenic
AATGAGTTTGTTGAGTTGCG+GGG 0.531496 3_2:-77828520 None:intergenic
TACCTTCTCAACTGATTCGG+AGG 0.531786 3_2:-77834042 None:intergenic
CCAATTGAGATGCAAGAAGC+AGG 0.532143 3_2:+77828336 Msa0427130:five_prime_UTR
GACCGTCAACAAGGTTGTTG+TGG 0.536338 3_2:-77831291 None:intergenic
GCAATGCTTCTTCTAAGCCA+GGG 0.536976 3_2:+77833952 Msa0427130:CDS
AGGCATGGCAATTGCAATTG+CGG 0.537999 3_2:+77833914 Msa0427130:CDS
CAACCACGATGCTGCATCAA+GGG 0.538037 3_2:-77829644 None:intergenic
TTGTTTGAGAGGGAGAGAGG+AGG 0.539307 3_2:+77834228 Msa0427130:three_prime_UTR
CCTTGTGAACAAAGCCCTGA+TGG 0.544084 3_2:+77829696 Msa0427130:CDS
AGTTTAATGTGGAACTCTGT+CGG 0.546444 3_2:+77831416 Msa0427130:CDS
ACGGTCGTTCTTAAATCGCT+GGG 0.547332 3_2:+77831308 Msa0427130:CDS
TGTTAAGGAATTGTTTGAGA+GGG 0.555195 3_2:+77834218 Msa0427130:three_prime_UTR
GCCAAGGACTTGGAATGATA+CGG 0.556173 3_2:-77833814 None:intergenic
ACAACCACGATGCTGCATCA+AGG 0.557194 3_2:-77829645 None:intergenic
GGGCCACACTGCACCAGCAC+AGG 0.558002 3_2:+77832149 Msa0427130:CDS
GCTAACTATGTTAGGCCTCA+GGG 0.565015 3_2:+77834556 Msa0427130:three_prime_UTR
TTAAGGAGTTGAATTTAAAG+GGG 0.570688 3_2:-77828481 None:intergenic
ATGCATTCCAGTTAAAGTTG+TGG 0.571311 3_2:-77831264 None:intergenic
TGCAAGCAAGGGTGATAGGA+AGG 0.574166 3_2:+77829618 Msa0427130:CDS
ATGAGTTTGTTGAGTTGCGG+GGG 0.576279 3_2:-77828519 None:intergenic
TTAGTTCCTTCACACATCAC+AGG 0.576709 3_2:+77828640 Msa0427130:five_prime_UTR
CTGTCTTGCACTATCGCAGT+AGG 0.578297 3_2:+77833750 Msa0427130:CDS
CCCAGTATCTTGTCTCCTAG+AGG 0.578526 3_2:+77831565 Msa0427130:CDS
TGAGTTTGTTGAGTTGCGGG+GGG 0.579233 3_2:-77828518 None:intergenic
CCTCTAGGAGACAAGATACT+GGG 0.579558 3_2:-77831565 None:intergenic
CTAAAACAACATGTAGATTG+AGG 0.583168 3_2:-77833893 None:intergenic
GATGTCAGCGTCAATGCTAA+GGG 0.584376 3_2:+77831674 Msa0427130:CDS
TAAGGAGTTGAATTTAAAGG+GGG 0.586132 3_2:-77828480 None:intergenic
ATTGCGGGAATGATTTGGTA+TGG 0.587500 3_2:+77833930 Msa0427130:CDS
GGACAATGTGCGATATTCCA+GGG 0.588944 3_2:+77831595 Msa0427130:CDS
GATCGAAGAAATGTGAGTTG+CGG 0.592494 3_2:-77828428 None:intergenic
AAAACCATATGTGGCCATCA+GGG 0.593172 3_2:-77829710 None:intergenic
TTTAAGAACGACCGTCAACA+AGG 0.599931 3_2:-77831300 None:intergenic
GCAGCAAGTTTACTGCTAGT+AGG 0.603392 3_2:+77832171 Msa0427130:CDS
GCATGAATGTGAGTTTAATG+TGG 0.603505 3_2:+77831405 Msa0427130:CDS
GTCCTCCGAATCAGTTGAGA+AGG 0.604732 3_2:+77834040 Msa0427130:CDS
ACTCACATTCATGCCAACAA+TGG 0.605104 3_2:-77831396 None:intergenic
TCAACTGATTCGGAGGACAC+AGG 0.609341 3_2:-77834035 None:intergenic
GTGTTAAGGAATTGTTTGAG+AGG 0.609813 3_2:+77834217 Msa0427130:three_prime_UTR
GAATAGTCTTCATATGGCCA+AGG 0.611320 3_2:-77833830 None:intergenic
CTGCCTGTGCTGGTGCAGTG+TGG 0.611883 3_2:-77832152 None:intergenic
CATTGTCCAATACAACCTCT+AGG 0.615351 3_2:-77831580 None:intergenic
CTATTCTGGTCCTATTCATG+GGG 0.619940 3_2:+77833847 Msa0427130:CDS
ATAACTGACTGCATTGTTGG+GGG 0.620986 3_2:+77834385 Msa0427130:three_prime_UTR
ATCAGATTTAGGAAGATGAG+AGG 0.631502 3_2:-77831342 None:intergenic
TGGTAGGAAGGGAAAAGCTA+CGG 0.633359 3_2:-77833986 None:intergenic
GAGTTTGTTGAGTTGCGGGG+GGG 0.634087 3_2:-77828517 None:intergenic
AATAATTGGGAATTCCCTCA+AGG 0.634632 3_2:-77834163 None:intergenic
CAATGCTTCTTCTAAGCCAG+GGG 0.639994 3_2:+77833953 Msa0427130:CDS
ACCACAAGTTCAAAAGCGCA+CGG 0.656911 3_2:-77829540 None:intergenic
AACAAACCTGTGATGTGTGA+AGG 0.663637 3_2:-77828646 None:intergenic
AATATGTCATCTGCAAGCAA+GGG 0.670129 3_2:+77829607 Msa0427130:exon
TCAGCCAATAGTCCATAAAG+GGG 0.679688 3_2:-77832194 None:intergenic
TCGAAGAAATGTGAGTTGCG+GGG 0.688360 3_2:-77828426 None:intergenic
CTTCCCTTGATGCAGCATCG+TGG 0.693234 3_2:+77829641 Msa0427130:CDS
TGTGAAGGAACTAAACGACT+CGG 0.699671 3_2:-77828631 None:intergenic
TAAAACACAAGATTATGCTG+CGG 0.731181 3_2:+77834010 Msa0427130:CDS
AATGCTTCTTCTAAGCCAGG+GGG 0.760488 3_2:+77833954 Msa0427130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAAATTATAAACAAATA+AGG - chr3_2:77829087-77829106 None:intergenic 10.0%
!! CTTATTTGTTTATAATTTAA+TGG + chr3_2:77829085-77829104 Msa0427130:intron 10.0%
!!! CGATTTTATTTTTATTTTTT+AGG - chr3_2:77829438-77829457 None:intergenic 10.0%
!! AAGTAAATATATTCATTTAT+AGG + chr3_2:77831844-77831863 Msa0427130:intron 10.0%
!!! ATTTTAAAATGTGATAAATT+GGG + chr3_2:77831923-77831942 Msa0427130:intron 10.0%
!! TAAAGTTATTTATATAACTA+AGG + chr3_2:77832311-77832330 Msa0427130:intron 10.0%
!! GATATACTATTTATAAATTT+AGG - chr3_2:77832554-77832573 None:intergenic 10.0%
!! TTCAAATTAAAAAAATTGAT+GGG - chr3_2:77832673-77832692 None:intergenic 10.0%
!! TTTCAAATTAAAAAAATTGA+TGG - chr3_2:77832674-77832693 None:intergenic 10.0%
!!! AATAAATACTTTCTATTTTA+AGG - chr3_2:77834481-77834500 None:intergenic 10.0%
!!! ATTTTTTTCTTGATTGTAAA+AGG - chr3_2:77829388-77829407 None:intergenic 15.0%
!!! TTATTTTTTAGGAAAAAACA+AGG - chr3_2:77829427-77829446 None:intergenic 15.0%
!! AATAAAAATAAAATCGTTTG+TGG + chr3_2:77829442-77829461 Msa0427130:intron 15.0%
!!! TAGTACTTTATTTTTTTCTT+GGG - chr3_2:77830251-77830270 None:intergenic 15.0%
!! TCAAGTATATTATACTAAAA+AGG - chr3_2:77830336-77830355 None:intergenic 15.0%
!! ATCAACAACTATAAATATAA+TGG - chr3_2:77830716-77830735 None:intergenic 15.0%
!!! GATTTTAAAATGTGATAAAT+TGG + chr3_2:77831922-77831941 Msa0427130:intron 15.0%
!! AACATGATCTATAAATAATT+GGG - chr3_2:77834179-77834198 None:intergenic 15.0%
!! TTTATATTAAATTCCTTCAA+GGG - chr3_2:77834529-77834548 None:intergenic 15.0%
!! TTGAAGGAATTTAATATAAA+GGG + chr3_2:77834529-77834548 Msa0427130:three_prime_UTR 15.0%
!! GTGTAATAATTCACTAATTT+AGG - chr3_2:77828317-77828336 None:intergenic 20.0%
!! TTTAAGGAGTTGAATTTAAA+GGG - chr3_2:77828485-77828504 None:intergenic 20.0%
!!! TTTTAAGGAGTTGAATTTAA+AGG - chr3_2:77828486-77828505 None:intergenic 20.0%
!!! AAATGAAGAGATTTTAGTTT+TGG - chr3_2:77828556-77828575 None:intergenic 20.0%
!!! TATAATTTGTTTTGACTTGA+TGG + chr3_2:77828870-77828889 Msa0427130:intron 20.0%
!!! TTGATTTGATTGTAGTTAAT+TGG + chr3_2:77828957-77828976 Msa0427130:intron 20.0%
!!! TTTGCAATTTTGATACATTT+AGG + chr3_2:77829208-77829227 Msa0427130:intron 20.0%
!!! TTGCAATTTTGATACATTTA+GGG + chr3_2:77829209-77829228 Msa0427130:intron 20.0%
!! TGTTCTTGTATATATGTATA+TGG + chr3_2:77829311-77829330 Msa0427130:intron 20.0%
!! TATATGGATATAAATTGATG+TGG + chr3_2:77829327-77829346 Msa0427130:intron 20.0%
!!! ATGATTTATTTTTTCCATAC+AGG + chr3_2:77829512-77829531 Msa0427130:intron 20.0%
!!! GTAGTACTTTATTTTTTTCT+TGG - chr3_2:77830252-77830271 None:intergenic 20.0%
!! AAGAGAATGAAATAAAATTG+TGG - chr3_2:77830578-77830597 None:intergenic 20.0%
!!! ATATAAACTAAACTTTTCCT+CGG + chr3_2:77830675-77830694 Msa0427130:intron 20.0%
!! ATTATAAGATATAGAAAGTC+AGG - chr3_2:77831232-77831251 None:intergenic 20.0%
!!! AATTTGATGATATCAGATTT+AGG - chr3_2:77831356-77831375 None:intergenic 20.0%
!!! TTAAAATAACTTGTAAGCTT+AGG + chr3_2:77832378-77832397 Msa0427130:intron 20.0%
!!! TAAAATAACTTGTAAGCTTA+GGG + chr3_2:77832379-77832398 Msa0427130:intron 20.0%
!! TACTTTCTTTACTAACATTA+TGG - chr3_2:77832789-77832808 None:intergenic 20.0%
!! TCTAAGTGAATTTAATGATT+TGG - chr3_2:77832876-77832895 None:intergenic 20.0%
!! GTAGATTTATAACAATGTAT+AGG - chr3_2:77833275-77833294 None:intergenic 20.0%
!!! ATTCTCTATATTTTTCAACT+TGG + chr3_2:77833418-77833437 Msa0427130:intron 20.0%
!!! TTCTCTATATTTTTCAACTT+GGG + chr3_2:77833419-77833438 Msa0427130:intron 20.0%
!!! GTTTTAAAGTTGACATAAAT+GGG - chr3_2:77833624-77833643 None:intergenic 20.0%
!!! AGTTTTAAAGTTGACATAAA+TGG - chr3_2:77833625-77833644 None:intergenic 20.0%
!! CAACATGATCTATAAATAAT+TGG - chr3_2:77834180-77834199 None:intergenic 20.0%
!! GTTATTTACACCATAATTAT+TGG - chr3_2:77834442-77834461 None:intergenic 20.0%
!! ATAATTATGGTGTAAATAAC+TGG + chr3_2:77834442-77834461 Msa0427130:three_prime_UTR 20.0%
!!! AAATACTTTCTATTTTAAGG+AGG - chr3_2:77834478-77834497 None:intergenic 20.0%
!! CTTTATATTAAATTCCTTCA+AGG - chr3_2:77834530-77834549 None:intergenic 20.0%
!! CTTGAAGGAATTTAATATAA+AGG + chr3_2:77834528-77834547 Msa0427130:three_prime_UTR 20.0%
! ACAAGAAATTTGTGAGTAAA+CGG - chr3_2:77828398-77828417 None:intergenic 25.0%
! TTAAGGAGTTGAATTTAAAG+GGG - chr3_2:77828484-77828503 None:intergenic 25.0%
! TTGTGAATTAGAGATTTGTA+TGG + chr3_2:77828711-77828730 Msa0427130:intron 25.0%
! TGTATGGTTTCTTAATTCTT+AGG + chr3_2:77828727-77828746 Msa0427130:intron 25.0%
! GTATGGTTTCTTAATTCTTA+GGG + chr3_2:77828728-77828747 Msa0427130:intron 25.0%
!!! TTTTGGATTGTGTTACTTTT+TGG + chr3_2:77828765-77828784 Msa0427130:intron 25.0%
!! AATTTGTAACTTCGTGATTT+TGG + chr3_2:77828824-77828843 Msa0427130:intron 25.0%
!!! GATTATTGCGTTTTATTGAT+TGG + chr3_2:77828931-77828950 Msa0427130:intron 25.0%
!!! CAGATAATTCTTCACTTTTT+TGG - chr3_2:77829035-77829054 None:intergenic 25.0%
!! TTATAAACAAATAAGGCACT+GGG - chr3_2:77829080-77829099 None:intergenic 25.0%
! ATTATAAACAAATAAGGCAC+TGG - chr3_2:77829081-77829100 None:intergenic 25.0%
!! TTTTCTTGATTGTAAAAGGA+CGG - chr3_2:77829384-77829403 None:intergenic 25.0%
! GAAAAATCCAGTTTGAATAT+TGG + chr3_2:77829572-77829591 Msa0427130:five_prime_UTR 25.0%
!!! ATATGGTTTTAGTTTTGGTA+TGG + chr3_2:77829723-77829742 Msa0427130:intron 25.0%
!!! TATGGTTTTAGTTTTGGTAT+GGG + chr3_2:77829724-77829743 Msa0427130:intron 25.0%
! ATCAATAAGAGAGAAAATGA+AGG - chr3_2:77829861-77829880 None:intergenic 25.0%
!!! TTTTTTATCCATGCATTGTT+TGG + chr3_2:77830009-77830028 Msa0427130:intron 25.0%
! GCTCTATAATATTGCTTATA+AGG - chr3_2:77830777-77830796 None:intergenic 25.0%
! CAATTACAAAAAGTTTGTGT+AGG - chr3_2:77830870-77830889 None:intergenic 25.0%
! AGATAAACCACGTTATTATT+TGG - chr3_2:77831150-77831169 None:intergenic 25.0%
! GTTTCTATCAGGTAAAATTT+GGG + chr3_2:77831438-77831457 Msa0427130:intron 25.0%
! TCTGACAATTTCATTTCAAA+AGG - chr3_2:77831526-77831545 None:intergenic 25.0%
! TACAAAGCTTAGTATTATCT+TGG + chr3_2:77831619-77831638 Msa0427130:CDS 25.0%
!!! TATTGGATCATTTAACTTGT+TGG + chr3_2:77832128-77832147 Msa0427130:CDS 25.0%
!!! ATTGGATCATTTAACTTGTT+GGG + chr3_2:77832129-77832148 Msa0427130:CDS 25.0%
! GAATTAGTTAAGCTTAAACT+AGG - chr3_2:77832472-77832491 None:intergenic 25.0%
!!! AATAATTATGTCCACTTTTC+AGG - chr3_2:77832814-77832833 None:intergenic 25.0%
!! CATAAAATGCAAGTGTTTTT+AGG - chr3_2:77832960-77832979 None:intergenic 25.0%
! ACCTTCCAGAAATTATATAT+GGG - chr3_2:77833144-77833163 None:intergenic 25.0%
! AACCTTCCAGAAATTATATA+TGG - chr3_2:77833145-77833164 None:intergenic 25.0%
! CGTATACTACTAAATATATC+TGG - chr3_2:77833246-77833265 None:intergenic 25.0%
! AGTACATACTAAATTTGTGT+GGG + chr3_2:77833346-77833365 Msa0427130:intron 25.0%
! TACTAGAACTTTACTAGATA+TGG - chr3_2:77833395-77833414 None:intergenic 25.0%
! TAGAAACACAATTTATTCTG+TGG + chr3_2:77833477-77833496 Msa0427130:intron 25.0%
!!! TTCATTTTCTTTGGAAAAGA+GGG + chr3_2:77833870-77833889 Msa0427130:CDS 25.0%
!! AGTTGAGAAGGTATAAAAAT+AGG + chr3_2:77834052-77834071 Msa0427130:exon 25.0%
! TAAAAATAGGCTTACAAGAA+AGG + chr3_2:77834065-77834084 Msa0427130:exon 25.0%
!! AAAGGAAGTGATTAAACTTT+TGG + chr3_2:77834083-77834102 Msa0427130:three_prime_UTR 25.0%
!! TCATTTTCTTTTATACCTTG+AGG + chr3_2:77834148-77834167 Msa0427130:three_prime_UTR 25.0%
!! CATTTTCTTTTATACCTTGA+GGG + chr3_2:77834149-77834168 Msa0427130:three_prime_UTR 25.0%
! AAACAATTCCTTAACACAAA+AGG - chr3_2:77834214-77834233 None:intergenic 25.0%
!!! TTATTCCATTTTTGTCTTCA+TGG + chr3_2:77834335-77834354 Msa0427130:three_prime_UTR 25.0%
TAAGGAGTTGAATTTAAAGG+GGG - chr3_2:77828483-77828502 None:intergenic 30.0%
CACGAAAAAACTTCAAGAAT+CGG - chr3_2:77828675-77828694 None:intergenic 30.0%
! TGATGAAAATTGTGCTATTC+TGG + chr3_2:77828896-77828915 Msa0427130:intron 30.0%
!! TATAAACAAATAAGGCACTG+GGG - chr3_2:77829079-77829098 None:intergenic 30.0%
! TTCTCAAATGTGTTTTTCGT+TGG - chr3_2:77829121-77829140 None:intergenic 30.0%
CTAATTTGACTACGTCAAAT+AGG + chr3_2:77829141-77829160 Msa0427130:intron 30.0%
GTCTCATTTATTAGTCATGT+TGG - chr3_2:77829175-77829194 None:intergenic 30.0%
ACTAATAAATGAGACACTTG+TGG + chr3_2:77829180-77829199 Msa0427130:intron 30.0%
TACAAGAACATTGTGAACAA+AGG - chr3_2:77829301-77829320 None:intergenic 30.0%
TGATGTGGTCTAATTGTTTA+TGG + chr3_2:77829342-77829361 Msa0427130:intron 30.0%
TTTCTTGATTGTAAAAGGAC+GGG - chr3_2:77829383-77829402 None:intergenic 30.0%
AAATAAAATCGTTTGTGGAG+TGG + chr3_2:77829447-77829466 Msa0427130:intron 30.0%
AATAAAATCGTTTGTGGAGT+GGG + chr3_2:77829448-77829467 Msa0427130:intron 30.0%
! ATTCAAACTGGATTTTTCAC+TGG - chr3_2:77829570-77829589 None:intergenic 30.0%
ACCAAAACTAAAACCATATG+TGG - chr3_2:77829722-77829741 None:intergenic 30.0%
! AACCTTTTTGTGACAACTTT+TGG + chr3_2:77829830-77829849 Msa0427130:intron 30.0%
! ACCTTTTTGTGACAACTTTT+GGG + chr3_2:77829831-77829850 Msa0427130:intron 30.0%
AGAGAGAAAAATGAAGAAAG+AGG + chr3_2:77829893-77829912 Msa0427130:intron 30.0%
GAGAGAAAAATGAAGAAAGA+GGG + chr3_2:77829894-77829913 Msa0427130:intron 30.0%
CTTTATATCCAAACAATGCA+TGG - chr3_2:77830020-77830039 None:intergenic 30.0%
GTACTAATTTCAACCAACAA+TGG + chr3_2:77830039-77830058 Msa0427130:intron 30.0%
AATTTCAACCAACAATGGAT+TGG + chr3_2:77830044-77830063 Msa0427130:intron 30.0%
TCACGTGTATGGATAAAATT+CGG + chr3_2:77830125-77830144 Msa0427130:intron 30.0%
TGTATGGATAAAATTCGGTT+GGG + chr3_2:77830130-77830149 Msa0427130:intron 30.0%
AAAACTTCGTACCAATATCA+TGG + chr3_2:77830222-77830241 Msa0427130:intron 30.0%
! TACTTTTGTGCTTTCCTTTT+TGG + chr3_2:77830269-77830288 Msa0427130:intron 30.0%
ATGCATGTATCATACCAAAA+AGG - chr3_2:77830286-77830305 None:intergenic 30.0%
! TGTATTCGTTTTGTGGAAAA+AGG + chr3_2:77830305-77830324 Msa0427130:intron 30.0%
CTTACTCTATAATAACCTGA+TGG + chr3_2:77830449-77830468 Msa0427130:intron 30.0%
!! TATCAAATTTCTAGTCCATC+AGG - chr3_2:77830467-77830486 None:intergenic 30.0%
CACGTAGAAAATATCCTAAA+GGG + chr3_2:77830495-77830514 Msa0427130:intron 30.0%
!! TAGTTGTTGATAATGCCAAT+AGG + chr3_2:77830725-77830744 Msa0427130:intron 30.0%
!! AGTTGTTGATAATGCCAATA+GGG + chr3_2:77830726-77830745 Msa0427130:intron 30.0%
ATAATGCCAATAGGGAAAAT+TGG + chr3_2:77830734-77830753 Msa0427130:intron 30.0%
ATGTTCAATCCAAAAATCTG+AGG + chr3_2:77830892-77830911 Msa0427130:intron 30.0%
TGTTCAATCCAAAAATCTGA+GGG + chr3_2:77830893-77830912 Msa0427130:intron 30.0%
! TGATATCACAACAAACCTTT+TGG - chr3_2:77830941-77830960 None:intergenic 30.0%
! TTTGTTGTGATATCAGAGAT+AGG + chr3_2:77830946-77830965 Msa0427130:intron 30.0%
! TTGAAGCAACTTGTGATTTT+TGG + chr3_2:77830997-77831016 Msa0427130:intron 30.0%
AACCACGTTATTATTTGGTT+GGG - chr3_2:77831145-77831164 None:intergenic 30.0%
AAACCACGTTATTATTTGGT+TGG - chr3_2:77831146-77831165 None:intergenic 30.0%
AAGTCAGGAATTTAGCATTT+CGG - chr3_2:77831217-77831236 None:intergenic 30.0%
GGTTTCTATCAGGTAAAATT+TGG + chr3_2:77831437-77831456 Msa0427130:intron 30.0%
! GCTTAGTATTATCTTGGTTT+TGG + chr3_2:77831625-77831644 Msa0427130:CDS 30.0%
TATCAAACCTGAATCTTAGT+TGG + chr3_2:77831770-77831789 Msa0427130:intron 30.0%
ATCAAACCTGAATCTTAGTT+GGG + chr3_2:77831771-77831790 Msa0427130:intron 30.0%
!! ACAGGAAAGTTTGTTGAAAA+AGG - chr3_2:77831952-77831971 None:intergenic 30.0%
AAGACTGCTTATGATGAAAA+TGG - chr3_2:77831981-77832000 None:intergenic 30.0%
CTTCAGAGGAAATATTCTAT+TGG + chr3_2:77832111-77832130 Msa0427130:CDS 30.0%
AGAAATAGAGAAACTTACAG+TGG - chr3_2:77832259-77832278 None:intergenic 30.0%
TTCTTCACCTATGAAAGAAA+GGG - chr3_2:77832346-77832365 None:intergenic 30.0%
ATTCTTCACCTATGAAAGAA+AGG - chr3_2:77832347-77832366 None:intergenic 30.0%
TTACAAATTGAAAACCGAGT+CGG - chr3_2:77832509-77832528 None:intergenic 30.0%
ATTCAAAAGTCCAAATTTGC+TGG + chr3_2:77832576-77832595 Msa0427130:intron 30.0%
! AAAAAATTGATGGGCATGAA+TGG - chr3_2:77832664-77832683 None:intergenic 30.0%
CAAATGTAGAGAATTCTCTA+CGG + chr3_2:77832744-77832763 Msa0427130:intron 30.0%
AAGAAAGTAATCCTGAAAAG+TGG + chr3_2:77832800-77832819 Msa0427130:intron 30.0%
TCACACTACTTCAATTAGAT+TGG - chr3_2:77832902-77832921 None:intergenic 30.0%
TTCCAGAAATTATATATGGG+GGG - chr3_2:77833141-77833160 None:intergenic 30.0%
CTTCCAGAAATTATATATGG+GGG - chr3_2:77833142-77833161 None:intergenic 30.0%
CCTTCCAGAAATTATATATG+GGG - chr3_2:77833143-77833162 None:intergenic 30.0%
AATCATTGTAGAAGCAGAAT+TGG - chr3_2:77833191-77833210 None:intergenic 30.0%
CAGTACATACTAAATTTGTG+TGG + chr3_2:77833345-77833364 Msa0427130:intron 30.0%
! CTTTACTAGATATGGTTCTA+AGG - chr3_2:77833387-77833406 None:intergenic 30.0%
AAAAATGAGTGTTTGTCCTA+TGG - chr3_2:77833457-77833476 None:intergenic 30.0%
TGACATTCACCTTAGAAAAA+AGG + chr3_2:77833579-77833598 Msa0427130:intron 30.0%
GACATTCACCTTAGAAAAAA+GGG + chr3_2:77833580-77833599 Msa0427130:intron 30.0%
!!! ATGGTTGTTTTTATGAGTGA+AGG - chr3_2:77833658-77833677 None:intergenic 30.0%
AACAGTCAAAACAGTAATCA+TGG - chr3_2:77833677-77833696 None:intergenic 30.0%
!!! ATGATTACTGTTTTGACTGT+TGG + chr3_2:77833676-77833695 Msa0427130:intron 30.0%
!! GTTCATTTTCTTTGGAAAAG+AGG + chr3_2:77833869-77833888 Msa0427130:CDS 30.0%
CTAAAACAACATGTAGATTG+AGG - chr3_2:77833896-77833915 None:intergenic 30.0%
!!! CTCAATCTACATGTTGTTTT+AGG + chr3_2:77833894-77833913 Msa0427130:CDS 30.0%
! TAATCTTGTGTTTTACTGGT+AGG - chr3_2:77834005-77834024 None:intergenic 30.0%
! AGCATAATCTTGTGTTTTAC+TGG - chr3_2:77834009-77834028 None:intergenic 30.0%
TAAAACACAAGATTATGCTG+CGG + chr3_2:77834010-77834029 Msa0427130:CDS 30.0%
TTATACCTTCTCAACTGATT+CGG - chr3_2:77834048-77834067 None:intergenic 30.0%
TGTTAAGGAATTGTTTGAGA+GGG + chr3_2:77834218-77834237 Msa0427130:three_prime_UTR 30.0%
!!! ACAACTCTTATTTTGGAAGA+GGG + chr3_2:77834251-77834270 Msa0427130:three_prime_UTR 30.0%
TGGTAAGTGACCAATAATTA+TGG + chr3_2:77834429-77834448 Msa0427130:three_prime_UTR 30.0%
ATTTCTTCGATCTCTGAATC+TGG + chr3_2:77828439-77828458 Msa0427130:five_prime_UTR 35.0%
!! TGAATGAGTTTGTTGAGTTG+CGG - chr3_2:77828525-77828544 None:intergenic 35.0%
TTCTTAATTCTTAGGGATCG+TGG + chr3_2:77828735-77828754 Msa0427130:intron 35.0%
TTCTTGATTGTAAAAGGACG+GGG - chr3_2:77829382-77829401 None:intergenic 35.0%
AGAGCTTCCAATATTCAAAC+TGG - chr3_2:77829582-77829601 None:intergenic 35.0%
AATATGTCATCTGCAAGCAA+GGG + chr3_2:77829607-77829626 Msa0427130:exon 35.0%
!!! GCCACATATGGTTTTAGTTT+TGG + chr3_2:77829718-77829737 Msa0427130:CDS 35.0%
TTCAAAAGCGGGTAAGAAAA+TGG - chr3_2:77829762-77829781 None:intergenic 35.0%
AACCAACCAAGATTCAAAAG+CGG - chr3_2:77829774-77829793 None:intergenic 35.0%
TCCCAAAAGTTGTCACAAAA+AGG - chr3_2:77829835-77829854 None:intergenic 35.0%
CAATGAGAATATGAGAGAGA+CGG + chr3_2:77829925-77829944 Msa0427130:intron 35.0%
! AACCATTTTGTGACAACCTT+TGG - chr3_2:77829955-77829974 None:intergenic 35.0%
GTGTATGGATAAAATTCGGT+TGG + chr3_2:77830129-77830148 Msa0427130:intron 35.0%
TTCTTGGGTTACCATGATAT+TGG - chr3_2:77830236-77830255 None:intergenic 35.0%
! ACATGCATGTATTCGTTTTG+TGG + chr3_2:77830298-77830317 Msa0427130:intron 35.0%
!!! CCTTTAGGATATTTTCTACG+TGG - chr3_2:77830497-77830516 None:intergenic 35.0%
CCACGTAGAAAATATCCTAA+AGG + chr3_2:77830494-77830513 Msa0427130:intron 35.0%
GTAGAAAATATCCTAAAGGG+TGG + chr3_2:77830498-77830517 Msa0427130:intron 35.0%
TGTATCAAATACCACCCTTT+AGG - chr3_2:77830512-77830531 None:intergenic 35.0%
GTGGTATTTGATACAGTTGT+TGG + chr3_2:77830517-77830536 Msa0427130:intron 35.0%
GTATTTGATACAGTTGTTGG+TGG + chr3_2:77830520-77830539 Msa0427130:intron 35.0%
! TCAATGCCAATTTTCCCTAT+TGG - chr3_2:77830743-77830762 None:intergenic 35.0%
GAAAGAAATACCTGAGAAGA+AGG + chr3_2:77830811-77830830 Msa0427130:intron 35.0%
!! TCACAACAAACCTTTTGGAA+CGG - chr3_2:77830936-77830955 None:intergenic 35.0%
! TTTAAAACTGCAGTAGCTGT+GGG - chr3_2:77831066-77831085 None:intergenic 35.0%
!!! GCTACTGCAGTTTTAAAGTA+CGG + chr3_2:77831069-77831088 Msa0427130:intron 35.0%
TACCCAACCAAATAATAACG+TGG + chr3_2:77831140-77831159 Msa0427130:intron 35.0%
ATGCATTCCAGTTAAAGTTG+TGG - chr3_2:77831267-77831286 None:intergenic 35.0%
ATCAGATTTAGGAAGATGAG+AGG - chr3_2:77831345-77831364 None:intergenic 35.0%
TTTGCAAATTGCTCCATTGT+TGG + chr3_2:77831383-77831402 Msa0427130:CDS 35.0%
GCATGAATGTGAGTTTAATG+TGG + chr3_2:77831405-77831424 Msa0427130:CDS 35.0%
AGTTTAATGTGGAACTCTGT+CGG + chr3_2:77831416-77831435 Msa0427130:CDS 35.0%
! TCAGGTAAAATTTGGGCTTT+TGG + chr3_2:77831445-77831464 Msa0427130:intron 35.0%
! AATACTAAGCTTTGTATCCC+TGG - chr3_2:77831615-77831634 None:intergenic 35.0%
!!! AGTATTATCTTGGTTTTGGC+TGG + chr3_2:77831629-77831648 Msa0427130:CDS 35.0%
! ATTTGATTTCCATGTCACCA+AGG + chr3_2:77831810-77831829 Msa0427130:intron 35.0%
TTACTTATCTTGAACAGCCT+TGG - chr3_2:77831830-77831849 None:intergenic 35.0%
TGATGAAAATGGAGAGAAAC+AGG - chr3_2:77831970-77831989 None:intergenic 35.0%
!! GAACTCTTCCTCTTTTGTTT+GGG + chr3_2:77832023-77832042 Msa0427130:intron 35.0%
! AGTATGTGCATTTTCTTCAG+AGG + chr3_2:77832097-77832116 Msa0427130:intron 35.0%
AATATTGAGAATTGATCCCC+AGG + chr3_2:77832436-77832455 Msa0427130:intron 35.0%
AACTAGGCTATAGTAAACCT+GGG - chr3_2:77832456-77832475 None:intergenic 35.0%
AAACTAGGCTATAGTAAACC+TGG - chr3_2:77832457-77832476 None:intergenic 35.0%
! CTGTAAGTAGCATTTGAAGT+AGG + chr3_2:77832614-77832633 Msa0427130:intron 35.0%
CCTCTTCAAAGAGACTTAAA+AGG - chr3_2:77832707-77832726 None:intergenic 35.0%
!! CCTTTTAAGTCTCTTTGAAG+AGG + chr3_2:77832704-77832723 Msa0427130:intron 35.0%
! TTTAAGTCTCTTTGAAGAGG+TGG + chr3_2:77832707-77832726 Msa0427130:intron 35.0%
TTGTATAAACCTGTACTGCT+TGG + chr3_2:77832842-77832861 Msa0427130:intron 35.0%
TGTATAAACCTGTACTGCTT+GGG + chr3_2:77832843-77832862 Msa0427130:intron 35.0%
!!! CAAGTGTTTTTAGGCTAGAT+TGG - chr3_2:77832951-77832970 None:intergenic 35.0%
CTAAGAACGTAAGATCTATG+AGG + chr3_2:77832992-77833011 Msa0427130:intron 35.0%
GTTATCATGCTCAAATCTAG+TGG + chr3_2:77833019-77833038 Msa0427130:intron 35.0%
CTAAGTAAAATCTTCATCGC+AGG - chr3_2:77833082-77833101 None:intergenic 35.0%
! CCCCATATATAATTTCTGGA+AGG + chr3_2:77833140-77833159 Msa0427130:intron 35.0%
TGCTTCTACAATGATTTCCT+GGG + chr3_2:77833195-77833214 Msa0427130:intron 35.0%
! TCATTTTCAGAGAGAGAAAC+AGG - chr3_2:77833556-77833575 None:intergenic 35.0%
ATTCACCTTAGAAAAAAGGG+AGG + chr3_2:77833583-77833602 Msa0427130:intron 35.0%
CATAAATGGGTATGCGTATT+TGG - chr3_2:77833611-77833630 None:intergenic 35.0%
ACTATTCTGGTCCTATTCAT+GGG + chr3_2:77833846-77833865 Msa0427130:CDS 35.0%
AGAAAATGAACCCCATGAAT+AGG - chr3_2:77833860-77833879 None:intergenic 35.0%
! TTCATGGGGTTCATTTTCTT+TGG + chr3_2:77833861-77833880 Msa0427130:CDS 35.0%
!!! TCTACATGTTGTTTTAGGCA+TGG + chr3_2:77833899-77833918 Msa0427130:CDS 35.0%
! TTGTGTTTTACTGGTAGGAA+GGG - chr3_2:77834000-77834019 None:intergenic 35.0%
! AAACTTTTGGTGAAGTGCAT+AGG + chr3_2:77834096-77834115 Msa0427130:three_prime_UTR 35.0%
AATGAATCAGCTTGCCTAAA+GGG - chr3_2:77834133-77834152 None:intergenic 35.0%
AAATGAATCAGCTTGCCTAA+AGG - chr3_2:77834134-77834153 None:intergenic 35.0%
AATAATTGGGAATTCCCTCA+AGG - chr3_2:77834166-77834185 None:intergenic 35.0%
! TATCTCTGCCTTTTGTGTTA+AGG + chr3_2:77834203-77834222 Msa0427130:three_prime_UTR 35.0%
GTGTTAAGGAATTGTTTGAG+AGG + chr3_2:77834217-77834236 Msa0427130:three_prime_UTR 35.0%
!!! GACAACTCTTATTTTGGAAG+AGG + chr3_2:77834250-77834269 Msa0427130:three_prime_UTR 35.0%
GCTAACCATGAAGACAAAAA+TGG - chr3_2:77834343-77834362 None:intergenic 35.0%
TGATAACTGACTGCATTGTT+GGG + chr3_2:77834383-77834402 Msa0427130:three_prime_UTR 35.0%
AGGGTTATGCTAACTATGTT+AGG + chr3_2:77834548-77834567 Msa0427130:three_prime_UTR 35.0%
ATCGAAGAAATGTGAGTTGC+GGG - chr3_2:77828430-77828449 None:intergenic 40.0%
GATCGAAGAAATGTGAGTTG+CGG - chr3_2:77828431-77828450 None:intergenic 40.0%
!!! GGGGTTTGAGTTTGGTTTTA+AGG - chr3_2:77828501-77828520 None:intergenic 40.0%
!! AATGAGTTTGTTGAGTTGCG+GGG - chr3_2:77828523-77828542 None:intergenic 40.0%
!! GAATGAGTTTGTTGAGTTGC+GGG - chr3_2:77828524-77828543 None:intergenic 40.0%
TGTGAAGGAACTAAACGACT+CGG - chr3_2:77828634-77828653 None:intergenic 40.0%
TTAGTTCCTTCACACATCAC+AGG + chr3_2:77828640-77828659 Msa0427130:five_prime_UTR 40.0%
AACAAACCTGTGATGTGTGA+AGG - chr3_2:77828649-77828668 None:intergenic 40.0%
! TTTTAGTCCTTGAATGTGCG+AGG - chr3_2:77829250-77829269 None:intergenic 40.0%
CAATATGTCATCTGCAAGCA+AGG + chr3_2:77829606-77829625 Msa0427130:exon 40.0%
TTTAACGTCGTTACGTCTGT+GGG + chr3_2:77829667-77829686 Msa0427130:CDS 40.0%
AAAACCATATGTGGCCATCA+GGG - chr3_2:77829713-77829732 None:intergenic 40.0%
TAAAACCATATGTGGCCATC+AGG - chr3_2:77829714-77829733 None:intergenic 40.0%
!! TCTTACCCGCTTTTGAATCT+TGG + chr3_2:77829765-77829784 Msa0427130:intron 40.0%
ACCAACCAAGATTCAAAAGC+GGG - chr3_2:77829773-77829792 None:intergenic 40.0%
GTCCAAAGGTTGTCACAAAA+TGG + chr3_2:77829950-77829969 Msa0427130:intron 40.0%
ATGGATAAAATTCGGTTGGG+AGG + chr3_2:77830133-77830152 Msa0427130:intron 40.0%
TGGATAAAATTCGGTTGGGA+GGG + chr3_2:77830134-77830153 Msa0427130:intron 40.0%
AGCTTTGCTTGCATTACCTT+TGG + chr3_2:77830408-77830427 Msa0427130:intron 40.0%
GCTTTGCTTGCATTACCTTT+GGG + chr3_2:77830409-77830428 Msa0427130:intron 40.0%
CTTTGCTTGCATTACCTTTG+GGG + chr3_2:77830410-77830429 Msa0427130:intron 40.0%
!! GGATGCATTTTTCAAATCCG+AGG - chr3_2:77830695-77830714 None:intergenic 40.0%
! GCACATTTCCCTCAGATTTT+TGG - chr3_2:77830904-77830923 None:intergenic 40.0%
!!! CGATTTTTTCCCGTTCCAAA+AGG + chr3_2:77830923-77830942 Msa0427130:intron 40.0%
!!! CACAACAAACCTTTTGGAAC+GGG - chr3_2:77830935-77830954 None:intergenic 40.0%
! AGGCATTTAGACTTTTCGCT+AGG + chr3_2:77830966-77830985 Msa0427130:intron 40.0%
!! CTTTAAAACTGCAGTAGCTG+TGG - chr3_2:77831067-77831086 None:intergenic 40.0%
TATGCAGCCACAACTTTAAC+TGG + chr3_2:77831257-77831276 Msa0427130:intron 40.0%
TTTAAGAACGACCGTCAACA+AGG - chr3_2:77831303-77831322 None:intergenic 40.0%
ATTTAGGAAGATGAGAGGTC+TGG - chr3_2:77831340-77831359 None:intergenic 40.0%
ACTCACATTCATGCCAACAA+TGG - chr3_2:77831399-77831418 None:intergenic 40.0%
TTGTCTCCTAGAGGTTGTAT+TGG + chr3_2:77831574-77831593 Msa0427130:CDS 40.0%
CATTGTCCAATACAACCTCT+AGG - chr3_2:77831583-77831602 None:intergenic 40.0%
CTATCTCCCAACTAAGATTC+AGG - chr3_2:77831780-77831799 None:intergenic 40.0%
! CGAACTCTTCCTCTTTTGTT+TGG + chr3_2:77832022-77832041 Msa0427130:intron 40.0%
TCAGCCAATAGTCCATAAAG+GGG - chr3_2:77832197-77832216 None:intergenic 40.0%
GTCAGCCAATAGTCCATAAA+GGG - chr3_2:77832198-77832217 None:intergenic 40.0%
TGTCAGCCAATAGTCCATAA+AGG - chr3_2:77832199-77832218 None:intergenic 40.0%
TAGACTGCCCTTTCTTTCAT+AGG + chr3_2:77832336-77832355 Msa0427130:intron 40.0%
ACTAGGCTATAGTAAACCTG+GGG - chr3_2:77832455-77832474 None:intergenic 40.0%
!! TCCAAATTTGCTGGTTGTCT+AGG + chr3_2:77832585-77832604 Msa0427130:intron 40.0%
TCCTAGACAACCAGCAAATT+TGG - chr3_2:77832589-77832608 None:intergenic 40.0%
AACGTAAGATCTATGAGGTC+TGG + chr3_2:77832997-77833016 Msa0427130:intron 40.0%
CTCCCCCCATATATAATTTC+TGG + chr3_2:77833136-77833155 Msa0427130:intron 40.0%
GAAGCAGAATTGGCAAATCA+GGG - chr3_2:77833181-77833200 None:intergenic 40.0%
AGAAGCAGAATTGGCAAATC+AGG - chr3_2:77833182-77833201 None:intergenic 40.0%
CTGCTTCTACAATGATTTCC+TGG + chr3_2:77833194-77833213 Msa0427130:intron 40.0%
GCTTCTACAATGATTTCCTG+GGG + chr3_2:77833196-77833215 Msa0427130:intron 40.0%
!! TTCTAAGGTATGCCAAGGAT+GGG - chr3_2:77833372-77833391 None:intergenic 40.0%
!! TATGGTTCTAAGGTATGCCA+AGG - chr3_2:77833377-77833396 None:intergenic 40.0%
TTTGTCCTATGGCAAAGGAT+AGG - chr3_2:77833446-77833465 None:intergenic 40.0%
GAGAAACTGTTTACTGTGCA+TGG + chr3_2:77833501-77833520 Msa0427130:intron 40.0%
!!! TGGATCCTCCCTTTTTTCTA+AGG - chr3_2:77833591-77833610 None:intergenic 40.0%
TTATTAAGCTGATCTGCTCC+TGG + chr3_2:77833706-77833725 Msa0427130:intron 40.0%
! CATCTGCATTGGTAGGTTTA+CGG + chr3_2:77833791-77833810 Msa0427130:CDS 40.0%
GAATAGTCTTCATATGGCCA+AGG - chr3_2:77833833-77833852 None:intergenic 40.0%
TGGCCATATGAAGACTATTC+TGG + chr3_2:77833833-77833852 Msa0427130:CDS 40.0%
GGACCAGAATAGTCTTCATA+TGG - chr3_2:77833839-77833858 None:intergenic 40.0%
GACTATTCTGGTCCTATTCA+TGG + chr3_2:77833845-77833864 Msa0427130:CDS 40.0%
CTATTCTGGTCCTATTCATG+GGG + chr3_2:77833847-77833866 Msa0427130:CDS 40.0%
TTGCAATTGCGGGAATGATT+TGG + chr3_2:77833925-77833944 Msa0427130:CDS 40.0%
!! ATTGCGGGAATGATTTGGTA+TGG + chr3_2:77833930-77833949 Msa0427130:CDS 40.0%
! CTTGTGTTTTACTGGTAGGA+AGG - chr3_2:77834001-77834020 None:intergenic 40.0%
!! GAGGAGGACAACTCTTATTT+TGG + chr3_2:77834244-77834263 Msa0427130:three_prime_UTR 40.0%
CTGATAACTGACTGCATTGT+TGG + chr3_2:77834382-77834401 Msa0427130:three_prime_UTR 40.0%
GATAACTGACTGCATTGTTG+GGG + chr3_2:77834384-77834403 Msa0427130:three_prime_UTR 40.0%
ATAACTGACTGCATTGTTGG+GGG + chr3_2:77834385-77834404 Msa0427130:three_prime_UTR 40.0%
CCTGCTTCTTGCATCTCAAT+TGG - chr3_2:77828339-77828358 None:intergenic 45.0%
CCAATTGAGATGCAAGAAGC+AGG + chr3_2:77828336-77828355 Msa0427130:five_prime_UTR 45.0%
TCGAAGAAATGTGAGTTGCG+GGG - chr3_2:77828429-77828448 None:intergenic 45.0%
!! ATGAGTTTGTTGAGTTGCGG+GGG - chr3_2:77828522-77828541 None:intergenic 45.0%
CATTTAGGGACCATAGTGAC+AGG + chr3_2:77829223-77829242 Msa0427130:intron 45.0%
AAATCGTTTGTGGAGTGGGT+TGG + chr3_2:77829452-77829471 Msa0427130:intron 45.0%
! AATCGTTTGTGGAGTGGGTT+GGG + chr3_2:77829453-77829472 Msa0427130:intron 45.0%
! ACCACAAGTTCAAAAGCGCA+CGG - chr3_2:77829543-77829562 None:intergenic 45.0%
GTTTAACGTCGTTACGTCTG+TGG + chr3_2:77829666-77829685 Msa0427130:CDS 45.0%
!! ACCCGCTTTTGAATCTTGGT+TGG + chr3_2:77829769-77829788 Msa0427130:intron 45.0%
CACTTGGACCAATCCATTGT+TGG - chr3_2:77830055-77830074 None:intergenic 45.0%
!! CAACAATGGATTGGTCCAAG+TGG + chr3_2:77830053-77830072 Msa0427130:intron 45.0%
!! ATGGATTGGTCCAAGTGGTA+AGG + chr3_2:77830058-77830077 Msa0427130:intron 45.0%
!! TGGATTGGTCCAAGTGGTAA+GGG + chr3_2:77830059-77830078 Msa0427130:intron 45.0%
AACCCCTTAAGCATGTGATC+AGG + chr3_2:77830087-77830106 Msa0427130:intron 45.0%
ACCCCTTAAGCATGTGATCA+GGG + chr3_2:77830088-77830107 Msa0427130:intron 45.0%
ACCCCTGATCACATGCTTAA+GGG - chr3_2:77830093-77830112 None:intergenic 45.0%
AACCCCTGATCACATGCTTA+AGG - chr3_2:77830094-77830113 None:intergenic 45.0%
TTTATCCATACACGTGAGCC+AGG - chr3_2:77830122-77830141 None:intergenic 45.0%
GGATAAAATTCGGTTGGGAG+GGG + chr3_2:77830135-77830154 Msa0427130:intron 45.0%
GATAAAATTCGGTTGGGAGG+GGG + chr3_2:77830136-77830155 Msa0427130:intron 45.0%
TAGCAGTGACTAATCTCCGT+CGG - chr3_2:77830192-77830211 None:intergenic 45.0%
! GATTAGTCACTGCTAAGCAG+CGG + chr3_2:77830197-77830216 Msa0427130:intron 45.0%
! GCTGTCGATTGTACTGTATC+TGG + chr3_2:77830633-77830652 Msa0427130:intron 45.0%
TGCTAGCATACCTTCTTCTC+AGG - chr3_2:77830824-77830843 None:intergenic 45.0%
TGCCACAACAACCTTGTTGA+CGG + chr3_2:77831289-77831308 Msa0427130:CDS 45.0%
ACGGTCGTTCTTAAATCGCT+GGG + chr3_2:77831308-77831327 Msa0427130:CDS 45.0%
!! GAACTCTGTCGGTTTCTATC+AGG + chr3_2:77831427-77831446 Msa0427130:CDS 45.0%
! CCTCTAGGAGACAAGATACT+GGG - chr3_2:77831568-77831587 None:intergenic 45.0%
! ACCTCTAGGAGACAAGATAC+TGG - chr3_2:77831569-77831588 None:intergenic 45.0%
TGGACAATGTGCGATATTCC+AGG + chr3_2:77831594-77831613 Msa0427130:CDS 45.0%
GGACAATGTGCGATATTCCA+GGG + chr3_2:77831595-77831614 Msa0427130:CDS 45.0%
TGATGTCAGCGTCAATGCTA+AGG + chr3_2:77831673-77831692 Msa0427130:CDS 45.0%
GATGTCAGCGTCAATGCTAA+GGG + chr3_2:77831674-77831693 Msa0427130:CDS 45.0%
ACGAGAAGCCCAAACAAAAG+AGG - chr3_2:77832034-77832053 None:intergenic 45.0%
!! TCTCGTGCTCTAGGTTTTAC+AGG + chr3_2:77832048-77832067 Msa0427130:intron 45.0%
!! CTCGTGCTCTAGGTTTTACA+GGG + chr3_2:77832049-77832068 Msa0427130:intron 45.0%
GCAGCAAGTTTACTGCTAGT+AGG + chr3_2:77832171-77832190 Msa0427130:CDS 45.0%
! TAGGCCCCTTTATGGACTAT+TGG + chr3_2:77832190-77832209 Msa0427130:CDS 45.0%
CACGCAAGCACACATTATAC+AGG - chr3_2:77832411-77832430 None:intergenic 45.0%
CTGTATAATGTGTGCTTGCG+TGG + chr3_2:77832409-77832428 Msa0427130:intron 45.0%
ACACTACTTCACAACCGACT+CGG + chr3_2:77832492-77832511 Msa0427130:intron 45.0%
GGGCATGAATGGAAGTTAAC+TGG - chr3_2:77832653-77832672 None:intergenic 45.0%
! AAGTCTCTTTGAAGAGGTGG+AGG + chr3_2:77832710-77832729 Msa0427130:intron 45.0%
! ATTATATATGGGGGGAGCAC+AGG - chr3_2:77833133-77833152 None:intergenic 45.0%
TCATGCAACATCATAACCCC+AGG - chr3_2:77833215-77833234 None:intergenic 45.0%
!! GTTCTAAGGTATGCCAAGGA+TGG - chr3_2:77833373-77833392 None:intergenic 45.0%
GAGTGTTTGTCCTATGGCAA+AGG - chr3_2:77833451-77833470 None:intergenic 45.0%
ACCTACCAATGCAGATGAAC+TGG - chr3_2:77833788-77833807 None:intergenic 45.0%
GCCAAGGACTTGGAATGATA+CGG - chr3_2:77833817-77833836 None:intergenic 45.0%
TCTTCATATGGCCAAGGACT+TGG - chr3_2:77833827-77833846 None:intergenic 45.0%
AGGCATGGCAATTGCAATTG+CGG + chr3_2:77833914-77833933 Msa0427130:CDS 45.0%
GCAATGCTTCTTCTAAGCCA+GGG + chr3_2:77833952-77833971 Msa0427130:CDS 45.0%
CAATGCTTCTTCTAAGCCAG+GGG + chr3_2:77833953-77833972 Msa0427130:CDS 45.0%
AATGCTTCTTCTAAGCCAGG+GGG + chr3_2:77833954-77833973 Msa0427130:CDS 45.0%
TGGTAGGAAGGGAAAAGCTA+CGG - chr3_2:77833989-77834008 None:intergenic 45.0%
!! TACCTTCTCAACTGATTCGG+AGG - chr3_2:77834045-77834064 None:intergenic 45.0%
AGGAAAATCATGCGCCCTTT+AGG + chr3_2:77834116-77834135 Msa0427130:three_prime_UTR 45.0%
GAATTGTTTGAGAGGGAGAG+AGG + chr3_2:77834225-77834244 Msa0427130:three_prime_UTR 45.0%
ATTGTTGGGGGTTCACATGT+TGG + chr3_2:77834397-77834416 Msa0427130:three_prime_UTR 45.0%
TCACATGTTGGAATCTCTGC+TGG + chr3_2:77834409-77834428 Msa0427130:three_prime_UTR 45.0%
ACTCTAACAAGTGCCCTTGA+AGG + chr3_2:77834513-77834532 Msa0427130:three_prime_UTR 45.0%
!! AATATCTATTATAAAAAAAT+TGG - chr3_2:77834291-77834310 None:intergenic 5.0%
!! TGAGTTTGTTGAGTTGCGGG+GGG - chr3_2:77828521-77828540 None:intergenic 50.0%
! AGAAGAACGCGACGTCGTTT+TGG - chr3_2:77828606-77828625 None:intergenic 50.0%
! GGGATCGTGGATCTGTGTTT+TGG + chr3_2:77828748-77828767 Msa0427130:intron 50.0%
!! ATCGTTTGTGGAGTGGGTTG+GGG + chr3_2:77829454-77829473 Msa0427130:intron 50.0%
CATCTGCAAGCAAGGGTGAT+AGG + chr3_2:77829614-77829633 Msa0427130:CDS 50.0%
TGCAAGCAAGGGTGATAGGA+AGG + chr3_2:77829618-77829637 Msa0427130:CDS 50.0%
CAACCACGATGCTGCATCAA+GGG - chr3_2:77829647-77829666 None:intergenic 50.0%
ACAACCACGATGCTGCATCA+AGG - chr3_2:77829648-77829667 None:intergenic 50.0%
!! CCATCAGGGCTTTGTTCACA+AGG - chr3_2:77829699-77829718 None:intergenic 50.0%
CCTTGTGAACAAAGCCCTGA+TGG + chr3_2:77829696-77829715 Msa0427130:CDS 50.0%
AAAGCCCTGATGGCCACATA+TGG + chr3_2:77829706-77829725 Msa0427130:CDS 50.0%
TGAGAGAGACGGTTGTCCAA+AGG + chr3_2:77829936-77829955 Msa0427130:intron 50.0%
GGTTCAAGTCCCTTACCACT+TGG - chr3_2:77830071-77830090 None:intergenic 50.0%
CCCCTGATCACATGCTTAAG+GGG - chr3_2:77830092-77830111 None:intergenic 50.0%
CCCCTTAAGCATGTGATCAG+GGG + chr3_2:77830089-77830108 Msa0427130:intron 50.0%
GTGATCAGGGGTTTGATTCC+TGG + chr3_2:77830101-77830120 Msa0427130:intron 50.0%
TGATTCCTGGCTCACGTGTA+TGG + chr3_2:77830114-77830133 Msa0427130:intron 50.0%
AGCAGTGACTAATCTCCGTC+GGG - chr3_2:77830191-77830210 None:intergenic 50.0%
CAGCAGAATCAGTACCCCAA+AGG - chr3_2:77830427-77830446 None:intergenic 50.0%
GACCGTCAACAAGGTTGTTG+TGG - chr3_2:77831294-77831313 None:intergenic 50.0%
GACGGTCGTTCTTAAATCGC+TGG + chr3_2:77831307-77831326 Msa0427130:CDS 50.0%
CCCAGTATCTTGTCTCCTAG+AGG + chr3_2:77831565-77831584 Msa0427130:CDS 50.0%
!!! CTTGGTTTTGGCTGGTGTTG+CGG + chr3_2:77831637-77831656 Msa0427130:CDS 50.0%
! CTTGAACAGCCTTGGTGACA+TGG - chr3_2:77831822-77831841 None:intergenic 50.0%
!! AGTAAACTTGCTGCCTGTGC+TGG - chr3_2:77832165-77832184 None:intergenic 50.0%
ACTGCTAGTAGGCCCCTTTA+TGG + chr3_2:77832182-77832201 Msa0427130:CDS 50.0%
! CGAGTTGACGCATACGACTA+TGG + chr3_2:77832225-77832244 Msa0427130:CDS 50.0%
GCTAATGTCCCAAGCAGTAC+AGG - chr3_2:77832854-77832873 None:intergenic 50.0%
AATTTGTGTGGGCCCATCCT+TGG + chr3_2:77833357-77833376 Msa0427130:intron 50.0%
TGGGTCCTATCCTTTGCCAT+AGG + chr3_2:77833438-77833457 Msa0427130:intron 50.0%
GATGAACAACTGCAGACACC+AGG - chr3_2:77833727-77833746 None:intergenic 50.0%
CTGTCTTGCACTATCGCAGT+AGG + chr3_2:77833750-77833769 Msa0427130:CDS 50.0%
CTCAGCCAGTTCATCTGCAT+TGG + chr3_2:77833780-77833799 Msa0427130:CDS 50.0%
! GCCAGTTCATCTGCATTGGT+AGG + chr3_2:77833784-77833803 Msa0427130:CDS 50.0%
GCCGTATCATTCCAAGTCCT+TGG + chr3_2:77833813-77833832 Msa0427130:CDS 50.0%
GGCATGGCAATTGCAATTGC+GGG + chr3_2:77833915-77833934 Msa0427130:CDS 50.0%
GGCAATGCTTCTTCTAAGCC+AGG + chr3_2:77833951-77833970 Msa0427130:CDS 50.0%
TTCTTCTAAGCCAGGGGGTA+AGG + chr3_2:77833959-77833978 Msa0427130:CDS 50.0%
!! TCAACTGATTCGGAGGACAC+AGG - chr3_2:77834038-77834057 None:intergenic 50.0%
GTCCTCCGAATCAGTTGAGA+AGG + chr3_2:77834040-77834059 Msa0427130:CDS 50.0%
TTGTTTGAGAGGGAGAGAGG+AGG + chr3_2:77834228-77834247 Msa0427130:three_prime_UTR 50.0%
!! GAGTTTGTTGAGTTGCGGGG+GGG - chr3_2:77828520-77828539 None:intergenic 55.0%
TGTGCGAGGTCCTGTCACTA+TGG - chr3_2:77829236-77829255 None:intergenic 55.0%
GACAGGACCTCGCACATTCA+AGG + chr3_2:77829240-77829259 Msa0427130:intron 55.0%
AGCGCACGGCTTTACCTGTA+TGG - chr3_2:77829529-77829548 None:intergenic 55.0%
! GCCGTGCGCTTTTGAACTTG+TGG + chr3_2:77829539-77829558 Msa0427130:five_prime_UTR 55.0%
CTTCCCTTGATGCAGCATCG+TGG + chr3_2:77829641-77829660 Msa0427130:CDS 55.0%
GTTTGGGCTTCTCGTGCTCT+AGG + chr3_2:77832039-77832058 Msa0427130:intron 55.0%
! GTTGCGGGGGGGTTTGAGTT+TGG - chr3_2:77828509-77828528 None:intergenic 60.0%
AACCCACCTTGTGTGCCCCA+CGG + chr3_2:77830161-77830180 Msa0427130:intron 60.0%
ATCTCCGTCGGGAAACCCGT+GGG - chr3_2:77830180-77830199 None:intergenic 60.0%
AATCTCCGTCGGGAAACCCG+TGG - chr3_2:77830181-77830200 None:intergenic 60.0%
ACCCACCTTGTGTGCCCCAC+GGG + chr3_2:77830162-77830181 Msa0427130:intron 65.0%
ACCCGTGGGGCACACAAGGT+GGG - chr3_2:77830166-77830185 None:intergenic 65.0%
AACCCGTGGGGCACACAAGG+TGG - chr3_2:77830167-77830186 None:intergenic 65.0%
GGAAACCCGTGGGGCACACA+AGG - chr3_2:77830170-77830189 None:intergenic 65.0%
TCTCCGTCGGGAAACCCGTG+GGG - chr3_2:77830179-77830198 None:intergenic 65.0%
! CTGCCTGTGCTGGTGCAGTG+TGG - chr3_2:77832155-77832174 None:intergenic 65.0%
GTGCCCCACGGGTTTCCCGA+CGG + chr3_2:77830173-77830192 Msa0427130:intron 70.0%
GGGCCACACTGCACCAGCAC+AGG + chr3_2:77832149-77832168 Msa0427130:CDS 70.0%
CTACGGCGCTCCTTACCCCC+TGG - chr3_2:77833972-77833991 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 77828306 77834576 77828306 ID=Msa0427130;Name=Msa0427130
chr3_2 mRNA 77828306 77834576 77828306 ID=Msa0427130-mRNA-1;Parent=Msa0427130;Name=Msa0427130-mRNA-1;_AED=0.22;_eAED=0.22;_QI=432|1|1|1|0.8|0.66|6|509|335
chr3_2 exon 77828306 77828661 77828306 ID=Msa0427130-mRNA-1:exon:20344;Parent=Msa0427130-mRNA-1
chr3_2 exon 77829534 77829739 77829534 ID=Msa0427130-mRNA-1:exon:20345;Parent=Msa0427130-mRNA-1
chr3_2 exon 77831264 77831448 77831264 ID=Msa0427130-mRNA-1:exon:20346;Parent=Msa0427130-mRNA-1
chr3_2 exon 77831545 77831745 77831545 ID=Msa0427130-mRNA-1:exon:20347;Parent=Msa0427130-mRNA-1
chr3_2 exon 77832099 77832260 77832099 ID=Msa0427130-mRNA-1:exon:20348;Parent=Msa0427130-mRNA-1
chr3_2 exon 77833738 77834576 77833738 ID=Msa0427130-mRNA-1:exon:20349;Parent=Msa0427130-mRNA-1
chr3_2 five_prime_UTR 77828306 77828661 77828306 ID=Msa0427130-mRNA-1:five_prime_utr;Parent=Msa0427130-mRNA-1
chr3_2 five_prime_UTR 77829534 77829609 77829534 ID=Msa0427130-mRNA-1:five_prime_utr;Parent=Msa0427130-mRNA-1
chr3_2 CDS 77829610 77829739 77829610 ID=Msa0427130-mRNA-1:cds;Parent=Msa0427130-mRNA-1
chr3_2 CDS 77831264 77831448 77831264 ID=Msa0427130-mRNA-1:cds;Parent=Msa0427130-mRNA-1
chr3_2 CDS 77831545 77831745 77831545 ID=Msa0427130-mRNA-1:cds;Parent=Msa0427130-mRNA-1
chr3_2 CDS 77832099 77832260 77832099 ID=Msa0427130-mRNA-1:cds;Parent=Msa0427130-mRNA-1
chr3_2 CDS 77833738 77834067 77833738 ID=Msa0427130-mRNA-1:cds;Parent=Msa0427130-mRNA-1
chr3_2 three_prime_UTR 77834068 77834576 77834068 ID=Msa0427130-mRNA-1:three_prime_utr;Parent=Msa0427130-mRNA-1
Gene Sequence

>Msa0427130

ATGTCATCTGCAAGCAAGGGTGATAGGAAGGCTTCCCTTGATGCAGCATCGTGGTTGTTTAACGTCGTTACGTCTGTGGGAATAATCCTTGTGAACAAAGCCCTGATGGCCACATATGGTTTTAGTTTTGCCACAACTTTAACTGGAATGCATTTTGCCACAACAACCTTGTTGACGGTCGTTCTTAAATCGCTGGGATATATCCAGACCTCTCATCTTCCTAAATCTGATATCATCAAATTTGTCTTGTTTGCAAATTGCTCCATTGTTGGCATGAATGTGAGTTTAATGTGGAACTCTGTCGGTTTCTATCAGATTGCTAAGCTGACTATGATCCCAGTATCTTGTCTCCTAGAGGTTGTATTGGACAATGTGCGATATTCCAGGGATACAAAGCTTAGTATTATCTTGGTTTTGGCTGGTGTTGCGGTCTGTACAGTCACTGATGTCAGCGTCAATGCTAAGGGTTTCATAGCTGCTGTCATAGCAGTTTGTAGCACAGCACTGCAGCAGTATTATGTGCATTTTCTTCAGAGGAAATATTCTATTGGATCATTTAACTTGTTGGGCCACACTGCACCAGCACAGGCAGCAAGTTTACTGCTAGTAGGCCCCTTTATGGACTATTGGCTGACAAACAAACGAGTTGACGCATACGACTATGGCTTGACATCCACTTTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGAACAAATCTCAGCCAGTTCATCTGCATTGGTAGGTTTACGGCCGTATCATTCCAAGTCCTTGGCCATATGAAGACTATTCTGGTCCTATTCATGGGGTTCATTTTCTTTGGAAAAGAGGGCCTCAATCTACATGTTGTTTTAGGCATGGCAATTGCAATTGCGGGAATGATTTGGTATGGCAATGCTTCTTCTAAGCCAGGGGGTAAGGAGCGCCGTAGCTTTTCCCTTCCTACCAGTAAAACACAAGATTATGCTGCGGTGCCTGTGTCCTCCGAATCAGTTGAGAAGGTATAA
Protein sequence

>Msa0427130

MSSASKGDRKASLDAASWLFNVVTSVGIILVNKALMATYGFSFATTLTGMHFATTTLLTVVLKSLGYIQTSHLPKSDIIKFVLFANCSIVGMNVSLMWNSVGFYQIAKLTMIPVSCLLEVVLDNVRYSRDTKLSIILVLAGVAVCTVTDVSVNAKGFIAAVIAVCSTALQQYYVHFLQRKYSIGSFNLLGHTAPAQAASLLLVGPFMDYWLTNKRVDAYDYGLTSTLFIILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLFMGFIFFGKEGLNLHVVLGMAIAIAGMIWYGNASSKPGGKERRSFSLPTSKTQDYAAVPVSSESVEKV*