AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0484680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0484680 MtrunA17_Chr3g0129401 99.701 335 1 0 1 335 1 335 0.0 679
Msa0484680 MtrunA17_Chr8g0383381 81.548 336 59 1 1 333 1 336 0.0 558
Msa0484680 MtrunA17_Chr1g0201531 78.505 321 67 1 1 321 1 319 0.0 514
Msa0484680 MtrunA17_Chr5g0393381 50.974 308 146 4 9 312 8 314 2.41e-94 284
Msa0484680 MtrunA17_Chr1g0157501 51.456 309 139 4 16 319 14 316 4.98e-94 283
Msa0484680 MtrunA17_Chr6g0467391 39.535 301 180 2 10 309 6 305 7.67e-61 197
Msa0484680 MtrunA17_Chr6g0467371 39.535 301 180 2 10 309 6 305 7.67e-61 197
Msa0484680 MtrunA17_Chr2g0326791 37.700 313 193 2 16 327 13 324 1.73e-60 197
Msa0484680 MtrunA17_Chr4g0028931 36.333 300 189 2 10 308 6 304 3.69e-55 183
Msa0484680 MtrunA17_Chr3g0128951 37.218 266 166 1 32 297 29 293 1.45e-54 182
Msa0484680 MtrunA17_Chr3g0128961 34.828 290 166 2 32 299 29 317 1.73e-51 174
Msa0484680 MtrunA17_Chr2g0298931 29.721 323 213 5 4 318 45 361 4.01e-27 109
Msa0484680 MtrunA17_Chr5g0446851 29.260 311 203 7 20 320 62 365 8.92e-23 97.8
Msa0484680 MtrunA17_Chr3g0114581 26.269 335 210 12 18 334 23 338 1.17e-14 73.9
Msa0484680 MtrunA17_Chr1g0160071 24.843 318 214 9 18 320 22 329 1.71e-13 70.5
Msa0484680 MtrunA17_Chr7g0270591 27.622 286 187 10 25 298 26 303 8.27e-13 68.6
Msa0484680 MtrunA17_Chr8g0382081 23.693 287 211 4 24 303 22 307 4.92e-11 62.8
Msa0484680 MtrunA17_Chr2g0312911 26.518 313 206 12 7 303 2 306 8.27e-11 62.4
Msa0484680 MtrunA17_Chr3g0112981 23.390 295 208 5 24 306 35 323 8.40e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0484680 AT4G09810.1 77.246 334 76 0 1 334 1 334 0.0 547
Msa0484680 AT4G39390.3 80.838 334 61 1 2 335 3 333 0.0 535
Msa0484680 AT4G39390.1 80.838 334 61 1 2 335 7 337 0.0 535
Msa0484680 AT4G39390.2 80.838 334 61 1 2 335 7 337 0.0 535
Msa0484680 AT1G34020.2 79.180 317 66 0 18 334 18 334 0.0 532
Msa0484680 AT1G34020.1 79.180 317 66 0 18 334 18 334 0.0 532
Msa0484680 AT1G34020.3 79.180 317 66 0 18 334 18 334 0.0 532
Msa0484680 AT4G09810.2 76.534 277 65 0 58 334 1 277 2.79e-161 452
Msa0484680 AT4G09810.3 80.180 222 44 0 1 222 1 222 3.58e-133 379
Msa0484680 AT1G21070.1 49.107 336 159 6 5 333 4 334 3.30e-99 296
Msa0484680 AT5G42420.1 52.318 302 138 3 4 300 2 302 5.55e-99 296
Msa0484680 AT1G76670.2 47.688 346 159 5 1 335 1 335 3.65e-97 291
Msa0484680 AT1G76670.1 47.688 346 159 5 1 335 1 335 3.65e-97 291
Msa0484680 AT2G28315.1 35.110 319 205 2 16 334 13 329 9.18e-57 187
Msa0484680 AT2G30460.1 38.346 266 163 1 32 297 29 293 2.00e-56 187
Msa0484680 AT2G30460.2 38.346 266 163 1 32 297 29 293 2.00e-56 187
Msa0484680 AT2G28315.2 36.770 291 183 1 21 311 18 307 5.48e-56 185
Msa0484680 AT1G06890.4 36.177 293 182 3 32 321 29 319 2.53e-55 184
Msa0484680 AT1G06890.3 36.177 293 182 3 32 321 29 319 2.54e-55 184
Msa0484680 AT1G06890.2 36.177 293 182 3 32 321 29 319 2.97e-55 184
Msa0484680 AT1G06890.1 36.177 293 182 3 32 321 29 319 2.97e-55 184
Msa0484680 AT2G30460.3 37.008 254 159 1 44 297 20 272 7.99e-50 169
Msa0484680 AT2G30460.6 37.008 254 159 1 44 297 20 272 7.99e-50 169
Msa0484680 AT2G30460.5 37.008 254 159 1 44 297 20 272 7.99e-50 169
Msa0484680 AT5G42420.2 36.027 297 121 11 4 297 2 232 3.38e-38 137
Msa0484680 AT2G30460.4 37.368 190 119 0 32 221 29 218 2.21e-34 129
Msa0484680 AT5G55950.4 30.503 318 198 6 20 321 3 313 1.44e-28 113
Msa0484680 AT5G55950.1 30.503 318 198 6 20 321 63 373 3.13e-28 113
Msa0484680 AT5G55950.3 28.808 302 192 6 36 321 1 295 3.68e-22 95.5
Msa0484680 AT5G57100.1 29.771 262 172 4 20 275 70 325 8.85e-22 95.5
Msa0484680 AT5G55950.2 31.915 235 148 4 20 248 63 291 1.58e-21 93.6
Msa0484680 AT5G57100.2 29.362 235 154 4 20 248 70 298 1.28e-17 82.4
Msa0484680 AT5G57100.3 32.934 167 104 3 20 180 70 234 8.56e-14 70.9
Msa0484680 AT3G10290.1 24.830 294 199 7 24 303 68 353 4.83e-13 69.7
Msa0484680 AT1G21870.1 22.018 327 233 7 18 333 23 338 2.75e-12 67.4
Msa0484680 AT5G04160.1 24.444 315 215 9 2 303 3 307 7.53e-12 65.9
Msa0484680 AT1G77610.1 24.214 318 214 9 18 320 17 322 7.76e-12 65.9

Find 135 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACATGATCTATAAATAAT+TGG 0.151640 3_4:+2139056 None:intergenic
GAGGAGGACAACTCTTATTT+TGG 0.199062 3_4:-2138989 Msa0484680:three_prime_UTR
GTTATTTACACCATAATTAT+TGG 0.234946 3_4:+2138794 None:intergenic
AAAGGAAGTGATTAAACTTT+TGG 0.242017 3_4:-2139150 Msa0484680:three_prime_UTR
TATGCAGCCACAACTTTAAC+TGG 0.250967 3_4:-2141976 Msa0484680:intron
CTTGAAGGAATTTAATATAA+AGG 0.254018 3_4:-2138705 Msa0484680:three_prime_UTR
GTGTAATAATTCACTAATTT+AGG 0.263336 3_4:+2144920 None:intergenic
ACTGCTAGTAGGCCCCTTTA+TGG 0.271752 3_4:-2141051 Msa0484680:CDS
GCTTAGTATTATCTTGGTTT+TGG 0.281700 3_4:-2141608 Msa0484680:CDS
AATTTGATGATATCAGATTT+AGG 0.302073 3_4:+2141880 None:intergenic
CTTCAGAGGAAATATTCTAT+TGG 0.311098 3_4:-2141122 Msa0484680:CDS
TTTAAGGAGTTGAATTTAAA+GGG 0.327501 3_4:+2144751 None:intergenic
CTGATAACTGACTGCATTGT+TGG 0.327915 3_4:-2138851 Msa0484680:three_prime_UTR
AGAAGAACGCGACGTCGTTT+TGG 0.331994 3_4:+2144631 None:intergenic
TTGAAGGAATTTAATATAAA+GGG 0.336918 3_4:-2138704 Msa0484680:three_prime_UTR
TGATAACTGACTGCATTGTT+GGG 0.343052 3_4:-2138850 Msa0484680:three_prime_UTR
GGCATGGCAATTGCAATTGC+GGG 0.344692 3_4:-2139318 Msa0484680:CDS
ATCGAAGAAATGTGAGTTGC+GGG 0.345453 3_4:+2144806 None:intergenic
TATTGGATCATTTAACTTGT+TGG 0.347599 3_4:-2141105 Msa0484680:CDS
ATTGGATCATTTAACTTGTT+GGG 0.348429 3_4:-2141104 Msa0484680:CDS
ATTTCTTCGATCTCTGAATC+TGG 0.348494 3_4:-2144794 Msa0484680:five_prime_UTR
TACAAAGCTTAGTATTATCT+TGG 0.348665 3_4:-2141614 Msa0484680:CDS
CATCTGCATTGGTAGGTTTA+CGG 0.351694 3_4:-2139442 Msa0484680:CDS
TTGCAATTGCGGGAATGATT+TGG 0.358279 3_4:-2139308 Msa0484680:CDS
CGAGTTGACGCATACGACTA+TGG 0.358338 3_4:-2141008 Msa0484680:CDS
AGGAAAATCATGCGCCCTTT+AGG 0.358491 3_4:-2139117 Msa0484680:three_prime_UTR
TGGCCATATGAAGACTATTC+TGG 0.359788 3_4:-2139400 Msa0484680:CDS
GACTATTCTGGTCCTATTCA+TGG 0.375174 3_4:-2139388 Msa0484680:CDS
GACGGTCGTTCTTAAATCGC+TGG 0.375697 3_4:-2141926 Msa0484680:CDS
ATAATTATGGTGTAAATAAC+TGG 0.378385 3_4:-2138791 Msa0484680:three_prime_UTR
GAACTCTGTCGGTTTCTATC+AGG 0.386221 3_4:-2141806 Msa0484680:intron
GAATGAGTTTGTTGAGTTGC+GGG 0.392966 3_4:+2144713 None:intergenic
TAGGCCCCTTTATGGACTAT+TGG 0.397806 3_4:-2141043 Msa0484680:CDS
TAAAACCATATGTGGCCATC+AGG 0.399543 3_4:+2143523 None:intergenic
AGGGTTATGCTAACTATGTT+AGG 0.399722 3_4:-2138685 Msa0484680:three_prime_UTR
CTTTATATTAAATTCCTTCA+AGG 0.400993 3_4:+2138706 None:intergenic
TGTCAGCCAATAGTCCATAA+AGG 0.405717 3_4:+2141037 None:intergenic
AATGAATCAGCTTGCCTAAA+GGG 0.406259 3_4:+2139103 None:intergenic
AGAGCTTCCAATATTCAAAC+TGG 0.410798 3_4:+2143655 None:intergenic
AGTAAACTTGCTGCCTGTGC+TGG 0.410997 3_4:+2141071 None:intergenic
TGGACAATGTGCGATATTCC+AGG 0.411360 3_4:-2141639 Msa0484680:CDS
TTATACCTTCTCAACTGATT+CGG 0.413865 3_4:+2139188 None:intergenic
TTGTCTCCTAGAGGTTGTAT+TGG 0.415445 3_4:-2141659 Msa0484680:CDS
TTTGCAAATTGCTCCATTGT+TGG 0.415613 3_4:-2141850 Msa0484680:CDS
ACCTCTAGGAGACAAGATAC+TGG 0.420192 3_4:+2141667 None:intergenic
TCTTCATATGGCCAAGGACT+TGG 0.420217 3_4:+2139409 None:intergenic
AGAAAATGAACCCCATGAAT+AGG 0.422344 3_4:+2139376 None:intergenic
TGGTAAGTGACCAATAATTA+TGG 0.422349 3_4:-2138804 Msa0484680:three_prime_UTR
GTCAGCCAATAGTCCATAAA+GGG 0.423028 3_4:+2141038 None:intergenic
AACATGATCTATAAATAATT+GGG 0.428104 3_4:+2139057 None:intergenic
TGCTAACTATGTTAGGCCTC+AGG 0.428657 3_4:-2138678 None:intergenic
ACAAGAAATTTGTGAGTAAA+CGG 0.429095 3_4:+2144838 None:intergenic
TGCCACAACAACCTTGTTGA+CGG 0.432184 3_4:-2141944 Msa0484680:CDS
CATCTGCAAGCAAGGGTGAT+AGG 0.433535 3_4:-2143620 Msa0484680:CDS
ACCTACCAATGCAGATGAAC+TGG 0.435560 3_4:+2139448 None:intergenic
ACTCTAACAAGTGCCCTTGA+AGG 0.448083 3_4:-2138720 Msa0484680:three_prime_UTR
GTTTAACGTCGTTACGTCTG+TGG 0.448334 3_4:-2143568 Msa0484680:CDS
GGCAATGCTTCTTCTAAGCC+AGG 0.448871 3_4:-2139282 Msa0484680:CDS
CCATCAGGGCTTTGTTCACA+AGG 0.466439 3_4:+2143538 None:intergenic
GGACCAGAATAGTCTTCATA+TGG 0.477152 3_4:+2139397 None:intergenic
AAACAATTCCTTAACACAAA+AGG 0.477553 3_4:+2139022 None:intergenic
ACTATTCTGGTCCTATTCAT+GGG 0.478886 3_4:-2139387 Msa0484680:CDS
GAATTGTTTGAGAGGGAGAG+AGG 0.479175 3_4:-2139008 Msa0484680:three_prime_UTR
AATACTAAGCTTTGTATCCC+TGG 0.480739 3_4:+2141621 None:intergenic
TTTAACGTCGTTACGTCTGT+GGG 0.489306 3_4:-2143567 Msa0484680:CDS
AAAGCCCTGATGGCCACATA+TGG 0.489431 3_4:-2143528 Msa0484680:CDS
GCCGTATCATTCCAAGTCCT+TGG 0.491890 3_4:-2139420 Msa0484680:CDS
ATTTAGGAAGATGAGAGGTC+TGG 0.493409 3_4:+2141896 None:intergenic
TGATGTCAGCGTCAATGCTA+AGG 0.502960 3_4:-2141560 Msa0484680:CDS
TGAATGAGTTTGTTGAGTTG+CGG 0.504450 3_4:+2144712 None:intergenic
CAATATGTCATCTGCAAGCA+AGG 0.504642 3_4:-2143628 Msa0484680:exon
AAATGAATCAGCTTGCCTAA+AGG 0.508812 3_4:+2139102 None:intergenic
ACCAAAACTAAAACCATATG+TGG 0.510874 3_4:+2143515 None:intergenic
GATAACTGACTGCATTGTTG+GGG 0.513427 3_4:-2138849 Msa0484680:three_prime_UTR
CTCAGCCAGTTCATCTGCAT+TGG 0.515524 3_4:-2139453 Msa0484680:CDS
GCCAGTTCATCTGCATTGGT+AGG 0.519406 3_4:-2139449 Msa0484680:CDS
TCACATGTTGGAATCTCTGC+TGG 0.521974 3_4:-2138824 Msa0484680:three_prime_UTR
TTTATATTAAATTCCTTCAA+GGG 0.522386 3_4:+2138707 None:intergenic
TACCTTCTCAACTGATTCGG+AGG 0.531786 3_4:+2139191 None:intergenic
GACCGTCAACAAGGTTGTTG+TGG 0.536338 3_4:+2141942 None:intergenic
GCAATGCTTCTTCTAAGCCA+GGG 0.536976 3_4:-2139281 Msa0484680:CDS
AGGCATGGCAATTGCAATTG+CGG 0.537999 3_4:-2139319 Msa0484680:CDS
CAACCACGATGCTGCATCAA+GGG 0.538037 3_4:+2143590 None:intergenic
TTGTTTGAGAGGGAGAGAGG+AGG 0.539307 3_4:-2139005 Msa0484680:three_prime_UTR
CTAATTGAGATGCAAGAAGC+AGG 0.542926 3_4:-2144898 Msa0484680:five_prime_UTR
CCTTGTGAACAAAGCCCTGA+TGG 0.544084 3_4:-2143538 Msa0484680:CDS
AGTTTAATGTGGAACTCTGT+CGG 0.546444 3_4:-2141817 Msa0484680:CDS
ACGGTCGTTCTTAAATCGCT+GGG 0.547332 3_4:-2141925 Msa0484680:CDS
TGTTAAGGAATTGTTTGAGA+GGG 0.555195 3_4:-2139015 Msa0484680:three_prime_UTR
GCCAAGGACTTGGAATGATA+CGG 0.556173 3_4:+2139419 None:intergenic
ACAACCACGATGCTGCATCA+AGG 0.557194 3_4:+2143589 None:intergenic
GGGCCACACTGCACCAGCAC+AGG 0.558002 3_4:-2141084 Msa0484680:CDS
GCTAACTATGTTAGGCCTCA+GGG 0.565015 3_4:-2138677 None:intergenic
AATGAGTTTGTTGAGTTGCG+GGG 0.569925 3_4:+2144714 None:intergenic
TTAAGGAGTTGAATTTAAAG+GGG 0.570688 3_4:+2144752 None:intergenic
ATGCATTCCAGTTAAAGTTG+TGG 0.571311 3_4:+2141969 None:intergenic
TGCAAGCAAGGGTGATAGGA+AGG 0.574166 3_4:-2143616 Msa0484680:CDS
TTAGTTCCTTCACACATCAC+AGG 0.576709 3_4:-2144594 Msa0484680:intron
CTGTCTTGCACTATCGCAGT+AGG 0.578297 3_4:-2139483 Msa0484680:CDS
CCCAGTATCTTGTCTCCTAG+AGG 0.578526 3_4:-2141668 Msa0484680:CDS
CCTCTAGGAGACAAGATACT+GGG 0.579558 3_4:+2141668 None:intergenic
CTAAAACAACATGTAGATTG+AGG 0.583168 3_4:+2139340 None:intergenic
GATGTCAGCGTCAATGCTAA+GGG 0.584376 3_4:-2141559 Msa0484680:CDS
TAAGGAGTTGAATTTAAAGG+GGG 0.586132 3_4:+2144753 None:intergenic
ATTGCGGGAATGATTTGGTA+TGG 0.587500 3_4:-2139303 Msa0484680:CDS
GGACAATGTGCGATATTCCA+GGG 0.588944 3_4:-2141638 Msa0484680:CDS
GATCGAAGAAATGTGAGTTG+CGG 0.592494 3_4:+2144805 None:intergenic
AAAACCATATGTGGCCATCA+GGG 0.593172 3_4:+2143524 None:intergenic
TTTAAGAACGACCGTCAACA+AGG 0.599931 3_4:+2141933 None:intergenic
GCAGCAAGTTTACTGCTAGT+AGG 0.603392 3_4:-2141062 Msa0484680:CDS
GCATGAATGTGAGTTTAATG+TGG 0.603505 3_4:-2141828 Msa0484680:CDS
GTCCTCCGAATCAGTTGAGA+AGG 0.604732 3_4:-2139193 Msa0484680:CDS
ACTCACATTCATGCCAACAA+TGG 0.605104 3_4:+2141837 None:intergenic
TCAACTGATTCGGAGGACAC+AGG 0.609341 3_4:+2139198 None:intergenic
GTGTTAAGGAATTGTTTGAG+AGG 0.609813 3_4:-2139016 Msa0484680:three_prime_UTR
GAATAGTCTTCATATGGCCA+AGG 0.611320 3_4:+2139403 None:intergenic
CTGCCTGTGCTGGTGCAGTG+TGG 0.611883 3_4:+2141081 None:intergenic
ATGAGTTTGTTGAGTTGCGG+GGG 0.614708 3_4:+2144715 None:intergenic
CATTGTCCAATACAACCTCT+AGG 0.615351 3_4:+2141653 None:intergenic
CTATTCTGGTCCTATTCATG+GGG 0.619940 3_4:-2139386 Msa0484680:CDS
ATAACTGACTGCATTGTTGG+GGG 0.620986 3_4:-2138848 Msa0484680:three_prime_UTR
ATCAGATTTAGGAAGATGAG+AGG 0.631502 3_4:+2141891 None:intergenic
TGGTAGGAAGGGAAAAGCTA+CGG 0.633359 3_4:+2139247 None:intergenic
AATAATTGGGAATTCCCTCA+AGG 0.634632 3_4:+2139070 None:intergenic
CAATGCTTCTTCTAAGCCAG+GGG 0.639994 3_4:-2139280 Msa0484680:CDS
ACCACAAGTTCAAAAGCGCA+CGG 0.656911 3_4:+2143694 None:intergenic
TGAGTTTGTTGAGTTGCGGG+GGG 0.659796 3_4:+2144716 None:intergenic
AACAAACCTGTGATGTGTGA+AGG 0.663637 3_4:+2144588 None:intergenic
AATATGTCATCTGCAAGCAA+GGG 0.670129 3_4:-2143627 Msa0484680:CDS
TCAGCCAATAGTCCATAAAG+GGG 0.679688 3_4:+2141039 None:intergenic
TCGAAGAAATGTGAGTTGCG+GGG 0.688360 3_4:+2144807 None:intergenic
CTTCCCTTGATGCAGCATCG+TGG 0.693234 3_4:-2143593 Msa0484680:CDS
TGTGAAGGAACTAAACGACT+CGG 0.699671 3_4:+2144603 None:intergenic
TAAAACACAAGATTATGCTG+CGG 0.731181 3_4:-2139223 Msa0484680:CDS
AATGCTTCTTCTAAGCCAGG+GGG 0.760488 3_4:-2139279 Msa0484680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAAATTATAAACAAATA+AGG + chr3_4:2139460-2139479 None:intergenic 10.0%
!! CTTATTTGTTTATAATTTAA+TGG - chr3_4:2139458-2139477 Msa0484680:CDS 10.0%
!!! CGATTTTATTTTTATTTTTT+AGG + chr3_4:2139811-2139830 None:intergenic 10.0%
!! AAGTAAATATATTCATTTAT+AGG - chr3_4:2142218-2142237 Msa0484680:intron 10.0%
!!! ATTTTAAAATGTGATAAATT+GGG - chr3_4:2142297-2142316 Msa0484680:intron 10.0%
!! TAAAGTTATTTATATAACTA+AGG - chr3_4:2142685-2142704 Msa0484680:intron 10.0%
!! GATATACTATTTATAAATTT+AGG + chr3_4:2142928-2142947 None:intergenic 10.0%
!! TTCAAATTAAAAAAATTGAT+GGG + chr3_4:2143047-2143066 None:intergenic 10.0%
!! TTTCAAATTAAAAAAATTGA+TGG + chr3_4:2143048-2143067 None:intergenic 10.0%
!!! AATAAATACTTTCTATTTTA+AGG + chr3_4:2144855-2144874 None:intergenic 10.0%
!!! ATTTTTTTCTTGATTGTAAA+AGG + chr3_4:2139761-2139780 None:intergenic 15.0%
!!! TTATTTTTTAGGAAAAAACA+AGG + chr3_4:2139800-2139819 None:intergenic 15.0%
!! AATAAAAATAAAATCGTTTG+TGG - chr3_4:2139815-2139834 Msa0484680:intron 15.0%
!!! TAGTACTTTATTTTTTTCTT+GGG + chr3_4:2140625-2140644 None:intergenic 15.0%
!! TCAAGTATATTATACTAAAA+AGG + chr3_4:2140710-2140729 None:intergenic 15.0%
!! ATCAACAACTATAAATATAA+TGG + chr3_4:2141090-2141109 None:intergenic 15.0%
!!! GATTTTAAAATGTGATAAAT+TGG - chr3_4:2142296-2142315 Msa0484680:intron 15.0%
!! AACATGATCTATAAATAATT+GGG + chr3_4:2144553-2144572 None:intergenic 15.0%
!! TTTATATTAAATTCCTTCAA+GGG + chr3_4:2144903-2144922 None:intergenic 15.0%
!! TTGAAGGAATTTAATATAAA+GGG - chr3_4:2144903-2144922 Msa0484680:five_prime_UTR 15.0%
!! GTGTAATAATTCACTAATTT+AGG + chr3_4:2138690-2138709 None:intergenic 20.0%
!! TTTAAGGAGTTGAATTTAAA+GGG + chr3_4:2138859-2138878 None:intergenic 20.0%
!!! TTTTAAGGAGTTGAATTTAA+AGG + chr3_4:2138860-2138879 None:intergenic 20.0%
!!! AAATGAAGAGATTTTAGTTT+TGG + chr3_4:2138929-2138948 None:intergenic 20.0%
!!! TATAATTTGTTTTGACTTGA+TGG - chr3_4:2139243-2139262 Msa0484680:CDS 20.0%
!!! TTGATTTGATTGTAGTTAAT+TGG - chr3_4:2139330-2139349 Msa0484680:CDS 20.0%
!!! TTTGCAATTTTGATACATTT+AGG - chr3_4:2139581-2139600 Msa0484680:intron 20.0%
!!! TTGCAATTTTGATACATTTA+GGG - chr3_4:2139582-2139601 Msa0484680:intron 20.0%
!! TGTTCTTGTATATATGTATA+CGG - chr3_4:2139684-2139703 Msa0484680:intron 20.0%
!!! ATGATTTATTTTTTCCATAC+AGG - chr3_4:2139885-2139904 Msa0484680:intron 20.0%
!!! GTAGTACTTTATTTTTTTCT+TGG + chr3_4:2140626-2140645 None:intergenic 20.0%
!! AAGAGAATGAAATAAAATTG+TGG + chr3_4:2140952-2140971 None:intergenic 20.0%
!!! ATATAAACTAAACTTTTCCT+CGG - chr3_4:2141049-2141068 Msa0484680:CDS 20.0%
!! ATTATAAGATATAGAAAGTC+AGG + chr3_4:2141606-2141625 None:intergenic 20.0%
!!! AATTTGATGATATCAGATTT+AGG + chr3_4:2141730-2141749 None:intergenic 20.0%
!!! TTAAAATAACTTGTAAGCTT+AGG - chr3_4:2142752-2142771 Msa0484680:intron 20.0%
!!! TAAAATAACTTGTAAGCTTA+GGG - chr3_4:2142753-2142772 Msa0484680:intron 20.0%
!! TACTTTCTTTACTAACATTA+TGG + chr3_4:2143163-2143182 None:intergenic 20.0%
!! TCTAAGTGAATTTAATGATT+TGG + chr3_4:2143250-2143269 None:intergenic 20.0%
!! GTAGATTTATAACAATGTAT+AGG + chr3_4:2143649-2143668 None:intergenic 20.0%
!!! ATTCTCTATATTTTTCAACT+TGG - chr3_4:2143792-2143811 Msa0484680:intron 20.0%
!!! TTCTCTATATTTTTCAACTT+GGG - chr3_4:2143793-2143812 Msa0484680:intron 20.0%
!!! GTTTTAAAGTTGACATAAAT+GGG + chr3_4:2143998-2144017 None:intergenic 20.0%
!!! AGTTTTAAAGTTGACATAAA+TGG + chr3_4:2143999-2144018 None:intergenic 20.0%
!! CAACATGATCTATAAATAAT+TGG + chr3_4:2144554-2144573 None:intergenic 20.0%
!! GTTATTTACACCATAATTAT+TGG + chr3_4:2144816-2144835 None:intergenic 20.0%
!! ATAATTATGGTGTAAATAAC+TGG - chr3_4:2144816-2144835 Msa0484680:five_prime_UTR 20.0%
!!! AAATACTTTCTATTTTAAGG+AGG + chr3_4:2144852-2144871 None:intergenic 20.0%
!! CTTTATATTAAATTCCTTCA+AGG + chr3_4:2144904-2144923 None:intergenic 20.0%
!! CTTGAAGGAATTTAATATAA+AGG - chr3_4:2144902-2144921 Msa0484680:five_prime_UTR 20.0%
! ACAAGAAATTTGTGAGTAAA+CGG + chr3_4:2138772-2138791 None:intergenic 25.0%
! TTAAGGAGTTGAATTTAAAG+GGG + chr3_4:2138858-2138877 None:intergenic 25.0%
! TTGTGAATTAGAGATTTGTA+TGG - chr3_4:2139084-2139103 Msa0484680:three_prime_UTR 25.0%
! TGTATGGTTTCTTAATTCTT+AGG - chr3_4:2139100-2139119 Msa0484680:three_prime_UTR 25.0%
! GTATGGTTTCTTAATTCTTA+GGG - chr3_4:2139101-2139120 Msa0484680:three_prime_UTR 25.0%
!!! TTTTGGATTGTGTTACTTTT+TGG - chr3_4:2139138-2139157 Msa0484680:three_prime_UTR 25.0%
!! AATTTGTAACTTCGTGATTT+TGG - chr3_4:2139197-2139216 Msa0484680:CDS 25.0%
!!! GATTATTGCGTTTTATTGAT+TGG - chr3_4:2139304-2139323 Msa0484680:CDS 25.0%
!!! CAGATAATTCTTCACTTTTT+TGG + chr3_4:2139408-2139427 None:intergenic 25.0%
!! TTATAAACAAATAAGGCACT+GGG + chr3_4:2139453-2139472 None:intergenic 25.0%
! ATTATAAACAAATAAGGCAC+TGG + chr3_4:2139454-2139473 None:intergenic 25.0%
! TATACGGATATAAATTGATG+TGG - chr3_4:2139700-2139719 Msa0484680:intron 25.0%
!! TTTTCTTGATTGTAAAAGGA+CGG + chr3_4:2139757-2139776 None:intergenic 25.0%
! GAAAAATCCAGTTTGAATAT+TGG - chr3_4:2139945-2139964 Msa0484680:intron 25.0%
!!! ATATGGTTTTAGTTTTGGTA+TGG - chr3_4:2140096-2140115 Msa0484680:intron 25.0%
!!! TATGGTTTTAGTTTTGGTAT+GGG - chr3_4:2140097-2140116 Msa0484680:intron 25.0%
! ATCAATAAGAGAGAAAATGA+AGG + chr3_4:2140234-2140253 None:intergenic 25.0%
!!! TTTTTTATCCATGCATTGTT+TGG - chr3_4:2140383-2140402 Msa0484680:intron 25.0%
! GCTCTATAATATTGCTTATA+AGG + chr3_4:2141151-2141170 None:intergenic 25.0%
! CAATTACAAAAAGTTTGTGT+AGG + chr3_4:2141244-2141263 None:intergenic 25.0%
! AGATAAACCACGTTATTATT+TGG + chr3_4:2141524-2141543 None:intergenic 25.0%
! GTTTCTATCAGGTAAAATTT+GGG - chr3_4:2141812-2141831 Msa0484680:CDS 25.0%
! TCTGACAATTTCATTTCAAA+AGG + chr3_4:2141900-2141919 None:intergenic 25.0%
! TACAAAGCTTAGTATTATCT+TGG - chr3_4:2141993-2142012 Msa0484680:intron 25.0%
!!! TATTGGATCATTTAACTTGT+TGG - chr3_4:2142502-2142521 Msa0484680:intron 25.0%
!!! ATTGGATCATTTAACTTGTT+GGG - chr3_4:2142503-2142522 Msa0484680:intron 25.0%
! GAATTAGTTAAGCTTAAACT+AGG + chr3_4:2142846-2142865 None:intergenic 25.0%
!!! AATAATTATGTCCACTTTTC+AGG + chr3_4:2143188-2143207 None:intergenic 25.0%
!! CATAAAATGCAAGTGTTTTT+AGG + chr3_4:2143334-2143353 None:intergenic 25.0%
! ACCTTCCAGAAATTATATAT+GGG + chr3_4:2143518-2143537 None:intergenic 25.0%
! AACCTTCCAGAAATTATATA+TGG + chr3_4:2143519-2143538 None:intergenic 25.0%
! CGTATACTACTAAATATATC+TGG + chr3_4:2143620-2143639 None:intergenic 25.0%
! AGTACATACTAAATTTGTGT+GGG - chr3_4:2143720-2143739 Msa0484680:intron 25.0%
! TACTAGAACTTTACTAGATA+TGG + chr3_4:2143769-2143788 None:intergenic 25.0%
! TAGAAACACAATTTATTCTG+TGG - chr3_4:2143851-2143870 Msa0484680:intron 25.0%
!!! TTCATTTTCTTTGGAAAAGA+GGG - chr3_4:2144244-2144263 Msa0484680:intron 25.0%
!! AGTTGAGAAGGTATAAAAAT+AGG - chr3_4:2144426-2144445 Msa0484680:intron 25.0%
! TAAAAATAGGCTTACAAGAA+AGG - chr3_4:2144439-2144458 Msa0484680:intron 25.0%
!! AAAGGAAGTGATTAAACTTT+TGG - chr3_4:2144457-2144476 Msa0484680:intron 25.0%
!! TCATTTTCTTTTATACCTTG+AGG - chr3_4:2144522-2144541 Msa0484680:intron 25.0%
!! CATTTTCTTTTATACCTTGA+GGG - chr3_4:2144523-2144542 Msa0484680:intron 25.0%
! AAACAATTCCTTAACACAAA+AGG + chr3_4:2144588-2144607 None:intergenic 25.0%
!!! TTATTCCATTTTTGTCTTCA+TGG - chr3_4:2144709-2144728 Msa0484680:five_prime_UTR 25.0%
TAAGGAGTTGAATTTAAAGG+GGG + chr3_4:2138857-2138876 None:intergenic 30.0%
CACGAAAAAACTTCAAGAAT+CGG + chr3_4:2139048-2139067 None:intergenic 30.0%
! TGATGAAAATTGTGCTATTC+TGG - chr3_4:2139269-2139288 Msa0484680:CDS 30.0%
!! TATAAACAAATAAGGCACTG+GGG + chr3_4:2139452-2139471 None:intergenic 30.0%
! TTCTCAAATGTGTTTTTCGT+TGG + chr3_4:2139494-2139513 None:intergenic 30.0%
CTAATTTGACTACGTCAAAT+AGG - chr3_4:2139514-2139533 Msa0484680:intron 30.0%
GTCTCATTTATTAGTCATGT+TGG + chr3_4:2139548-2139567 None:intergenic 30.0%
ACTAATAAATGAGACACTTG+TGG - chr3_4:2139553-2139572 Msa0484680:intron 30.0%
TACAAGAACATTGTGAACAA+AGG + chr3_4:2139674-2139693 None:intergenic 30.0%
TGATGTGGTCTAATTGTTTA+TGG - chr3_4:2139715-2139734 Msa0484680:intron 30.0%
TTTCTTGATTGTAAAAGGAC+GGG + chr3_4:2139756-2139775 None:intergenic 30.0%
AAATAAAATCGTTTGTGGAG+TGG - chr3_4:2139820-2139839 Msa0484680:intron 30.0%
AATAAAATCGTTTGTGGAGT+GGG - chr3_4:2139821-2139840 Msa0484680:intron 30.0%
! ATTCAAACTGGATTTTTCAC+TGG + chr3_4:2139943-2139962 None:intergenic 30.0%
ACCAAAACTAAAACCATATG+TGG + chr3_4:2140095-2140114 None:intergenic 30.0%
! AACCTTTTTGTGACAACTTT+TGG - chr3_4:2140203-2140222 Msa0484680:intron 30.0%
! ACCTTTTTGTGACAACTTTT+GGG - chr3_4:2140204-2140223 Msa0484680:intron 30.0%
AGAGAGAAAAATGAAGAAAG+AGG - chr3_4:2140266-2140285 Msa0484680:intron 30.0%
GAGAGAAAAATGAAGAAAGA+GGG - chr3_4:2140267-2140286 Msa0484680:intron 30.0%
CTTTATATCCAAACAATGCA+TGG + chr3_4:2140394-2140413 None:intergenic 30.0%
GTACTAATTTCAACCAACAA+TGG - chr3_4:2140413-2140432 Msa0484680:intron 30.0%
AATTTCAACCAACAATGGAT+TGG - chr3_4:2140418-2140437 Msa0484680:intron 30.0%
TCACGTGTATGGATAAAATT+CGG - chr3_4:2140499-2140518 Msa0484680:intron 30.0%
TGTATGGATAAAATTCGGTT+GGG - chr3_4:2140504-2140523 Msa0484680:intron 30.0%
AAAACTTCGTACCAATATCA+TGG - chr3_4:2140596-2140615 Msa0484680:intron 30.0%
! TACTTTTGTGCTTTCCTTTT+TGG - chr3_4:2140643-2140662 Msa0484680:intron 30.0%
ATGCATGTATCATACCAAAA+AGG + chr3_4:2140660-2140679 None:intergenic 30.0%
! TGTATTCGTTTTGTGGAAAA+AGG - chr3_4:2140679-2140698 Msa0484680:intron 30.0%
CTTACTCTATAATAACCTGA+TGG - chr3_4:2140823-2140842 Msa0484680:intron 30.0%
!! TATCAAATTTCTAGTCCATC+AGG + chr3_4:2140841-2140860 None:intergenic 30.0%
CACGTAGAAAATATCCTAAA+GGG - chr3_4:2140869-2140888 Msa0484680:intron 30.0%
!! TAGTTGTTGATAATGCCAAT+AGG - chr3_4:2141099-2141118 Msa0484680:CDS 30.0%
!! AGTTGTTGATAATGCCAATA+GGG - chr3_4:2141100-2141119 Msa0484680:CDS 30.0%
ATAATGCCAATAGGGAAAAT+TGG - chr3_4:2141108-2141127 Msa0484680:CDS 30.0%
ATGTTCAATCCAAAAATCTG+AGG - chr3_4:2141266-2141285 Msa0484680:intron 30.0%
TGTTCAATCCAAAAATCTGA+GGG - chr3_4:2141267-2141286 Msa0484680:intron 30.0%
! TGATATCACAACAAACCTTT+TGG + chr3_4:2141315-2141334 None:intergenic 30.0%
! TTTGTTGTGATATCAGAGAT+AGG - chr3_4:2141320-2141339 Msa0484680:intron 30.0%
! TTGAAGCAACTTGTGATTTT+TGG - chr3_4:2141371-2141390 Msa0484680:intron 30.0%
AACCACGTTATTATTTGGTT+GGG + chr3_4:2141519-2141538 None:intergenic 30.0%
AAACCACGTTATTATTTGGT+TGG + chr3_4:2141520-2141539 None:intergenic 30.0%
AAGTCAGGAATTTAGCATTT+CGG + chr3_4:2141591-2141610 None:intergenic 30.0%
GGTTTCTATCAGGTAAAATT+TGG - chr3_4:2141811-2141830 Msa0484680:CDS 30.0%
! GCTTAGTATTATCTTGGTTT+TGG - chr3_4:2141999-2142018 Msa0484680:intron 30.0%
TATCAAACCTGAATCTTAGT+TGG - chr3_4:2142144-2142163 Msa0484680:intron 30.0%
ATCAAACCTGAATCTTAGTT+GGG - chr3_4:2142145-2142164 Msa0484680:intron 30.0%
!! ACAGGAAAGTTTGTTGAAAA+AGG + chr3_4:2142326-2142345 None:intergenic 30.0%
AAGACTGCTTATGATGAAAA+TGG + chr3_4:2142355-2142374 None:intergenic 30.0%
CTTCAGAGGAAATATTCTAT+TGG - chr3_4:2142485-2142504 Msa0484680:intron 30.0%
AGAAATAGAGAAACTTACAG+TGG + chr3_4:2142633-2142652 None:intergenic 30.0%
TTCTTCACCTATGAAAGAAA+GGG + chr3_4:2142720-2142739 None:intergenic 30.0%
ATTCTTCACCTATGAAAGAA+AGG + chr3_4:2142721-2142740 None:intergenic 30.0%
TTACAAATTGAAAACCGAGT+CGG + chr3_4:2142883-2142902 None:intergenic 30.0%
ATTCAAAAGTCCAAATTTGC+TGG - chr3_4:2142950-2142969 Msa0484680:intron 30.0%
! AAAAAATTGATGGGCATGAA+TGG + chr3_4:2143038-2143057 None:intergenic 30.0%
CAAATGTAGAGAATTCTCTA+CGG - chr3_4:2143118-2143137 Msa0484680:intron 30.0%
AAGAAAGTAATCCTGAAAAG+TGG - chr3_4:2143174-2143193 Msa0484680:intron 30.0%
TCACACTACTTCAATTAGAT+TGG + chr3_4:2143276-2143295 None:intergenic 30.0%
TTCCAGAAATTATATATGGG+GGG + chr3_4:2143515-2143534 None:intergenic 30.0%
CTTCCAGAAATTATATATGG+GGG + chr3_4:2143516-2143535 None:intergenic 30.0%
CCTTCCAGAAATTATATATG+GGG + chr3_4:2143517-2143536 None:intergenic 30.0%
AATCATTGTAGAAGCAGAAT+TGG + chr3_4:2143565-2143584 None:intergenic 30.0%
CAGTACATACTAAATTTGTG+TGG - chr3_4:2143719-2143738 Msa0484680:intron 30.0%
! CTTTACTAGATATGGTTCTA+AGG + chr3_4:2143761-2143780 None:intergenic 30.0%
AAAAATGAGTGTTTGTCCTA+TGG + chr3_4:2143831-2143850 None:intergenic 30.0%
TGACATTCACCTTAGAAAAA+AGG - chr3_4:2143953-2143972 Msa0484680:intron 30.0%
GACATTCACCTTAGAAAAAA+GGG - chr3_4:2143954-2143973 Msa0484680:intron 30.0%
!!! ATGGTTGTTTTTATGAGTGA+AGG + chr3_4:2144032-2144051 None:intergenic 30.0%
AACAGTCAAAACAGTAATCA+TGG + chr3_4:2144051-2144070 None:intergenic 30.0%
!!! ATGATTACTGTTTTGACTGT+TGG - chr3_4:2144050-2144069 Msa0484680:intron 30.0%
!! GTTCATTTTCTTTGGAAAAG+AGG - chr3_4:2144243-2144262 Msa0484680:intron 30.0%
CTAAAACAACATGTAGATTG+AGG + chr3_4:2144270-2144289 None:intergenic 30.0%
!!! CTCAATCTACATGTTGTTTT+AGG - chr3_4:2144268-2144287 Msa0484680:intron 30.0%
! TAATCTTGTGTTTTACTGGT+AGG + chr3_4:2144379-2144398 None:intergenic 30.0%
! AGCATAATCTTGTGTTTTAC+TGG + chr3_4:2144383-2144402 None:intergenic 30.0%
TAAAACACAAGATTATGCTG+CGG - chr3_4:2144384-2144403 Msa0484680:intron 30.0%
TTATACCTTCTCAACTGATT+CGG + chr3_4:2144422-2144441 None:intergenic 30.0%
TGTTAAGGAATTGTTTGAGA+GGG - chr3_4:2144592-2144611 Msa0484680:intron 30.0%
!!! ACAACTCTTATTTTGGAAGA+GGG - chr3_4:2144625-2144644 Msa0484680:five_prime_UTR 30.0%
TGGTAAGTGACCAATAATTA+TGG - chr3_4:2144803-2144822 Msa0484680:five_prime_UTR 30.0%
ATTTCTTCGATCTCTGAATC+TGG - chr3_4:2138813-2138832 Msa0484680:three_prime_UTR 35.0%
!! TGAATGAGTTTGTTGAGTTG+CGG + chr3_4:2138898-2138917 None:intergenic 35.0%
TTCTTGATTGTAAAAGGACG+GGG + chr3_4:2139755-2139774 None:intergenic 35.0%
AGAGCTTCCAATATTCAAAC+TGG + chr3_4:2139955-2139974 None:intergenic 35.0%
AATATGTCATCTGCAAGCAA+GGG - chr3_4:2139980-2139999 Msa0484680:intron 35.0%
!!! GCCACATATGGTTTTAGTTT+TGG - chr3_4:2140091-2140110 Msa0484680:intron 35.0%
TTCAAAAGCGGGTAAGAAAA+TGG + chr3_4:2140135-2140154 None:intergenic 35.0%
AACCAACCAAGATTCAAAAG+CGG + chr3_4:2140147-2140166 None:intergenic 35.0%
TCCCAAAAGTTGTCACAAAA+AGG + chr3_4:2140208-2140227 None:intergenic 35.0%
CAATGAGAATATGAGAGAGA+CGG - chr3_4:2140298-2140317 Msa0484680:intron 35.0%
! AACCATTTTGTGACAACCTT+TGG + chr3_4:2140328-2140347 None:intergenic 35.0%
GTGTATGGATAAAATTCGGT+TGG - chr3_4:2140503-2140522 Msa0484680:intron 35.0%
TTCTTGGGTTACCATGATAT+TGG + chr3_4:2140610-2140629 None:intergenic 35.0%
! ACATGCATGTATTCGTTTTG+TGG - chr3_4:2140672-2140691 Msa0484680:intron 35.0%
!!! CCTTTAGGATATTTTCTACG+TGG + chr3_4:2140871-2140890 None:intergenic 35.0%
CCACGTAGAAAATATCCTAA+AGG - chr3_4:2140868-2140887 Msa0484680:intron 35.0%
GTAGAAAATATCCTAAAGGG+TGG - chr3_4:2140872-2140891 Msa0484680:intron 35.0%
TGTATCAAATACCACCCTTT+AGG + chr3_4:2140886-2140905 None:intergenic 35.0%
GTGGTATTTGATACAGTTGT+TGG - chr3_4:2140891-2140910 Msa0484680:intron 35.0%
GTATTTGATACAGTTGTTGG+TGG - chr3_4:2140894-2140913 Msa0484680:intron 35.0%
! TCAATGCCAATTTTCCCTAT+TGG + chr3_4:2141117-2141136 None:intergenic 35.0%
GAAAGAAATACCTGAGAAGA+AGG - chr3_4:2141185-2141204 Msa0484680:intron 35.0%
!! TCACAACAAACCTTTTGGAA+CGG + chr3_4:2141310-2141329 None:intergenic 35.0%
! TTTAAAACTGCAGTAGCTGT+GGG + chr3_4:2141440-2141459 None:intergenic 35.0%
!!! GCTACTGCAGTTTTAAAGTA+CGG - chr3_4:2141443-2141462 Msa0484680:intron 35.0%
TACCCAACCAAATAATAACG+TGG - chr3_4:2141514-2141533 Msa0484680:CDS 35.0%
ATGCATTCCAGTTAAAGTTG+TGG + chr3_4:2141641-2141660 None:intergenic 35.0%
ATCAGATTTAGGAAGATGAG+AGG + chr3_4:2141719-2141738 None:intergenic 35.0%
TTTGCAAATTGCTCCATTGT+TGG - chr3_4:2141757-2141776 Msa0484680:intron 35.0%
GCATGAATGTGAGTTTAATG+TGG - chr3_4:2141779-2141798 Msa0484680:intron 35.0%
AGTTTAATGTGGAACTCTGT+CGG - chr3_4:2141790-2141809 Msa0484680:intron 35.0%
! TCAGGTAAAATTTGGGCTTT+TGG - chr3_4:2141819-2141838 Msa0484680:CDS 35.0%
! AATACTAAGCTTTGTATCCC+TGG + chr3_4:2141989-2142008 None:intergenic 35.0%
!!! AGTATTATCTTGGTTTTGGC+TGG - chr3_4:2142003-2142022 Msa0484680:intron 35.0%
! ATTTGATTTCCATGTCACCA+AGG - chr3_4:2142184-2142203 Msa0484680:intron 35.0%
TTACTTATCTTGAACAGCCT+TGG + chr3_4:2142204-2142223 None:intergenic 35.0%
TGATGAAAATGGAGAGAAAC+AGG + chr3_4:2142344-2142363 None:intergenic 35.0%
!! GAACTCTTCCTCTTTTGTTT+GGG - chr3_4:2142397-2142416 Msa0484680:intron 35.0%
! AGTATGTGCATTTTCTTCAG+AGG - chr3_4:2142471-2142490 Msa0484680:intron 35.0%
AATATTGAGAATTGATCCCC+AGG - chr3_4:2142810-2142829 Msa0484680:intron 35.0%
AACTAGGCTATAGTAAACCT+GGG + chr3_4:2142830-2142849 None:intergenic 35.0%
AAACTAGGCTATAGTAAACC+TGG + chr3_4:2142831-2142850 None:intergenic 35.0%
! CTGTAAGTAGCATTTGAAGT+AGG - chr3_4:2142988-2143007 Msa0484680:intron 35.0%
CCTCTTCAAAGAGACTTAAA+AGG + chr3_4:2143081-2143100 None:intergenic 35.0%
!! CCTTTTAAGTCTCTTTGAAG+AGG - chr3_4:2143078-2143097 Msa0484680:intron 35.0%
! TTTAAGTCTCTTTGAAGAGG+TGG - chr3_4:2143081-2143100 Msa0484680:intron 35.0%
TTGTATAAACCTGTACTGCT+TGG - chr3_4:2143216-2143235 Msa0484680:intron 35.0%
TGTATAAACCTGTACTGCTT+GGG - chr3_4:2143217-2143236 Msa0484680:intron 35.0%
!!! CAAGTGTTTTTAGGCTAGAT+TGG + chr3_4:2143325-2143344 None:intergenic 35.0%
CTAAGAACGTAAGATCTATG+AGG - chr3_4:2143366-2143385 Msa0484680:intron 35.0%
GTTATCATGCTCAAATCTAG+TGG - chr3_4:2143393-2143412 Msa0484680:intron 35.0%
CTAAGTAAAATCTTCATCGC+AGG + chr3_4:2143456-2143475 None:intergenic 35.0%
! CCCCATATATAATTTCTGGA+AGG - chr3_4:2143514-2143533 Msa0484680:intron 35.0%
TGCTTCTACAATGATTTCCT+GGG - chr3_4:2143569-2143588 Msa0484680:CDS 35.0%
! TCATTTTCAGAGAGAGAAAC+AGG + chr3_4:2143930-2143949 None:intergenic 35.0%
ATTCACCTTAGAAAAAAGGG+AGG - chr3_4:2143957-2143976 Msa0484680:intron 35.0%
CATAAATGGGTATGCGTATT+TGG + chr3_4:2143985-2144004 None:intergenic 35.0%
ACTATTCTGGTCCTATTCAT+GGG - chr3_4:2144220-2144239 Msa0484680:intron 35.0%
AGAAAATGAACCCCATGAAT+AGG + chr3_4:2144234-2144253 None:intergenic 35.0%
! TTCATGGGGTTCATTTTCTT+TGG - chr3_4:2144235-2144254 Msa0484680:intron 35.0%
!!! TCTACATGTTGTTTTAGGCA+TGG - chr3_4:2144273-2144292 Msa0484680:intron 35.0%
! TTGTGTTTTACTGGTAGGAA+GGG + chr3_4:2144374-2144393 None:intergenic 35.0%
! AAACTTTTGGTGAAGTGCAT+AGG - chr3_4:2144470-2144489 Msa0484680:intron 35.0%
AATGAATCAGCTTGCCTAAA+GGG + chr3_4:2144507-2144526 None:intergenic 35.0%
AAATGAATCAGCTTGCCTAA+AGG + chr3_4:2144508-2144527 None:intergenic 35.0%
AATAATTGGGAATTCCCTCA+AGG + chr3_4:2144540-2144559 None:intergenic 35.0%
! TATCTCTGCCTTTTGTGTTA+AGG - chr3_4:2144577-2144596 Msa0484680:intron 35.0%
GTGTTAAGGAATTGTTTGAG+AGG - chr3_4:2144591-2144610 Msa0484680:intron 35.0%
!!! GACAACTCTTATTTTGGAAG+AGG - chr3_4:2144624-2144643 Msa0484680:five_prime_UTR 35.0%
GCTAACCATGAAGACAAAAA+TGG + chr3_4:2144717-2144736 None:intergenic 35.0%
TGATAACTGACTGCATTGTT+GGG - chr3_4:2144757-2144776 Msa0484680:five_prime_UTR 35.0%
AGGGTTATGCTAACTATGTT+AGG - chr3_4:2144922-2144941 Msa0484680:five_prime_UTR 35.0%
CTAATTGAGATGCAAGAAGC+AGG - chr3_4:2138709-2138728 Msa0484680:three_prime_UTR 40.0%
ATCGAAGAAATGTGAGTTGC+GGG + chr3_4:2138804-2138823 None:intergenic 40.0%
GATCGAAGAAATGTGAGTTG+CGG + chr3_4:2138805-2138824 None:intergenic 40.0%
!!! GGGGTTTGAGTTTGGTTTTA+AGG + chr3_4:2138875-2138894 None:intergenic 40.0%
!! AATGAGTTTGTTGAGTTGCG+GGG + chr3_4:2138896-2138915 None:intergenic 40.0%
!! GAATGAGTTTGTTGAGTTGC+GGG + chr3_4:2138897-2138916 None:intergenic 40.0%
TGTGAAGGAACTAAACGACT+CGG + chr3_4:2139007-2139026 None:intergenic 40.0%
TTAGTTCCTTCACACATCAC+AGG - chr3_4:2139013-2139032 Msa0484680:three_prime_UTR 40.0%
AACAAACCTGTGATGTGTGA+AGG + chr3_4:2139022-2139041 None:intergenic 40.0%
TTCTTAATTCTTAGGGACCG+TGG - chr3_4:2139108-2139127 Msa0484680:three_prime_UTR 40.0%
CAATCCAAAACACAGATCCA+CGG + chr3_4:2139128-2139147 None:intergenic 40.0%
! TTTTAGTCCTTGAATGTGCG+AGG + chr3_4:2139623-2139642 None:intergenic 40.0%
CAATATGTCATCTGCAAGCA+AGG - chr3_4:2139979-2139998 Msa0484680:intron 40.0%
TTTAACGTCGTTACGTCTGT+GGG - chr3_4:2140040-2140059 Msa0484680:intron 40.0%
AAAACCATATGTGGCCATCA+GGG + chr3_4:2140086-2140105 None:intergenic 40.0%
TAAAACCATATGTGGCCATC+AGG + chr3_4:2140087-2140106 None:intergenic 40.0%
!! TCTTACCCGCTTTTGAATCT+TGG - chr3_4:2140138-2140157 Msa0484680:intron 40.0%
ACCAACCAAGATTCAAAAGC+GGG + chr3_4:2140146-2140165 None:intergenic 40.0%
GTCCAAAGGTTGTCACAAAA+TGG - chr3_4:2140323-2140342 Msa0484680:intron 40.0%
ATGGATAAAATTCGGTTGGG+AGG - chr3_4:2140507-2140526 Msa0484680:intron 40.0%
TGGATAAAATTCGGTTGGGA+GGG - chr3_4:2140508-2140527 Msa0484680:intron 40.0%
AGCTTTGCTTGCATTACCTT+TGG - chr3_4:2140782-2140801 Msa0484680:intron 40.0%
GCTTTGCTTGCATTACCTTT+GGG - chr3_4:2140783-2140802 Msa0484680:intron 40.0%
CTTTGCTTGCATTACCTTTG+GGG - chr3_4:2140784-2140803 Msa0484680:intron 40.0%
!! GGATGCATTTTTCAAATCCG+AGG + chr3_4:2141069-2141088 None:intergenic 40.0%
! GCACATTTCCCTCAGATTTT+TGG + chr3_4:2141278-2141297 None:intergenic 40.0%
!!! CGATTTTTTCCCGTTCCAAA+AGG - chr3_4:2141297-2141316 Msa0484680:intron 40.0%
!!! CACAACAAACCTTTTGGAAC+GGG + chr3_4:2141309-2141328 None:intergenic 40.0%
! AGGCATTTAGACTTTTCGCT+AGG - chr3_4:2141340-2141359 Msa0484680:intron 40.0%
!! CTTTAAAACTGCAGTAGCTG+TGG + chr3_4:2141441-2141460 None:intergenic 40.0%
TATGCAGCCACAACTTTAAC+TGG - chr3_4:2141631-2141650 Msa0484680:CDS 40.0%
TTTAAGAACGACCGTCAACA+AGG + chr3_4:2141677-2141696 None:intergenic 40.0%
ATTTAGGAAGATGAGAGGTC+TGG + chr3_4:2141714-2141733 None:intergenic 40.0%
ACTCACATTCATGCCAACAA+TGG + chr3_4:2141773-2141792 None:intergenic 40.0%
TTGTCTCCTAGAGGTTGTAT+TGG - chr3_4:2141948-2141967 Msa0484680:CDS 40.0%
CATTGTCCAATACAACCTCT+AGG + chr3_4:2141957-2141976 None:intergenic 40.0%
CTATCTCCCAACTAAGATTC+AGG + chr3_4:2142154-2142173 None:intergenic 40.0%
! CGAACTCTTCCTCTTTTGTT+TGG - chr3_4:2142396-2142415 Msa0484680:intron 40.0%
TCAGCCAATAGTCCATAAAG+GGG + chr3_4:2142571-2142590 None:intergenic 40.0%
GTCAGCCAATAGTCCATAAA+GGG + chr3_4:2142572-2142591 None:intergenic 40.0%
TGTCAGCCAATAGTCCATAA+AGG + chr3_4:2142573-2142592 None:intergenic 40.0%
TAGACTGCCCTTTCTTTCAT+AGG - chr3_4:2142710-2142729 Msa0484680:intron 40.0%
ACTAGGCTATAGTAAACCTG+GGG + chr3_4:2142829-2142848 None:intergenic 40.0%
!! TCCAAATTTGCTGGTTGTCT+AGG - chr3_4:2142959-2142978 Msa0484680:intron 40.0%
TCCTAGACAACCAGCAAATT+TGG + chr3_4:2142963-2142982 None:intergenic 40.0%
AACGTAAGATCTATGAGGTC+TGG - chr3_4:2143371-2143390 Msa0484680:intron 40.0%
CTCCCCCCATATATAATTTC+TGG - chr3_4:2143510-2143529 Msa0484680:intron 40.0%
GAAGCAGAATTGGCAAATCA+GGG + chr3_4:2143555-2143574 None:intergenic 40.0%
AGAAGCAGAATTGGCAAATC+AGG + chr3_4:2143556-2143575 None:intergenic 40.0%
CTGCTTCTACAATGATTTCC+TGG - chr3_4:2143568-2143587 Msa0484680:CDS 40.0%
GCTTCTACAATGATTTCCTG+GGG - chr3_4:2143570-2143589 Msa0484680:CDS 40.0%
!! TTCTAAGGTATGCCAAGGAT+GGG + chr3_4:2143746-2143765 None:intergenic 40.0%
!! TATGGTTCTAAGGTATGCCA+AGG + chr3_4:2143751-2143770 None:intergenic 40.0%
TTTGTCCTATGGCAAAGGAT+AGG + chr3_4:2143820-2143839 None:intergenic 40.0%
GAGAAACTGTTTACTGTGCA+TGG - chr3_4:2143875-2143894 Msa0484680:intron 40.0%
!!! TGGATCCTCCCTTTTTTCTA+AGG + chr3_4:2143965-2143984 None:intergenic 40.0%
TTATTAAGCTGATCTGCTCC+TGG - chr3_4:2144080-2144099 Msa0484680:intron 40.0%
! CATCTGCATTGGTAGGTTTA+CGG - chr3_4:2144165-2144184 Msa0484680:intron 40.0%
GAATAGTCTTCATATGGCCA+AGG + chr3_4:2144207-2144226 None:intergenic 40.0%
TGGCCATATGAAGACTATTC+TGG - chr3_4:2144207-2144226 Msa0484680:intron 40.0%
GGACCAGAATAGTCTTCATA+TGG + chr3_4:2144213-2144232 None:intergenic 40.0%
GACTATTCTGGTCCTATTCA+TGG - chr3_4:2144219-2144238 Msa0484680:intron 40.0%
CTATTCTGGTCCTATTCATG+GGG - chr3_4:2144221-2144240 Msa0484680:intron 40.0%
TTGCAATTGCGGGAATGATT+TGG - chr3_4:2144299-2144318 Msa0484680:intron 40.0%
!! ATTGCGGGAATGATTTGGTA+TGG - chr3_4:2144304-2144323 Msa0484680:intron 40.0%
! CTTGTGTTTTACTGGTAGGA+AGG + chr3_4:2144375-2144394 None:intergenic 40.0%
!! GAGGAGGACAACTCTTATTT+TGG - chr3_4:2144618-2144637 Msa0484680:five_prime_UTR 40.0%
CTGATAACTGACTGCATTGT+TGG - chr3_4:2144756-2144775 Msa0484680:five_prime_UTR 40.0%
GATAACTGACTGCATTGTTG+GGG - chr3_4:2144758-2144777 Msa0484680:five_prime_UTR 40.0%
ATAACTGACTGCATTGTTGG+GGG - chr3_4:2144759-2144778 Msa0484680:five_prime_UTR 40.0%
TCGAAGAAATGTGAGTTGCG+GGG + chr3_4:2138803-2138822 None:intergenic 45.0%
!! ATGAGTTTGTTGAGTTGCGG+GGG + chr3_4:2138895-2138914 None:intergenic 45.0%
CATTTAGGGACCATAGTGAC+AGG - chr3_4:2139596-2139615 Msa0484680:intron 45.0%
AAATCGTTTGTGGAGTGGGT+TGG - chr3_4:2139825-2139844 Msa0484680:intron 45.0%
! AATCGTTTGTGGAGTGGGTT+GGG - chr3_4:2139826-2139845 Msa0484680:intron 45.0%
! ACCACAAGTTCAAAAGCGCA+CGG + chr3_4:2139916-2139935 None:intergenic 45.0%
GTTTAACGTCGTTACGTCTG+TGG - chr3_4:2140039-2140058 Msa0484680:intron 45.0%
!! ACCCGCTTTTGAATCTTGGT+TGG - chr3_4:2140142-2140161 Msa0484680:intron 45.0%
CACTTGGACCAATCCATTGT+TGG + chr3_4:2140429-2140448 None:intergenic 45.0%
!! CAACAATGGATTGGTCCAAG+TGG - chr3_4:2140427-2140446 Msa0484680:intron 45.0%
!! ATGGATTGGTCCAAGTGGTA+AGG - chr3_4:2140432-2140451 Msa0484680:intron 45.0%
!! TGGATTGGTCCAAGTGGTAA+GGG - chr3_4:2140433-2140452 Msa0484680:intron 45.0%
AACCCCTTAAGCATGTGATC+AGG - chr3_4:2140461-2140480 Msa0484680:intron 45.0%
ACCCCTTAAGCATGTGATCA+GGG - chr3_4:2140462-2140481 Msa0484680:intron 45.0%
ACCCCTGATCACATGCTTAA+GGG + chr3_4:2140467-2140486 None:intergenic 45.0%
AACCCCTGATCACATGCTTA+AGG + chr3_4:2140468-2140487 None:intergenic 45.0%
TTTATCCATACACGTGAGCC+AGG + chr3_4:2140496-2140515 None:intergenic 45.0%
GGATAAAATTCGGTTGGGAG+GGG - chr3_4:2140509-2140528 Msa0484680:intron 45.0%
GATAAAATTCGGTTGGGAGG+GGG - chr3_4:2140510-2140529 Msa0484680:intron 45.0%
TAGCAGTGACTAATCTCCGT+CGG + chr3_4:2140566-2140585 None:intergenic 45.0%
! GATTAGTCACTGCTAAGCAG+CGG - chr3_4:2140571-2140590 Msa0484680:intron 45.0%
! GCTGTCGATTGTACTGTATC+TGG - chr3_4:2141007-2141026 Msa0484680:CDS 45.0%
TGCTAGCATACCTTCTTCTC+AGG + chr3_4:2141198-2141217 None:intergenic 45.0%
TGCCACAACAACCTTGTTGA+CGG - chr3_4:2141663-2141682 Msa0484680:CDS 45.0%
ACGGTCGTTCTTAAATCGCT+GGG - chr3_4:2141682-2141701 Msa0484680:CDS 45.0%
!! GAACTCTGTCGGTTTCTATC+AGG - chr3_4:2141801-2141820 Msa0484680:intron 45.0%
! CCTCTAGGAGACAAGATACT+GGG + chr3_4:2141942-2141961 None:intergenic 45.0%
! ACCTCTAGGAGACAAGATAC+TGG + chr3_4:2141943-2141962 None:intergenic 45.0%
TGGACAATGTGCGATATTCC+AGG - chr3_4:2141968-2141987 Msa0484680:CDS 45.0%
GGACAATGTGCGATATTCCA+GGG - chr3_4:2141969-2141988 Msa0484680:CDS 45.0%
TGATGTCAGCGTCAATGCTA+AGG - chr3_4:2142047-2142066 Msa0484680:intron 45.0%
GATGTCAGCGTCAATGCTAA+GGG - chr3_4:2142048-2142067 Msa0484680:intron 45.0%
ACGAGAAGCCCAAACAAAAG+AGG + chr3_4:2142408-2142427 None:intergenic 45.0%
!! TCTCGTGCTCTAGGTTTTAC+AGG - chr3_4:2142422-2142441 Msa0484680:intron 45.0%
!! CTCGTGCTCTAGGTTTTACA+GGG - chr3_4:2142423-2142442 Msa0484680:intron 45.0%
GCAGCAAGTTTACTGCTAGT+AGG - chr3_4:2142545-2142564 Msa0484680:intron 45.0%
! TAGGCCCCTTTATGGACTAT+TGG - chr3_4:2142564-2142583 Msa0484680:intron 45.0%
CACGCAAGCACACATTATAC+AGG + chr3_4:2142785-2142804 None:intergenic 45.0%
CTGTATAATGTGTGCTTGCG+TGG - chr3_4:2142783-2142802 Msa0484680:intron 45.0%
ACACTACTTCACAACCGACT+CGG - chr3_4:2142866-2142885 Msa0484680:intron 45.0%
GGGCATGAATGGAAGTTAAC+TGG + chr3_4:2143027-2143046 None:intergenic 45.0%
! AAGTCTCTTTGAAGAGGTGG+AGG - chr3_4:2143084-2143103 Msa0484680:intron 45.0%
! ATTATATATGGGGGGAGCAC+AGG + chr3_4:2143507-2143526 None:intergenic 45.0%
TCATGCAACATCATAACCCC+AGG + chr3_4:2143589-2143608 None:intergenic 45.0%
!! GTTCTAAGGTATGCCAAGGA+TGG + chr3_4:2143747-2143766 None:intergenic 45.0%
GAGTGTTTGTCCTATGGCAA+AGG + chr3_4:2143825-2143844 None:intergenic 45.0%
ACCTACCAATGCAGATGAAC+TGG + chr3_4:2144162-2144181 None:intergenic 45.0%
GCCAAGGACTTGGAATGATA+CGG + chr3_4:2144191-2144210 None:intergenic 45.0%
TCTTCATATGGCCAAGGACT+TGG + chr3_4:2144201-2144220 None:intergenic 45.0%
AGGCATGGCAATTGCAATTG+CGG - chr3_4:2144288-2144307 Msa0484680:intron 45.0%
GCAATGCTTCTTCTAAGCCA+GGG - chr3_4:2144326-2144345 Msa0484680:intron 45.0%
CAATGCTTCTTCTAAGCCAG+GGG - chr3_4:2144327-2144346 Msa0484680:intron 45.0%
AATGCTTCTTCTAAGCCAGG+GGG - chr3_4:2144328-2144347 Msa0484680:intron 45.0%
TGGTAGGAAGGGAAAAGCTA+CGG + chr3_4:2144363-2144382 None:intergenic 45.0%
!! TACCTTCTCAACTGATTCGG+AGG + chr3_4:2144419-2144438 None:intergenic 45.0%
AGGAAAATCATGCGCCCTTT+AGG - chr3_4:2144490-2144509 Msa0484680:intron 45.0%
GAATTGTTTGAGAGGGAGAG+AGG - chr3_4:2144599-2144618 Msa0484680:five_prime_UTR 45.0%
ATTGTTGGGGGTTCACATGT+TGG - chr3_4:2144771-2144790 Msa0484680:five_prime_UTR 45.0%
TCACATGTTGGAATCTCTGC+TGG - chr3_4:2144783-2144802 Msa0484680:five_prime_UTR 45.0%
ACTCTAACAAGTGCCCTTGA+AGG - chr3_4:2144887-2144906 Msa0484680:five_prime_UTR 45.0%
!! AATATCTATTATAAAAAAAT+TGG + chr3_4:2144665-2144684 None:intergenic 5.0%
!! TGAGTTTGTTGAGTTGCGGG+GGG + chr3_4:2138894-2138913 None:intergenic 50.0%
! AGAAGAACGCGACGTCGTTT+TGG + chr3_4:2138979-2138998 None:intergenic 50.0%
!! ATCGTTTGTGGAGTGGGTTG+GGG - chr3_4:2139827-2139846 Msa0484680:intron 50.0%
CATCTGCAAGCAAGGGTGAT+AGG - chr3_4:2139987-2140006 Msa0484680:intron 50.0%
TGCAAGCAAGGGTGATAGGA+AGG - chr3_4:2139991-2140010 Msa0484680:intron 50.0%
CAACCACGATGCTGCATCAA+GGG + chr3_4:2140020-2140039 None:intergenic 50.0%
ACAACCACGATGCTGCATCA+AGG + chr3_4:2140021-2140040 None:intergenic 50.0%
!! CCATCAGGGCTTTGTTCACA+AGG + chr3_4:2140072-2140091 None:intergenic 50.0%
CCTTGTGAACAAAGCCCTGA+TGG - chr3_4:2140069-2140088 Msa0484680:intron 50.0%
AAAGCCCTGATGGCCACATA+TGG - chr3_4:2140079-2140098 Msa0484680:intron 50.0%
TGAGAGAGACGGTTGTCCAA+AGG - chr3_4:2140309-2140328 Msa0484680:intron 50.0%
GGTTCAAGTCCCTTACCACT+TGG + chr3_4:2140445-2140464 None:intergenic 50.0%
CCCCTGATCACATGCTTAAG+GGG + chr3_4:2140466-2140485 None:intergenic 50.0%
CCCCTTAAGCATGTGATCAG+GGG - chr3_4:2140463-2140482 Msa0484680:intron 50.0%
GTGATCAGGGGTTTGATTCC+TGG - chr3_4:2140475-2140494 Msa0484680:intron 50.0%
TGATTCCTGGCTCACGTGTA+TGG - chr3_4:2140488-2140507 Msa0484680:intron 50.0%
AGCAGTGACTAATCTCCGTC+GGG + chr3_4:2140565-2140584 None:intergenic 50.0%
CAGCAGAATCAGTACCCCAA+AGG + chr3_4:2140801-2140820 None:intergenic 50.0%
GACCGTCAACAAGGTTGTTG+TGG + chr3_4:2141668-2141687 None:intergenic 50.0%
GACGGTCGTTCTTAAATCGC+TGG - chr3_4:2141681-2141700 Msa0484680:CDS 50.0%
CCCAGTATCTTGTCTCCTAG+AGG - chr3_4:2141939-2141958 Msa0484680:CDS 50.0%
!!! CTTGGTTTTGGCTGGTGTTG+CGG - chr3_4:2142011-2142030 Msa0484680:intron 50.0%
! CTTGAACAGCCTTGGTGACA+TGG + chr3_4:2142196-2142215 None:intergenic 50.0%
!! AGTAAACTTGCTGCCTGTGC+TGG + chr3_4:2142539-2142558 None:intergenic 50.0%
ACTGCTAGTAGGCCCCTTTA+TGG - chr3_4:2142556-2142575 Msa0484680:intron 50.0%
! CGAGTTGACGCATACGACTA+TGG - chr3_4:2142599-2142618 Msa0484680:intron 50.0%
GCTAATGTCCCAAGCAGTAC+AGG + chr3_4:2143228-2143247 None:intergenic 50.0%
AATTTGTGTGGGCCCATCCT+TGG - chr3_4:2143731-2143750 Msa0484680:intron 50.0%
TGGGTCCTATCCTTTGCCAT+AGG - chr3_4:2143812-2143831 Msa0484680:intron 50.0%
GATGAACAACTGCAGACACC+AGG + chr3_4:2144101-2144120 None:intergenic 50.0%
CTGTCTTGCACTATCGCAGT+AGG - chr3_4:2144124-2144143 Msa0484680:intron 50.0%
CTCAGCCAGTTCATCTGCAT+TGG - chr3_4:2144154-2144173 Msa0484680:intron 50.0%
! GCCAGTTCATCTGCATTGGT+AGG - chr3_4:2144158-2144177 Msa0484680:intron 50.0%
GCCGTATCATTCCAAGTCCT+TGG - chr3_4:2144187-2144206 Msa0484680:intron 50.0%
GGCATGGCAATTGCAATTGC+GGG - chr3_4:2144289-2144308 Msa0484680:intron 50.0%
GGCAATGCTTCTTCTAAGCC+AGG - chr3_4:2144325-2144344 Msa0484680:intron 50.0%
TTCTTCTAAGCCAGGGGGTA+AGG - chr3_4:2144333-2144352 Msa0484680:intron 50.0%
!! TCAACTGATTCGGAGGACAC+AGG + chr3_4:2144412-2144431 None:intergenic 50.0%
GTCCTCCGAATCAGTTGAGA+AGG - chr3_4:2144414-2144433 Msa0484680:intron 50.0%
TTGTTTGAGAGGGAGAGAGG+AGG - chr3_4:2144602-2144621 Msa0484680:five_prime_UTR 50.0%
! AGTTGCGGGGGGTTTGAGTT+TGG + chr3_4:2138883-2138902 None:intergenic 55.0%
! GGGACCGTGGATCTGTGTTT+TGG - chr3_4:2139121-2139140 Msa0484680:three_prime_UTR 55.0%
TGTGCGAGGTCCTGTCACTA+TGG + chr3_4:2139609-2139628 None:intergenic 55.0%
GACAGGACCTCGCACATTCA+AGG - chr3_4:2139613-2139632 Msa0484680:intron 55.0%
AGCGCACGGCTTTACCTGTA+TGG + chr3_4:2139902-2139921 None:intergenic 55.0%
! GCCGTGCGCTTTTGAACTTG+TGG - chr3_4:2139912-2139931 Msa0484680:intron 55.0%
CTTCCCTTGATGCAGCATCG+TGG - chr3_4:2140014-2140033 Msa0484680:intron 55.0%
GTTTGGGCTTCTCGTGCTCT+AGG - chr3_4:2142413-2142432 Msa0484680:intron 55.0%
AACCCACCTTGTGTGCCCCA+CGG - chr3_4:2140535-2140554 Msa0484680:intron 60.0%
ATCTCCGTCGGGAAACCCGT+GGG + chr3_4:2140554-2140573 None:intergenic 60.0%
AATCTCCGTCGGGAAACCCG+TGG + chr3_4:2140555-2140574 None:intergenic 60.0%
ACCCACCTTGTGTGCCCCAC+GGG - chr3_4:2140536-2140555 Msa0484680:intron 65.0%
ACCCGTGGGGCACACAAGGT+GGG + chr3_4:2140540-2140559 None:intergenic 65.0%
AACCCGTGGGGCACACAAGG+TGG + chr3_4:2140541-2140560 None:intergenic 65.0%
GGAAACCCGTGGGGCACACA+AGG + chr3_4:2140544-2140563 None:intergenic 65.0%
TCTCCGTCGGGAAACCCGTG+GGG + chr3_4:2140553-2140572 None:intergenic 65.0%
! CTGCCTGTGCTGGTGCAGTG+TGG + chr3_4:2142529-2142548 None:intergenic 65.0%
GTGCCCCACGGGTTTCCCGA+CGG - chr3_4:2140547-2140566 Msa0484680:intron 70.0%
GGGCCACACTGCACCAGCAC+AGG - chr3_4:2142523-2142542 Msa0484680:intron 70.0%
CTACGGCGCTCCTTACCCCC+TGG + chr3_4:2144346-2144365 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 2138679 2144950 2138679 ID=Msa0484680;Name=Msa0484680
chr3_4 mRNA 2138679 2144950 2138679 ID=Msa0484680-mRNA-1;Parent=Msa0484680;Name=Msa0484680-mRNA-1;_AED=0.22;_eAED=0.22;_QI=432|1|1|1|0.8|0.66|6|509|335
chr3_4 exon 2138679 2139517 2138679 ID=Msa0484680-mRNA-1:exon:725;Parent=Msa0484680-mRNA-1
chr3_4 exon 2140995 2141156 2140995 ID=Msa0484680-mRNA-1:exon:724;Parent=Msa0484680-mRNA-1
chr3_4 exon 2141510 2141710 2141510 ID=Msa0484680-mRNA-1:exon:723;Parent=Msa0484680-mRNA-1
chr3_4 exon 2141807 2141991 2141807 ID=Msa0484680-mRNA-1:exon:722;Parent=Msa0484680-mRNA-1
chr3_4 exon 2143517 2143722 2143517 ID=Msa0484680-mRNA-1:exon:721;Parent=Msa0484680-mRNA-1
chr3_4 exon 2144595 2144950 2144595 ID=Msa0484680-mRNA-1:exon:720;Parent=Msa0484680-mRNA-1
chr3_4 five_prime_UTR 2144595 2144950 2144595 ID=Msa0484680-mRNA-1:five_prime_utr;Parent=Msa0484680-mRNA-1
chr3_4 five_prime_UTR 2143647 2143722 2143647 ID=Msa0484680-mRNA-1:five_prime_utr;Parent=Msa0484680-mRNA-1
chr3_4 CDS 2143517 2143646 2143517 ID=Msa0484680-mRNA-1:cds;Parent=Msa0484680-mRNA-1
chr3_4 CDS 2141807 2141991 2141807 ID=Msa0484680-mRNA-1:cds;Parent=Msa0484680-mRNA-1
chr3_4 CDS 2141510 2141710 2141510 ID=Msa0484680-mRNA-1:cds;Parent=Msa0484680-mRNA-1
chr3_4 CDS 2140995 2141156 2140995 ID=Msa0484680-mRNA-1:cds;Parent=Msa0484680-mRNA-1
chr3_4 CDS 2139188 2139517 2139188 ID=Msa0484680-mRNA-1:cds;Parent=Msa0484680-mRNA-1
chr3_4 three_prime_UTR 2138679 2139187 2138679 ID=Msa0484680-mRNA-1:three_prime_utr;Parent=Msa0484680-mRNA-1
Gene Sequence

>Msa0484680

ATGTCATCTGCAAGCAAGGGTGATAGGAAGGCTTCCCTTGATGCAGCATCGTGGTTGTTTAACGTCGTTACGTCTGTGGGAATAATCCTTGTGAACAAAGCCCTGATGGCCACATATGGTTTTAGTTTTGCCACAACTTTAACTGGAATGCATTTTGCCACAACAACCTTGTTGACGGTCGTTCTTAAATCGCTGGGATATATCCAGACCTCTCATCTTCCTAAATCTGATATCATCAAATTTGTCTTGTTTGCAAATTGCTCCATTGTTGGCATGAATGTGAGTTTAATGTGGAACTCTGTCGGTTTCTATCAGATTGCTAAGCTGACTATGATCCCAGTATCTTGTCTCCTAGAGGTTGTATTGGACAATGTGCGATATTCCAGGGATACAAAGCTTAGTATTATCTTGGTTTTGGCTGGTGTTGCGGTCTGTACAGTCACTGATGTCAGCGTCAATGCTAAGGGTTTCATAGCTGCTGTCATAGCAGTTTGTAGCACAGCACTGCAGCAGTATTATGTGCATTTTCTTCAGAGGAAATATTCTATTGGATCATTTAACTTGTTGGGCCACACTGCACCAGCACAGGCAGCAAGTTTACTGCTAGTAGGCCCCTTTATGGACTATTGGCTGACAAACAAACGAGTTGACGCATACGACTATGGCTTGACATCCACTTTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGAACAAATCTCAGCCAGTTCATCTGCATTGGTAGGTTTACGGCCGTATCATTCCAAGTCCTTGGCCATATGAAGACTATTCTGGTCCTATTCATGGGGTTCATTTTCTTTGGAAAAGAGGGCCTCAATCTACATGTTGTTTTAGGCATGGCAATTGCAATTGCGGGAATGATTTGGTATGGCAATGCTTCTTCTAAGCCAGGGGGTAAGGAGCGCCGTAGCTTTTCCCTTCCTACCAGTAAAACACAAGATTATGCTGCGGTGCCTGTGTCCTCCGAATCAGTTGAGAAGGTATAA
Protein sequence

>Msa0484680

MSSASKGDRKASLDAASWLFNVVTSVGIILVNKALMATYGFSFATTLTGMHFATTTLLTVVLKSLGYIQTSHLPKSDIIKFVLFANCSIVGMNVSLMWNSVGFYQIAKLTMIPVSCLLEVVLDNVRYSRDTKLSIILVLAGVAVCTVTDVSVNAKGFIAAVIAVCSTALQQYYVHFLQRKYSIGSFNLLGHTAPAQAASLLLVGPFMDYWLTNKRVDAYDYGLTSTLFIILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLFMGFIFFGKEGLNLHVVLGMAIAIAGMIWYGNASSKPGGKERRSFSLPTSKTQDYAAVPVSSESVEKV*