AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1385860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1385860 MtrunA17_Chr3g0129401 99.701 335 1 0 1 335 1 335 0.0 679
Msa1385860 MtrunA17_Chr8g0383381 81.548 336 59 1 1 333 1 336 0.0 558
Msa1385860 MtrunA17_Chr1g0201531 78.505 321 67 1 1 321 1 319 0.0 514
Msa1385860 MtrunA17_Chr5g0393381 50.974 308 146 4 9 312 8 314 2.41e-94 284
Msa1385860 MtrunA17_Chr1g0157501 51.456 309 139 4 16 319 14 316 4.98e-94 283
Msa1385860 MtrunA17_Chr6g0467391 39.535 301 180 2 10 309 6 305 7.67e-61 197
Msa1385860 MtrunA17_Chr6g0467371 39.535 301 180 2 10 309 6 305 7.67e-61 197
Msa1385860 MtrunA17_Chr2g0326791 37.700 313 193 2 16 327 13 324 1.73e-60 197
Msa1385860 MtrunA17_Chr4g0028931 36.333 300 189 2 10 308 6 304 3.69e-55 183
Msa1385860 MtrunA17_Chr3g0128951 37.218 266 166 1 32 297 29 293 1.45e-54 182
Msa1385860 MtrunA17_Chr3g0128961 34.828 290 166 2 32 299 29 317 1.73e-51 174
Msa1385860 MtrunA17_Chr2g0298931 29.721 323 213 5 4 318 45 361 4.01e-27 109
Msa1385860 MtrunA17_Chr5g0446851 29.260 311 203 7 20 320 62 365 8.92e-23 97.8
Msa1385860 MtrunA17_Chr3g0114581 26.269 335 210 12 18 334 23 338 1.17e-14 73.9
Msa1385860 MtrunA17_Chr1g0160071 24.843 318 214 9 18 320 22 329 1.71e-13 70.5
Msa1385860 MtrunA17_Chr7g0270591 27.622 286 187 10 25 298 26 303 8.27e-13 68.6
Msa1385860 MtrunA17_Chr8g0382081 23.693 287 211 4 24 303 22 307 4.92e-11 62.8
Msa1385860 MtrunA17_Chr2g0312911 26.518 313 206 12 7 303 2 306 8.27e-11 62.4
Msa1385860 MtrunA17_Chr3g0112981 23.390 295 208 5 24 306 35 323 8.40e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1385860 AT4G09810.1 77.246 334 76 0 1 334 1 334 0.0 547
Msa1385860 AT4G39390.3 80.838 334 61 1 2 335 3 333 0.0 535
Msa1385860 AT4G39390.1 80.838 334 61 1 2 335 7 337 0.0 535
Msa1385860 AT4G39390.2 80.838 334 61 1 2 335 7 337 0.0 535
Msa1385860 AT1G34020.2 79.180 317 66 0 18 334 18 334 0.0 532
Msa1385860 AT1G34020.1 79.180 317 66 0 18 334 18 334 0.0 532
Msa1385860 AT1G34020.3 79.180 317 66 0 18 334 18 334 0.0 532
Msa1385860 AT4G09810.2 76.534 277 65 0 58 334 1 277 2.79e-161 452
Msa1385860 AT4G09810.3 80.180 222 44 0 1 222 1 222 3.58e-133 379
Msa1385860 AT1G21070.1 49.107 336 159 6 5 333 4 334 3.30e-99 296
Msa1385860 AT5G42420.1 52.318 302 138 3 4 300 2 302 5.55e-99 296
Msa1385860 AT1G76670.2 47.688 346 159 5 1 335 1 335 3.65e-97 291
Msa1385860 AT1G76670.1 47.688 346 159 5 1 335 1 335 3.65e-97 291
Msa1385860 AT2G28315.1 35.110 319 205 2 16 334 13 329 9.18e-57 187
Msa1385860 AT2G30460.1 38.346 266 163 1 32 297 29 293 2.00e-56 187
Msa1385860 AT2G30460.2 38.346 266 163 1 32 297 29 293 2.00e-56 187
Msa1385860 AT2G28315.2 36.770 291 183 1 21 311 18 307 5.48e-56 185
Msa1385860 AT1G06890.4 36.177 293 182 3 32 321 29 319 2.53e-55 184
Msa1385860 AT1G06890.3 36.177 293 182 3 32 321 29 319 2.54e-55 184
Msa1385860 AT1G06890.2 36.177 293 182 3 32 321 29 319 2.97e-55 184
Msa1385860 AT1G06890.1 36.177 293 182 3 32 321 29 319 2.97e-55 184
Msa1385860 AT2G30460.3 37.008 254 159 1 44 297 20 272 7.99e-50 169
Msa1385860 AT2G30460.6 37.008 254 159 1 44 297 20 272 7.99e-50 169
Msa1385860 AT2G30460.5 37.008 254 159 1 44 297 20 272 7.99e-50 169
Msa1385860 AT5G42420.2 36.027 297 121 11 4 297 2 232 3.38e-38 137
Msa1385860 AT2G30460.4 37.368 190 119 0 32 221 29 218 2.21e-34 129
Msa1385860 AT5G55950.4 30.503 318 198 6 20 321 3 313 1.44e-28 113
Msa1385860 AT5G55950.1 30.503 318 198 6 20 321 63 373 3.13e-28 113
Msa1385860 AT5G55950.3 28.808 302 192 6 36 321 1 295 3.68e-22 95.5
Msa1385860 AT5G57100.1 29.771 262 172 4 20 275 70 325 8.85e-22 95.5
Msa1385860 AT5G55950.2 31.915 235 148 4 20 248 63 291 1.58e-21 93.6
Msa1385860 AT5G57100.2 29.362 235 154 4 20 248 70 298 1.28e-17 82.4
Msa1385860 AT5G57100.3 32.934 167 104 3 20 180 70 234 8.56e-14 70.9
Msa1385860 AT3G10290.1 24.830 294 199 7 24 303 68 353 4.83e-13 69.7
Msa1385860 AT1G21870.1 22.018 327 233 7 18 333 23 338 2.75e-12 67.4
Msa1385860 AT5G04160.1 24.444 315 215 9 2 303 3 307 7.53e-12 65.9
Msa1385860 AT1G77610.1 24.214 318 214 9 18 320 17 322 7.76e-12 65.9

Find 137 sgRNAs with CRISPR-Local

Find 437 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACATGATCTATAAATAAT+TGG 0.151640 tig0020778:-32877 None:intergenic
GAGGAGGACAACTCTTATTT+TGG 0.199062 tig0020778:+32944 Msa1385860:three_prime_UTR
GTGTAATAATTCACTAATTT+AGG 0.230529 tig0020778:-27003 None:intergenic
GTTATTTACACCATAATTAT+TGG 0.234946 tig0020778:-33139 None:intergenic
AAAGGAAGTGATTAAACTTT+TGG 0.242017 tig0020778:+32783 Msa1385860:three_prime_UTR
TATGCAGCCACAACTTTAAC+TGG 0.250967 tig0020778:+29960 Msa1385860:intron
CTTGAAGGAATTTAATATAA+AGG 0.254018 tig0020778:+33228 Msa1385860:three_prime_UTR
ACTGCTAGTAGGCCCCTTTA+TGG 0.271752 tig0020778:+30885 Msa1385860:CDS
GCTTAGTATTATCTTGGTTT+TGG 0.281700 tig0020778:+30328 Msa1385860:CDS
AATTTGATGATATCAGATTT+AGG 0.302073 tig0020778:-30056 None:intergenic
CTTCAGAGGAAATATTCTAT+TGG 0.311098 tig0020778:+30814 Msa1385860:CDS
TTTAAGGAGTTGAATTTAAA+GGG 0.327501 tig0020778:-27171 None:intergenic
CTGATAACTGACTGCATTGT+TGG 0.327915 tig0020778:+33082 Msa1385860:three_prime_UTR
AGAAGAACGCGACGTCGTTT+TGG 0.331994 tig0020778:-27306 None:intergenic
TTGAAGGAATTTAATATAAA+GGG 0.336918 tig0020778:+33229 Msa1385860:three_prime_UTR
TGATAACTGACTGCATTGTT+GGG 0.343052 tig0020778:+33083 Msa1385860:three_prime_UTR
GGCATGGCAATTGCAATTGC+GGG 0.344692 tig0020778:+32615 Msa1385860:CDS
ATCGAAGAAATGTGAGTTGC+GGG 0.345453 tig0020778:-27116 None:intergenic
TATTGGATCATTTAACTTGT+TGG 0.347599 tig0020778:+30831 Msa1385860:CDS
ATTGGATCATTTAACTTGTT+GGG 0.348429 tig0020778:+30832 Msa1385860:CDS
ATTTCTTCGATCTCTGAATC+TGG 0.348494 tig0020778:+27128 Msa1385860:five_prime_UTR
TACAAAGCTTAGTATTATCT+TGG 0.348665 tig0020778:+30322 Msa1385860:CDS
CATCTGCATTGGTAGGTTTA+CGG 0.351694 tig0020778:+32491 Msa1385860:CDS
TTGCAATTGCGGGAATGATT+TGG 0.358279 tig0020778:+32625 Msa1385860:CDS
CGAGTTGACGCATACGACTA+TGG 0.358338 tig0020778:+30928 Msa1385860:CDS
AGGAAAATCATGCGCCCTTT+AGG 0.358491 tig0020778:+32816 Msa1385860:three_prime_UTR
TGGCCATATGAAGACTATTC+TGG 0.359788 tig0020778:+32533 Msa1385860:CDS
GACTATTCTGGTCCTATTCA+TGG 0.375174 tig0020778:+32545 Msa1385860:CDS
GACGGTCGTTCTTAAATCGC+TGG 0.375697 tig0020778:+30010 Msa1385860:CDS
ATAATTATGGTGTAAATAAC+TGG 0.378385 tig0020778:+33142 Msa1385860:three_prime_UTR
CCTGCTTCTTGCATCTCAAT+TGG 0.384722 tig0020778:-27025 None:intergenic
GAACTCTGTCGGTTTCTATC+AGG 0.386221 tig0020778:+30130 Msa1385860:CDS
GAATGAGTTTGTTGAGTTGC+GGG 0.392966 tig0020778:-27210 None:intergenic
TAGGCCCCTTTATGGACTAT+TGG 0.397806 tig0020778:+30893 Msa1385860:CDS
TAAAACCATATGTGGCCATC+AGG 0.399543 tig0020778:-28414 None:intergenic
AGGGTTATGCTAACTATGTT+AGG 0.399722 tig0020778:+33248 Msa1385860:three_prime_UTR
CTTTATATTAAATTCCTTCA+AGG 0.400993 tig0020778:-33227 None:intergenic
TGTCAGCCAATAGTCCATAA+AGG 0.405717 tig0020778:-30899 None:intergenic
AATGAATCAGCTTGCCTAAA+GGG 0.406259 tig0020778:-32830 None:intergenic
AGAGCTTCCAATATTCAAAC+TGG 0.410798 tig0020778:-28282 None:intergenic
AGTAAACTTGCTGCCTGTGC+TGG 0.410997 tig0020778:-30865 None:intergenic
TGGACAATGTGCGATATTCC+AGG 0.411360 tig0020778:+30297 Msa1385860:CDS
TTATACCTTCTCAACTGATT+CGG 0.413865 tig0020778:-32745 None:intergenic
TTGTCTCCTAGAGGTTGTAT+TGG 0.415445 tig0020778:+30277 Msa1385860:CDS
TTTGCAAATTGCTCCATTGT+TGG 0.415613 tig0020778:+30086 Msa1385860:CDS
ACCTCTAGGAGACAAGATAC+TGG 0.420192 tig0020778:-30269 None:intergenic
TCTTCATATGGCCAAGGACT+TGG 0.420217 tig0020778:-32524 None:intergenic
AGAAAATGAACCCCATGAAT+AGG 0.422344 tig0020778:-32557 None:intergenic
TGGTAAGTGACCAATAATTA+TGG 0.422349 tig0020778:+33129 Msa1385860:three_prime_UTR
GTCAGCCAATAGTCCATAAA+GGG 0.423028 tig0020778:-30898 None:intergenic
AACATGATCTATAAATAATT+GGG 0.428104 tig0020778:-32876 None:intergenic
TGCTAACTATGTTAGGCCTC+AGG 0.428657 tig0020778:+33255 Msa1385860:three_prime_UTR
ACAAGAAATTTGTGAGTAAA+CGG 0.429095 tig0020778:-27084 None:intergenic
TGCCACAACAACCTTGTTGA+CGG 0.432184 tig0020778:+29992 Msa1385860:CDS
CATCTGCAAGCAAGGGTGAT+AGG 0.433535 tig0020778:+28317 Msa1385860:CDS
ACCTACCAATGCAGATGAAC+TGG 0.435560 tig0020778:-32485 None:intergenic
ACTCTAACAAGTGCCCTTGA+AGG 0.448083 tig0020778:+33213 Msa1385860:three_prime_UTR
GTTTAACGTCGTTACGTCTG+TGG 0.448334 tig0020778:+28369 Msa1385860:CDS
GGCAATGCTTCTTCTAAGCC+AGG 0.448871 tig0020778:+32651 Msa1385860:CDS
CCATCAGGGCTTTGTTCACA+AGG 0.466439 tig0020778:-28399 None:intergenic
GGACCAGAATAGTCTTCATA+TGG 0.477152 tig0020778:-32536 None:intergenic
AAACAATTCCTTAACACAAA+AGG 0.477553 tig0020778:-32911 None:intergenic
ACTATTCTGGTCCTATTCAT+GGG 0.478886 tig0020778:+32546 Msa1385860:CDS
GAATTGTTTGAGAGGGAGAG+AGG 0.479175 tig0020778:+32925 Msa1385860:three_prime_UTR
AATACTAAGCTTTGTATCCC+TGG 0.480739 tig0020778:-30315 None:intergenic
TTTAACGTCGTTACGTCTGT+GGG 0.489306 tig0020778:+28370 Msa1385860:CDS
AAAGCCCTGATGGCCACATA+TGG 0.489431 tig0020778:+28409 Msa1385860:CDS
GCCGTATCATTCCAAGTCCT+TGG 0.491890 tig0020778:+32513 Msa1385860:CDS
ATTTAGGAAGATGAGAGGTC+TGG 0.493409 tig0020778:-30040 None:intergenic
TGATGTCAGCGTCAATGCTA+AGG 0.502960 tig0020778:+30376 Msa1385860:CDS
TGAATGAGTTTGTTGAGTTG+CGG 0.504450 tig0020778:-27211 None:intergenic
CAATATGTCATCTGCAAGCA+AGG 0.504642 tig0020778:+28309 Msa1385860:exon
AAATGAATCAGCTTGCCTAA+AGG 0.508812 tig0020778:-32831 None:intergenic
ACCAAAACTAAAACCATATG+TGG 0.510874 tig0020778:-28422 None:intergenic
GATAACTGACTGCATTGTTG+GGG 0.513427 tig0020778:+33084 Msa1385860:three_prime_UTR
CTCAGCCAGTTCATCTGCAT+TGG 0.515524 tig0020778:+32480 Msa1385860:CDS
GCCAGTTCATCTGCATTGGT+AGG 0.519406 tig0020778:+32484 Msa1385860:CDS
TCACATGTTGGAATCTCTGC+TGG 0.521974 tig0020778:+33109 Msa1385860:three_prime_UTR
TTTATATTAAATTCCTTCAA+GGG 0.522386 tig0020778:-33226 None:intergenic
AATGAGTTTGTTGAGTTGCG+GGG 0.531496 tig0020778:-27209 None:intergenic
TACCTTCTCAACTGATTCGG+AGG 0.531786 tig0020778:-32742 None:intergenic
CCAATTGAGATGCAAGAAGC+AGG 0.532143 tig0020778:+27025 Msa1385860:five_prime_UTR
GACCGTCAACAAGGTTGTTG+TGG 0.536338 tig0020778:-29994 None:intergenic
GCAATGCTTCTTCTAAGCCA+GGG 0.536976 tig0020778:+32652 Msa1385860:CDS
AGGCATGGCAATTGCAATTG+CGG 0.537999 tig0020778:+32614 Msa1385860:CDS
CAACCACGATGCTGCATCAA+GGG 0.538037 tig0020778:-28347 None:intergenic
TTGTTTGAGAGGGAGAGAGG+AGG 0.539307 tig0020778:+32928 Msa1385860:three_prime_UTR
CCTTGTGAACAAAGCCCTGA+TGG 0.544084 tig0020778:+28399 Msa1385860:CDS
AGTTTAATGTGGAACTCTGT+CGG 0.546444 tig0020778:+30119 Msa1385860:CDS
ACGGTCGTTCTTAAATCGCT+GGG 0.547332 tig0020778:+30011 Msa1385860:CDS
TGTTAAGGAATTGTTTGAGA+GGG 0.555195 tig0020778:+32918 Msa1385860:three_prime_UTR
GCCAAGGACTTGGAATGATA+CGG 0.556173 tig0020778:-32514 None:intergenic
ACAACCACGATGCTGCATCA+AGG 0.557194 tig0020778:-28348 None:intergenic
GGGCCACACTGCACCAGCAC+AGG 0.558002 tig0020778:+30852 Msa1385860:CDS
GCTAACTATGTTAGGCCTCA+GGG 0.565015 tig0020778:+33256 Msa1385860:three_prime_UTR
TTAAGGAGTTGAATTTAAAG+GGG 0.570688 tig0020778:-27170 None:intergenic
ATGCATTCCAGTTAAAGTTG+TGG 0.571311 tig0020778:-29967 None:intergenic
TGCAAGCAAGGGTGATAGGA+AGG 0.574166 tig0020778:+28321 Msa1385860:CDS
ATGAGTTTGTTGAGTTGCGG+GGG 0.576279 tig0020778:-27208 None:intergenic
TTAGTTCCTTCACACATCAC+AGG 0.576709 tig0020778:+27343 Msa1385860:five_prime_UTR
CTGTCTTGCACTATCGCAGT+AGG 0.578297 tig0020778:+32450 Msa1385860:CDS
CCCAGTATCTTGTCTCCTAG+AGG 0.578526 tig0020778:+30268 Msa1385860:CDS
TGAGTTTGTTGAGTTGCGGG+GGG 0.579233 tig0020778:-27207 None:intergenic
CCTCTAGGAGACAAGATACT+GGG 0.579558 tig0020778:-30268 None:intergenic
CTAAAACAACATGTAGATTG+AGG 0.583168 tig0020778:-32593 None:intergenic
GATGTCAGCGTCAATGCTAA+GGG 0.584376 tig0020778:+30377 Msa1385860:CDS
TAAGGAGTTGAATTTAAAGG+GGG 0.586132 tig0020778:-27169 None:intergenic
ATTGCGGGAATGATTTGGTA+TGG 0.587500 tig0020778:+32630 Msa1385860:CDS
GGACAATGTGCGATATTCCA+GGG 0.588944 tig0020778:+30298 Msa1385860:CDS
GATCGAAGAAATGTGAGTTG+CGG 0.592494 tig0020778:-27117 None:intergenic
AAAACCATATGTGGCCATCA+GGG 0.593172 tig0020778:-28413 None:intergenic
TTTAAGAACGACCGTCAACA+AGG 0.599931 tig0020778:-30003 None:intergenic
GCAGCAAGTTTACTGCTAGT+AGG 0.603392 tig0020778:+30874 Msa1385860:CDS
GCATGAATGTGAGTTTAATG+TGG 0.603505 tig0020778:+30108 Msa1385860:CDS
GTCCTCCGAATCAGTTGAGA+AGG 0.604732 tig0020778:+32740 Msa1385860:CDS
ACTCACATTCATGCCAACAA+TGG 0.605104 tig0020778:-30099 None:intergenic
TCAACTGATTCGGAGGACAC+AGG 0.609341 tig0020778:-32735 None:intergenic
GTGTTAAGGAATTGTTTGAG+AGG 0.609813 tig0020778:+32917 Msa1385860:three_prime_UTR
GAATAGTCTTCATATGGCCA+AGG 0.611320 tig0020778:-32530 None:intergenic
CTGCCTGTGCTGGTGCAGTG+TGG 0.611883 tig0020778:-30855 None:intergenic
CATTGTCCAATACAACCTCT+AGG 0.615351 tig0020778:-30283 None:intergenic
CTATTCTGGTCCTATTCATG+GGG 0.619940 tig0020778:+32547 Msa1385860:CDS
ATAACTGACTGCATTGTTGG+GGG 0.620986 tig0020778:+33085 Msa1385860:three_prime_UTR
ATCAGATTTAGGAAGATGAG+AGG 0.631502 tig0020778:-30045 None:intergenic
TGGTAGGAAGGGAAAAGCTA+CGG 0.633359 tig0020778:-32686 None:intergenic
GAGTTTGTTGAGTTGCGGGG+GGG 0.634087 tig0020778:-27206 None:intergenic
AATAATTGGGAATTCCCTCA+AGG 0.634632 tig0020778:-32863 None:intergenic
CAATGCTTCTTCTAAGCCAG+GGG 0.639994 tig0020778:+32653 Msa1385860:CDS
ACCACAAGTTCAAAAGCGCA+CGG 0.656911 tig0020778:-28243 None:intergenic
AACAAACCTGTGATGTGTGA+AGG 0.663637 tig0020778:-27349 None:intergenic
AATATGTCATCTGCAAGCAA+GGG 0.670129 tig0020778:+28310 Msa1385860:exon
TCAGCCAATAGTCCATAAAG+GGG 0.679688 tig0020778:-30897 None:intergenic
TCGAAGAAATGTGAGTTGCG+GGG 0.688360 tig0020778:-27115 None:intergenic
CTTCCCTTGATGCAGCATCG+TGG 0.693234 tig0020778:+28344 Msa1385860:CDS
TGTGAAGGAACTAAACGACT+CGG 0.699671 tig0020778:-27334 None:intergenic
TAAAACACAAGATTATGCTG+CGG 0.731181 tig0020778:+32710 Msa1385860:CDS
AATGCTTCTTCTAAGCCAGG+GGG 0.760488 tig0020778:+32654 Msa1385860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAAATTATAAACAAATA+AGG - tig0020778:27790-27809 None:intergenic 10.0%
!! CTTATTTGTTTATAATTTAA+TGG + tig0020778:27788-27807 Msa1385860:intron 10.0%
!!! CGATTTTATTTTTATTTTTT+AGG - tig0020778:28141-28160 None:intergenic 10.0%
!! AAGTAAATATATTCATTTAT+AGG + tig0020778:30547-30566 Msa1385860:intron 10.0%
!!! ATTTTAAAATGTGATAAATT+GGG + tig0020778:30626-30645 Msa1385860:intron 10.0%
!! TAAAGTTATTTATATAACTA+AGG + tig0020778:31014-31033 Msa1385860:intron 10.0%
!! GATATACTATTTATAAATTT+AGG - tig0020778:31257-31276 None:intergenic 10.0%
!! TTCAAATTAAAAAAATTGAT+GGG - tig0020778:31376-31395 None:intergenic 10.0%
!! TTTCAAATTAAAAAAATTGA+TGG - tig0020778:31377-31396 None:intergenic 10.0%
!!! AATAAATACTTTCTATTTTA+AGG - tig0020778:33181-33200 None:intergenic 10.0%
!!! ATTTTTTTCTTGATTGTAAA+AGG - tig0020778:28091-28110 None:intergenic 15.0%
!!! TTATTTTTTAGGAAAAAACA+AGG - tig0020778:28130-28149 None:intergenic 15.0%
!! AATAAAAATAAAATCGTTTG+TGG + tig0020778:28145-28164 Msa1385860:intron 15.0%
!!! TAGTACTTTATTTTTTTCTT+GGG - tig0020778:28954-28973 None:intergenic 15.0%
!! TCAAGTATATTATACTAAAA+AGG - tig0020778:29039-29058 None:intergenic 15.0%
!! ATCAACAACTATAAATATAA+TGG - tig0020778:29419-29438 None:intergenic 15.0%
!!! GATTTTAAAATGTGATAAAT+TGG + tig0020778:30625-30644 Msa1385860:intron 15.0%
!! AACATGATCTATAAATAATT+GGG - tig0020778:32879-32898 None:intergenic 15.0%
!! TTTATATTAAATTCCTTCAA+GGG - tig0020778:33229-33248 None:intergenic 15.0%
!! TTGAAGGAATTTAATATAAA+GGG + tig0020778:33229-33248 Msa1385860:three_prime_UTR 15.0%
!! GTGTAATAATTCACTAATTT+AGG - tig0020778:27006-27025 None:intergenic 20.0%
!! TTTAAGGAGTTGAATTTAAA+GGG - tig0020778:27174-27193 None:intergenic 20.0%
!!! TTTTAAGGAGTTGAATTTAA+AGG - tig0020778:27175-27194 None:intergenic 20.0%
!!! AAATGAAGAGATTTTAGTTT+TGG - tig0020778:27245-27264 None:intergenic 20.0%
!!! TATAATTTGTTTTGACTTGA+TGG + tig0020778:27573-27592 Msa1385860:intron 20.0%
!!! TTGATTTGATTGTAGTTAAT+TGG + tig0020778:27660-27679 Msa1385860:intron 20.0%
!!! TTTGCAATTTTGATACATTT+AGG + tig0020778:27911-27930 Msa1385860:intron 20.0%
!!! TTGCAATTTTGATACATTTA+GGG + tig0020778:27912-27931 Msa1385860:intron 20.0%
!! TGTTCTTGTATATATGTATA+TGG + tig0020778:28014-28033 Msa1385860:intron 20.0%
!! TATATGGATATAAATTGATG+TGG + tig0020778:28030-28049 Msa1385860:intron 20.0%
!!! ATGATTTATTTTTTCCATAC+AGG + tig0020778:28215-28234 Msa1385860:intron 20.0%
!!! GTAGTACTTTATTTTTTTCT+TGG - tig0020778:28955-28974 None:intergenic 20.0%
!! AAGAGAATGAAATAAAATTG+TGG - tig0020778:29281-29300 None:intergenic 20.0%
!!! ATATAAACTAAACTTTTCCT+CGG + tig0020778:29378-29397 Msa1385860:intron 20.0%
!! ATTATAAGATATAGAAAGTC+AGG - tig0020778:29935-29954 None:intergenic 20.0%
!!! AATTTGATGATATCAGATTT+AGG - tig0020778:30059-30078 None:intergenic 20.0%
!!! TTAAAATAACTTGTAAGCTT+AGG + tig0020778:31081-31100 Msa1385860:intron 20.0%
!!! TAAAATAACTTGTAAGCTTA+GGG + tig0020778:31082-31101 Msa1385860:intron 20.0%
!! TACTTTCTTTACTAACATTA+TGG - tig0020778:31489-31508 None:intergenic 20.0%
!! TCTAAGTGAATTTAATGATT+TGG - tig0020778:31576-31595 None:intergenic 20.0%
!! GTAGATTTATAACAATGTAT+AGG - tig0020778:31975-31994 None:intergenic 20.0%
!!! ATTCTCTATATTTTTCAACT+TGG + tig0020778:32118-32137 Msa1385860:intron 20.0%
!!! TTCTCTATATTTTTCAACTT+GGG + tig0020778:32119-32138 Msa1385860:intron 20.0%
!!! GTTTTAAAGTTGACATAAAT+GGG - tig0020778:32324-32343 None:intergenic 20.0%
!!! AGTTTTAAAGTTGACATAAA+TGG - tig0020778:32325-32344 None:intergenic 20.0%
!! CAACATGATCTATAAATAAT+TGG - tig0020778:32880-32899 None:intergenic 20.0%
!! GTTATTTACACCATAATTAT+TGG - tig0020778:33142-33161 None:intergenic 20.0%
!! ATAATTATGGTGTAAATAAC+TGG + tig0020778:33142-33161 Msa1385860:three_prime_UTR 20.0%
!!! AAATACTTTCTATTTTAAGG+AGG - tig0020778:33178-33197 None:intergenic 20.0%
!! CTTTATATTAAATTCCTTCA+AGG - tig0020778:33230-33249 None:intergenic 20.0%
!! CTTGAAGGAATTTAATATAA+AGG + tig0020778:33228-33247 Msa1385860:three_prime_UTR 20.0%
! ACAAGAAATTTGTGAGTAAA+CGG - tig0020778:27087-27106 None:intergenic 25.0%
! TTAAGGAGTTGAATTTAAAG+GGG - tig0020778:27173-27192 None:intergenic 25.0%
! TTGTGAATTAGAGATTTGTA+TGG + tig0020778:27414-27433 Msa1385860:intron 25.0%
! TGTATGGTTTCTTAATTCTT+AGG + tig0020778:27430-27449 Msa1385860:intron 25.0%
! GTATGGTTTCTTAATTCTTA+GGG + tig0020778:27431-27450 Msa1385860:intron 25.0%
!!! TTTTGGATTGTGTTACTTTT+TGG + tig0020778:27468-27487 Msa1385860:intron 25.0%
!! AATTTGTAACTTCGTGATTT+TGG + tig0020778:27527-27546 Msa1385860:intron 25.0%
!!! GATTATTGCGTTTTATTGAT+TGG + tig0020778:27634-27653 Msa1385860:intron 25.0%
!!! CAGATAATTCTTCACTTTTT+TGG - tig0020778:27738-27757 None:intergenic 25.0%
!! TTATAAACAAATAAGGCACT+GGG - tig0020778:27783-27802 None:intergenic 25.0%
! ATTATAAACAAATAAGGCAC+TGG - tig0020778:27784-27803 None:intergenic 25.0%
!! TTTTCTTGATTGTAAAAGGA+CGG - tig0020778:28087-28106 None:intergenic 25.0%
! GAAAAATCCAGTTTGAATAT+TGG + tig0020778:28275-28294 Msa1385860:five_prime_UTR 25.0%
!!! ATATGGTTTTAGTTTTGGTA+TGG + tig0020778:28426-28445 Msa1385860:intron 25.0%
!!! TATGGTTTTAGTTTTGGTAT+GGG + tig0020778:28427-28446 Msa1385860:intron 25.0%
! ATCAATAAGAGAGAAAATGA+AGG - tig0020778:28564-28583 None:intergenic 25.0%
!!! TTTTTTATCCATGCATTGTT+TGG + tig0020778:28712-28731 Msa1385860:intron 25.0%
! GCTCTATAATATTGCTTATA+AGG - tig0020778:29480-29499 None:intergenic 25.0%
! CAATTACAAAAAGTTTGTGT+AGG - tig0020778:29573-29592 None:intergenic 25.0%
! AGATAAACCACGTTATTATT+TGG - tig0020778:29853-29872 None:intergenic 25.0%
! GTTTCTATCAGGTAAAATTT+GGG + tig0020778:30141-30160 Msa1385860:intron 25.0%
! TCTGACAATTTCATTTCAAA+AGG - tig0020778:30229-30248 None:intergenic 25.0%
! TACAAAGCTTAGTATTATCT+TGG + tig0020778:30322-30341 Msa1385860:CDS 25.0%
!!! TATTGGATCATTTAACTTGT+TGG + tig0020778:30831-30850 Msa1385860:CDS 25.0%
!!! ATTGGATCATTTAACTTGTT+GGG + tig0020778:30832-30851 Msa1385860:CDS 25.0%
! GAATTAGTTAAGCTTAAACT+AGG - tig0020778:31175-31194 None:intergenic 25.0%
!!! AATAATTATGTCCACTTTTC+AGG - tig0020778:31514-31533 None:intergenic 25.0%
!! CATAAAATGCAAGTGTTTTT+AGG - tig0020778:31660-31679 None:intergenic 25.0%
! ACCTTCCAGAAATTATATAT+GGG - tig0020778:31844-31863 None:intergenic 25.0%
! AACCTTCCAGAAATTATATA+TGG - tig0020778:31845-31864 None:intergenic 25.0%
! CGTATACTACTAAATATATC+TGG - tig0020778:31946-31965 None:intergenic 25.0%
! AGTACATACTAAATTTGTGT+GGG + tig0020778:32046-32065 Msa1385860:intron 25.0%
! TACTAGAACTTTACTAGATA+TGG - tig0020778:32095-32114 None:intergenic 25.0%
! TAGAAACACAATTTATTCTG+TGG + tig0020778:32177-32196 Msa1385860:intron 25.0%
!!! TTCATTTTCTTTGGAAAAGA+GGG + tig0020778:32570-32589 Msa1385860:CDS 25.0%
!! AGTTGAGAAGGTATAAAAAT+AGG + tig0020778:32752-32771 Msa1385860:exon 25.0%
! TAAAAATAGGCTTACAAGAA+AGG + tig0020778:32765-32784 Msa1385860:exon 25.0%
!! AAAGGAAGTGATTAAACTTT+TGG + tig0020778:32783-32802 Msa1385860:three_prime_UTR 25.0%
!! TCATTTTCTTTTATACCTTG+AGG + tig0020778:32848-32867 Msa1385860:three_prime_UTR 25.0%
!! CATTTTCTTTTATACCTTGA+GGG + tig0020778:32849-32868 Msa1385860:three_prime_UTR 25.0%
! AAACAATTCCTTAACACAAA+AGG - tig0020778:32914-32933 None:intergenic 25.0%
!!! TTATTCCATTTTTGTCTTCA+TGG + tig0020778:33035-33054 Msa1385860:three_prime_UTR 25.0%
TAAGGAGTTGAATTTAAAGG+GGG - tig0020778:27172-27191 None:intergenic 30.0%
CACGAAAAAACTTCAAGAAT+CGG - tig0020778:27378-27397 None:intergenic 30.0%
! TGATGAAAATTGTGCTATTC+TGG + tig0020778:27599-27618 Msa1385860:intron 30.0%
!! TATAAACAAATAAGGCACTG+GGG - tig0020778:27782-27801 None:intergenic 30.0%
! TTCTCAAATGTGTTTTTCGT+TGG - tig0020778:27824-27843 None:intergenic 30.0%
CTAATTTGACTACGTCAAAT+AGG + tig0020778:27844-27863 Msa1385860:intron 30.0%
GTCTCATTTATTAGTCATGT+TGG - tig0020778:27878-27897 None:intergenic 30.0%
ACTAATAAATGAGACACTTG+TGG + tig0020778:27883-27902 Msa1385860:intron 30.0%
TACAAGAACATTGTGAACAA+AGG - tig0020778:28004-28023 None:intergenic 30.0%
TGATGTGGTCTAATTGTTTA+TGG + tig0020778:28045-28064 Msa1385860:intron 30.0%
TTTCTTGATTGTAAAAGGAC+GGG - tig0020778:28086-28105 None:intergenic 30.0%
AAATAAAATCGTTTGTGGAG+TGG + tig0020778:28150-28169 Msa1385860:intron 30.0%
AATAAAATCGTTTGTGGAGT+GGG + tig0020778:28151-28170 Msa1385860:intron 30.0%
! ATTCAAACTGGATTTTTCAC+TGG - tig0020778:28273-28292 None:intergenic 30.0%
ACCAAAACTAAAACCATATG+TGG - tig0020778:28425-28444 None:intergenic 30.0%
! AACCTTTTTGTGACAACTTT+TGG + tig0020778:28533-28552 Msa1385860:intron 30.0%
! ACCTTTTTGTGACAACTTTT+GGG + tig0020778:28534-28553 Msa1385860:intron 30.0%
AGAGAGAAAAATGAAGAAAG+AGG + tig0020778:28596-28615 Msa1385860:intron 30.0%
GAGAGAAAAATGAAGAAAGA+GGG + tig0020778:28597-28616 Msa1385860:intron 30.0%
CTTTATATCCAAACAATGCA+TGG - tig0020778:28723-28742 None:intergenic 30.0%
GTACTAATTTCAACCAACAA+TGG + tig0020778:28742-28761 Msa1385860:intron 30.0%
AATTTCAACCAACAATGGAT+TGG + tig0020778:28747-28766 Msa1385860:intron 30.0%
TCACGTGTATGGATAAAATT+CGG + tig0020778:28828-28847 Msa1385860:intron 30.0%
TGTATGGATAAAATTCGGTT+GGG + tig0020778:28833-28852 Msa1385860:intron 30.0%
AAAACTTCGTACCAATATCA+TGG + tig0020778:28925-28944 Msa1385860:intron 30.0%
! TACTTTTGTGCTTTCCTTTT+TGG + tig0020778:28972-28991 Msa1385860:intron 30.0%
ATGCATGTATCATACCAAAA+AGG - tig0020778:28989-29008 None:intergenic 30.0%
! TGTATTCGTTTTGTGGAAAA+AGG + tig0020778:29008-29027 Msa1385860:intron 30.0%
CTTACTCTATAATAACCTGA+TGG + tig0020778:29152-29171 Msa1385860:intron 30.0%
!! TATCAAATTTCTAGTCCATC+AGG - tig0020778:29170-29189 None:intergenic 30.0%
CACGTAGAAAATATCCTAAA+GGG + tig0020778:29198-29217 Msa1385860:intron 30.0%
!! TAGTTGTTGATAATGCCAAT+AGG + tig0020778:29428-29447 Msa1385860:intron 30.0%
!! AGTTGTTGATAATGCCAATA+GGG + tig0020778:29429-29448 Msa1385860:intron 30.0%
ATAATGCCAATAGGGAAAAT+TGG + tig0020778:29437-29456 Msa1385860:intron 30.0%
ATGTTCAATCCAAAAATCTG+AGG + tig0020778:29595-29614 Msa1385860:intron 30.0%
TGTTCAATCCAAAAATCTGA+GGG + tig0020778:29596-29615 Msa1385860:intron 30.0%
! TGATATCACAACAAACCTTT+TGG - tig0020778:29644-29663 None:intergenic 30.0%
! TTTGTTGTGATATCAGAGAT+AGG + tig0020778:29649-29668 Msa1385860:intron 30.0%
! TTGAAGCAACTTGTGATTTT+TGG + tig0020778:29700-29719 Msa1385860:intron 30.0%
AACCACGTTATTATTTGGTT+GGG - tig0020778:29848-29867 None:intergenic 30.0%
AAACCACGTTATTATTTGGT+TGG - tig0020778:29849-29868 None:intergenic 30.0%
AAGTCAGGAATTTAGCATTT+CGG - tig0020778:29920-29939 None:intergenic 30.0%
GGTTTCTATCAGGTAAAATT+TGG + tig0020778:30140-30159 Msa1385860:intron 30.0%
! GCTTAGTATTATCTTGGTTT+TGG + tig0020778:30328-30347 Msa1385860:CDS 30.0%
TATCAAACCTGAATCTTAGT+TGG + tig0020778:30473-30492 Msa1385860:intron 30.0%
ATCAAACCTGAATCTTAGTT+GGG + tig0020778:30474-30493 Msa1385860:intron 30.0%
!! ACAGGAAAGTTTGTTGAAAA+AGG - tig0020778:30655-30674 None:intergenic 30.0%
AAGACTGCTTATGATGAAAA+TGG - tig0020778:30684-30703 None:intergenic 30.0%
CTTCAGAGGAAATATTCTAT+TGG + tig0020778:30814-30833 Msa1385860:CDS 30.0%
AGAAATAGAGAAACTTACAG+TGG - tig0020778:30962-30981 None:intergenic 30.0%
TTCTTCACCTATGAAAGAAA+GGG - tig0020778:31049-31068 None:intergenic 30.0%
ATTCTTCACCTATGAAAGAA+AGG - tig0020778:31050-31069 None:intergenic 30.0%
TTACAAATTGAAAACCGAGT+CGG - tig0020778:31212-31231 None:intergenic 30.0%
ATTCAAAAGTCCAAATTTGC+TGG + tig0020778:31279-31298 Msa1385860:intron 30.0%
! AAAAAATTGATGGGCATGAA+TGG - tig0020778:31367-31386 None:intergenic 30.0%
CAAATGTAGAGAATTCTCTA+CGG + tig0020778:31447-31466 Msa1385860:intron 30.0%
AAGAAAGTAATCCTGAAAAG+TGG + tig0020778:31500-31519 Msa1385860:intron 30.0%
TCACACTACTTCAATTAGAT+TGG - tig0020778:31602-31621 None:intergenic 30.0%
TTCCAGAAATTATATATGGG+GGG - tig0020778:31841-31860 None:intergenic 30.0%
CTTCCAGAAATTATATATGG+GGG - tig0020778:31842-31861 None:intergenic 30.0%
CCTTCCAGAAATTATATATG+GGG - tig0020778:31843-31862 None:intergenic 30.0%
AATCATTGTAGAAGCAGAAT+TGG - tig0020778:31891-31910 None:intergenic 30.0%
CAGTACATACTAAATTTGTG+TGG + tig0020778:32045-32064 Msa1385860:intron 30.0%
! CTTTACTAGATATGGTTCTA+AGG - tig0020778:32087-32106 None:intergenic 30.0%
AAAAATGAGTGTTTGTCCTA+TGG - tig0020778:32157-32176 None:intergenic 30.0%
TGACATTCACCTTAGAAAAA+AGG + tig0020778:32279-32298 Msa1385860:intron 30.0%
GACATTCACCTTAGAAAAAA+GGG + tig0020778:32280-32299 Msa1385860:intron 30.0%
!!! ATGGTTGTTTTTATGAGTGA+AGG - tig0020778:32358-32377 None:intergenic 30.0%
AACAGTCAAAACAGTAATCA+TGG - tig0020778:32377-32396 None:intergenic 30.0%
!!! ATGATTACTGTTTTGACTGT+TGG + tig0020778:32376-32395 Msa1385860:intron 30.0%
!! GTTCATTTTCTTTGGAAAAG+AGG + tig0020778:32569-32588 Msa1385860:CDS 30.0%
CTAAAACAACATGTAGATTG+AGG - tig0020778:32596-32615 None:intergenic 30.0%
!!! CTCAATCTACATGTTGTTTT+AGG + tig0020778:32594-32613 Msa1385860:CDS 30.0%
! TAATCTTGTGTTTTACTGGT+AGG - tig0020778:32705-32724 None:intergenic 30.0%
! AGCATAATCTTGTGTTTTAC+TGG - tig0020778:32709-32728 None:intergenic 30.0%
TAAAACACAAGATTATGCTG+CGG + tig0020778:32710-32729 Msa1385860:CDS 30.0%
TTATACCTTCTCAACTGATT+CGG - tig0020778:32748-32767 None:intergenic 30.0%
TGTTAAGGAATTGTTTGAGA+GGG + tig0020778:32918-32937 Msa1385860:three_prime_UTR 30.0%
!!! ACAACTCTTATTTTGGAAGA+GGG + tig0020778:32951-32970 Msa1385860:three_prime_UTR 30.0%
TGGTAAGTGACCAATAATTA+TGG + tig0020778:33129-33148 Msa1385860:three_prime_UTR 30.0%
ATTTCTTCGATCTCTGAATC+TGG + tig0020778:27128-27147 Msa1385860:five_prime_UTR 35.0%
!! TGAATGAGTTTGTTGAGTTG+CGG - tig0020778:27214-27233 None:intergenic 35.0%
TTCTTAATTCTTAGGGATCG+TGG + tig0020778:27438-27457 Msa1385860:intron 35.0%
TTCTTGATTGTAAAAGGACG+GGG - tig0020778:28085-28104 None:intergenic 35.0%
AGAGCTTCCAATATTCAAAC+TGG - tig0020778:28285-28304 None:intergenic 35.0%
AATATGTCATCTGCAAGCAA+GGG + tig0020778:28310-28329 Msa1385860:exon 35.0%
!!! GCCACATATGGTTTTAGTTT+TGG + tig0020778:28421-28440 Msa1385860:CDS 35.0%
TTCAAAAGCGGGTAAGAAAA+TGG - tig0020778:28465-28484 None:intergenic 35.0%
AACCAACCAAGATTCAAAAG+CGG - tig0020778:28477-28496 None:intergenic 35.0%
TCCCAAAAGTTGTCACAAAA+AGG - tig0020778:28538-28557 None:intergenic 35.0%
CAATGAGAATATGAGAGAGA+CGG + tig0020778:28628-28647 Msa1385860:intron 35.0%
! AACCATTTTGTGACAACCTT+TGG - tig0020778:28658-28677 None:intergenic 35.0%
GTGTATGGATAAAATTCGGT+TGG + tig0020778:28832-28851 Msa1385860:intron 35.0%
TTCTTGGGTTACCATGATAT+TGG - tig0020778:28939-28958 None:intergenic 35.0%
! ACATGCATGTATTCGTTTTG+TGG + tig0020778:29001-29020 Msa1385860:intron 35.0%
!!! CCTTTAGGATATTTTCTACG+TGG - tig0020778:29200-29219 None:intergenic 35.0%
CCACGTAGAAAATATCCTAA+AGG + tig0020778:29197-29216 Msa1385860:intron 35.0%
GTAGAAAATATCCTAAAGGG+TGG + tig0020778:29201-29220 Msa1385860:intron 35.0%
TGTATCAAATACCACCCTTT+AGG - tig0020778:29215-29234 None:intergenic 35.0%
GTGGTATTTGATACAGTTGT+TGG + tig0020778:29220-29239 Msa1385860:intron 35.0%
GTATTTGATACAGTTGTTGG+TGG + tig0020778:29223-29242 Msa1385860:intron 35.0%
! TCAATGCCAATTTTCCCTAT+TGG - tig0020778:29446-29465 None:intergenic 35.0%
GAAAGAAATACCTGAGAAGA+AGG + tig0020778:29514-29533 Msa1385860:intron 35.0%
!! TCACAACAAACCTTTTGGAA+CGG - tig0020778:29639-29658 None:intergenic 35.0%
! TTTAAAACTGCAGTAGCTGT+GGG - tig0020778:29769-29788 None:intergenic 35.0%
!!! GCTACTGCAGTTTTAAAGTA+CGG + tig0020778:29772-29791 Msa1385860:intron 35.0%
TACCCAACCAAATAATAACG+TGG + tig0020778:29843-29862 Msa1385860:intron 35.0%
ATGCATTCCAGTTAAAGTTG+TGG - tig0020778:29970-29989 None:intergenic 35.0%
ATCAGATTTAGGAAGATGAG+AGG - tig0020778:30048-30067 None:intergenic 35.0%
TTTGCAAATTGCTCCATTGT+TGG + tig0020778:30086-30105 Msa1385860:CDS 35.0%
GCATGAATGTGAGTTTAATG+TGG + tig0020778:30108-30127 Msa1385860:CDS 35.0%
AGTTTAATGTGGAACTCTGT+CGG + tig0020778:30119-30138 Msa1385860:CDS 35.0%
! TCAGGTAAAATTTGGGCTTT+TGG + tig0020778:30148-30167 Msa1385860:intron 35.0%
! AATACTAAGCTTTGTATCCC+TGG - tig0020778:30318-30337 None:intergenic 35.0%
!!! AGTATTATCTTGGTTTTGGC+TGG + tig0020778:30332-30351 Msa1385860:CDS 35.0%
! ATTTGATTTCCATGTCACCA+AGG + tig0020778:30513-30532 Msa1385860:intron 35.0%
TTACTTATCTTGAACAGCCT+TGG - tig0020778:30533-30552 None:intergenic 35.0%
TGATGAAAATGGAGAGAAAC+AGG - tig0020778:30673-30692 None:intergenic 35.0%
!! GAACTCTTCCTCTTTTGTTT+GGG + tig0020778:30726-30745 Msa1385860:intron 35.0%
! AGTATGTGCATTTTCTTCAG+AGG + tig0020778:30800-30819 Msa1385860:intron 35.0%
AATATTGAGAATTGATCCCC+AGG + tig0020778:31139-31158 Msa1385860:intron 35.0%
AACTAGGCTATAGTAAACCT+GGG - tig0020778:31159-31178 None:intergenic 35.0%
AAACTAGGCTATAGTAAACC+TGG - tig0020778:31160-31179 None:intergenic 35.0%
! CTGTAAGTAGCATTTGAAGT+AGG + tig0020778:31317-31336 Msa1385860:intron 35.0%
CCTCTTCAAAGAGACTTAAA+AGG - tig0020778:31410-31429 None:intergenic 35.0%
!! CCTTTTAAGTCTCTTTGAAG+AGG + tig0020778:31407-31426 Msa1385860:intron 35.0%
! TTTAAGTCTCTTTGAAGAGG+TGG + tig0020778:31410-31429 Msa1385860:intron 35.0%
TTGTATAAACCTGTACTGCT+TGG + tig0020778:31542-31561 Msa1385860:intron 35.0%
TGTATAAACCTGTACTGCTT+GGG + tig0020778:31543-31562 Msa1385860:intron 35.0%
!!! CAAGTGTTTTTAGGCTAGAT+TGG - tig0020778:31651-31670 None:intergenic 35.0%
CTAAGAACGTAAGATCTATG+AGG + tig0020778:31692-31711 Msa1385860:intron 35.0%
GTTATCATGCTCAAATCTAG+TGG + tig0020778:31719-31738 Msa1385860:intron 35.0%
CTAAGTAAAATCTTCATCGC+AGG - tig0020778:31782-31801 None:intergenic 35.0%
! CCCCATATATAATTTCTGGA+AGG + tig0020778:31840-31859 Msa1385860:intron 35.0%
TGCTTCTACAATGATTTCCT+GGG + tig0020778:31895-31914 Msa1385860:intron 35.0%
! TCATTTTCAGAGAGAGAAAC+AGG - tig0020778:32256-32275 None:intergenic 35.0%
ATTCACCTTAGAAAAAAGGG+AGG + tig0020778:32283-32302 Msa1385860:intron 35.0%
CATAAATGGGTATGCGTATT+TGG - tig0020778:32311-32330 None:intergenic 35.0%
ACTATTCTGGTCCTATTCAT+GGG + tig0020778:32546-32565 Msa1385860:CDS 35.0%
AGAAAATGAACCCCATGAAT+AGG - tig0020778:32560-32579 None:intergenic 35.0%
! TTCATGGGGTTCATTTTCTT+TGG + tig0020778:32561-32580 Msa1385860:CDS 35.0%
!!! TCTACATGTTGTTTTAGGCA+TGG + tig0020778:32599-32618 Msa1385860:CDS 35.0%
! TTGTGTTTTACTGGTAGGAA+GGG - tig0020778:32700-32719 None:intergenic 35.0%
! AAACTTTTGGTGAAGTGCAT+AGG + tig0020778:32796-32815 Msa1385860:three_prime_UTR 35.0%
AATGAATCAGCTTGCCTAAA+GGG - tig0020778:32833-32852 None:intergenic 35.0%
AAATGAATCAGCTTGCCTAA+AGG - tig0020778:32834-32853 None:intergenic 35.0%
AATAATTGGGAATTCCCTCA+AGG - tig0020778:32866-32885 None:intergenic 35.0%
! TATCTCTGCCTTTTGTGTTA+AGG + tig0020778:32903-32922 Msa1385860:three_prime_UTR 35.0%
GTGTTAAGGAATTGTTTGAG+AGG + tig0020778:32917-32936 Msa1385860:three_prime_UTR 35.0%
!!! GACAACTCTTATTTTGGAAG+AGG + tig0020778:32950-32969 Msa1385860:three_prime_UTR 35.0%
GCTAACCATGAAGACAAAAA+TGG - tig0020778:33043-33062 None:intergenic 35.0%
TGATAACTGACTGCATTGTT+GGG + tig0020778:33083-33102 Msa1385860:three_prime_UTR 35.0%
AGGGTTATGCTAACTATGTT+AGG + tig0020778:33248-33267 Msa1385860:three_prime_UTR 35.0%
ATCGAAGAAATGTGAGTTGC+GGG - tig0020778:27119-27138 None:intergenic 40.0%
GATCGAAGAAATGTGAGTTG+CGG - tig0020778:27120-27139 None:intergenic 40.0%
!!! GGGGTTTGAGTTTGGTTTTA+AGG - tig0020778:27190-27209 None:intergenic 40.0%
!! AATGAGTTTGTTGAGTTGCG+GGG - tig0020778:27212-27231 None:intergenic 40.0%
!! GAATGAGTTTGTTGAGTTGC+GGG - tig0020778:27213-27232 None:intergenic 40.0%
TGTGAAGGAACTAAACGACT+CGG - tig0020778:27337-27356 None:intergenic 40.0%
TTAGTTCCTTCACACATCAC+AGG + tig0020778:27343-27362 Msa1385860:five_prime_UTR 40.0%
AACAAACCTGTGATGTGTGA+AGG - tig0020778:27352-27371 None:intergenic 40.0%
! TTTTAGTCCTTGAATGTGCG+AGG - tig0020778:27953-27972 None:intergenic 40.0%
CAATATGTCATCTGCAAGCA+AGG + tig0020778:28309-28328 Msa1385860:exon 40.0%
TTTAACGTCGTTACGTCTGT+GGG + tig0020778:28370-28389 Msa1385860:CDS 40.0%
AAAACCATATGTGGCCATCA+GGG - tig0020778:28416-28435 None:intergenic 40.0%
TAAAACCATATGTGGCCATC+AGG - tig0020778:28417-28436 None:intergenic 40.0%
!! TCTTACCCGCTTTTGAATCT+TGG + tig0020778:28468-28487 Msa1385860:intron 40.0%
ACCAACCAAGATTCAAAAGC+GGG - tig0020778:28476-28495 None:intergenic 40.0%
GTCCAAAGGTTGTCACAAAA+TGG + tig0020778:28653-28672 Msa1385860:intron 40.0%
ATGGATAAAATTCGGTTGGG+AGG + tig0020778:28836-28855 Msa1385860:intron 40.0%
TGGATAAAATTCGGTTGGGA+GGG + tig0020778:28837-28856 Msa1385860:intron 40.0%
AGCTTTGCTTGCATTACCTT+TGG + tig0020778:29111-29130 Msa1385860:intron 40.0%
GCTTTGCTTGCATTACCTTT+GGG + tig0020778:29112-29131 Msa1385860:intron 40.0%
CTTTGCTTGCATTACCTTTG+GGG + tig0020778:29113-29132 Msa1385860:intron 40.0%
!! GGATGCATTTTTCAAATCCG+AGG - tig0020778:29398-29417 None:intergenic 40.0%
! GCACATTTCCCTCAGATTTT+TGG - tig0020778:29607-29626 None:intergenic 40.0%
!!! CGATTTTTTCCCGTTCCAAA+AGG + tig0020778:29626-29645 Msa1385860:intron 40.0%
!!! CACAACAAACCTTTTGGAAC+GGG - tig0020778:29638-29657 None:intergenic 40.0%
! AGGCATTTAGACTTTTCGCT+AGG + tig0020778:29669-29688 Msa1385860:intron 40.0%
!! CTTTAAAACTGCAGTAGCTG+TGG - tig0020778:29770-29789 None:intergenic 40.0%
TATGCAGCCACAACTTTAAC+TGG + tig0020778:29960-29979 Msa1385860:intron 40.0%
TTTAAGAACGACCGTCAACA+AGG - tig0020778:30006-30025 None:intergenic 40.0%
ATTTAGGAAGATGAGAGGTC+TGG - tig0020778:30043-30062 None:intergenic 40.0%
ACTCACATTCATGCCAACAA+TGG - tig0020778:30102-30121 None:intergenic 40.0%
TTGTCTCCTAGAGGTTGTAT+TGG + tig0020778:30277-30296 Msa1385860:CDS 40.0%
CATTGTCCAATACAACCTCT+AGG - tig0020778:30286-30305 None:intergenic 40.0%
CTATCTCCCAACTAAGATTC+AGG - tig0020778:30483-30502 None:intergenic 40.0%
! CGAACTCTTCCTCTTTTGTT+TGG + tig0020778:30725-30744 Msa1385860:intron 40.0%
TCAGCCAATAGTCCATAAAG+GGG - tig0020778:30900-30919 None:intergenic 40.0%
GTCAGCCAATAGTCCATAAA+GGG - tig0020778:30901-30920 None:intergenic 40.0%
TGTCAGCCAATAGTCCATAA+AGG - tig0020778:30902-30921 None:intergenic 40.0%
TAGACTGCCCTTTCTTTCAT+AGG + tig0020778:31039-31058 Msa1385860:intron 40.0%
ACTAGGCTATAGTAAACCTG+GGG - tig0020778:31158-31177 None:intergenic 40.0%
!! TCCAAATTTGCTGGTTGTCT+AGG + tig0020778:31288-31307 Msa1385860:intron 40.0%
TCCTAGACAACCAGCAAATT+TGG - tig0020778:31292-31311 None:intergenic 40.0%
AACGTAAGATCTATGAGGTC+TGG + tig0020778:31697-31716 Msa1385860:intron 40.0%
CTCCCCCCATATATAATTTC+TGG + tig0020778:31836-31855 Msa1385860:intron 40.0%
GAAGCAGAATTGGCAAATCA+GGG - tig0020778:31881-31900 None:intergenic 40.0%
AGAAGCAGAATTGGCAAATC+AGG - tig0020778:31882-31901 None:intergenic 40.0%
CTGCTTCTACAATGATTTCC+TGG + tig0020778:31894-31913 Msa1385860:intron 40.0%
GCTTCTACAATGATTTCCTG+GGG + tig0020778:31896-31915 Msa1385860:intron 40.0%
!! TTCTAAGGTATGCCAAGGAT+GGG - tig0020778:32072-32091 None:intergenic 40.0%
!! TATGGTTCTAAGGTATGCCA+AGG - tig0020778:32077-32096 None:intergenic 40.0%
TTTGTCCTATGGCAAAGGAT+AGG - tig0020778:32146-32165 None:intergenic 40.0%
GAGAAACTGTTTACTGTGCA+TGG + tig0020778:32201-32220 Msa1385860:intron 40.0%
!!! TGGATCCTCCCTTTTTTCTA+AGG - tig0020778:32291-32310 None:intergenic 40.0%
TTATTAAGCTGATCTGCTCC+TGG + tig0020778:32406-32425 Msa1385860:intron 40.0%
! CATCTGCATTGGTAGGTTTA+CGG + tig0020778:32491-32510 Msa1385860:CDS 40.0%
GAATAGTCTTCATATGGCCA+AGG - tig0020778:32533-32552 None:intergenic 40.0%
TGGCCATATGAAGACTATTC+TGG + tig0020778:32533-32552 Msa1385860:CDS 40.0%
GGACCAGAATAGTCTTCATA+TGG - tig0020778:32539-32558 None:intergenic 40.0%
GACTATTCTGGTCCTATTCA+TGG + tig0020778:32545-32564 Msa1385860:CDS 40.0%
CTATTCTGGTCCTATTCATG+GGG + tig0020778:32547-32566 Msa1385860:CDS 40.0%
TTGCAATTGCGGGAATGATT+TGG + tig0020778:32625-32644 Msa1385860:CDS 40.0%
!! ATTGCGGGAATGATTTGGTA+TGG + tig0020778:32630-32649 Msa1385860:CDS 40.0%
! CTTGTGTTTTACTGGTAGGA+AGG - tig0020778:32701-32720 None:intergenic 40.0%
!! GAGGAGGACAACTCTTATTT+TGG + tig0020778:32944-32963 Msa1385860:three_prime_UTR 40.0%
CTGATAACTGACTGCATTGT+TGG + tig0020778:33082-33101 Msa1385860:three_prime_UTR 40.0%
GATAACTGACTGCATTGTTG+GGG + tig0020778:33084-33103 Msa1385860:three_prime_UTR 40.0%
ATAACTGACTGCATTGTTGG+GGG + tig0020778:33085-33104 Msa1385860:three_prime_UTR 40.0%
CCTGCTTCTTGCATCTCAAT+TGG - tig0020778:27028-27047 None:intergenic 45.0%
CCAATTGAGATGCAAGAAGC+AGG + tig0020778:27025-27044 Msa1385860:five_prime_UTR 45.0%
TCGAAGAAATGTGAGTTGCG+GGG - tig0020778:27118-27137 None:intergenic 45.0%
!! ATGAGTTTGTTGAGTTGCGG+GGG - tig0020778:27211-27230 None:intergenic 45.0%
CATTTAGGGACCATAGTGAC+AGG + tig0020778:27926-27945 Msa1385860:intron 45.0%
AAATCGTTTGTGGAGTGGGT+TGG + tig0020778:28155-28174 Msa1385860:intron 45.0%
! AATCGTTTGTGGAGTGGGTT+GGG + tig0020778:28156-28175 Msa1385860:intron 45.0%
! ACCACAAGTTCAAAAGCGCA+CGG - tig0020778:28246-28265 None:intergenic 45.0%
GTTTAACGTCGTTACGTCTG+TGG + tig0020778:28369-28388 Msa1385860:CDS 45.0%
!! ACCCGCTTTTGAATCTTGGT+TGG + tig0020778:28472-28491 Msa1385860:intron 45.0%
CACTTGGACCAATCCATTGT+TGG - tig0020778:28758-28777 None:intergenic 45.0%
!! CAACAATGGATTGGTCCAAG+TGG + tig0020778:28756-28775 Msa1385860:intron 45.0%
!! ATGGATTGGTCCAAGTGGTA+AGG + tig0020778:28761-28780 Msa1385860:intron 45.0%
!! TGGATTGGTCCAAGTGGTAA+GGG + tig0020778:28762-28781 Msa1385860:intron 45.0%
AACCCCTTAAGCATGTGATC+AGG + tig0020778:28790-28809 Msa1385860:intron 45.0%
ACCCCTTAAGCATGTGATCA+GGG + tig0020778:28791-28810 Msa1385860:intron 45.0%
ACCCCTGATCACATGCTTAA+GGG - tig0020778:28796-28815 None:intergenic 45.0%
AACCCCTGATCACATGCTTA+AGG - tig0020778:28797-28816 None:intergenic 45.0%
TTTATCCATACACGTGAGCC+AGG - tig0020778:28825-28844 None:intergenic 45.0%
GGATAAAATTCGGTTGGGAG+GGG + tig0020778:28838-28857 Msa1385860:intron 45.0%
GATAAAATTCGGTTGGGAGG+GGG + tig0020778:28839-28858 Msa1385860:intron 45.0%
TAGCAGTGACTAATCTCCGT+CGG - tig0020778:28895-28914 None:intergenic 45.0%
! GATTAGTCACTGCTAAGCAG+CGG + tig0020778:28900-28919 Msa1385860:intron 45.0%
! GCTGTCGATTGTACTGTATC+TGG + tig0020778:29336-29355 Msa1385860:intron 45.0%
TGCTAGCATACCTTCTTCTC+AGG - tig0020778:29527-29546 None:intergenic 45.0%
TGCCACAACAACCTTGTTGA+CGG + tig0020778:29992-30011 Msa1385860:CDS 45.0%
ACGGTCGTTCTTAAATCGCT+GGG + tig0020778:30011-30030 Msa1385860:CDS 45.0%
!! GAACTCTGTCGGTTTCTATC+AGG + tig0020778:30130-30149 Msa1385860:CDS 45.0%
! CCTCTAGGAGACAAGATACT+GGG - tig0020778:30271-30290 None:intergenic 45.0%
! ACCTCTAGGAGACAAGATAC+TGG - tig0020778:30272-30291 None:intergenic 45.0%
TGGACAATGTGCGATATTCC+AGG + tig0020778:30297-30316 Msa1385860:CDS 45.0%
GGACAATGTGCGATATTCCA+GGG + tig0020778:30298-30317 Msa1385860:CDS 45.0%
TGATGTCAGCGTCAATGCTA+AGG + tig0020778:30376-30395 Msa1385860:CDS 45.0%
GATGTCAGCGTCAATGCTAA+GGG + tig0020778:30377-30396 Msa1385860:CDS 45.0%
ACGAGAAGCCCAAACAAAAG+AGG - tig0020778:30737-30756 None:intergenic 45.0%
!! TCTCGTGCTCTAGGTTTTAC+AGG + tig0020778:30751-30770 Msa1385860:intron 45.0%
!! CTCGTGCTCTAGGTTTTACA+GGG + tig0020778:30752-30771 Msa1385860:intron 45.0%
GCAGCAAGTTTACTGCTAGT+AGG + tig0020778:30874-30893 Msa1385860:CDS 45.0%
! TAGGCCCCTTTATGGACTAT+TGG + tig0020778:30893-30912 Msa1385860:CDS 45.0%
CACGCAAGCACACATTATAC+AGG - tig0020778:31114-31133 None:intergenic 45.0%
CTGTATAATGTGTGCTTGCG+TGG + tig0020778:31112-31131 Msa1385860:intron 45.0%
ACACTACTTCACAACCGACT+CGG + tig0020778:31195-31214 Msa1385860:intron 45.0%
GGGCATGAATGGAAGTTAAC+TGG - tig0020778:31356-31375 None:intergenic 45.0%
! AAGTCTCTTTGAAGAGGTGG+AGG + tig0020778:31413-31432 Msa1385860:intron 45.0%
! ATTATATATGGGGGGAGCAC+AGG - tig0020778:31833-31852 None:intergenic 45.0%
TCATGCAACATCATAACCCC+AGG - tig0020778:31915-31934 None:intergenic 45.0%
!! GTTCTAAGGTATGCCAAGGA+TGG - tig0020778:32073-32092 None:intergenic 45.0%
GAGTGTTTGTCCTATGGCAA+AGG - tig0020778:32151-32170 None:intergenic 45.0%
ACCTACCAATGCAGATGAAC+TGG - tig0020778:32488-32507 None:intergenic 45.0%
GCCAAGGACTTGGAATGATA+CGG - tig0020778:32517-32536 None:intergenic 45.0%
TCTTCATATGGCCAAGGACT+TGG - tig0020778:32527-32546 None:intergenic 45.0%
AGGCATGGCAATTGCAATTG+CGG + tig0020778:32614-32633 Msa1385860:CDS 45.0%
GCAATGCTTCTTCTAAGCCA+GGG + tig0020778:32652-32671 Msa1385860:CDS 45.0%
CAATGCTTCTTCTAAGCCAG+GGG + tig0020778:32653-32672 Msa1385860:CDS 45.0%
AATGCTTCTTCTAAGCCAGG+GGG + tig0020778:32654-32673 Msa1385860:CDS 45.0%
TGGTAGGAAGGGAAAAGCTA+CGG - tig0020778:32689-32708 None:intergenic 45.0%
!! TACCTTCTCAACTGATTCGG+AGG - tig0020778:32745-32764 None:intergenic 45.0%
AGGAAAATCATGCGCCCTTT+AGG + tig0020778:32816-32835 Msa1385860:three_prime_UTR 45.0%
GAATTGTTTGAGAGGGAGAG+AGG + tig0020778:32925-32944 Msa1385860:three_prime_UTR 45.0%
ATTGTTGGGGGTTCACATGT+TGG + tig0020778:33097-33116 Msa1385860:three_prime_UTR 45.0%
TCACATGTTGGAATCTCTGC+TGG + tig0020778:33109-33128 Msa1385860:three_prime_UTR 45.0%
ACTCTAACAAGTGCCCTTGA+AGG + tig0020778:33213-33232 Msa1385860:three_prime_UTR 45.0%
!! AATATCTATTATAAAAAAAT+TGG - tig0020778:32991-33010 None:intergenic 5.0%
!! TGAGTTTGTTGAGTTGCGGG+GGG - tig0020778:27210-27229 None:intergenic 50.0%
! AGAAGAACGCGACGTCGTTT+TGG - tig0020778:27309-27328 None:intergenic 50.0%
! GGGATCGTGGATCTGTGTTT+TGG + tig0020778:27451-27470 Msa1385860:intron 50.0%
!! ATCGTTTGTGGAGTGGGTTG+GGG + tig0020778:28157-28176 Msa1385860:intron 50.0%
CATCTGCAAGCAAGGGTGAT+AGG + tig0020778:28317-28336 Msa1385860:CDS 50.0%
TGCAAGCAAGGGTGATAGGA+AGG + tig0020778:28321-28340 Msa1385860:CDS 50.0%
CAACCACGATGCTGCATCAA+GGG - tig0020778:28350-28369 None:intergenic 50.0%
ACAACCACGATGCTGCATCA+AGG - tig0020778:28351-28370 None:intergenic 50.0%
!! CCATCAGGGCTTTGTTCACA+AGG - tig0020778:28402-28421 None:intergenic 50.0%
CCTTGTGAACAAAGCCCTGA+TGG + tig0020778:28399-28418 Msa1385860:CDS 50.0%
AAAGCCCTGATGGCCACATA+TGG + tig0020778:28409-28428 Msa1385860:CDS 50.0%
TGAGAGAGACGGTTGTCCAA+AGG + tig0020778:28639-28658 Msa1385860:intron 50.0%
GGTTCAAGTCCCTTACCACT+TGG - tig0020778:28774-28793 None:intergenic 50.0%
CCCCTGATCACATGCTTAAG+GGG - tig0020778:28795-28814 None:intergenic 50.0%
CCCCTTAAGCATGTGATCAG+GGG + tig0020778:28792-28811 Msa1385860:intron 50.0%
GTGATCAGGGGTTTGATTCC+TGG + tig0020778:28804-28823 Msa1385860:intron 50.0%
TGATTCCTGGCTCACGTGTA+TGG + tig0020778:28817-28836 Msa1385860:intron 50.0%
AGCAGTGACTAATCTCCGTC+GGG - tig0020778:28894-28913 None:intergenic 50.0%
CAGCAGAATCAGTACCCCAA+AGG - tig0020778:29130-29149 None:intergenic 50.0%
GACCGTCAACAAGGTTGTTG+TGG - tig0020778:29997-30016 None:intergenic 50.0%
GACGGTCGTTCTTAAATCGC+TGG + tig0020778:30010-30029 Msa1385860:CDS 50.0%
CCCAGTATCTTGTCTCCTAG+AGG + tig0020778:30268-30287 Msa1385860:CDS 50.0%
!!! CTTGGTTTTGGCTGGTGTTG+CGG + tig0020778:30340-30359 Msa1385860:CDS 50.0%
! CTTGAACAGCCTTGGTGACA+TGG - tig0020778:30525-30544 None:intergenic 50.0%
!! AGTAAACTTGCTGCCTGTGC+TGG - tig0020778:30868-30887 None:intergenic 50.0%
ACTGCTAGTAGGCCCCTTTA+TGG + tig0020778:30885-30904 Msa1385860:CDS 50.0%
! CGAGTTGACGCATACGACTA+TGG + tig0020778:30928-30947 Msa1385860:CDS 50.0%
GCTAATGTCCCAAGCAGTAC+AGG - tig0020778:31554-31573 None:intergenic 50.0%
AATTTGTGTGGGCCCATCCT+TGG + tig0020778:32057-32076 Msa1385860:intron 50.0%
TGGGTCCTATCCTTTGCCAT+AGG + tig0020778:32138-32157 Msa1385860:intron 50.0%
GATGAACAACTGCAGACACC+AGG - tig0020778:32427-32446 None:intergenic 50.0%
CTGTCTTGCACTATCGCAGT+AGG + tig0020778:32450-32469 Msa1385860:CDS 50.0%
CTCAGCCAGTTCATCTGCAT+TGG + tig0020778:32480-32499 Msa1385860:CDS 50.0%
! GCCAGTTCATCTGCATTGGT+AGG + tig0020778:32484-32503 Msa1385860:CDS 50.0%
GCCGTATCATTCCAAGTCCT+TGG + tig0020778:32513-32532 Msa1385860:CDS 50.0%
GGCATGGCAATTGCAATTGC+GGG + tig0020778:32615-32634 Msa1385860:CDS 50.0%
GGCAATGCTTCTTCTAAGCC+AGG + tig0020778:32651-32670 Msa1385860:CDS 50.0%
TTCTTCTAAGCCAGGGGGTA+AGG + tig0020778:32659-32678 Msa1385860:CDS 50.0%
!! TCAACTGATTCGGAGGACAC+AGG - tig0020778:32738-32757 None:intergenic 50.0%
GTCCTCCGAATCAGTTGAGA+AGG + tig0020778:32740-32759 Msa1385860:CDS 50.0%
TTGTTTGAGAGGGAGAGAGG+AGG + tig0020778:32928-32947 Msa1385860:three_prime_UTR 50.0%
!! GAGTTTGTTGAGTTGCGGGG+GGG - tig0020778:27209-27228 None:intergenic 55.0%
TGTGCGAGGTCCTGTCACTA+TGG - tig0020778:27939-27958 None:intergenic 55.0%
GACAGGACCTCGCACATTCA+AGG + tig0020778:27943-27962 Msa1385860:intron 55.0%
AGCGCACGGCTTTACCTGTA+TGG - tig0020778:28232-28251 None:intergenic 55.0%
! GCCGTGCGCTTTTGAACTTG+TGG + tig0020778:28242-28261 Msa1385860:five_prime_UTR 55.0%
CTTCCCTTGATGCAGCATCG+TGG + tig0020778:28344-28363 Msa1385860:CDS 55.0%
GTTTGGGCTTCTCGTGCTCT+AGG + tig0020778:30742-30761 Msa1385860:intron 55.0%
! GTTGCGGGGGGGTTTGAGTT+TGG - tig0020778:27198-27217 None:intergenic 60.0%
AACCCACCTTGTGTGCCCCA+CGG + tig0020778:28864-28883 Msa1385860:intron 60.0%
ATCTCCGTCGGGAAACCCGT+GGG - tig0020778:28883-28902 None:intergenic 60.0%
AATCTCCGTCGGGAAACCCG+TGG - tig0020778:28884-28903 None:intergenic 60.0%
ACCCACCTTGTGTGCCCCAC+GGG + tig0020778:28865-28884 Msa1385860:intron 65.0%
ACCCGTGGGGCACACAAGGT+GGG - tig0020778:28869-28888 None:intergenic 65.0%
AACCCGTGGGGCACACAAGG+TGG - tig0020778:28870-28889 None:intergenic 65.0%
GGAAACCCGTGGGGCACACA+AGG - tig0020778:28873-28892 None:intergenic 65.0%
TCTCCGTCGGGAAACCCGTG+GGG - tig0020778:28882-28901 None:intergenic 65.0%
! CTGCCTGTGCTGGTGCAGTG+TGG - tig0020778:30858-30877 None:intergenic 65.0%
GTGCCCCACGGGTTTCCCGA+CGG + tig0020778:28876-28895 Msa1385860:intron 70.0%
GGGCCACACTGCACCAGCAC+AGG + tig0020778:30852-30871 Msa1385860:CDS 70.0%
CTACGGCGCTCCTTACCCCC+TGG - tig0020778:32672-32691 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0020778 gene 26995 33276 26995 ID=Msa1385860;Name=Msa1385860
tig0020778 mRNA 26995 33276 26995 ID=Msa1385860-mRNA-1;Parent=Msa1385860;Name=Msa1385860-mRNA-1;_AED=0.22;_eAED=0.22;_QI=426|1|1|1|0.66|0.57|7|509|335
tig0020778 exon 26995 27283 26995 ID=Msa1385860-mRNA-1:exon:9855;Parent=Msa1385860-mRNA-1
tig0020778 exon 27304 27364 27304 ID=Msa1385860-mRNA-1:exon:9856;Parent=Msa1385860-mRNA-1
tig0020778 exon 28237 28442 28237 ID=Msa1385860-mRNA-1:exon:9857;Parent=Msa1385860-mRNA-1
tig0020778 exon 29967 30151 29967 ID=Msa1385860-mRNA-1:exon:9858;Parent=Msa1385860-mRNA-1
tig0020778 exon 30248 30448 30248 ID=Msa1385860-mRNA-1:exon:9859;Parent=Msa1385860-mRNA-1
tig0020778 exon 30802 30963 30802 ID=Msa1385860-mRNA-1:exon:9860;Parent=Msa1385860-mRNA-1
tig0020778 exon 32438 33276 32438 ID=Msa1385860-mRNA-1:exon:9861;Parent=Msa1385860-mRNA-1
tig0020778 five_prime_UTR 26995 27283 26995 ID=Msa1385860-mRNA-1:five_prime_utr;Parent=Msa1385860-mRNA-1
tig0020778 five_prime_UTR 27304 27364 27304 ID=Msa1385860-mRNA-1:five_prime_utr;Parent=Msa1385860-mRNA-1
tig0020778 five_prime_UTR 28237 28312 28237 ID=Msa1385860-mRNA-1:five_prime_utr;Parent=Msa1385860-mRNA-1
tig0020778 CDS 28313 28442 28313 ID=Msa1385860-mRNA-1:cds;Parent=Msa1385860-mRNA-1
tig0020778 CDS 29967 30151 29967 ID=Msa1385860-mRNA-1:cds;Parent=Msa1385860-mRNA-1
tig0020778 CDS 30248 30448 30248 ID=Msa1385860-mRNA-1:cds;Parent=Msa1385860-mRNA-1
tig0020778 CDS 30802 30963 30802 ID=Msa1385860-mRNA-1:cds;Parent=Msa1385860-mRNA-1
tig0020778 CDS 32438 32767 32438 ID=Msa1385860-mRNA-1:cds;Parent=Msa1385860-mRNA-1
tig0020778 three_prime_UTR 32768 33276 32768 ID=Msa1385860-mRNA-1:three_prime_utr;Parent=Msa1385860-mRNA-1
Gene Sequence

>Msa1385860

ATGTCATCTGCAAGCAAGGGTGATAGGAAGGCTTCCCTTGATGCAGCATCGTGGTTGTTTAACGTCGTTACGTCTGTGGGAATAATCCTTGTGAACAAAGCCCTGATGGCCACATATGGTTTTAGTTTTGCCACAACTTTAACTGGAATGCATTTTGCCACAACAACCTTGTTGACGGTCGTTCTTAAATCGCTGGGATATATCCAGACCTCTCATCTTCCTAAATCTGATATCATCAAATTTGTCTTGTTTGCAAATTGCTCCATTGTTGGCATGAATGTGAGTTTAATGTGGAACTCTGTCGGTTTCTATCAGATTGCTAAGCTGACTATGATCCCAGTATCTTGTCTCCTAGAGGTTGTATTGGACAATGTGCGATATTCCAGGGATACAAAGCTTAGTATTATCTTGGTTTTGGCTGGTGTTGCGGTCTGTACAGTCACTGATGTCAGCGTCAATGCTAAGGGTTTCATAGCTGCTGTCATAGCAGTTTGTAGCACAGCACTGCAGCAGTATTATGTGCATTTTCTTCAGAGGAAATATTCTATTGGATCATTTAACTTGTTGGGCCACACTGCACCAGCACAGGCAGCAAGTTTACTGCTAGTAGGCCCCTTTATGGACTATTGGCTGACAAACAAACGAGTTGACGCATACGACTATGGCTTGACATCCACTTTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGAACAAATCTCAGCCAGTTCATCTGCATTGGTAGGTTTACGGCCGTATCATTCCAAGTCCTTGGCCATATGAAGACTATTCTGGTCCTATTCATGGGGTTCATTTTCTTTGGAAAAGAGGGCCTCAATCTACATGTTGTTTTAGGCATGGCAATTGCAATTGCGGGAATGATTTGGTATGGCAATGCTTCTTCTAAGCCAGGGGGTAAGGAGCGCCGTAGCTTTTCCCTTCCTACCAGTAAAACACAAGATTATGCTGCGGTGCCTGTGTCCTCCGAATCAGTTGAGAAGGTATAA
Protein sequence

>Msa1385860

MSSASKGDRKASLDAASWLFNVVTSVGIILVNKALMATYGFSFATTLTGMHFATTTLLTVVLKSLGYIQTSHLPKSDIIKFVLFANCSIVGMNVSLMWNSVGFYQIAKLTMIPVSCLLEVVLDNVRYSRDTKLSIILVLAGVAVCTVTDVSVNAKGFIAAVIAVCSTALQQYYVHFLQRKYSIGSFNLLGHTAPAQAASLLLVGPFMDYWLTNKRVDAYDYGLTSTLFIILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLFMGFIFFGKEGLNLHVVLGMAIAIAGMIWYGNASSKPGGKERRSFSLPTSKTQDYAAVPVSSESVEKV*