Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0429700 | XP_039687709.1 | 96.350 | 1370 | 42 | 2 | 1 | 1362 | 1 | 1370 | 0.0 | 2759 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0429700 | sp|Q9C5X9|HAC1_ARATH | 47.804 | 797 | 382 | 10 | 581 | 1356 | 883 | 1666 | 0.0 | 776 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0429700 | G7J5R6 | 95.712 | 1376 | 45 | 3 | 1 | 1362 | 1 | 1376 | 0.0 | 2743 |
Gene ID | Type | Classification |
---|---|---|
Msa0429700 | TR | TAZ |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0429700 | Msa0429750 | 0.891799 | 2.856289e-74 | -8.615850e-47 |
Msa0429700 | Msa0500990 | 0.822144 | 2.771095e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0429700 | MtrunA17_Chr3g0133461 | 95.434 | 1314 | 40 | 4 | 64 | 1362 | 16 | 1324 | 0.0 | 2601 |
Msa0429700 | MtrunA17_Chr3g0138411 | 70.124 | 1051 | 236 | 14 | 319 | 1362 | 208 | 1187 | 0.0 | 1439 |
Msa0429700 | MtrunA17_Chr3g0138411 | 43.368 | 475 | 180 | 11 | 1 | 434 | 1 | 427 | 2.76e-87 | 310 |
Msa0429700 | MtrunA17_Chr5g0438991 | 70.467 | 921 | 190 | 11 | 448 | 1362 | 111 | 955 | 0.0 | 1263 |
Msa0429700 | MtrunA17_Chr6g0456861 | 68.811 | 824 | 188 | 10 | 543 | 1362 | 2 | 760 | 0.0 | 1130 |
Msa0429700 | MtrunA17_Chr6g0456861 | 53.968 | 63 | 22 | 1 | 19 | 81 | 7 | 62 | 1.67e-11 | 68.9 |
Msa0429700 | MtrunA17_Chr4g0000031 | 48.153 | 785 | 372 | 10 | 593 | 1356 | 908 | 1678 | 0.0 | 758 |
Msa0429700 | MtrunA17_Chr6g0456851 | 62.104 | 599 | 183 | 11 | 526 | 1087 | 242 | 833 | 0.0 | 719 |
Msa0429700 | MtrunA17_Chr6g0456851 | 39.224 | 232 | 87 | 8 | 16 | 234 | 3 | 193 | 4.04e-30 | 129 |
Msa0429700 | MtrunA17_Chr6g0456851 | 64.000 | 75 | 27 | 0 | 1129 | 1203 | 807 | 881 | 6.38e-22 | 103 |
Msa0429700 | MtrunA17_Chr6g0456931 | 74.286 | 245 | 63 | 0 | 796 | 1040 | 1 | 245 | 7.49e-129 | 397 |
Msa0429700 | MtrunA17_Chr5g0401991 | 60.993 | 282 | 43 | 6 | 1025 | 1300 | 1 | 221 | 1.45e-96 | 308 |
Msa0429700 | MtrunA17_Chr5g0402001 | 89.109 | 101 | 11 | 0 | 874 | 974 | 1 | 101 | 2.16e-57 | 193 |
Msa0429700 | MtrunA17_Chr1g0169961 | 53.191 | 188 | 55 | 4 | 501 | 683 | 9 | 168 | 2.35e-48 | 170 |
Msa0429700 | MtrunA17_Chr5g0439001 | 69.697 | 99 | 25 | 2 | 976 | 1074 | 1 | 94 | 1.52e-36 | 134 |
Msa0429700 | MtrunA17_Chr6g0456911 | 87.273 | 55 | 7 | 0 | 1141 | 1195 | 6 | 60 | 9.28e-26 | 102 |
Msa0429700 | MtrunA17_Chr0c02g0489811 | 85.965 | 57 | 8 | 0 | 1139 | 1195 | 5 | 61 | 2.10e-25 | 100 |
Msa0429700 | MtrunA17_Chr7g0229221 | 82.456 | 57 | 10 | 0 | 1139 | 1195 | 5 | 61 | 4.24e-24 | 97.4 |
Msa0429700 | MtrunA17_Chr0c02g0489731 | 78.947 | 57 | 12 | 0 | 1139 | 1195 | 5 | 61 | 1.24e-22 | 93.2 |
Msa0429700 | MtrunA17_Chr0c02g0489721 | 76.087 | 46 | 11 | 0 | 1069 | 1114 | 1 | 46 | 6.39e-20 | 84.3 |
Msa0429700 | MtrunA17_Chr7g0229231 | 76.087 | 46 | 11 | 0 | 1069 | 1114 | 1 | 46 | 6.39e-20 | 84.3 |
Msa0429700 | MtrunA17_Chr6g0456921 | 40.385 | 156 | 34 | 5 | 874 | 1028 | 1 | 98 | 3.72e-19 | 90.5 |
Msa0429700 | MtrunA17_Chr0c02g0489821 | 75.556 | 45 | 11 | 0 | 1071 | 1115 | 1 | 45 | 1.78e-18 | 80.1 |
Msa0429700 | MtrunA17_Chr6g0456941 | 48.515 | 101 | 31 | 2 | 526 | 623 | 149 | 231 | 1.67e-16 | 80.5 |
Msa0429700 | MtrunA17_Chr6g0456781 | 57.143 | 70 | 23 | 3 | 656 | 725 | 25 | 87 | 1.46e-15 | 75.1 |
Msa0429700 | MtrunA17_Chr5g0402011 | 87.097 | 31 | 4 | 0 | 720 | 750 | 21 | 51 | 3.59e-13 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0429700 | AT1G79000.2 | 47.804 | 797 | 382 | 10 | 581 | 1356 | 883 | 1666 | 0.0 | 776 |
Msa0429700 | AT1G79000.1 | 47.804 | 797 | 382 | 10 | 581 | 1356 | 883 | 1666 | 0.0 | 776 |
Msa0429700 | AT1G79000.3 | 47.804 | 797 | 382 | 10 | 581 | 1356 | 859 | 1642 | 0.0 | 776 |
Msa0429700 | AT1G16710.1 | 47.679 | 797 | 383 | 10 | 581 | 1356 | 892 | 1675 | 0.0 | 769 |
Msa0429700 | AT1G16710.2 | 47.679 | 797 | 383 | 10 | 581 | 1356 | 863 | 1646 | 0.0 | 769 |
Msa0429700 | AT1G16710.3 | 47.679 | 797 | 383 | 10 | 581 | 1356 | 866 | 1649 | 0.0 | 768 |
Msa0429700 | AT1G16710.6 | 47.679 | 797 | 383 | 10 | 581 | 1356 | 827 | 1610 | 0.0 | 768 |
Msa0429700 | AT1G16710.10 | 47.679 | 797 | 383 | 10 | 581 | 1356 | 866 | 1649 | 0.0 | 768 |
Msa0429700 | AT1G16710.8 | 47.679 | 797 | 383 | 10 | 581 | 1356 | 866 | 1649 | 0.0 | 768 |
Msa0429700 | AT1G16710.4 | 47.679 | 797 | 383 | 10 | 581 | 1356 | 827 | 1610 | 0.0 | 768 |
Msa0429700 | AT1G16710.7 | 47.679 | 797 | 383 | 10 | 581 | 1356 | 866 | 1649 | 0.0 | 768 |
Msa0429700 | AT1G16710.5 | 47.679 | 797 | 383 | 10 | 581 | 1356 | 827 | 1610 | 0.0 | 768 |
Msa0429700 | AT3G12980.1 | 45.299 | 819 | 405 | 15 | 565 | 1362 | 848 | 1644 | 0.0 | 727 |
Msa0429700 | AT3G12980.2 | 45.299 | 819 | 405 | 15 | 565 | 1362 | 767 | 1563 | 0.0 | 726 |
Msa0429700 | AT1G55970.1 | 41.049 | 877 | 463 | 16 | 522 | 1362 | 588 | 1446 | 0.0 | 650 |
Msa0429700 | AT1G55970.2 | 41.277 | 877 | 447 | 17 | 522 | 1362 | 588 | 1432 | 0.0 | 647 |
Msa0429700 | AT1G67220.1 | 41.762 | 783 | 401 | 18 | 602 | 1354 | 604 | 1361 | 0.0 | 605 |
Msa0429700 | AT1G16710.9 | 49.820 | 556 | 265 | 6 | 581 | 1125 | 866 | 1418 | 9.85e-177 | 565 |
Find 280 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACTCTTTGTCCTTCTTTC+AGG | 0.058574 | 3_2:-81173999 | None:intergenic |
CCCTGGTAGGCCATATATTT+TGG | 0.151804 | 3_2:-81174989 | None:intergenic |
CAAGCTTATCATTTAATAAA+TGG | 0.192045 | 3_2:+81176402 | Msa0429700:three_prime_UTR |
TTACTGAAGGCTGCTAATTT+TGG | 0.192321 | 3_2:+81173200 | Msa0429700:CDS |
AGAGTAGATTATTTGAAAAT+AGG | 0.198691 | 3_2:+81175455 | Msa0429700:CDS |
TCTCACATTTCCAGCTCTTT+TGG | 0.200246 | 3_2:-81175633 | None:intergenic |
GAAAGTGAATAAGCAGTTTC+TGG | 0.202627 | 3_2:+81173644 | Msa0429700:CDS |
TTCTTCTCTTGATCAACTTT+TGG | 0.216290 | 3_2:-81172081 | None:intergenic |
TTACGGTTGTATACCATTTC+AGG | 0.223859 | 3_2:-81170330 | None:intergenic |
AATTCTGAATGTTGCACTTT+TGG | 0.226098 | 3_2:-81171406 | None:intergenic |
AAATGGTATACAACCGTAAT+TGG | 0.232510 | 3_2:+81170334 | Msa0429700:CDS |
CACTGAATGCAAGGAAATTC+AGG | 0.241855 | 3_2:+81175091 | Msa0429700:CDS |
TGTAACTTACCTGTTTCTTA+TGG | 0.254857 | 3_2:+81170862 | Msa0429700:CDS |
GATGACAAACAAAATAAAAT+TGG | 0.261822 | 3_2:+81172216 | Msa0429700:CDS |
AAAATGATGGATTCAGGTTT+TGG | 0.264675 | 3_2:+81171307 | Msa0429700:CDS |
ATTAGGTTGGCCAAAATATA+TGG | 0.272286 | 3_2:+81174979 | Msa0429700:intron |
TATCCCTCCAGTTGCTGATA+TGG | 0.276376 | 3_2:+81170831 | Msa0429700:CDS |
AATGTCTTTGGCAGTGTCTT+TGG | 0.279840 | 3_2:-81174743 | None:intergenic |
CCAGAACTTATTACAATTGA+TGG | 0.286120 | 3_2:+81171979 | Msa0429700:CDS |
CGCTCAAAAGAAATTGAAAA+TGG | 0.288181 | 3_2:+81173164 | Msa0429700:CDS |
GAGTAGATTATTTGAAAATA+GGG | 0.292484 | 3_2:+81175456 | Msa0429700:CDS |
TTTGAGTCAACTTGTGTTCA+TGG | 0.292920 | 3_2:-81175711 | None:intergenic |
AATTCATCAAAACATCTCTT+TGG | 0.303541 | 3_2:-81170267 | None:intergenic |
AAAACTGATGAAGAATTTCT+TGG | 0.304548 | 3_2:-81170231 | None:intergenic |
ATGGTCTTTAAAGCTCTATT+TGG | 0.306293 | 3_2:-81174703 | None:intergenic |
ATACAGAAAATGATGGATTC+AGG | 0.307913 | 3_2:+81171301 | Msa0429700:CDS |
AGCCTATTCCTACTGCATTC+TGG | 0.312043 | 3_2:+81171728 | Msa0429700:CDS |
TCCTATAATACTGGTTACTA+TGG | 0.313926 | 3_2:+81170736 | Msa0429700:CDS |
CTACAACAACAGAAGAGATT+TGG | 0.316078 | 3_2:+81173109 | Msa0429700:CDS |
TCGCATCACTAAAATGTCTT+TGG | 0.318012 | 3_2:-81174755 | None:intergenic |
GGAATGTATGTCCAGGAGTT+TGG | 0.324631 | 3_2:+81173906 | Msa0429700:CDS |
TCAGGAGTCAAATGAGAAAA+TGG | 0.324783 | 3_2:+81175786 | Msa0429700:CDS |
CTTCGTTTACCATGAGATAT+TGG | 0.325834 | 3_2:+81174037 | Msa0429700:CDS |
CCTTTCGAGGGAATCAGTTT+AGG | 0.326996 | 3_2:-81171868 | None:intergenic |
CCATCAATTGTAATAAGTTC+TGG | 0.331586 | 3_2:-81171979 | None:intergenic |
TTTGTTTGCTTCTCTTGATC+AGG | 0.340519 | 3_2:-81172288 | None:intergenic |
AATGTAATGGTTGATACATT+TGG | 0.340524 | 3_2:+81171517 | Msa0429700:CDS |
GTTTCCTGACTTGCTACATA+TGG | 0.342073 | 3_2:+81174198 | Msa0429700:CDS |
GTTCCACATTACTCTCATAA+TGG | 0.342403 | 3_2:-81171444 | None:intergenic |
GGATGTGGTTGAAAAGAATA+AGG | 0.343529 | 3_2:-81171385 | None:intergenic |
TCTCGTTTGCCATACTTTGA+TGG | 0.348808 | 3_2:+81174589 | Msa0429700:CDS |
TTCATCTTGGTGGGAGTACT+TGG | 0.349443 | 3_2:+81170199 | Msa0429700:CDS |
CTTTAGCATCTGTCCCCTCT+TGG | 0.355618 | 3_2:-81172245 | None:intergenic |
GCCATAGTAACCAGTATTAT+AGG | 0.357708 | 3_2:-81170737 | None:intergenic |
CATTTGCTCTGCATGCTATA+AGG | 0.358326 | 3_2:+81175672 | Msa0429700:CDS |
GGCAGTGTCTTTGGAAGGAT+TGG | 0.359255 | 3_2:-81174734 | None:intergenic |
GTGCGAAATTCGAGTGAATC+GGG | 0.363640 | 3_2:+81176012 | Msa0429700:CDS |
TCAGCGTGTGCAAGCTCTAC+TGG | 0.369624 | 3_2:+81170702 | Msa0429700:CDS |
GGATGAGATATTCCCGCTTC+TGG | 0.370448 | 3_2:-81170763 | None:intergenic |
TTTCTGTAGAAAAGAAGAAT+TGG | 0.372012 | 3_2:+81172821 | Msa0429700:CDS |
GAGGACATACAAGGAAGAAT+TGG | 0.373626 | 3_2:+81172015 | Msa0429700:CDS |
TGGTCACTTAGCACGGTTCT+TGG | 0.373788 | 3_2:-81173236 | None:intergenic |
TTCTTATGGTGGAAGCAATC+TGG | 0.380010 | 3_2:+81170876 | Msa0429700:CDS |
ATGCCATAGATTAGGGAATC+TGG | 0.384722 | 3_2:-81171919 | None:intergenic |
TCTTGATTTGAGAACAGTTT+GGG | 0.392126 | 3_2:-81175967 | None:intergenic |
GTCTATCATGCCATAGATTA+GGG | 0.394178 | 3_2:-81171926 | None:intergenic |
TTCTTTGTTGCTGCTGAGAA+AGG | 0.394757 | 3_2:+81174547 | Msa0429700:CDS |
AGTCTATCATGCCATAGATT+AGG | 0.395208 | 3_2:-81171927 | None:intergenic |
TCTCAGAAAGGAATCTGTTC+TGG | 0.396892 | 3_2:+81172389 | Msa0429700:CDS |
AAAAGAAGAATTGGATGTAC+AGG | 0.398942 | 3_2:+81172830 | Msa0429700:CDS |
CTTCTGTTTCAGCAGATTGA+AGG | 0.398990 | 3_2:+81173864 | Msa0429700:CDS |
ACTGAAGAAAATATTGTTGT+TGG | 0.399474 | 3_2:+81174502 | Msa0429700:CDS |
GATATATCAATCTGGGAATC+AGG | 0.403548 | 3_2:+81175768 | Msa0429700:CDS |
GAGCCAGATTCCCTAATCTA+TGG | 0.403562 | 3_2:+81171916 | Msa0429700:CDS |
TTTCATTCTGCGGGAGTTAA+GGG | 0.405364 | 3_2:+81171484 | Msa0429700:CDS |
ATGGATCCTATTCCTACTAA+TGG | 0.406298 | 3_2:+81171631 | Msa0429700:CDS |
GTTCCTAAGTCCTATAATAC+TGG | 0.409319 | 3_2:+81170727 | Msa0429700:CDS |
CAGCAGTCTCCATCAAAGTA+TGG | 0.411615 | 3_2:-81174598 | None:intergenic |
GAGTTCACAGTTCAAATAGT+TGG | 0.411786 | 3_2:+81176375 | Msa0429700:three_prime_UTR |
CTTGGTGAGAGTAGGCATAC+TGG | 0.412661 | 3_2:-81171704 | None:intergenic |
TTGATCAGGTGTTAGTTCAC+TGG | 0.412828 | 3_2:-81172274 | None:intergenic |
TTCTTGATTTGAGAACAGTT+TGG | 0.414152 | 3_2:-81175968 | None:intergenic |
CACTCGAATTTCGCACCTAC+TGG | 0.416982 | 3_2:-81176005 | None:intergenic |
TCAGAGTAGGATTGTGTAGA+TGG | 0.417165 | 3_2:-81175564 | None:intergenic |
CGAGTTGCATACACTTTGTC+AGG | 0.417455 | 3_2:+81175297 | Msa0429700:CDS |
CATATTGCAAGTGAGCTATA+AGG | 0.418930 | 3_2:-81175019 | None:intergenic |
CGCATTCAGAGCCAAACTCC+TGG | 0.419362 | 3_2:-81173917 | None:intergenic |
GCCTGTGCTCCTTCAAGAAA+AGG | 0.420899 | 3_2:+81174221 | Msa0429700:CDS |
TTTCCTGACTTGCTACATAT+GGG | 0.421164 | 3_2:+81174199 | Msa0429700:CDS |
CCACAACATGAACAAACAAT+TGG | 0.421500 | 3_2:-81172777 | None:intergenic |
TCAAGACCGATATATCAATC+TGG | 0.421778 | 3_2:+81175760 | Msa0429700:CDS |
TGTATATCCTCTCCATTAGT+AGG | 0.423314 | 3_2:-81171643 | None:intergenic |
GATCAACTTCCACTGAGTTT+CGG | 0.425661 | 3_2:-81171951 | None:intergenic |
GGTGGGAAAATCACATTCAA+TGG | 0.426047 | 3_2:+81172888 | Msa0429700:CDS |
CGATGAAGTACTTGAAGAAC+CGG | 0.433225 | 3_2:+81172950 | Msa0429700:CDS |
GCAATATCAACCACAGAAGT+TGG | 0.433488 | 3_2:+81171195 | Msa0429700:CDS |
TGATTCCCAGATTGATATAT+CGG | 0.436292 | 3_2:-81175766 | None:intergenic |
AAGGGTGCGCATCAGAACTA+TGG | 0.436516 | 3_2:-81175264 | None:intergenic |
TGCAACTCGCCATTCTTTGA+AGG | 0.439300 | 3_2:-81175283 | None:intergenic |
CGGCGTAGCTTATCATTCTT+CGG | 0.441625 | 3_2:-81174287 | None:intergenic |
CTCTAGGAATTGCAAAGACT+TGG | 0.444404 | 3_2:+81176078 | Msa0429700:CDS |
ATGTATACACAACGCTGATT+CGG | 0.444563 | 3_2:-81173945 | None:intergenic |
GACCATCATCGAGGAATACT+TGG | 0.446298 | 3_2:-81175536 | None:intergenic |
TCTTTGTTGCTGCTGAGAAA+GGG | 0.448017 | 3_2:+81174548 | Msa0429700:CDS |
GACAGACAGTTGCAAATCAA+TGG | 0.448888 | 3_2:+81172125 | Msa0429700:CDS |
ATCATTCAGAATGAGCAACT+TGG | 0.449014 | 3_2:+81170478 | Msa0429700:CDS |
ATCATTATGTTTAGTGTTGG+AGG | 0.449050 | 3_2:-81175422 | None:intergenic |
GCCAAAATATATGGCCTACC+AGG | 0.452024 | 3_2:+81174988 | Msa0429700:CDS |
CCTGTGCTCCTTCAAGAAAA+GGG | 0.454880 | 3_2:+81174222 | Msa0429700:CDS |
TTGCTTCCACCATAAGAAAC+AGG | 0.456261 | 3_2:-81170871 | None:intergenic |
TCCTCAGTTACAACTGTTAG+TGG | 0.459002 | 3_2:+81171808 | Msa0429700:CDS |
AGGGATCTTCCCATTGTAGT+AGG | 0.461958 | 3_2:-81171106 | None:intergenic |
TTATTCCATTGATCAAAACT+TGG | 0.465205 | 3_2:-81171349 | None:intergenic |
CATCAATTGTAATAAGTTCT+GGG | 0.467890 | 3_2:-81171978 | None:intergenic |
CTTATAGCATGCAGAGCAAA+TGG | 0.467941 | 3_2:-81175671 | None:intergenic |
CAAACTGAAACTGAGACTTC+TGG | 0.468204 | 3_2:-81175498 | None:intergenic |
TACTATGGCGTGCCAGAAGC+GGG | 0.468456 | 3_2:+81170751 | Msa0429700:CDS |
TGAGCAACTTGGGCCTGCGC+TGG | 0.468657 | 3_2:+81170489 | Msa0429700:CDS |
TGCCGTGAAGTGATAGTGTC+TGG | 0.468924 | 3_2:+81175053 | Msa0429700:CDS |
TTTGATGGAGACTGCTGGTC+TGG | 0.471841 | 3_2:+81174604 | Msa0429700:CDS |
TAAAACTTGAATCTTCAGAT+TGG | 0.472509 | 3_2:-81171129 | None:intergenic |
AATATCATTATGTTTAGTGT+TGG | 0.474871 | 3_2:-81175425 | None:intergenic |
AGCACATCCATATCAGCAAC+TGG | 0.475712 | 3_2:-81170838 | None:intergenic |
TTCTTCAAGTACTTCATCGT+TGG | 0.477109 | 3_2:-81172946 | None:intergenic |
GTCCAGAATGCAGTAGGAAT+AGG | 0.478712 | 3_2:-81171730 | None:intergenic |
GATCTATAAGAGAATTCAGC+AGG | 0.480043 | 3_2:-81173690 | None:intergenic |
TCCTCTCCATTAGTAGGAAT+AGG | 0.482957 | 3_2:-81171637 | None:intergenic |
TTATACTTGCTGCTCACTCT+AGG | 0.483492 | 3_2:+81176062 | Msa0429700:CDS |
GGCAGGTTATGAGCAATAGA+AGG | 0.483523 | 3_2:-81170784 | None:intergenic |
ACTTACCAATGCTGCTTCAA+AGG | 0.483696 | 3_2:+81170522 | Msa0429700:CDS |
AGGCCCATATGTAGCAAGTC+AGG | 0.483952 | 3_2:-81174202 | None:intergenic |
AACTTGAATCTTCAGATTGG+AGG | 0.484803 | 3_2:-81171126 | None:intergenic |
ACCAGCTTCTAAGCCTTTCG+AGG | 0.488323 | 3_2:-81171881 | None:intergenic |
ATTACTTCTGAGGAGGAAGC+AGG | 0.490995 | 3_2:+81172696 | Msa0429700:CDS |
GGTGCGAAATTCGAGTGAAT+CGG | 0.490997 | 3_2:+81176011 | Msa0429700:CDS |
TCATCAAAACATCTCTTTGG+CGG | 0.493031 | 3_2:-81170264 | None:intergenic |
CTGGCGGTATCATCCTGAAA+TGG | 0.493874 | 3_2:+81170317 | Msa0429700:CDS |
TCCCAGACACTATCACTTCA+CGG | 0.494548 | 3_2:-81175055 | None:intergenic |
GGAAGGATTGGCATGTCCCA+TGG | 0.498688 | 3_2:-81174722 | None:intergenic |
AAATCAATGGAAATTGACAT+TGG | 0.499856 | 3_2:+81172138 | Msa0429700:CDS |
TCAGCAGGGTAATTCTCCTC+TGG | 0.499997 | 3_2:-81173675 | None:intergenic |
AATCAATGGAAATTGACATT+GGG | 0.503687 | 3_2:+81172139 | Msa0429700:CDS |
ACATCATAGCTTTCAAGCCC+TGG | 0.503981 | 3_2:-81171544 | None:intergenic |
CATTATGTTTAGTGTTGGAG+GGG | 0.505283 | 3_2:-81175420 | None:intergenic |
GTTGATACATTTGGACAGCC+AGG | 0.507113 | 3_2:+81171526 | Msa0429700:CDS |
GATGCGCACCCTTCAAAGAA+TGG | 0.507431 | 3_2:+81175274 | Msa0429700:CDS |
CTCATAATGGAGAGAAGAGA+GGG | 0.508941 | 3_2:-81171431 | None:intergenic |
TAGGATTGTGTAGATGGTAG+AGG | 0.509799 | 3_2:-81175558 | None:intergenic |
TTCTAAGTGGTCACTTAGCA+CGG | 0.510372 | 3_2:-81173243 | None:intergenic |
TTGTAGGTTATAGCTGCAAA+AGG | 0.511094 | 3_2:+81173582 | Msa0429700:intron |
AGTGTAGCATTCCACGGTGC+AGG | 0.512236 | 3_2:+81176101 | Msa0429700:CDS |
ATGTGTGAACAAATCAATCA+AGG | 0.513659 | 3_2:-81172340 | None:intergenic |
TGCCAAAATACAGAAAATGA+TGG | 0.514444 | 3_2:+81171294 | Msa0429700:CDS |
TGCAGTAGGAATAGGCTCCT+TGG | 0.514495 | 3_2:-81171722 | None:intergenic |
ACAAACCTTTGAAGCAGCAT+TGG | 0.514651 | 3_2:-81170527 | None:intergenic |
ATGTGTTACAAGACTTCTAA+AGG | 0.514902 | 3_2:+81172867 | Msa0429700:CDS |
AGACTATGAAAAGATGTTGA+AGG | 0.515920 | 3_2:+81174672 | Msa0429700:CDS |
CCCTCGAAAGGCTTAGAAGC+TGG | 0.515949 | 3_2:+81171880 | Msa0429700:CDS |
CACGCTGATTCAATGTCTCC+AGG | 0.517950 | 3_2:-81170687 | None:intergenic |
TCATTATGTTTAGTGTTGGA+GGG | 0.517970 | 3_2:-81175421 | None:intergenic |
ACTTGAATCTTCAGATTGGA+GGG | 0.518206 | 3_2:-81171125 | None:intergenic |
TTTAACACAGATTACTTCTG+AGG | 0.520413 | 3_2:+81172686 | Msa0429700:intron |
TCCATTGATCAAAACTTGGA+TGG | 0.525144 | 3_2:-81171345 | None:intergenic |
CTTTGTTGCTGCTGAGAAAG+GGG | 0.525499 | 3_2:+81174549 | Msa0429700:CDS |
GTGGGAAAATCACATTCAAT+GGG | 0.525911 | 3_2:+81172889 | Msa0429700:CDS |
CCAATTGTTTGTTCATGTTG+TGG | 0.526305 | 3_2:+81172777 | Msa0429700:CDS |
CAAGACCGATATATCAATCT+GGG | 0.526622 | 3_2:+81175761 | Msa0429700:CDS |
TATGTCCTCTCAATCTGCCT+CGG | 0.527546 | 3_2:+81171150 | Msa0429700:CDS |
CATGTCGAGACATTGCATCC+TGG | 0.528409 | 3_2:-81171611 | None:intergenic |
AACTTACCTGTTTCTTATGG+TGG | 0.529340 | 3_2:+81170865 | Msa0429700:CDS |
CAGCGTGTGCAAGCTCTACT+GGG | 0.531640 | 3_2:+81170703 | Msa0429700:CDS |
CTGCTGGTCTGGTAATGCTA+TGG | 0.533073 | 3_2:+81174615 | Msa0429700:CDS |
TTGTCACGGGTATAAAATCC+AGG | 0.533640 | 3_2:+81171593 | Msa0429700:CDS |
GGGGATAAACACCAATGTAA+TGG | 0.535712 | 3_2:+81171504 | Msa0429700:CDS |
GATGAATTAAGCAATCAAGT+AGG | 0.536338 | 3_2:+81170282 | Msa0429700:CDS |
GCAAAGTGGGAAAATGTTGA+AGG | 0.536852 | 3_2:+81173299 | Msa0429700:CDS |
CATGAACAAACAATTGGTAC+TGG | 0.538233 | 3_2:-81172771 | None:intergenic |
AATTTAAACAATATTGTCAC+GGG | 0.538538 | 3_2:+81171580 | Msa0429700:CDS |
TTCTGAAAATCCAACTTCTG+TGG | 0.541275 | 3_2:-81171205 | None:intergenic |
TTTCAAATAATCTACTCTCA+AGG | 0.542071 | 3_2:-81175450 | None:intergenic |
TGCCAAGTATTCCTCGATGA+TGG | 0.542961 | 3_2:+81175534 | Msa0429700:CDS |
GCATTTGTCCAGAATGCAGT+AGG | 0.543207 | 3_2:-81171736 | None:intergenic |
GCAACCTTGCTTATGAGAGC+AGG | 0.546870 | 3_2:-81172177 | None:intergenic |
ACAATGTATTCCAAAAGAGC+TGG | 0.547262 | 3_2:+81175623 | Msa0429700:CDS |
TTGATCAAATGTTAGCTCAT+CGG | 0.547616 | 3_2:-81171770 | None:intergenic |
ACATACAGTTATTTGCGTGT+TGG | 0.550948 | 3_2:-81170936 | None:intergenic |
CAATTTAAACAATATTGTCA+CGG | 0.551389 | 3_2:+81171579 | Msa0429700:CDS |
TCATTCAGAATGAGCAACTT+GGG | 0.553426 | 3_2:+81170479 | Msa0429700:CDS |
TTTACAACAGTCATCAGAGT+AGG | 0.553593 | 3_2:-81175577 | None:intergenic |
TGCTGAGAAAGGGGACTCCA+AGG | 0.553735 | 3_2:+81174558 | Msa0429700:CDS |
AGGGAACGAGAATCTTGATA+AGG | 0.553771 | 3_2:+81173319 | Msa0429700:CDS |
CATACTTTGATGGAGACTGC+TGG | 0.554044 | 3_2:+81174599 | Msa0429700:CDS |
TCTGCATGCTATAAGGATAG+AGG | 0.554961 | 3_2:+81175679 | Msa0429700:CDS |
ATCTGCCTCGGTGAATACTT+CGG | 0.556680 | 3_2:+81171162 | Msa0429700:CDS |
AATGCAATAAATGCAAAAGA+TGG | 0.558178 | 3_2:+81173066 | Msa0429700:CDS |
AGCGAGAAGATGTTTGCCAA+GGG | 0.559968 | 3_2:+81170174 | None:intergenic |
ACACATGCCAATTATGTGAA+AGG | 0.560127 | 3_2:+81172730 | Msa0429700:CDS |
TCTTTGGCAGTGTCTTTGGA+AGG | 0.560134 | 3_2:-81174739 | None:intergenic |
AAAATTGGATTCAACCAAGA+GGG | 0.562248 | 3_2:+81172231 | Msa0429700:CDS |
CACAAAGATTCATTGATCAA+CGG | 0.562806 | 3_2:-81176346 | None:intergenic |
AGGAAATTCAGGAGTGCGAA+AGG | 0.562968 | 3_2:+81175102 | Msa0429700:CDS |
ATGGATTCAGTATTATCAGA+AGG | 0.564182 | 3_2:-81171262 | None:intergenic |
CATGCAAGAGAGAGCAAAGT+GGG | 0.567140 | 3_2:+81173286 | Msa0429700:CDS |
GAACCATCACCAGGAAAACA+AGG | 0.569408 | 3_2:-81170805 | None:intergenic |
AGTAGCAATATTTCCAGCGC+AGG | 0.569879 | 3_2:-81170502 | None:intergenic |
GAACAGTTTGGGTGAGAGCA+AGG | 0.570733 | 3_2:-81175956 | None:intergenic |
TAAAATTGGATTCAACCAAG+AGG | 0.570792 | 3_2:+81172230 | Msa0429700:CDS |
TGCAACTGTCTGTCACGACA+TGG | 0.574615 | 3_2:-81172116 | None:intergenic |
TGATCAATGGAATAATGGGA+TGG | 0.574870 | 3_2:+81171357 | Msa0429700:CDS |
GCAACTCGCCATTCTTTGAA+GGG | 0.578144 | 3_2:-81175282 | None:intergenic |
TAACCAGTATTATAGGACTT+AGG | 0.578545 | 3_2:-81170730 | None:intergenic |
ACATATTAATAGTCTCAGAA+AGG | 0.580375 | 3_2:+81172377 | Msa0429700:CDS |
GTTGCTAATTGATCTGATGT+TGG | 0.582522 | 3_2:-81170902 | None:intergenic |
AAGGTTCAGCATTAGCTGCA+CGG | 0.583631 | 3_2:-81175937 | None:intergenic |
TTCATTCTGCGGGAGTTAAG+GGG | 0.586503 | 3_2:+81171485 | Msa0429700:CDS |
CAGGATGCAATGTCTCGACA+TGG | 0.588607 | 3_2:+81171612 | Msa0429700:CDS |
AAGCGAGAAGATGTTTGCCA+AGG | 0.589431 | 3_2:+81170173 | None:intergenic |
GGGATAGATGAACCATCACC+AGG | 0.589609 | 3_2:-81170814 | None:intergenic |
CCCACCAAGATGAAAACCCT+TGG | 0.589685 | 3_2:-81170190 | None:intergenic |
TGATAGTGTCTGGGAAGCGA+TGG | 0.590031 | 3_2:+81175063 | Msa0429700:CDS |
TTACTATGGCGTGCCAGAAG+CGG | 0.592212 | 3_2:+81170750 | Msa0429700:CDS |
CCTGAAAGAAGGACAAAGAG+TGG | 0.592455 | 3_2:+81173999 | Msa0429700:CDS |
AAATAGAGCTTTAAAGACCA+TGG | 0.593540 | 3_2:+81174705 | Msa0429700:CDS |
CAAACGAGAAGCTGTCACCT+TGG | 0.594598 | 3_2:-81174575 | None:intergenic |
AAGTAGGATTCTCCTCAGAC+TGG | 0.594890 | 3_2:+81170298 | Msa0429700:CDS |
CTTTAGCGTCTGTCCCCTCG+TGG | 0.599122 | 3_2:-81172044 | None:intergenic |
TCCTATTCCTACTAATGGAG+AGG | 0.602402 | 3_2:+81171636 | Msa0429700:CDS |
AAATGTATCAACCATTACAT+TGG | 0.602722 | 3_2:-81171515 | None:intergenic |
CCCACTAACAGTTGTAACTG+AGG | 0.603428 | 3_2:-81171809 | None:intergenic |
AACACAGATTACTTCTGAGG+AGG | 0.604308 | 3_2:+81172689 | Msa0429700:intron |
AAAGAAGAATTGGATGTACA+GGG | 0.605113 | 3_2:+81172831 | Msa0429700:CDS |
CCAAAATATATGGCCTACCA+GGG | 0.605422 | 3_2:+81174989 | Msa0429700:CDS |
TTACTTCTGAGGAGGAAGCA+GGG | 0.608500 | 3_2:+81172697 | Msa0429700:CDS |
ATTCACCGAGGCAGATTGAG+AGG | 0.610362 | 3_2:-81171155 | None:intergenic |
CTGTGCTCCTTCAAGAAAAG+GGG | 0.610873 | 3_2:+81174223 | Msa0429700:CDS |
GCTTGAAAGCTATGATGTGA+TGG | 0.612988 | 3_2:+81171549 | Msa0429700:CDS |
GATGATGAAGAGGACATACA+AGG | 0.616251 | 3_2:+81172006 | Msa0429700:CDS |
CATCACCAGGAAAACAAGGC+AGG | 0.617573 | 3_2:-81170801 | None:intergenic |
CAGGAGTTTGGCTCTGAATG+CGG | 0.618695 | 3_2:+81173918 | Msa0429700:CDS |
TGGATTCAGTATTATCAGAA+GGG | 0.619302 | 3_2:-81171261 | None:intergenic |
AATAGAGCTTTAAAGACCAT+GGG | 0.619881 | 3_2:+81174706 | Msa0429700:CDS |
TTGATACATTTGGACAGCCA+GGG | 0.623297 | 3_2:+81171527 | Msa0429700:CDS |
CAAAGTGGGAAAATGTTGAA+GGG | 0.624977 | 3_2:+81173300 | Msa0429700:CDS |
TGCGAAATTCGAGTGAATCG+GGG | 0.624993 | 3_2:+81176013 | Msa0429700:CDS |
TCTCCATTATGAGAGTAATG+TGG | 0.625625 | 3_2:+81171441 | Msa0429700:CDS |
GCAGGAGGAATATATGAACC+TGG | 0.625899 | 3_2:+81170669 | Msa0429700:intron |
CCTCAGTTACAACTGTTAGT+GGG | 0.626164 | 3_2:+81171809 | Msa0429700:CDS |
TGATGGTGATGATGATGAAG+AGG | 0.626309 | 3_2:+81171996 | Msa0429700:CDS |
CCAGCTTCTAAGCCTTTCGA+GGG | 0.626326 | 3_2:-81171880 | None:intergenic |
GTTACAAGACTTCTAAAGGT+GGG | 0.626500 | 3_2:+81172871 | Msa0429700:CDS |
CCTAAACTGATTCCCTCGAA+AGG | 0.627647 | 3_2:+81171868 | Msa0429700:CDS |
CATGGTAAACGAAGGTACGA+AGG | 0.628852 | 3_2:-81174028 | None:intergenic |
TTTAGAAGTCTTGTAACACA+TGG | 0.632450 | 3_2:-81172865 | None:intergenic |
GCAGAGCAAATGGTACACTC+TGG | 0.633761 | 3_2:-81175661 | None:intergenic |
TCTCATAATGGAGAGAAGAG+AGG | 0.633876 | 3_2:-81171432 | None:intergenic |
CATCCATATCAGCAACTGGA+GGG | 0.633921 | 3_2:-81170834 | None:intergenic |
AAAGCATGCTCACTTACTGA+AGG | 0.634634 | 3_2:+81173187 | Msa0429700:CDS |
ATGGTAAACGAAGGTACGAA+GGG | 0.635264 | 3_2:-81174027 | None:intergenic |
CAGTATGCCTACTCTCACCA+AGG | 0.636206 | 3_2:+81171705 | Msa0429700:CDS |
TATGCCTGCTCTCATAAGCA+AGG | 0.636968 | 3_2:+81172173 | Msa0429700:CDS |
AGGATGATACCGCCAGTCTG+AGG | 0.637708 | 3_2:-81170310 | None:intergenic |
TGTTACAAGACTTCTAAAGG+TGG | 0.638383 | 3_2:+81172870 | Msa0429700:CDS |
ACTTGGAGTGTAGCATTCCA+CGG | 0.640972 | 3_2:+81176095 | Msa0429700:CDS |
AAAGAAATGATCATATACGT+TGG | 0.641068 | 3_2:-81174530 | None:intergenic |
TGGAATTTAATCTGATGCCG+TGG | 0.642107 | 3_2:-81171684 | None:intergenic |
GCCGTGAAGTGATAGTGTCT+GGG | 0.643577 | 3_2:+81175054 | Msa0429700:CDS |
GATAGACTGCCGAAACTCAG+TGG | 0.644616 | 3_2:+81171942 | Msa0429700:CDS |
ACTAATGGAGAGGATATACA+AGG | 0.650656 | 3_2:+81171646 | Msa0429700:CDS |
ATTAACAACATGTCTAACAG+TGG | 0.650867 | 3_2:-81171233 | None:intergenic |
ATAGGCTCCTTGGTGAGAGT+AGG | 0.651101 | 3_2:-81171712 | None:intergenic |
GTTTCTGGATATCATTCCAG+AGG | 0.661258 | 3_2:+81173659 | Msa0429700:CDS |
TAGGATTCTCCTCAGACTGG+CGG | 0.662995 | 3_2:+81170301 | Msa0429700:CDS |
CAATATCTCATGGTAAACGA+AGG | 0.666016 | 3_2:-81174036 | None:intergenic |
AGAATTGGATTCAACCACGA+GGG | 0.666202 | 3_2:+81172030 | Msa0429700:CDS |
CGAAGAATGATAAGCTACGC+CGG | 0.667085 | 3_2:+81174288 | Msa0429700:CDS |
AGCTGTTCTCTCATGCCAGT+AGG | 0.676221 | 3_2:+81175990 | Msa0429700:CDS |
ATCTATAAGAGAATTCAGCA+GGG | 0.680316 | 3_2:-81173689 | None:intergenic |
TCGAGGAATACTTGGCACGA+CGG | 0.681417 | 3_2:-81175528 | None:intergenic |
AAATTGGATTCAACCAAGAG+GGG | 0.683045 | 3_2:+81172232 | Msa0429700:CDS |
GGCAGAACTAAATTTGACCA+CGG | 0.684062 | 3_2:+81171667 | Msa0429700:CDS |
GAATTGGATTCAACCACGAG+GGG | 0.685446 | 3_2:+81172031 | Msa0429700:CDS |
AGAATGATAAGCTACGCCGG+TGG | 0.695717 | 3_2:+81174291 | Msa0429700:CDS |
TCATAATGGAGAGAAGAGAG+GGG | 0.696827 | 3_2:-81171430 | None:intergenic |
GGAGGGGATATCATCAACAA+CGG | 0.699125 | 3_2:-81175404 | None:intergenic |
ACATCCATATCAGCAACTGG+AGG | 0.703827 | 3_2:-81170835 | None:intergenic |
TCATGCAAGAGAGAGCAAAG+TGG | 0.716033 | 3_2:+81173285 | Msa0429700:CDS |
ATAACAACACACCTGCACCG+TGG | 0.731435 | 3_2:-81176112 | None:intergenic |
ATGGTAGAGGACCATCATCG+AGG | 0.748774 | 3_2:-81175545 | None:intergenic |
AAGAATTGGATTCAACCACG+AGG | 0.755598 | 3_2:+81172029 | Msa0429700:CDS |
ATCTTCCGAAGTATTCACCG+AGG | 0.761656 | 3_2:-81171167 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATATA+AGG | - | chr3_2:81173482-81173501 | None:intergenic | 0.0% |
!! | TAATTGTTAAAATAGAATTA+TGG | - | chr3_2:81172665-81172684 | None:intergenic | 10.0% |
!!! | ATTTAATTTTCAAAGAAATG+TGG | + | chr3_2:81170384-81170403 | Msa0429700:intron | 15.0% |
!! | ATTATGTAAATAACTTAAAC+TGG | - | chr3_2:81174920-81174939 | None:intergenic | 15.0% |
!!! | TTTTTCTTCTTATCCAATTA+CGG | - | chr3_2:81170350-81170369 | None:intergenic | 20.0% |
!!! | CAATTGTTTTTCTACAAATT+TGG | + | chr3_2:81170647-81170666 | Msa0429700:intron | 20.0% |
!! | CAATTTAAACAATATTGTCA+CGG | + | chr3_2:81171579-81171598 | Msa0429700:CDS | 20.0% |
!! | AATTTAAACAATATTGTCAC+GGG | + | chr3_2:81171580-81171599 | Msa0429700:CDS | 20.0% |
!! | GATGACAAACAAAATAAAAT+TGG | + | chr3_2:81172216-81172235 | Msa0429700:CDS | 20.0% |
!! | CTAAGAAAAATCTAGAAAAA+AGG | + | chr3_2:81172922-81172941 | Msa0429700:CDS | 20.0% |
!! | TAATCGATATTAAAACTTAC+CGG | - | chr3_2:81172972-81172991 | None:intergenic | 20.0% |
!! | GATAAGAATAAGAAAATGAT+AGG | - | chr3_2:81173388-81173407 | None:intergenic | 20.0% |
!! | ACATAAATAGAAAGAATGTA+AGG | - | chr3_2:81174119-81174138 | None:intergenic | 20.0% |
!! | CAAACATTATAAATATTCAG+TGG | - | chr3_2:81174448-81174467 | None:intergenic | 20.0% |
!! | TTTATAATGTTTGTTTATGC+AGG | + | chr3_2:81174455-81174474 | Msa0429700:intron | 20.0% |
!! | GTATCTATCAATGTTAAAAA+AGG | + | chr3_2:81174477-81174496 | Msa0429700:CDS | 20.0% |
!! | TTCATTCACTCAATTATAAA+AGG | - | chr3_2:81174873-81174892 | None:intergenic | 20.0% |
!!! | GCATATGTATTCATTTTAAA+GGG | - | chr3_2:81175169-81175188 | None:intergenic | 20.0% |
!!! | AGCATATGTATTCATTTTAA+AGG | - | chr3_2:81175170-81175189 | None:intergenic | 20.0% |
!! | AATATCATTATGTTTAGTGT+TGG | - | chr3_2:81175428-81175447 | None:intergenic | 20.0% |
!! | AGAGTAGATTATTTGAAAAT+AGG | + | chr3_2:81175455-81175474 | Msa0429700:CDS | 20.0% |
!! | GAGTAGATTATTTGAAAATA+GGG | + | chr3_2:81175456-81175475 | Msa0429700:CDS | 20.0% |
!! | TTTAACCATAAAAAATGACT+TGG | - | chr3_2:81176210-81176229 | None:intergenic | 20.0% |
!!! | TATATTTATGTTGATTTTGC+AGG | + | chr3_2:81176266-81176285 | Msa0429700:intron | 20.0% |
!!! | ATATTTATGTTGATTTTGCA+GGG | + | chr3_2:81176267-81176286 | Msa0429700:intron | 20.0% |
!! | CAAGCTTATCATTTAATAAA+TGG | + | chr3_2:81176402-81176421 | Msa0429700:three_prime_UTR | 20.0% |
! | AAAACTGATGAAGAATTTCT+TGG | - | chr3_2:81170234-81170253 | None:intergenic | 25.0% |
! | AATTCATCAAAACATCTCTT+TGG | - | chr3_2:81170270-81170289 | None:intergenic | 25.0% |
!!! | AGATTTTTTTCCTACTACAA+TGG | + | chr3_2:81171096-81171115 | Msa0429700:CDS | 25.0% |
!!! | GATTTTTTTCCTACTACAAT+GGG | + | chr3_2:81171097-81171116 | Msa0429700:CDS | 25.0% |
! | TAAAACTTGAATCTTCAGAT+TGG | - | chr3_2:81171132-81171151 | None:intergenic | 25.0% |
!! | ATCCATCATTTTCTGTATTT+TGG | - | chr3_2:81171299-81171318 | None:intergenic | 25.0% |
! | TTATTCCATTGATCAAAACT+TGG | - | chr3_2:81171352-81171371 | None:intergenic | 25.0% |
!!! | AGTTTTGATCAATGGAATAA+TGG | + | chr3_2:81171352-81171371 | Msa0429700:CDS | 25.0% |
!!! | GTTTTGATCAATGGAATAAT+GGG | + | chr3_2:81171353-81171372 | Msa0429700:CDS | 25.0% |
!! | AAATCCAATTTTTCATTCTG+CGG | + | chr3_2:81171474-81171493 | Msa0429700:CDS | 25.0% |
! | AAATGTATCAACCATTACAT+TGG | - | chr3_2:81171518-81171537 | None:intergenic | 25.0% |
!! | AATGTAATGGTTGATACATT+TGG | + | chr3_2:81171517-81171536 | Msa0429700:CDS | 25.0% |
! | CATCAATTGTAATAAGTTCT+GGG | - | chr3_2:81171981-81172000 | None:intergenic | 25.0% |
! | AAATCAATGGAAATTGACAT+TGG | + | chr3_2:81172138-81172157 | Msa0429700:CDS | 25.0% |
! | AATCAATGGAAATTGACATT+GGG | + | chr3_2:81172139-81172158 | Msa0429700:CDS | 25.0% |
! | ACATATTAATAGTCTCAGAA+AGG | + | chr3_2:81172377-81172396 | Msa0429700:CDS | 25.0% |
!! | ATGGTTCTTCTTTTAATCTT+TGG | + | chr3_2:81172529-81172548 | Msa0429700:intron | 25.0% |
! | TTTCTGTAGAAAAGAAGAAT+TGG | + | chr3_2:81172821-81172840 | Msa0429700:CDS | 25.0% |
! | AATGCAATAAATGCAAAAGA+TGG | + | chr3_2:81173066-81173085 | Msa0429700:CDS | 25.0% |
!! | CATTTTCAATTTCTTTTGAG+CGG | - | chr3_2:81173166-81173185 | None:intergenic | 25.0% |
!! | TACAATTTTGCAGTAATTCA+TGG | - | chr3_2:81173567-81173586 | None:intergenic | 25.0% |
! | ATGAATTACTGCAAAATTGT+AGG | + | chr3_2:81173566-81173585 | Msa0429700:intron | 25.0% |
!! | AGATTTAATAGAAGTTTGCT+TGG | + | chr3_2:81173829-81173848 | Msa0429700:intron | 25.0% |
! | AGAAAAATACCAATATCTCA+TGG | - | chr3_2:81174049-81174068 | None:intergenic | 25.0% |
!!! | GCTCATTTTATTAGTTCTAT+TGG | - | chr3_2:81174089-81174108 | None:intergenic | 25.0% |
! | TTTCTTTCTTATCATCAGAT+TGG | + | chr3_2:81174149-81174168 | Msa0429700:intron | 25.0% |
! | AAAACAAAGGAGATAAAAGT+AGG | - | chr3_2:81174406-81174425 | None:intergenic | 25.0% |
! | CATTATAAATATTCAGTGGT+TGG | - | chr3_2:81174444-81174463 | None:intergenic | 25.0% |
! | ACTGAAGAAAATATTGTTGT+TGG | + | chr3_2:81174502-81174521 | Msa0429700:CDS | 25.0% |
! | AAAGAAATGATCATATACGT+TGG | - | chr3_2:81174533-81174552 | None:intergenic | 25.0% |
! | TAAATGTACAACACTACAAA+TGG | - | chr3_2:81174821-81174840 | None:intergenic | 25.0% |
!!! | TATGTATTCATTTTAAAGGG+AGG | - | chr3_2:81175166-81175185 | None:intergenic | 25.0% |
! | TATTCAGTGCACAATAATTA+AGG | + | chr3_2:81175203-81175222 | Msa0429700:intron | 25.0% |
!!! | ATATGAAAAACTTCTGGTTT+AGG | - | chr3_2:81175329-81175348 | None:intergenic | 25.0% |
! | AGAATCATATGAAAAACTTC+TGG | - | chr3_2:81175335-81175354 | None:intergenic | 25.0% |
! | TTTCAAATAATCTACTCTCA+AGG | - | chr3_2:81175453-81175472 | None:intergenic | 25.0% |
! | GTAATGAAAACAACAAATCT+GGG | - | chr3_2:81175826-81175845 | None:intergenic | 25.0% |
! | AGTAATGAAAACAACAAATC+TGG | - | chr3_2:81175827-81175846 | None:intergenic | 25.0% |
GATGAATTAAGCAATCAAGT+AGG | + | chr3_2:81170282-81170301 | Msa0429700:CDS | 30.0% | |
AAATGGTATACAACCGTAAT+TGG | + | chr3_2:81170334-81170353 | Msa0429700:CDS | 30.0% | |
CTTGCATTTGATACTCTTAT+TGG | - | chr3_2:81170606-81170625 | None:intergenic | 30.0% | |
! | TGTTTTTCTACAAATTTGGC+AGG | + | chr3_2:81170651-81170670 | Msa0429700:intron | 30.0% |
TAACCAGTATTATAGGACTT+AGG | - | chr3_2:81170733-81170752 | None:intergenic | 30.0% | |
! | TCCTATAATACTGGTTACTA+TGG | + | chr3_2:81170736-81170755 | Msa0429700:CDS | 30.0% |
! | TGTAACTTACCTGTTTCTTA+TGG | + | chr3_2:81170862-81170881 | Msa0429700:CDS | 30.0% |
TTGTGATTTCTCCTCAATTT+CGG | + | chr3_2:81170969-81170988 | Msa0429700:intron | 30.0% | |
ATTAACAACATGTCTAACAG+TGG | - | chr3_2:81171236-81171255 | None:intergenic | 30.0% | |
TGGATTCAGTATTATCAGAA+GGG | - | chr3_2:81171264-81171283 | None:intergenic | 30.0% | |
ATGGATTCAGTATTATCAGA+AGG | - | chr3_2:81171265-81171284 | None:intergenic | 30.0% | |
!!! | ATCATTTTCTGTATTTTGGC+AGG | - | chr3_2:81171295-81171314 | None:intergenic | 30.0% |
TGCCAAAATACAGAAAATGA+TGG | + | chr3_2:81171294-81171313 | Msa0429700:CDS | 30.0% | |
!! | ATACAGAAAATGATGGATTC+AGG | + | chr3_2:81171301-81171320 | Msa0429700:CDS | 30.0% |
!!! | AAAATGATGGATTCAGGTTT+TGG | + | chr3_2:81171307-81171326 | Msa0429700:CDS | 30.0% |
! | AATTCTGAATGTTGCACTTT+TGG | - | chr3_2:81171409-81171428 | None:intergenic | 30.0% |
! | AATCCAATTTTTCATTCTGC+GGG | + | chr3_2:81171475-81171494 | Msa0429700:CDS | 30.0% |
TTGATCAAATGTTAGCTCAT+CGG | - | chr3_2:81171773-81171792 | None:intergenic | 30.0% | |
CCATCAATTGTAATAAGTTC+TGG | - | chr3_2:81171982-81172001 | None:intergenic | 30.0% | |
CCAGAACTTATTACAATTGA+TGG | + | chr3_2:81171979-81171998 | Msa0429700:CDS | 30.0% | |
! | TTCTTCTCTTGATCAACTTT+TGG | - | chr3_2:81172084-81172103 | None:intergenic | 30.0% |
TAAAATTGGATTCAACCAAG+AGG | + | chr3_2:81172230-81172249 | Msa0429700:CDS | 30.0% | |
AAAATTGGATTCAACCAAGA+GGG | + | chr3_2:81172231-81172250 | Msa0429700:CDS | 30.0% | |
ATGTGTGAACAAATCAATCA+AGG | - | chr3_2:81172343-81172362 | None:intergenic | 30.0% | |
ACCAAATAGCTTAACTTTCT+GGG | - | chr3_2:81172497-81172516 | None:intergenic | 30.0% | |
AACCAAATAGCTTAACTTTC+TGG | - | chr3_2:81172498-81172517 | None:intergenic | 30.0% | |
ATTTGGTTAAAGCTCATGAA+TGG | + | chr3_2:81172510-81172529 | Msa0429700:intron | 30.0% | |
TTTAACACAGATTACTTCTG+AGG | + | chr3_2:81172686-81172705 | Msa0429700:intron | 30.0% | |
!! | GCTTTTTCCTTTCACATAAT+TGG | - | chr3_2:81172740-81172759 | None:intergenic | 30.0% |
AAAAGAAGAATTGGATGTAC+AGG | + | chr3_2:81172830-81172849 | Msa0429700:CDS | 30.0% | |
AAAGAAGAATTGGATGTACA+GGG | + | chr3_2:81172831-81172850 | Msa0429700:CDS | 30.0% | |
! | TTTAGAAGTCTTGTAACACA+TGG | - | chr3_2:81172868-81172887 | None:intergenic | 30.0% |
ATGTGTTACAAGACTTCTAA+AGG | + | chr3_2:81172867-81172886 | Msa0429700:CDS | 30.0% | |
CGATTACTTTATAATTCAGC+TGG | + | chr3_2:81172986-81173005 | Msa0429700:intron | 30.0% | |
CGCTCAAAAGAAATTGAAAA+TGG | + | chr3_2:81173164-81173183 | Msa0429700:CDS | 30.0% | |
!!! | CAAGAAGTCTTTTTTCTAAG+TGG | - | chr3_2:81173259-81173278 | None:intergenic | 30.0% |
! | CTATTTTCAGTTTACATGCT+AGG | - | chr3_2:81173410-81173429 | None:intergenic | 30.0% |
ATCTATAAGAGAATTCAGCA+GGG | - | chr3_2:81173692-81173711 | None:intergenic | 30.0% | |
! | TTTAGTTCAGAAGAAGCAAT+AGG | - | chr3_2:81173767-81173786 | None:intergenic | 30.0% |
GATGTCTATTCTAATATGTC+TGG | + | chr3_2:81173795-81173814 | Msa0429700:intron | 30.0% | |
! | AGTATTTTATGCCTGAAAGA+AGG | + | chr3_2:81173988-81174007 | Msa0429700:CDS | 30.0% |
AGACTATGAAAAGATGTTGA+AGG | + | chr3_2:81174672-81174691 | Msa0429700:CDS | 30.0% | |
!! | ATGGTCTTTAAAGCTCTATT+TGG | - | chr3_2:81174706-81174725 | None:intergenic | 30.0% |
!! | AAATAGAGCTTTAAAGACCA+TGG | + | chr3_2:81174705-81174724 | Msa0429700:CDS | 30.0% |
!! | AATAGAGCTTTAAAGACCAT+GGG | + | chr3_2:81174706-81174725 | Msa0429700:CDS | 30.0% |
!! | ATTAGGTTGGCCAAAATATA+TGG | + | chr3_2:81174979-81174998 | Msa0429700:intron | 30.0% |
! | GCACAATAATTAAGGCTTTT+TGG | + | chr3_2:81175211-81175230 | Msa0429700:intron | 30.0% |
! | TCATTATGTTTAGTGTTGGA+GGG | - | chr3_2:81175424-81175443 | None:intergenic | 30.0% |
! | ATCATTATGTTTAGTGTTGG+AGG | - | chr3_2:81175425-81175444 | None:intergenic | 30.0% |
TGATTCCCAGATTGATATAT+CGG | - | chr3_2:81175769-81175788 | None:intergenic | 30.0% | |
! | TCTTGATTTGAGAACAGTTT+GGG | - | chr3_2:81175970-81175989 | None:intergenic | 30.0% |
! | TTCTTGATTTGAGAACAGTT+TGG | - | chr3_2:81175971-81175990 | None:intergenic | 30.0% |
CAAAATCTCTCAAATTCTCT+AGG | - | chr3_2:81176153-81176172 | None:intergenic | 30.0% | |
! | CTAGAGAATTTGAGAGATTT+TGG | + | chr3_2:81176151-81176170 | Msa0429700:intron | 30.0% |
!! | TACTTTCTGACTTGTTCTTT+GGG | + | chr3_2:81176180-81176199 | Msa0429700:intron | 30.0% |
!!! | GACTACCAAGTCATTTTTTA+TGG | + | chr3_2:81176202-81176221 | Msa0429700:intron | 30.0% |
CACAAAGATTCATTGATCAA+CGG | - | chr3_2:81176349-81176368 | None:intergenic | 30.0% | |
TCATCAAAACATCTCTTTGG+CGG | - | chr3_2:81170267-81170286 | None:intergenic | 35.0% | |
TTACGGTTGTATACCATTTC+AGG | - | chr3_2:81170333-81170352 | None:intergenic | 35.0% | |
ATCATTCAGAATGAGCAACT+TGG | + | chr3_2:81170478-81170497 | Msa0429700:CDS | 35.0% | |
TCATTCAGAATGAGCAACTT+GGG | + | chr3_2:81170479-81170498 | Msa0429700:CDS | 35.0% | |
! | TTTTCTACAAATTTGGCAGG+AGG | + | chr3_2:81170654-81170673 | Msa0429700:intron | 35.0% |
GTTCCTAAGTCCTATAATAC+TGG | + | chr3_2:81170727-81170746 | Msa0429700:CDS | 35.0% | |
GCCATAGTAACCAGTATTAT+AGG | - | chr3_2:81170740-81170759 | None:intergenic | 35.0% | |
! | AACTTACCTGTTTCTTATGG+TGG | + | chr3_2:81170865-81170884 | Msa0429700:CDS | 35.0% |
GTTGCTAATTGATCTGATGT+TGG | - | chr3_2:81170905-81170924 | None:intergenic | 35.0% | |
ACATACAGTTATTTGCGTGT+TGG | - | chr3_2:81170939-81170958 | None:intergenic | 35.0% | |
CAAAGAAAGATCCGAAATTG+AGG | - | chr3_2:81170983-81171002 | None:intergenic | 35.0% | |
ACTTGAATCTTCAGATTGGA+GGG | - | chr3_2:81171128-81171147 | None:intergenic | 35.0% | |
AACTTGAATCTTCAGATTGG+AGG | - | chr3_2:81171129-81171148 | None:intergenic | 35.0% | |
! | TTCTGAAAATCCAACTTCTG+TGG | - | chr3_2:81171208-81171227 | None:intergenic | 35.0% |
!! | ACCATCCAAGTTTTGATCAA+TGG | + | chr3_2:81171344-81171363 | Msa0429700:CDS | 35.0% |
TCCATTGATCAAAACTTGGA+TGG | - | chr3_2:81171348-81171367 | None:intergenic | 35.0% | |
! | TGATCAATGGAATAATGGGA+TGG | + | chr3_2:81171357-81171376 | Msa0429700:CDS | 35.0% |
GGATGTGGTTGAAAAGAATA+AGG | - | chr3_2:81171388-81171407 | None:intergenic | 35.0% | |
TCTCCATTATGAGAGTAATG+TGG | + | chr3_2:81171441-81171460 | Msa0429700:CDS | 35.0% | |
GTTCCACATTACTCTCATAA+TGG | - | chr3_2:81171447-81171466 | None:intergenic | 35.0% | |
ATGGATCCTATTCCTACTAA+TGG | + | chr3_2:81171631-81171650 | Msa0429700:CDS | 35.0% | |
TGTATATCCTCTCCATTAGT+AGG | - | chr3_2:81171646-81171665 | None:intergenic | 35.0% | |
ACTAATGGAGAGGATATACA+AGG | + | chr3_2:81171646-81171665 | Msa0429700:CDS | 35.0% | |
GTCTATCATGCCATAGATTA+GGG | - | chr3_2:81171929-81171948 | None:intergenic | 35.0% | |
AGTCTATCATGCCATAGATT+AGG | - | chr3_2:81171930-81171949 | None:intergenic | 35.0% | |
AAATTGGATTCAACCAAGAG+GGG | + | chr3_2:81172232-81172251 | Msa0429700:CDS | 35.0% | |
TTTGTTTGCTTCTCTTGATC+AGG | - | chr3_2:81172291-81172310 | None:intergenic | 35.0% | |
TAATTGAAAACACTGGAAGG+TGG | - | chr3_2:81172423-81172442 | None:intergenic | 35.0% | |
ATCACGGTAATTGAAAACAC+TGG | - | chr3_2:81172430-81172449 | None:intergenic | 35.0% | |
TCAATTACCGTGATCTGTTT+AGG | + | chr3_2:81172436-81172455 | Msa0429700:intron | 35.0% | |
AGCAATACCTAAACAGATCA+CGG | - | chr3_2:81172446-81172465 | None:intergenic | 35.0% | |
TCCCAGAAAGTTAAGCTATT+TGG | + | chr3_2:81172493-81172512 | Msa0429700:intron | 35.0% | |
ACACATGCCAATTATGTGAA+AGG | + | chr3_2:81172730-81172749 | Msa0429700:CDS | 35.0% | |
CATGAACAAACAATTGGTAC+TGG | - | chr3_2:81172774-81172793 | None:intergenic | 35.0% | |
CCACAACATGAACAAACAAT+TGG | - | chr3_2:81172780-81172799 | None:intergenic | 35.0% | |
CCAATTGTTTGTTCATGTTG+TGG | + | chr3_2:81172777-81172796 | Msa0429700:CDS | 35.0% | |
! | TGTTACAAGACTTCTAAAGG+TGG | + | chr3_2:81172870-81172889 | Msa0429700:CDS | 35.0% |
! | GTTACAAGACTTCTAAAGGT+GGG | + | chr3_2:81172871-81172890 | Msa0429700:CDS | 35.0% |
GTGGGAAAATCACATTCAAT+GGG | + | chr3_2:81172889-81172908 | Msa0429700:CDS | 35.0% | |
TTCTTCAAGTACTTCATCGT+TGG | - | chr3_2:81172949-81172968 | None:intergenic | 35.0% | |
CTACAACAACAGAAGAGATT+TGG | + | chr3_2:81173109-81173128 | Msa0429700:CDS | 35.0% | |
! | TTACTGAAGGCTGCTAATTT+TGG | + | chr3_2:81173200-81173219 | Msa0429700:CDS | 35.0% |
CAAAGTGGGAAAATGTTGAA+GGG | + | chr3_2:81173300-81173319 | Msa0429700:CDS | 35.0% | |
GAAGTTTATGTGCATACATG+CGG | - | chr3_2:81173359-81173378 | None:intergenic | 35.0% | |
TTGTAGGTTATAGCTGCAAA+AGG | + | chr3_2:81173582-81173601 | Msa0429700:intron | 35.0% | |
GAAAGTGAATAAGCAGTTTC+TGG | + | chr3_2:81173644-81173663 | Msa0429700:CDS | 35.0% | |
GATCTATAAGAGAATTCAGC+AGG | - | chr3_2:81173693-81173712 | None:intergenic | 35.0% | |
TAGATCAAGAGTAAGTTCAG+TGG | + | chr3_2:81173707-81173726 | Msa0429700:intron | 35.0% | |
AAGAAGCAATAGGTGGTAAT+TGG | - | chr3_2:81173757-81173776 | None:intergenic | 35.0% | |
! | ATAGAAGTTTGCTTGGTTTC+AGG | + | chr3_2:81173836-81173855 | Msa0429700:intron | 35.0% |
! | GGAGCAGATATATGCATTTT+TGG | + | chr3_2:81173885-81173904 | Msa0429700:CDS | 35.0% |
!!! | CATTTTTGGAATGTATGTCC+AGG | + | chr3_2:81173899-81173918 | Msa0429700:CDS | 35.0% |
! | ATGTATACACAACGCTGATT+CGG | - | chr3_2:81173948-81173967 | None:intergenic | 35.0% |
CAATATCTCATGGTAAACGA+AGG | - | chr3_2:81174039-81174058 | None:intergenic | 35.0% | |
CTTCGTTTACCATGAGATAT+TGG | + | chr3_2:81174037-81174056 | Msa0429700:CDS | 35.0% | |
!! | TTTCCTGACTTGCTACATAT+GGG | + | chr3_2:81174199-81174218 | Msa0429700:CDS | 35.0% |
! | TAATCATCCCCTTTTCTTGA+AGG | - | chr3_2:81174233-81174252 | None:intergenic | 35.0% |
! | TTTTATGTGTCTGTGTGTGT+TGG | + | chr3_2:81174328-81174347 | Msa0429700:intron | 35.0% |
!!! | GGGCTAGTTTTTGAAAACAA+AGG | - | chr3_2:81174419-81174438 | None:intergenic | 35.0% |
TAAATATTCAGTGGTTGGCA+GGG | - | chr3_2:81174439-81174458 | None:intergenic | 35.0% | |
ATAAATATTCAGTGGTTGGC+AGG | - | chr3_2:81174440-81174459 | None:intergenic | 35.0% | |
!!! | ACACTCTTTTTCAATGGTCT+TGG | - | chr3_2:81174647-81174666 | None:intergenic | 35.0% |
AAGACCATTGAAAAAGAGTG+TGG | + | chr3_2:81174646-81174665 | Msa0429700:CDS | 35.0% | |
TCGCATCACTAAAATGTCTT+TGG | - | chr3_2:81174758-81174777 | None:intergenic | 35.0% | |
CACTACAAATGGAAAAAACG+TGG | - | chr3_2:81174810-81174829 | None:intergenic | 35.0% | |
ATTGGGGGGAATAAAAGAAA+AGG | - | chr3_2:81174955-81174974 | None:intergenic | 35.0% | |
TATTCCCCCCAATTTCTATT+AGG | + | chr3_2:81174962-81174981 | Msa0429700:intron | 35.0% | |
TGGCCAACCTAATAGAAATT+GGG | - | chr3_2:81174972-81174991 | None:intergenic | 35.0% | |
TTGGCCAACCTAATAGAAAT+TGG | - | chr3_2:81174973-81174992 | None:intergenic | 35.0% | |
CATATTGCAAGTGAGCTATA+AGG | - | chr3_2:81175022-81175041 | None:intergenic | 35.0% | |
! | TTGAACTGTGTTCCATTTTC+AGG | + | chr3_2:81175381-81175400 | Msa0429700:intron | 35.0% |
! | CATTATGTTTAGTGTTGGAG+GGG | - | chr3_2:81175423-81175442 | None:intergenic | 35.0% |
TTTACAACAGTCATCAGAGT+AGG | - | chr3_2:81175580-81175599 | None:intergenic | 35.0% | |
ACAATGTATTCCAAAAGAGC+TGG | + | chr3_2:81175623-81175642 | Msa0429700:CDS | 35.0% | |
TTTGAGTCAACTTGTGTTCA+TGG | - | chr3_2:81175714-81175733 | None:intergenic | 35.0% | |
TCAAGACCGATATATCAATC+TGG | + | chr3_2:81175760-81175779 | Msa0429700:CDS | 35.0% | |
CAAGACCGATATATCAATCT+GGG | + | chr3_2:81175761-81175780 | Msa0429700:CDS | 35.0% | |
GATATATCAATCTGGGAATC+AGG | + | chr3_2:81175768-81175787 | Msa0429700:CDS | 35.0% | |
TCAGGAGTCAAATGAGAAAA+TGG | + | chr3_2:81175786-81175805 | Msa0429700:CDS | 35.0% | |
! | ACCATATCTTTTTACACTGC+TGG | - | chr3_2:81176042-81176061 | None:intergenic | 35.0% |
!! | CTACTTTCTGACTTGTTCTT+TGG | + | chr3_2:81176179-81176198 | Msa0429700:intron | 35.0% |
GAGTTCACAGTTCAAATAGT+TGG | + | chr3_2:81176375-81176394 | Msa0429700:three_prime_UTR | 35.0% | |
! | TTTGCCAAGGGTTTTCATCT+TGG | + | chr3_2:81170186-81170205 | Msa0429700:CDS | 40.0% |
! | ACTTACCAATGCTGCTTCAA+AGG | + | chr3_2:81170522-81170541 | Msa0429700:CDS | 40.0% |
!! | ACAAACCTTTGAAGCAGCAT+TGG | - | chr3_2:81170530-81170549 | None:intergenic | 40.0% |
GTACTTTAATGCTCAGACAC+AGG | - | chr3_2:81170560-81170579 | None:intergenic | 40.0% | |
TTGCTTCCACCATAAGAAAC+AGG | - | chr3_2:81170874-81170893 | None:intergenic | 40.0% | |
! | TTCTTATGGTGGAAGCAATC+TGG | + | chr3_2:81170876-81170895 | Msa0429700:CDS | 40.0% |
GCAATATCAACCACAGAAGT+TGG | + | chr3_2:81171195-81171214 | Msa0429700:CDS | 40.0% | |
!!! | TATTTTGGCAGGTCGTAGTA+TGG | - | chr3_2:81171284-81171303 | None:intergenic | 40.0% |
! | GAATGTTGCACTTTTGGATG+TGG | - | chr3_2:81171403-81171422 | None:intergenic | 40.0% |
! | TCATAATGGAGAGAAGAGAG+GGG | - | chr3_2:81171433-81171452 | None:intergenic | 40.0% |
! | CTCATAATGGAGAGAAGAGA+GGG | - | chr3_2:81171434-81171453 | None:intergenic | 40.0% |
! | TCTCATAATGGAGAGAAGAG+AGG | - | chr3_2:81171435-81171454 | None:intergenic | 40.0% |
ACTCCCGCAGAATGAAAAAT+TGG | - | chr3_2:81171481-81171500 | None:intergenic | 40.0% | |
! | TTTTCATTCTGCGGGAGTTA+AGG | + | chr3_2:81171483-81171502 | Msa0429700:CDS | 40.0% |
TTTCATTCTGCGGGAGTTAA+GGG | + | chr3_2:81171484-81171503 | Msa0429700:CDS | 40.0% | |
GGGGATAAACACCAATGTAA+TGG | + | chr3_2:81171504-81171523 | Msa0429700:CDS | 40.0% | |
TTGATACATTTGGACAGCCA+GGG | + | chr3_2:81171527-81171546 | Msa0429700:CDS | 40.0% | |
GCTTGAAAGCTATGATGTGA+TGG | + | chr3_2:81171549-81171568 | Msa0429700:CDS | 40.0% | |
TTGTCACGGGTATAAAATCC+AGG | + | chr3_2:81171593-81171612 | Msa0429700:CDS | 40.0% | |
TCCTATTCCTACTAATGGAG+AGG | + | chr3_2:81171636-81171655 | Msa0429700:CDS | 40.0% | |
TCCTCTCCATTAGTAGGAAT+AGG | - | chr3_2:81171640-81171659 | None:intergenic | 40.0% | |
GGCAGAACTAAATTTGACCA+CGG | + | chr3_2:81171667-81171686 | Msa0429700:CDS | 40.0% | |
TGGAATTTAATCTGATGCCG+TGG | - | chr3_2:81171687-81171706 | None:intergenic | 40.0% | |
!!! | TAGCTCATCGGCTTTCTTTT+TGG | - | chr3_2:81171761-81171780 | None:intergenic | 40.0% |
TCCTCAGTTACAACTGTTAG+TGG | + | chr3_2:81171808-81171827 | Msa0429700:CDS | 40.0% | |
CCTCAGTTACAACTGTTAGT+GGG | + | chr3_2:81171809-81171828 | Msa0429700:CDS | 40.0% | |
ATGCCATAGATTAGGGAATC+TGG | - | chr3_2:81171922-81171941 | None:intergenic | 40.0% | |
GATCAACTTCCACTGAGTTT+CGG | - | chr3_2:81171954-81171973 | None:intergenic | 40.0% | |
! | TGATGGTGATGATGATGAAG+AGG | + | chr3_2:81171996-81172015 | Msa0429700:CDS | 40.0% |
GATGATGAAGAGGACATACA+AGG | + | chr3_2:81172006-81172025 | Msa0429700:CDS | 40.0% | |
GAGGACATACAAGGAAGAAT+TGG | + | chr3_2:81172015-81172034 | Msa0429700:CDS | 40.0% | |
AAGAATTGGATTCAACCACG+AGG | + | chr3_2:81172029-81172048 | Msa0429700:CDS | 40.0% | |
AGAATTGGATTCAACCACGA+GGG | + | chr3_2:81172030-81172049 | Msa0429700:CDS | 40.0% | |
GACAGACAGTTGCAAATCAA+TGG | + | chr3_2:81172125-81172144 | Msa0429700:CDS | 40.0% | |
TTGATCAGGTGTTAGTTCAC+TGG | - | chr3_2:81172277-81172296 | None:intergenic | 40.0% | |
TCTCAGAAAGGAATCTGTTC+TGG | + | chr3_2:81172389-81172408 | Msa0429700:CDS | 40.0% | |
CGGTAATTGAAAACACTGGA+AGG | - | chr3_2:81172426-81172445 | None:intergenic | 40.0% | |
!! | GCTTAACTTTCTGGGATAGT+TGG | - | chr3_2:81172489-81172508 | None:intergenic | 40.0% |
! | AACACAGATTACTTCTGAGG+AGG | + | chr3_2:81172689-81172708 | Msa0429700:intron | 40.0% |
GGTGGGAAAATCACATTCAA+TGG | + | chr3_2:81172888-81172907 | Msa0429700:CDS | 40.0% | |
! | CGATGAAGTACTTGAAGAAC+CGG | + | chr3_2:81172950-81172969 | Msa0429700:CDS | 40.0% |
ACACAACAGTCGTAAAGAGT+TGG | - | chr3_2:81173031-81173050 | None:intergenic | 40.0% | |
GACTGTTGTGTTCTTCTAGT+GGG | + | chr3_2:81173040-81173059 | Msa0429700:intron | 40.0% | |
! | ATTTCTTTTGAGCGGCATAC+AGG | - | chr3_2:81173158-81173177 | None:intergenic | 40.0% |
AAAGCATGCTCACTTACTGA+AGG | + | chr3_2:81173187-81173206 | Msa0429700:CDS | 40.0% | |
TTCTAAGTGGTCACTTAGCA+CGG | - | chr3_2:81173246-81173265 | None:intergenic | 40.0% | |
GCAAAGTGGGAAAATGTTGA+AGG | + | chr3_2:81173299-81173318 | Msa0429700:CDS | 40.0% | |
AGGGAACGAGAATCTTGATA+AGG | + | chr3_2:81173319-81173338 | Msa0429700:CDS | 40.0% | |
! | GTTTCTGGATATCATTCCAG+AGG | + | chr3_2:81173659-81173678 | Msa0429700:CDS | 40.0% |
AGTTCAGAAGAAGCAATAGG+TGG | - | chr3_2:81173764-81173783 | None:intergenic | 40.0% | |
CTTCTGTTTCAGCAGATTGA+AGG | + | chr3_2:81173864-81173883 | Msa0429700:CDS | 40.0% | |
! | ATGGTAAACGAAGGTACGAA+GGG | - | chr3_2:81174030-81174049 | None:intergenic | 40.0% |
!! | GTTTCCTGACTTGCTACATA+TGG | + | chr3_2:81174198-81174217 | Msa0429700:CDS | 40.0% |
! | TTCGGAGTCTTTTGCTCTTT+GGG | - | chr3_2:81174272-81174291 | None:intergenic | 40.0% |
AAGAGAAAGAAACTGACCAC+CGG | - | chr3_2:81174310-81174329 | None:intergenic | 40.0% | |
TTCTTTGTTGCTGCTGAGAA+AGG | + | chr3_2:81174547-81174566 | Msa0429700:CDS | 40.0% | |
TCTTTGTTGCTGCTGAGAAA+GGG | + | chr3_2:81174548-81174567 | Msa0429700:CDS | 40.0% | |
TCTCGTTTGCCATACTTTGA+TGG | + | chr3_2:81174589-81174608 | Msa0429700:CDS | 40.0% | |
! | ACCATTGAAAAAGAGTGTGG+AGG | + | chr3_2:81174649-81174668 | Msa0429700:CDS | 40.0% |
!!! | TCCTCCACACTCTTTTTCAA+TGG | - | chr3_2:81174653-81174672 | None:intergenic | 40.0% |
AATGTCTTTGGCAGTGTCTT+TGG | - | chr3_2:81174746-81174765 | None:intergenic | 40.0% | |
ACGTGGATGAAAGTAAGACA+AGG | - | chr3_2:81174793-81174812 | None:intergenic | 40.0% | |
CCAACCTAATAGAAATTGGG+GGG | - | chr3_2:81174969-81174988 | None:intergenic | 40.0% | |
GCCAACCTAATAGAAATTGG+GGG | - | chr3_2:81174970-81174989 | None:intergenic | 40.0% | |
GGCCAACCTAATAGAAATTG+GGG | - | chr3_2:81174971-81174990 | None:intergenic | 40.0% | |
CCAAAATATATGGCCTACCA+GGG | + | chr3_2:81174989-81175008 | Msa0429700:CDS | 40.0% | |
! | ATAAGGAAGTTTTCCCTGGT+AGG | - | chr3_2:81175005-81175024 | None:intergenic | 40.0% |
! | AGCTATAAGGAAGTTTTCCC+TGG | - | chr3_2:81175009-81175028 | None:intergenic | 40.0% |
!! | ATGGTTTTGCACTGAATGCA+AGG | + | chr3_2:81175082-81175101 | Msa0429700:CDS | 40.0% |
CACTGAATGCAAGGAAATTC+AGG | + | chr3_2:81175091-81175110 | Msa0429700:CDS | 40.0% | |
CAAACTGAAACTGAGACTTC+TGG | - | chr3_2:81175501-81175520 | None:intergenic | 40.0% | |
TAGGATTGTGTAGATGGTAG+AGG | - | chr3_2:81175561-81175580 | None:intergenic | 40.0% | |
TCAGAGTAGGATTGTGTAGA+TGG | - | chr3_2:81175567-81175586 | None:intergenic | 40.0% | |
! | TCTCACATTTCCAGCTCTTT+TGG | - | chr3_2:81175636-81175655 | None:intergenic | 40.0% |
CTTATAGCATGCAGAGCAAA+TGG | - | chr3_2:81175674-81175693 | None:intergenic | 40.0% | |
CATTTGCTCTGCATGCTATA+AGG | + | chr3_2:81175672-81175691 | Msa0429700:CDS | 40.0% | |
TCTGCATGCTATAAGGATAG+AGG | + | chr3_2:81175679-81175698 | Msa0429700:CDS | 40.0% | |
TTCACCATCTGTGTGTAAGT+CGG | - | chr3_2:81175884-81175903 | None:intergenic | 40.0% | |
GCCAGCAGTGTAAAAAGATA+TGG | + | chr3_2:81176038-81176057 | Msa0429700:CDS | 40.0% | |
! | TTATACTTGCTGCTCACTCT+AGG | + | chr3_2:81176062-81176081 | Msa0429700:CDS | 40.0% |
! | CTCTAGGAATTGCAAAGACT+TGG | + | chr3_2:81176078-81176097 | Msa0429700:CDS | 40.0% |
! | CCAAGGGTTTTCATCTTGGT+GGG | + | chr3_2:81170190-81170209 | Msa0429700:CDS | 45.0% |
!! | TTCATCTTGGTGGGAGTACT+TGG | + | chr3_2:81170199-81170218 | Msa0429700:CDS | 45.0% |
AAGTAGGATTCTCCTCAGAC+TGG | + | chr3_2:81170298-81170317 | Msa0429700:CDS | 45.0% | |
AGTAGCAATATTTCCAGCGC+AGG | - | chr3_2:81170505-81170524 | None:intergenic | 45.0% | |
TTAATGCTCAGACACAGGTC+AGG | - | chr3_2:81170555-81170574 | None:intergenic | 45.0% | |
GCAGGAGGAATATATGAACC+TGG | + | chr3_2:81170669-81170688 | Msa0429700:intron | 45.0% | |
GGCAGGTTATGAGCAATAGA+AGG | - | chr3_2:81170787-81170806 | None:intergenic | 45.0% | |
!!! | CATAACCTGCCTTGTTTTCC+TGG | + | chr3_2:81170796-81170815 | Msa0429700:CDS | 45.0% |
GAACCATCACCAGGAAAACA+AGG | - | chr3_2:81170808-81170827 | None:intergenic | 45.0% | |
TATCCCTCCAGTTGCTGATA+TGG | + | chr3_2:81170831-81170850 | Msa0429700:CDS | 45.0% | |
CATCCATATCAGCAACTGGA+GGG | - | chr3_2:81170837-81170856 | None:intergenic | 45.0% | |
ACATCCATATCAGCAACTGG+AGG | - | chr3_2:81170838-81170857 | None:intergenic | 45.0% | |
AGCACATCCATATCAGCAAC+TGG | - | chr3_2:81170841-81170860 | None:intergenic | 45.0% | |
ATCTCCACTGCAAAAAGCAG+AGG | - | chr3_2:81171058-81171077 | None:intergenic | 45.0% | |
!!! | TCTGCTTTTTGCAGTGGAGA+TGG | + | chr3_2:81171057-81171076 | Msa0429700:intron | 45.0% |
AGGGATCTTCCCATTGTAGT+AGG | - | chr3_2:81171109-81171128 | None:intergenic | 45.0% | |
TATGTCCTCTCAATCTGCCT+CGG | + | chr3_2:81171150-81171169 | Msa0429700:CDS | 45.0% | |
ATCTGCCTCGGTGAATACTT+CGG | + | chr3_2:81171162-81171181 | Msa0429700:CDS | 45.0% | |
! | ATCTTCCGAAGTATTCACCG+AGG | - | chr3_2:81171170-81171189 | None:intergenic | 45.0% |
TTCATTCTGCGGGAGTTAAG+GGG | + | chr3_2:81171485-81171504 | Msa0429700:CDS | 45.0% | |
GTTGATACATTTGGACAGCC+AGG | + | chr3_2:81171526-81171545 | Msa0429700:CDS | 45.0% | |
ACATCATAGCTTTCAAGCCC+TGG | - | chr3_2:81171547-81171566 | None:intergenic | 45.0% | |
AGCCTATTCCTACTGCATTC+TGG | + | chr3_2:81171728-81171747 | Msa0429700:CDS | 45.0% | |
GTCCAGAATGCAGTAGGAAT+AGG | - | chr3_2:81171733-81171752 | None:intergenic | 45.0% | |
GCATTTGTCCAGAATGCAGT+AGG | - | chr3_2:81171739-81171758 | None:intergenic | 45.0% | |
CCCACTAACAGTTGTAACTG+AGG | - | chr3_2:81171812-81171831 | None:intergenic | 45.0% | |
CCTTTCGAGGGAATCAGTTT+AGG | - | chr3_2:81171871-81171890 | None:intergenic | 45.0% | |
! | CCTAAACTGATTCCCTCGAA+AGG | + | chr3_2:81171868-81171887 | Msa0429700:CDS | 45.0% |
GAGCCAGATTCCCTAATCTA+TGG | + | chr3_2:81171916-81171935 | Msa0429700:CDS | 45.0% | |
GAATTGGATTCAACCACGAG+GGG | + | chr3_2:81172031-81172050 | Msa0429700:CDS | 45.0% | |
TATGCCTGCTCTCATAAGCA+AGG | + | chr3_2:81172173-81172192 | Msa0429700:CDS | 45.0% | |
! | ATTACTTCTGAGGAGGAAGC+AGG | + | chr3_2:81172696-81172715 | Msa0429700:CDS | 45.0% |
! | TTACTTCTGAGGAGGAAGCA+GGG | + | chr3_2:81172697-81172716 | Msa0429700:CDS | 45.0% |
CGACTGTTGTGTTCTTCTAG+TGG | + | chr3_2:81173039-81173058 | Msa0429700:intron | 45.0% | |
TGTTGTGTTCTTCTAGTGGG+TGG | + | chr3_2:81173043-81173062 | Msa0429700:intron | 45.0% | |
!!! | GGCTGCTAATTTTGGTGCTA+AGG | + | chr3_2:81173208-81173227 | Msa0429700:CDS | 45.0% |
TCATGCAAGAGAGAGCAAAG+TGG | + | chr3_2:81173285-81173304 | Msa0429700:CDS | 45.0% | |
CATGCAAGAGAGAGCAAAGT+GGG | + | chr3_2:81173286-81173305 | Msa0429700:CDS | 45.0% | |
GTGCATACATGCGGATTTCT+CGG | - | chr3_2:81173350-81173369 | None:intergenic | 45.0% | |
GGAATGTATGTCCAGGAGTT+TGG | + | chr3_2:81173906-81173925 | Msa0429700:CDS | 45.0% | |
CCACTCTTTGTCCTTCTTTC+AGG | - | chr3_2:81174002-81174021 | None:intergenic | 45.0% | |
CCTGAAAGAAGGACAAAGAG+TGG | + | chr3_2:81173999-81174018 | Msa0429700:CDS | 45.0% | |
! | CATGGTAAACGAAGGTACGA+AGG | - | chr3_2:81174031-81174050 | None:intergenic | 45.0% |
CCTGTGCTCCTTCAAGAAAA+GGG | + | chr3_2:81174222-81174241 | Msa0429700:CDS | 45.0% | |
CTGTGCTCCTTCAAGAAAAG+GGG | + | chr3_2:81174223-81174242 | Msa0429700:CDS | 45.0% | |
! | TCGGAGTCTTTTGCTCTTTG+GGG | - | chr3_2:81174271-81174290 | None:intergenic | 45.0% |
! | CTTCGGAGTCTTTTGCTCTT+TGG | - | chr3_2:81174273-81174292 | None:intergenic | 45.0% |
CGGCGTAGCTTATCATTCTT+CGG | - | chr3_2:81174290-81174309 | None:intergenic | 45.0% | |
CGAAGAATGATAAGCTACGC+CGG | + | chr3_2:81174288-81174307 | Msa0429700:CDS | 45.0% | |
CTTTGTTGCTGCTGAGAAAG+GGG | + | chr3_2:81174549-81174568 | Msa0429700:CDS | 45.0% | |
CAGCAGTCTCCATCAAAGTA+TGG | - | chr3_2:81174601-81174620 | None:intergenic | 45.0% | |
CATACTTTGATGGAGACTGC+TGG | + | chr3_2:81174599-81174618 | Msa0429700:CDS | 45.0% | |
TCTTTGGCAGTGTCTTTGGA+AGG | - | chr3_2:81174742-81174761 | None:intergenic | 45.0% | |
CCCCCCAATTTCTATTAGGT+TGG | + | chr3_2:81174966-81174985 | Msa0429700:intron | 45.0% | |
GCCAAAATATATGGCCTACC+AGG | + | chr3_2:81174988-81175007 | Msa0429700:CDS | 45.0% | |
! | CCCTGGTAGGCCATATATTT+TGG | - | chr3_2:81174992-81175011 | None:intergenic | 45.0% |
TCCCAGACACTATCACTTCA+CGG | - | chr3_2:81175058-81175077 | None:intergenic | 45.0% | |
! | AGGAAATTCAGGAGTGCGAA+AGG | + | chr3_2:81175102-81175121 | Msa0429700:CDS | 45.0% |
GCAACTCGCCATTCTTTGAA+GGG | - | chr3_2:81175285-81175304 | None:intergenic | 45.0% | |
TGCAACTCGCCATTCTTTGA+AGG | - | chr3_2:81175286-81175305 | None:intergenic | 45.0% | |
CGAGTTGCATACACTTTGTC+AGG | + | chr3_2:81175297-81175316 | Msa0429700:CDS | 45.0% | |
CATCAACAACGGCCTGAAAA+TGG | - | chr3_2:81175396-81175415 | None:intergenic | 45.0% | |
GGAGGGGATATCATCAACAA+CGG | - | chr3_2:81175407-81175426 | None:intergenic | 45.0% | |
TGCCAAGTATTCCTCGATGA+TGG | + | chr3_2:81175534-81175553 | Msa0429700:CDS | 45.0% | |
GACCATCATCGAGGAATACT+TGG | - | chr3_2:81175539-81175558 | None:intergenic | 45.0% | |
AAGGTTCAGCATTAGCTGCA+CGG | - | chr3_2:81175940-81175959 | None:intergenic | 45.0% | |
GGTGCGAAATTCGAGTGAAT+CGG | + | chr3_2:81176011-81176030 | Msa0429700:CDS | 45.0% | |
GTGCGAAATTCGAGTGAATC+GGG | + | chr3_2:81176012-81176031 | Msa0429700:CDS | 45.0% | |
TGCGAAATTCGAGTGAATCG+GGG | + | chr3_2:81176013-81176032 | Msa0429700:CDS | 45.0% | |
ACTTGGAGTGTAGCATTCCA+CGG | + | chr3_2:81176095-81176114 | Msa0429700:CDS | 45.0% | |
!! | TATATATATATATATATGTT+TGG | + | chr3_2:81173516-81173535 | Msa0429700:intron | 5.0% |
! | GCCAAGGGTTTTCATCTTGG+TGG | + | chr3_2:81170189-81170208 | Msa0429700:CDS | 50.0% |
CCCACCAAGATGAAAACCCT+TGG | - | chr3_2:81170193-81170212 | None:intergenic | 50.0% | |
TAGGATTCTCCTCAGACTGG+CGG | + | chr3_2:81170301-81170320 | Msa0429700:CDS | 50.0% | |
CTGGCGGTATCATCCTGAAA+TGG | + | chr3_2:81170317-81170336 | Msa0429700:CDS | 50.0% | |
!! | CACGCTGATTCAATGTCTCC+AGG | - | chr3_2:81170690-81170709 | None:intergenic | 50.0% |
TTACTATGGCGTGCCAGAAG+CGG | + | chr3_2:81170750-81170769 | Msa0429700:CDS | 50.0% | |
GGATGAGATATTCCCGCTTC+TGG | - | chr3_2:81170766-81170785 | None:intergenic | 50.0% | |
CATCACCAGGAAAACAAGGC+AGG | - | chr3_2:81170804-81170823 | None:intergenic | 50.0% | |
!!! | CTGCCTTGTTTTCCTGGTGA+TGG | + | chr3_2:81170802-81170821 | Msa0429700:CDS | 50.0% |
GGGATAGATGAACCATCACC+AGG | - | chr3_2:81170817-81170836 | None:intergenic | 50.0% | |
!!! | TCCTCCTCTGCTTTTTGCAG+TGG | + | chr3_2:81171051-81171070 | Msa0429700:intron | 50.0% |
TCCACTGCAAAAAGCAGAGG+AGG | - | chr3_2:81171055-81171074 | None:intergenic | 50.0% | |
ATTCACCGAGGCAGATTGAG+AGG | - | chr3_2:81171158-81171177 | None:intergenic | 50.0% | |
CATGTCGAGACATTGCATCC+TGG | - | chr3_2:81171614-81171633 | None:intergenic | 50.0% | |
CAGGATGCAATGTCTCGACA+TGG | + | chr3_2:81171612-81171631 | Msa0429700:CDS | 50.0% | |
CTTGGTGAGAGTAGGCATAC+TGG | - | chr3_2:81171707-81171726 | None:intergenic | 50.0% | |
CAGTATGCCTACTCTCACCA+AGG | + | chr3_2:81171705-81171724 | Msa0429700:CDS | 50.0% | |
ATAGGCTCCTTGGTGAGAGT+AGG | - | chr3_2:81171715-81171734 | None:intergenic | 50.0% | |
TGCAGTAGGAATAGGCTCCT+TGG | - | chr3_2:81171725-81171744 | None:intergenic | 50.0% | |
CCAGCTTCTAAGCCTTTCGA+GGG | - | chr3_2:81171883-81171902 | None:intergenic | 50.0% | |
ACCAGCTTCTAAGCCTTTCG+AGG | - | chr3_2:81171884-81171903 | None:intergenic | 50.0% | |
GATAGACTGCCGAAACTCAG+TGG | + | chr3_2:81171942-81171961 | Msa0429700:CDS | 50.0% | |
TGCAACTGTCTGTCACGACA+TGG | - | chr3_2:81172119-81172138 | None:intergenic | 50.0% | |
GCAACCTTGCTTATGAGAGC+AGG | - | chr3_2:81172180-81172199 | None:intergenic | 50.0% | |
CTTTAGCATCTGTCCCCTCT+TGG | - | chr3_2:81172248-81172267 | None:intergenic | 50.0% | |
TGGTCACTTAGCACGGTTCT+TGG | - | chr3_2:81173239-81173258 | None:intergenic | 50.0% | |
TCAGCAGGGTAATTCTCCTC+TGG | - | chr3_2:81173678-81173697 | None:intergenic | 50.0% | |
!! | CAGGAGTTTGGCTCTGAATG+CGG | + | chr3_2:81173918-81173937 | Msa0429700:CDS | 50.0% |
AGGCCCATATGTAGCAAGTC+AGG | - | chr3_2:81174205-81174224 | None:intergenic | 50.0% | |
GCCTGTGCTCCTTCAAGAAA+AGG | + | chr3_2:81174221-81174240 | Msa0429700:CDS | 50.0% | |
!! | CCCTTTTCTTGAAGGAGCAC+AGG | - | chr3_2:81174225-81174244 | None:intergenic | 50.0% |
!! | GAGTCTTTTGCTCTTTGGGG+TGG | - | chr3_2:81174268-81174287 | None:intergenic | 50.0% |
AGAATGATAAGCTACGCCGG+TGG | + | chr3_2:81174291-81174310 | Msa0429700:CDS | 50.0% | |
CAAACGAGAAGCTGTCACCT+TGG | - | chr3_2:81174578-81174597 | None:intergenic | 50.0% | |
TTTGATGGAGACTGCTGGTC+TGG | + | chr3_2:81174604-81174623 | Msa0429700:CDS | 50.0% | |
! | CTGCTGGTCTGGTAATGCTA+TGG | + | chr3_2:81174615-81174634 | Msa0429700:CDS | 50.0% |
! | GGCAGTGTCTTTGGAAGGAT+TGG | - | chr3_2:81174737-81174756 | None:intergenic | 50.0% |
! | TGCCGTGAAGTGATAGTGTC+TGG | + | chr3_2:81175053-81175072 | Msa0429700:CDS | 50.0% |
! | GCCGTGAAGTGATAGTGTCT+GGG | + | chr3_2:81175054-81175073 | Msa0429700:CDS | 50.0% |
! | TGATAGTGTCTGGGAAGCGA+TGG | + | chr3_2:81175063-81175082 | Msa0429700:CDS | 50.0% |
! | AAGGGTGCGCATCAGAACTA+TGG | - | chr3_2:81175267-81175286 | None:intergenic | 50.0% |
GATGCGCACCCTTCAAAGAA+TGG | + | chr3_2:81175274-81175293 | Msa0429700:CDS | 50.0% | |
TCGAGGAATACTTGGCACGA+CGG | - | chr3_2:81175531-81175550 | None:intergenic | 50.0% | |
ATGGTAGAGGACCATCATCG+AGG | - | chr3_2:81175548-81175567 | None:intergenic | 50.0% | |
GCAGAGCAAATGGTACACTC+TGG | - | chr3_2:81175664-81175683 | None:intergenic | 50.0% | |
!! | CTTGCCGACTTACACACAGA+TGG | + | chr3_2:81175877-81175896 | Msa0429700:intron | 50.0% |
GAACAGTTTGGGTGAGAGCA+AGG | - | chr3_2:81175959-81175978 | None:intergenic | 50.0% | |
AGCTGTTCTCTCATGCCAGT+AGG | + | chr3_2:81175990-81176009 | Msa0429700:CDS | 50.0% | |
CACTCGAATTTCGCACCTAC+TGG | - | chr3_2:81176008-81176027 | None:intergenic | 50.0% | |
ATAACAACACACCTGCACCG+TGG | - | chr3_2:81176115-81176134 | None:intergenic | 50.0% | |
AGGATGATACCGCCAGTCTG+AGG | - | chr3_2:81170313-81170332 | None:intergenic | 55.0% | |
TCAGCGTGTGCAAGCTCTAC+TGG | + | chr3_2:81170702-81170721 | Msa0429700:CDS | 55.0% | |
CAGCGTGTGCAAGCTCTACT+GGG | + | chr3_2:81170703-81170722 | Msa0429700:CDS | 55.0% | |
TACTATGGCGTGCCAGAAGC+GGG | + | chr3_2:81170751-81170770 | Msa0429700:CDS | 55.0% | |
CCCTCGAAAGGCTTAGAAGC+TGG | + | chr3_2:81171880-81171899 | Msa0429700:CDS | 55.0% | |
CGCATTCAGAGCCAAACTCC+TGG | - | chr3_2:81173920-81173939 | None:intergenic | 55.0% | |
TGCTGAGAAAGGGGACTCCA+AGG | + | chr3_2:81174558-81174577 | Msa0429700:CDS | 55.0% | |
! | GGAAGGATTGGCATGTCCCA+TGG | - | chr3_2:81174725-81174744 | None:intergenic | 55.0% |
AGTGTAGCATTCCACGGTGC+AGG | + | chr3_2:81176101-81176120 | Msa0429700:CDS | 55.0% | |
CTTTAGCGTCTGTCCCCTCG+TGG | - | chr3_2:81172047-81172066 | None:intergenic | 60.0% | |
TGAGCAACTTGGGCCTGCGC+TGG | + | chr3_2:81170489-81170508 | Msa0429700:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 81170183 | 81176561 | 81170183 | ID=Msa0429700;Name=Msa0429700 |
chr3_2 | mRNA | 81170183 | 81176561 | 81170183 | ID=Msa0429700-mRNA-1;Parent=Msa0429700;Name=Msa0429700-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.85|0.73|1|1|1|15|192|1376 |
chr3_2 | exon | 81170183 | 81170370 | 81170183 | ID=Msa0429700-mRNA-1:exon:22337;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81170471 | 81170543 | 81170471 | ID=Msa0429700-mRNA-1:exon:22338;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81170673 | 81170952 | 81170673 | ID=Msa0429700-mRNA-1:exon:22339;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81171071 | 81172410 | 81171071 | ID=Msa0429700-mRNA-1:exon:22340;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81172696 | 81172971 | 81172696 | ID=Msa0429700-mRNA-1:exon:22341;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81173059 | 81173340 | 81173059 | ID=Msa0429700-mRNA-1:exon:22342;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81173588 | 81173716 | 81173588 | ID=Msa0429700-mRNA-1:exon:22343;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81173858 | 81174058 | 81173858 | ID=Msa0429700-mRNA-1:exon:22344;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81174167 | 81174312 | 81174167 | ID=Msa0429700-mRNA-1:exon:22345;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81174477 | 81174780 | 81174477 | ID=Msa0429700-mRNA-1:exon:22346;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81174984 | 81175123 | 81174984 | ID=Msa0429700-mRNA-1:exon:22347;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81175261 | 81175318 | 81175261 | ID=Msa0429700-mRNA-1:exon:22348;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81175403 | 81175807 | 81175403 | ID=Msa0429700-mRNA-1:exon:22349;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81175896 | 81176122 | 81175896 | ID=Msa0429700-mRNA-1:exon:22350;Parent=Msa0429700-mRNA-1 |
chr3_2 | exon | 81176288 | 81176561 | 81176288 | ID=Msa0429700-mRNA-1:exon:22351;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81170183 | 81170370 | 81170183 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81170471 | 81170543 | 81170471 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81170673 | 81170952 | 81170673 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81171071 | 81172410 | 81171071 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81172696 | 81172971 | 81172696 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81173059 | 81173340 | 81173059 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81173588 | 81173716 | 81173588 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81173858 | 81174058 | 81173858 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81174167 | 81174312 | 81174167 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81174477 | 81174780 | 81174477 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81174984 | 81175123 | 81174984 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81175261 | 81175318 | 81175261 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81175403 | 81175807 | 81175403 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81175896 | 81176122 | 81175896 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | CDS | 81176288 | 81176369 | 81176288 | ID=Msa0429700-mRNA-1:cds;Parent=Msa0429700-mRNA-1 |
chr3_2 | three_prime_UTR | 81176370 | 81176561 | 81176370 | ID=Msa0429700-mRNA-1:three_prime_utr;Parent=Msa0429700-mRNA-1 |
Gene Sequence |
Protein sequence |