Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0429750 | XP_039687709.1 | 96.715 | 1370 | 42 | 2 | 1 | 1367 | 1 | 1370 | 0.0 | 2770 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0429750 | sp|Q9C5X9|HAC1_ARATH | 47.388 | 804 | 380 | 10 | 581 | 1361 | 883 | 1666 | 0.0 | 774 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0429750 | G7J5R6 | 96.076 | 1376 | 45 | 3 | 1 | 1367 | 1 | 1376 | 0.0 | 2755 |
Gene ID | Type | Classification |
---|---|---|
Msa0429750 | TR | TAZ |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0429700 | Msa0429750 | 0.891799 | 2.856289e-74 | -8.615850e-47 |
Msa0429750 | Msa0500990 | 0.888354 | 6.361838e-73 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0429750 | MtrunA17_Chr3g0133461 | 95.960 | 1312 | 42 | 3 | 64 | 1367 | 16 | 1324 | 0.0 | 2620 |
Msa0429750 | MtrunA17_Chr3g0138411 | 69.660 | 1058 | 234 | 16 | 319 | 1367 | 208 | 1187 | 0.0 | 1429 |
Msa0429750 | MtrunA17_Chr3g0138411 | 43.368 | 475 | 180 | 11 | 1 | 434 | 1 | 427 | 2.92e-87 | 310 |
Msa0429750 | MtrunA17_Chr5g0438991 | 69.720 | 928 | 190 | 12 | 448 | 1367 | 111 | 955 | 0.0 | 1251 |
Msa0429750 | MtrunA17_Chr6g0456861 | 68.111 | 831 | 187 | 11 | 543 | 1367 | 2 | 760 | 0.0 | 1122 |
Msa0429750 | MtrunA17_Chr6g0456861 | 53.968 | 63 | 22 | 1 | 19 | 81 | 7 | 62 | 1.64e-11 | 68.9 |
Msa0429750 | MtrunA17_Chr4g0000031 | 47.909 | 789 | 373 | 11 | 593 | 1361 | 908 | 1678 | 0.0 | 756 |
Msa0429750 | MtrunA17_Chr6g0456851 | 62.144 | 597 | 184 | 11 | 526 | 1085 | 242 | 833 | 0.0 | 719 |
Msa0429750 | MtrunA17_Chr6g0456851 | 39.224 | 232 | 87 | 8 | 16 | 234 | 3 | 193 | 4.51e-30 | 129 |
Msa0429750 | MtrunA17_Chr6g0456851 | 64.000 | 75 | 27 | 0 | 1127 | 1201 | 807 | 881 | 6.75e-22 | 102 |
Msa0429750 | MtrunA17_Chr6g0456931 | 74.286 | 245 | 63 | 0 | 794 | 1038 | 1 | 245 | 7.95e-129 | 397 |
Msa0429750 | MtrunA17_Chr5g0401991 | 59.170 | 289 | 44 | 6 | 1023 | 1305 | 1 | 221 | 2.47e-94 | 302 |
Msa0429750 | MtrunA17_Chr5g0402001 | 89.109 | 101 | 11 | 0 | 872 | 972 | 1 | 101 | 2.08e-57 | 193 |
Msa0429750 | MtrunA17_Chr1g0169961 | 53.191 | 188 | 53 | 5 | 501 | 681 | 9 | 168 | 6.84e-47 | 166 |
Msa0429750 | MtrunA17_Chr5g0439001 | 69.697 | 99 | 25 | 2 | 974 | 1072 | 1 | 94 | 1.44e-36 | 134 |
Msa0429750 | MtrunA17_Chr6g0456911 | 87.273 | 55 | 7 | 0 | 1139 | 1193 | 6 | 60 | 9.32e-26 | 102 |
Msa0429750 | MtrunA17_Chr0c02g0489811 | 85.965 | 57 | 8 | 0 | 1137 | 1193 | 5 | 61 | 2.24e-25 | 100 |
Msa0429750 | MtrunA17_Chr7g0229221 | 82.456 | 57 | 10 | 0 | 1137 | 1193 | 5 | 61 | 4.47e-24 | 97.1 |
Msa0429750 | MtrunA17_Chr0c02g0489731 | 78.947 | 57 | 12 | 0 | 1137 | 1193 | 5 | 61 | 1.30e-22 | 93.2 |
Msa0429750 | MtrunA17_Chr0c02g0489721 | 76.087 | 46 | 11 | 0 | 1067 | 1112 | 1 | 46 | 6.41e-20 | 84.3 |
Msa0429750 | MtrunA17_Chr7g0229231 | 76.087 | 46 | 11 | 0 | 1067 | 1112 | 1 | 46 | 6.41e-20 | 84.3 |
Msa0429750 | MtrunA17_Chr6g0456921 | 40.385 | 156 | 34 | 5 | 872 | 1026 | 1 | 98 | 3.63e-19 | 90.5 |
Msa0429750 | MtrunA17_Chr0c02g0489821 | 75.556 | 45 | 11 | 0 | 1069 | 1113 | 1 | 45 | 1.75e-18 | 80.1 |
Msa0429750 | MtrunA17_Chr6g0456941 | 48.515 | 101 | 31 | 2 | 526 | 623 | 149 | 231 | 1.63e-16 | 80.5 |
Msa0429750 | MtrunA17_Chr6g0456781 | 57.143 | 70 | 23 | 3 | 654 | 723 | 25 | 87 | 1.46e-15 | 75.1 |
Msa0429750 | MtrunA17_Chr5g0402011 | 87.097 | 31 | 4 | 0 | 718 | 748 | 21 | 51 | 3.61e-13 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0429750 | AT1G79000.1 | 47.388 | 804 | 380 | 10 | 581 | 1361 | 883 | 1666 | 0.0 | 774 |
Msa0429750 | AT1G79000.2 | 47.388 | 804 | 380 | 10 | 581 | 1361 | 883 | 1666 | 0.0 | 774 |
Msa0429750 | AT1G79000.3 | 47.388 | 804 | 380 | 10 | 581 | 1361 | 859 | 1642 | 0.0 | 773 |
Msa0429750 | AT1G16710.3 | 47.264 | 804 | 381 | 10 | 581 | 1361 | 866 | 1649 | 0.0 | 767 |
Msa0429750 | AT1G16710.10 | 47.264 | 804 | 381 | 10 | 581 | 1361 | 866 | 1649 | 0.0 | 767 |
Msa0429750 | AT1G16710.8 | 47.264 | 804 | 381 | 10 | 581 | 1361 | 866 | 1649 | 0.0 | 767 |
Msa0429750 | AT1G16710.7 | 47.264 | 804 | 381 | 10 | 581 | 1361 | 866 | 1649 | 0.0 | 767 |
Msa0429750 | AT1G16710.1 | 47.264 | 804 | 381 | 10 | 581 | 1361 | 892 | 1675 | 0.0 | 767 |
Msa0429750 | AT1G16710.2 | 47.264 | 804 | 381 | 10 | 581 | 1361 | 863 | 1646 | 0.0 | 766 |
Msa0429750 | AT1G16710.6 | 47.264 | 804 | 381 | 10 | 581 | 1361 | 827 | 1610 | 0.0 | 766 |
Msa0429750 | AT1G16710.4 | 47.264 | 804 | 381 | 10 | 581 | 1361 | 827 | 1610 | 0.0 | 766 |
Msa0429750 | AT1G16710.5 | 47.264 | 804 | 381 | 10 | 581 | 1361 | 827 | 1610 | 0.0 | 766 |
Msa0429750 | AT3G12980.1 | 44.915 | 826 | 403 | 14 | 565 | 1367 | 848 | 1644 | 0.0 | 726 |
Msa0429750 | AT3G12980.2 | 44.915 | 826 | 403 | 14 | 565 | 1367 | 767 | 1563 | 0.0 | 725 |
Msa0429750 | AT1G55970.1 | 40.452 | 885 | 462 | 16 | 522 | 1367 | 588 | 1446 | 0.0 | 649 |
Msa0429750 | AT1G55970.2 | 40.678 | 885 | 446 | 17 | 522 | 1367 | 588 | 1432 | 0.0 | 646 |
Msa0429750 | AT1G67220.1 | 41.519 | 790 | 398 | 18 | 602 | 1359 | 604 | 1361 | 0.0 | 604 |
Msa0429750 | AT1G16710.9 | 49.820 | 556 | 263 | 6 | 581 | 1123 | 866 | 1418 | 5.31e-177 | 566 |
Find 279 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACTCTTTGTCCTTCTTTC+AGG | 0.058574 | 3_2:-81227365 | None:intergenic |
CCCTGGTAGGCCATATATTT+TGG | 0.151804 | 3_2:-81228360 | None:intergenic |
CAAGCTTATCATTTAATAAA+TGG | 0.192045 | 3_2:+81229794 | Msa0429750:three_prime_UTR |
TTACTGAAGGCTGCTAATTT+TGG | 0.192321 | 3_2:+81226588 | Msa0429750:CDS |
AGAGTAGATTATTTGAAAAT+AGG | 0.198691 | 3_2:+81228826 | Msa0429750:CDS |
TCTCACATTTCCAGCTCTTT+TGG | 0.200246 | 3_2:-81229004 | None:intergenic |
GAAAGTGAATAAGCAGTTTC+TGG | 0.202627 | 3_2:+81227010 | Msa0429750:CDS |
TTCTTCTCTTGATCAACTTT+TGG | 0.216290 | 3_2:-81225469 | None:intergenic |
TTACGGTTGTATACCATTTC+AGG | 0.223859 | 3_2:-81223718 | None:intergenic |
AATTCTGAATGTTGCACTTT+TGG | 0.226098 | 3_2:-81224794 | None:intergenic |
AAATGGTATACAACCGTAAT+TGG | 0.232510 | 3_2:+81223722 | Msa0429750:CDS |
CACTGAATGCAAGGAAATTC+AGG | 0.241855 | 3_2:+81228462 | Msa0429750:CDS |
TGTAACTTACCTGTTTCTTA+TGG | 0.254857 | 3_2:+81224250 | Msa0429750:CDS |
GATGACAAACAAAATAAAAT+TGG | 0.261822 | 3_2:+81225604 | Msa0429750:CDS |
AAAATGATGGATTCAGGTTT+TGG | 0.264675 | 3_2:+81224695 | Msa0429750:CDS |
ATTAGGTTGGCCAAAATATA+TGG | 0.272286 | 3_2:+81228350 | Msa0429750:intron |
TATCCCTCCAGTTGCTGATA+TGG | 0.276376 | 3_2:+81224219 | Msa0429750:CDS |
AATGTCTTTGGCAGTGTCTT+TGG | 0.279840 | 3_2:-81228109 | None:intergenic |
CCAGAACTTATTACAATTGA+TGG | 0.286120 | 3_2:+81225367 | Msa0429750:CDS |
CGCTCAAAAGAAATTGAAAA+TGG | 0.288181 | 3_2:+81226552 | Msa0429750:CDS |
GAGTAGATTATTTGAAAATA+GGG | 0.292484 | 3_2:+81228827 | Msa0429750:CDS |
TTTGAGTCAACTTGTGTTCA+TGG | 0.292920 | 3_2:-81229082 | None:intergenic |
AATTCATCAAAACATCTCTT+TGG | 0.303541 | 3_2:-81223655 | None:intergenic |
AAAACTGATGAAGAATTTCT+TGG | 0.304548 | 3_2:-81223619 | None:intergenic |
ATGGTCTTTAAAGCTCTATT+TGG | 0.306293 | 3_2:-81228069 | None:intergenic |
ATACAGAAAATGATGGATTC+AGG | 0.307913 | 3_2:+81224689 | Msa0429750:CDS |
AGCCTATTCCTACTGCATTC+TGG | 0.312043 | 3_2:+81225116 | Msa0429750:CDS |
TCCTATAATACTGGTTACTA+TGG | 0.313926 | 3_2:+81224124 | Msa0429750:CDS |
CTACAACAACAGAAGAGATT+TGG | 0.316078 | 3_2:+81226497 | Msa0429750:CDS |
TCGCATCACTAAAATGTCTT+TGG | 0.318012 | 3_2:-81228121 | None:intergenic |
GGAATGTATGTCCAGGAGTT+TGG | 0.324631 | 3_2:+81227272 | Msa0429750:CDS |
TCAGGAGTCAAATGAGAAAA+TGG | 0.324783 | 3_2:+81229178 | Msa0429750:CDS |
CTTCGTTTACCATGAGATAT+TGG | 0.325834 | 3_2:+81227403 | Msa0429750:CDS |
CCATCAATTGTAATAAGTTC+TGG | 0.331586 | 3_2:-81225367 | None:intergenic |
TTTGTTTGCTTCTCTTGATC+AGG | 0.340519 | 3_2:-81225676 | None:intergenic |
AATGTAATGGTTGATACATT+TGG | 0.340524 | 3_2:+81224905 | Msa0429750:CDS |
GTTTCCTGACTTGCTACATA+TGG | 0.342073 | 3_2:+81227564 | Msa0429750:CDS |
GTTCCACATTACTCTCATAA+TGG | 0.342403 | 3_2:-81224832 | None:intergenic |
GGATGTGGTTGAAAAGAATA+AGG | 0.343529 | 3_2:-81224773 | None:intergenic |
TCTCGTTTGCCATACTTTGA+TGG | 0.348808 | 3_2:+81227955 | Msa0429750:CDS |
TTCATCTTGGTGGGAGTACT+TGG | 0.349443 | 3_2:+81223587 | Msa0429750:CDS |
CTTTAGCATCTGTCCCCTCT+TGG | 0.355618 | 3_2:-81225633 | None:intergenic |
GCCATAGTAACCAGTATTAT+AGG | 0.357708 | 3_2:-81224125 | None:intergenic |
CATTTGCTCTGCATGCTATA+AGG | 0.358326 | 3_2:+81229043 | Msa0429750:CDS |
GGCAGTGTCTTTGGAAGGAT+TGG | 0.359255 | 3_2:-81228100 | None:intergenic |
GTGCGAAATTCGAGTGAATC+GGG | 0.363640 | 3_2:+81229404 | Msa0429750:CDS |
TCAGCGTGTGCAAGCTCTAC+TGG | 0.369624 | 3_2:+81224090 | Msa0429750:CDS |
GGATGAGATATTCCCGCTTC+TGG | 0.370448 | 3_2:-81224151 | None:intergenic |
TTTCTGTAGAAAAGAAGAAT+TGG | 0.372012 | 3_2:+81226209 | Msa0429750:CDS |
CCTTTCGAGGGAATCAGTTT+AGG | 0.373188 | 3_2:-81225256 | None:intergenic |
GAGGACATACAAGGAAGAAT+TGG | 0.373626 | 3_2:+81225403 | Msa0429750:CDS |
TGGTCACTTAGCACGGTTCT+TGG | 0.373788 | 3_2:-81226624 | None:intergenic |
TTCTTATGGTGGAAGCAATC+TGG | 0.380010 | 3_2:+81224264 | Msa0429750:CDS |
ATGCCATAGATTAGGGAATC+TGG | 0.384722 | 3_2:-81225307 | None:intergenic |
TCTTGATTTGAGAACAGTTT+GGG | 0.392126 | 3_2:-81229359 | None:intergenic |
GTCTATCATGCCATAGATTA+GGG | 0.394178 | 3_2:-81225314 | None:intergenic |
TTCTTTGTTGCTGCTGAGAA+AGG | 0.394757 | 3_2:+81227913 | Msa0429750:CDS |
AGTCTATCATGCCATAGATT+AGG | 0.395208 | 3_2:-81225315 | None:intergenic |
AAAAGAAGAATTGGATGTAC+AGG | 0.398942 | 3_2:+81226218 | Msa0429750:CDS |
CTTCTGTTTCAGCAGATTGA+AGG | 0.398990 | 3_2:+81227230 | Msa0429750:CDS |
ACTGAAGAAAATATTGTTGT+TGG | 0.399474 | 3_2:+81227868 | Msa0429750:CDS |
GATATATCAATCTGGGAATC+AGG | 0.403548 | 3_2:+81229160 | Msa0429750:CDS |
GAGCCAGATTCCCTAATCTA+TGG | 0.403562 | 3_2:+81225304 | Msa0429750:CDS |
TTTCATTCTGCGGGAGTTAA+GGG | 0.405364 | 3_2:+81224872 | Msa0429750:CDS |
ATGGATCCTATTCCTACTAA+TGG | 0.406298 | 3_2:+81225019 | Msa0429750:CDS |
GTTCCTAAGTCCTATAATAC+TGG | 0.409319 | 3_2:+81224115 | Msa0429750:CDS |
CAGCAGTCTCCATCAAAGTA+TGG | 0.411615 | 3_2:-81227964 | None:intergenic |
GAGTTCACAGTTCAAATAGT+TGG | 0.411786 | 3_2:+81229767 | Msa0429750:three_prime_UTR |
CTTGGTGAGAGTAGGCATAC+TGG | 0.412661 | 3_2:-81225092 | None:intergenic |
TTGATCAGGTGTTAGTTCAC+TGG | 0.412828 | 3_2:-81225662 | None:intergenic |
TTCTTGATTTGAGAACAGTT+TGG | 0.414152 | 3_2:-81229360 | None:intergenic |
CACTCGAATTTCGCACCTAC+TGG | 0.416982 | 3_2:-81229397 | None:intergenic |
TCAGAGTAGGATTGTGTAGA+TGG | 0.417165 | 3_2:-81228935 | None:intergenic |
CGAGTTGCATACACTTTGTC+AGG | 0.417455 | 3_2:+81228668 | Msa0429750:CDS |
CATATTGCAAGTGAGCTATA+AGG | 0.418930 | 3_2:-81228390 | None:intergenic |
CGCATTCAGAGCCAAACTCC+TGG | 0.419362 | 3_2:-81227283 | None:intergenic |
GCCTGTGCTCCTTCAAGAAA+AGG | 0.420899 | 3_2:+81227587 | Msa0429750:CDS |
TTTCCTGACTTGCTACATAT+GGG | 0.421164 | 3_2:+81227565 | Msa0429750:CDS |
CCACAACATGAACAAACAAT+TGG | 0.421500 | 3_2:-81226165 | None:intergenic |
TCAAGACCGATATATCAATC+TGG | 0.421778 | 3_2:+81229152 | Msa0429750:CDS |
TGTATATCCTCTCCATTAGT+AGG | 0.423314 | 3_2:-81225031 | None:intergenic |
GATCAACTTCCACTGAGTTT+CGG | 0.425661 | 3_2:-81225339 | None:intergenic |
GGTGGGAAAATCACATTCAA+TGG | 0.426047 | 3_2:+81226276 | Msa0429750:CDS |
CGATGAAGTACTTGAAGAAC+CGG | 0.433225 | 3_2:+81226338 | Msa0429750:CDS |
GCAATATCAACCACAGAAGT+TGG | 0.433488 | 3_2:+81224583 | Msa0429750:CDS |
TGATTCCCAGATTGATATAT+CGG | 0.436292 | 3_2:-81229158 | None:intergenic |
AAGGGTGCGCATCAGAACTA+TGG | 0.436516 | 3_2:-81228635 | None:intergenic |
TGCAACTCGCCATTCTTTGA+AGG | 0.439300 | 3_2:-81228654 | None:intergenic |
CGGCGTAGCTTATCATTCTT+CGG | 0.441625 | 3_2:-81227653 | None:intergenic |
CTCTAGGAATTGCAAAGACT+TGG | 0.444404 | 3_2:+81229470 | Msa0429750:CDS |
ATGTATACACAACGCTGATT+CGG | 0.444563 | 3_2:-81227311 | None:intergenic |
GACCATCATCGAGGAATACT+TGG | 0.446298 | 3_2:-81228907 | None:intergenic |
TCTTTGTTGCTGCTGAGAAA+GGG | 0.448017 | 3_2:+81227914 | Msa0429750:CDS |
GACAGACAGTTGCAAATCAA+TGG | 0.448888 | 3_2:+81225513 | Msa0429750:CDS |
ATCATTCAGAATGAGCAACT+TGG | 0.449014 | 3_2:+81223866 | Msa0429750:CDS |
ATCATTATGTTTAGTGTTGG+AGG | 0.449050 | 3_2:-81228793 | None:intergenic |
GCCAAAATATATGGCCTACC+AGG | 0.452024 | 3_2:+81228359 | Msa0429750:CDS |
CCTGTGCTCCTTCAAGAAAA+GGG | 0.454880 | 3_2:+81227588 | Msa0429750:CDS |
TTGCTTCCACCATAAGAAAC+AGG | 0.456261 | 3_2:-81224259 | None:intergenic |
TCCTCAGTTACAACTGTTAG+TGG | 0.459002 | 3_2:+81225196 | Msa0429750:CDS |
AGGGATCTTCCCATTGTAGT+AGG | 0.461958 | 3_2:-81224494 | None:intergenic |
TTATTCCATTGATCAAAACT+TGG | 0.465205 | 3_2:-81224737 | None:intergenic |
CATCAATTGTAATAAGTTCT+GGG | 0.467890 | 3_2:-81225366 | None:intergenic |
CTTATAGCATGCAGAGCAAA+TGG | 0.467941 | 3_2:-81229042 | None:intergenic |
CAAACTGAAACTGAGACTTC+TGG | 0.468204 | 3_2:-81228869 | None:intergenic |
TACTATGGCGTGCCAGAAGC+GGG | 0.468456 | 3_2:+81224139 | Msa0429750:CDS |
TGAGCAACTTGGGCCTGCGC+TGG | 0.468657 | 3_2:+81223877 | Msa0429750:CDS |
TGCCGTGAAGTGATAGTGTC+TGG | 0.468924 | 3_2:+81228424 | Msa0429750:CDS |
TTTGATGGAGACTGCTGGTC+TGG | 0.471841 | 3_2:+81227970 | Msa0429750:CDS |
TAAAACTTGAATCTTCAGAT+TGG | 0.472509 | 3_2:-81224517 | None:intergenic |
AATATCATTATGTTTAGTGT+TGG | 0.474871 | 3_2:-81228796 | None:intergenic |
AGCACATCCATATCAGCAAC+TGG | 0.475712 | 3_2:-81224226 | None:intergenic |
TTCTTCAAGTACTTCATCGT+TGG | 0.477109 | 3_2:-81226334 | None:intergenic |
GTCCAGAATGCAGTAGGAAT+AGG | 0.478712 | 3_2:-81225118 | None:intergenic |
GATCTATAAGAGAATTCAGC+AGG | 0.480043 | 3_2:-81227056 | None:intergenic |
TCCTCTCCATTAGTAGGAAT+AGG | 0.482957 | 3_2:-81225025 | None:intergenic |
TTATACTTGCTGCTCACTCT+AGG | 0.483492 | 3_2:+81229454 | Msa0429750:CDS |
GGCAGGTTATGAGCAATAGA+AGG | 0.483523 | 3_2:-81224172 | None:intergenic |
ACTTACCAATGCTGCTTCAA+AGG | 0.483696 | 3_2:+81223910 | Msa0429750:CDS |
AGGCCCATATGTAGCAAGTC+AGG | 0.483952 | 3_2:-81227568 | None:intergenic |
AACTTGAATCTTCAGATTGG+AGG | 0.484803 | 3_2:-81224514 | None:intergenic |
ACCAGCTTCTAAGCCTTTCG+AGG | 0.488323 | 3_2:-81225269 | None:intergenic |
ATTACTTCTGAGGAGGAAGC+AGG | 0.490995 | 3_2:+81226084 | Msa0429750:CDS |
GGTGCGAAATTCGAGTGAAT+CGG | 0.490997 | 3_2:+81229403 | Msa0429750:CDS |
TCATCAAAACATCTCTTTGG+CGG | 0.493031 | 3_2:-81223652 | None:intergenic |
CTGGCGGTATCATCCTGAAA+TGG | 0.493874 | 3_2:+81223705 | Msa0429750:CDS |
TCCCAGACACTATCACTTCA+CGG | 0.494548 | 3_2:-81228426 | None:intergenic |
GGAAGGATTGGCATGTCCCA+TGG | 0.498688 | 3_2:-81228088 | None:intergenic |
AAATCAATGGAAATTGACAT+TGG | 0.499856 | 3_2:+81225526 | Msa0429750:CDS |
TCAGCAGGGTAATTCTCCTC+TGG | 0.499997 | 3_2:-81227041 | None:intergenic |
AATCAATGGAAATTGACATT+GGG | 0.503687 | 3_2:+81225527 | Msa0429750:CDS |
ACATCATAGCTTTCAAGCCC+TGG | 0.503981 | 3_2:-81224932 | None:intergenic |
CATTATGTTTAGTGTTGGAG+GGG | 0.505283 | 3_2:-81228791 | None:intergenic |
GTTGATACATTTGGACAGCC+AGG | 0.507113 | 3_2:+81224914 | Msa0429750:CDS |
GATGCGCACCCTTCAAAGAA+TGG | 0.507431 | 3_2:+81228645 | Msa0429750:CDS |
CTCATAATGGAGAGAAGAGA+GGG | 0.508941 | 3_2:-81224819 | None:intergenic |
TAGGATTGTGTAGATGGTAG+AGG | 0.509799 | 3_2:-81228929 | None:intergenic |
TTCTAAGTGGTCACTTAGCA+CGG | 0.510372 | 3_2:-81226631 | None:intergenic |
TTGTAGGTTATAGCTGCAAA+AGG | 0.511094 | 3_2:+81226948 | Msa0429750:intron |
AGTGTAGCATTCCACGGTGC+AGG | 0.512236 | 3_2:+81229493 | Msa0429750:CDS |
ATGTGTGAACAAATCAATCA+AGG | 0.513659 | 3_2:-81225728 | None:intergenic |
TGCCAAAATACAGAAAATGA+TGG | 0.514444 | 3_2:+81224682 | Msa0429750:CDS |
TGCAGTAGGAATAGGCTCCT+TGG | 0.514495 | 3_2:-81225110 | None:intergenic |
ACAAACCTTTGAAGCAGCAT+TGG | 0.514651 | 3_2:-81223915 | None:intergenic |
ATGTGTTACAAGACTTCTAA+AGG | 0.514902 | 3_2:+81226255 | Msa0429750:CDS |
AGACTATGAAAAGATGTTGA+AGG | 0.515920 | 3_2:+81228038 | Msa0429750:CDS |
CCCTCGAAAGGCTTAGAAGC+TGG | 0.515949 | 3_2:+81225268 | Msa0429750:CDS |
CACGCTGATTCAATGTCTCC+AGG | 0.517950 | 3_2:-81224075 | None:intergenic |
TCATTATGTTTAGTGTTGGA+GGG | 0.517970 | 3_2:-81228792 | None:intergenic |
ACTTGAATCTTCAGATTGGA+GGG | 0.518206 | 3_2:-81224513 | None:intergenic |
TTTAACACAGATTACTTCTG+AGG | 0.520413 | 3_2:+81226074 | Msa0429750:intron |
TCCATTGATCAAAACTTGGA+TGG | 0.525144 | 3_2:-81224733 | None:intergenic |
CTTTGTTGCTGCTGAGAAAG+GGG | 0.525499 | 3_2:+81227915 | Msa0429750:CDS |
GTGGGAAAATCACATTCAAT+GGG | 0.525911 | 3_2:+81226277 | Msa0429750:CDS |
CCAATTGTTTGTTCATGTTG+TGG | 0.526305 | 3_2:+81226165 | Msa0429750:CDS |
CAAGACCGATATATCAATCT+GGG | 0.526622 | 3_2:+81229153 | Msa0429750:CDS |
TATGTCCTCTCAATCTGCCT+CGG | 0.527546 | 3_2:+81224538 | Msa0429750:CDS |
CATGTCGAGACATTGCATCC+TGG | 0.528409 | 3_2:-81224999 | None:intergenic |
AACTTACCTGTTTCTTATGG+TGG | 0.529340 | 3_2:+81224253 | Msa0429750:CDS |
CAGCGTGTGCAAGCTCTACT+GGG | 0.531640 | 3_2:+81224091 | Msa0429750:CDS |
CTGCTGGTCTGGTAATGCTA+TGG | 0.533073 | 3_2:+81227981 | Msa0429750:CDS |
TTGTCACGGGTATAAAATCC+AGG | 0.533640 | 3_2:+81224981 | Msa0429750:CDS |
GGGGATAAACACCAATGTAA+TGG | 0.535712 | 3_2:+81224892 | Msa0429750:CDS |
GATGAATTAAGCAATCAAGT+AGG | 0.536338 | 3_2:+81223670 | Msa0429750:CDS |
GCAAAGTGGGAAAATGTTGA+AGG | 0.536852 | 3_2:+81226687 | Msa0429750:CDS |
CATGAACAAACAATTGGTAC+TGG | 0.538233 | 3_2:-81226159 | None:intergenic |
AATTTAAACAATATTGTCAC+GGG | 0.538538 | 3_2:+81224968 | Msa0429750:CDS |
TTCTGAAAATCCAACTTCTG+TGG | 0.541275 | 3_2:-81224593 | None:intergenic |
TTTCAAATAATCTACTCTCA+AGG | 0.542071 | 3_2:-81228821 | None:intergenic |
TGCCAAGTATTCCTCGATGA+TGG | 0.542961 | 3_2:+81228905 | Msa0429750:CDS |
GCATTTGTCCAGAATGCAGT+AGG | 0.543207 | 3_2:-81225124 | None:intergenic |
GCAACCTTGCTTATGAGAGC+AGG | 0.546870 | 3_2:-81225565 | None:intergenic |
ACAATGTATTCCAAAAGAGC+TGG | 0.547262 | 3_2:+81228994 | Msa0429750:CDS |
TTGATCAAATGTTAGCTCAT+CGG | 0.547616 | 3_2:-81225158 | None:intergenic |
ACATACAGTTATTTGCGTGT+TGG | 0.550948 | 3_2:-81224324 | None:intergenic |
CAATTTAAACAATATTGTCA+CGG | 0.551389 | 3_2:+81224967 | Msa0429750:CDS |
TCATTCAGAATGAGCAACTT+GGG | 0.553426 | 3_2:+81223867 | Msa0429750:CDS |
TTTACAACAGTCATCAGAGT+AGG | 0.553593 | 3_2:-81228948 | None:intergenic |
TGCTGAGAAAGGGGACTCCA+AGG | 0.553735 | 3_2:+81227924 | Msa0429750:CDS |
AGGGAACGAGAATCTTGATA+AGG | 0.553771 | 3_2:+81226707 | Msa0429750:CDS |
CATACTTTGATGGAGACTGC+TGG | 0.554044 | 3_2:+81227965 | Msa0429750:CDS |
TCTGCATGCTATAAGGATAG+AGG | 0.554961 | 3_2:+81229050 | Msa0429750:CDS |
ATCTGCCTCGGTGAATACTT+CGG | 0.556680 | 3_2:+81224550 | Msa0429750:CDS |
AATGCAATAAATGCAAAAGA+TGG | 0.558178 | 3_2:+81226454 | Msa0429750:CDS |
AGCGAGAAGATGTTTGCCAA+GGG | 0.559968 | 3_2:+81223562 | None:intergenic |
ACACATGCCAATTATGTGAA+AGG | 0.560127 | 3_2:+81226118 | Msa0429750:CDS |
TCTTTGGCAGTGTCTTTGGA+AGG | 0.560134 | 3_2:-81228105 | None:intergenic |
AAAATTGGATTCAACCAAGA+GGG | 0.562248 | 3_2:+81225619 | Msa0429750:CDS |
CACAAAGATTCATTGATCAA+CGG | 0.562806 | 3_2:-81229738 | None:intergenic |
AGGAAATTCAGGAGTGCGAA+AGG | 0.562968 | 3_2:+81228473 | Msa0429750:CDS |
ATGGATTCAGTATTATCAGA+AGG | 0.564182 | 3_2:-81224650 | None:intergenic |
CATGCAAGAGAGAGCAAAGT+GGG | 0.567140 | 3_2:+81226674 | Msa0429750:CDS |
GAACCATCACCAGGAAAACA+AGG | 0.569408 | 3_2:-81224193 | None:intergenic |
AGTAGCAATATTTCCAGCGC+AGG | 0.569879 | 3_2:-81223890 | None:intergenic |
GAACAGTTTGGGTGAGAGCA+AGG | 0.570733 | 3_2:-81229348 | None:intergenic |
TAAAATTGGATTCAACCAAG+AGG | 0.570792 | 3_2:+81225618 | Msa0429750:CDS |
TGCAACTGTCTGTCACGACA+TGG | 0.574615 | 3_2:-81225504 | None:intergenic |
TGATCAATGGAATAATGGGA+TGG | 0.574870 | 3_2:+81224745 | Msa0429750:CDS |
GCAACTCGCCATTCTTTGAA+GGG | 0.578144 | 3_2:-81228653 | None:intergenic |
TAACCAGTATTATAGGACTT+AGG | 0.578545 | 3_2:-81224118 | None:intergenic |
ACATATTAATAGTCTCAGAA+AGG | 0.580375 | 3_2:+81225765 | Msa0429750:CDS |
GTTGCTAATTGATCTGATGT+TGG | 0.582522 | 3_2:-81224290 | None:intergenic |
AAGGTTCAGCATTAGCTGCA+CGG | 0.583631 | 3_2:-81229329 | None:intergenic |
TTCATTCTGCGGGAGTTAAG+GGG | 0.586503 | 3_2:+81224873 | Msa0429750:CDS |
CAGGATGCAATGTCTCGACA+TGG | 0.588607 | 3_2:+81225000 | Msa0429750:CDS |
AAGCGAGAAGATGTTTGCCA+AGG | 0.589431 | 3_2:+81223561 | None:intergenic |
GGGATAGATGAACCATCACC+AGG | 0.589609 | 3_2:-81224202 | None:intergenic |
CCCACCAAGATGAAAACCCT+TGG | 0.589685 | 3_2:-81223578 | None:intergenic |
TGATAGTGTCTGGGAAGCGA+TGG | 0.590031 | 3_2:+81228434 | Msa0429750:CDS |
TTACTATGGCGTGCCAGAAG+CGG | 0.592212 | 3_2:+81224138 | Msa0429750:CDS |
CCTGAAAGAAGGACAAAGAG+TGG | 0.592455 | 3_2:+81227365 | Msa0429750:CDS |
AAATAGAGCTTTAAAGACCA+TGG | 0.593540 | 3_2:+81228071 | Msa0429750:CDS |
CAAACGAGAAGCTGTCACCT+TGG | 0.594598 | 3_2:-81227941 | None:intergenic |
AAGTAGGATTCTCCTCAGAC+TGG | 0.594890 | 3_2:+81223686 | Msa0429750:CDS |
CTTTAGCGTCTGTCCCCTCG+TGG | 0.599122 | 3_2:-81225432 | None:intergenic |
TCCTATTCCTACTAATGGAG+AGG | 0.602402 | 3_2:+81225024 | Msa0429750:CDS |
AAATGTATCAACCATTACAT+TGG | 0.602722 | 3_2:-81224903 | None:intergenic |
CCCACTAACAGTTGTAACTG+AGG | 0.603428 | 3_2:-81225197 | None:intergenic |
AACACAGATTACTTCTGAGG+AGG | 0.604308 | 3_2:+81226077 | Msa0429750:intron |
AAAGAAGAATTGGATGTACA+GGG | 0.605113 | 3_2:+81226219 | Msa0429750:CDS |
CCAAAATATATGGCCTACCA+GGG | 0.605422 | 3_2:+81228360 | Msa0429750:CDS |
TTACTTCTGAGGAGGAAGCA+GGG | 0.608500 | 3_2:+81226085 | Msa0429750:CDS |
ATTCACCGAGGCAGATTGAG+AGG | 0.610362 | 3_2:-81224543 | None:intergenic |
CTGTGCTCCTTCAAGAAAAG+GGG | 0.610873 | 3_2:+81227589 | Msa0429750:CDS |
GCTTGAAAGCTATGATGTGA+TGG | 0.612988 | 3_2:+81224937 | Msa0429750:CDS |
GATGATGAAGAGGACATACA+AGG | 0.616251 | 3_2:+81225394 | Msa0429750:CDS |
CATCACCAGGAAAACAAGGC+AGG | 0.617573 | 3_2:-81224189 | None:intergenic |
CAGGAGTTTGGCTCTGAATG+CGG | 0.618695 | 3_2:+81227284 | Msa0429750:CDS |
TGGATTCAGTATTATCAGAA+GGG | 0.619302 | 3_2:-81224649 | None:intergenic |
CCTAAACTGATTCCCTCGAA+AGG | 0.619511 | 3_2:+81225256 | Msa0429750:CDS |
AATAGAGCTTTAAAGACCAT+GGG | 0.619881 | 3_2:+81228072 | Msa0429750:CDS |
TTGATACATTTGGACAGCCA+GGG | 0.623297 | 3_2:+81224915 | Msa0429750:CDS |
CAAAGTGGGAAAATGTTGAA+GGG | 0.624977 | 3_2:+81226688 | Msa0429750:CDS |
TGCGAAATTCGAGTGAATCG+GGG | 0.624993 | 3_2:+81229405 | Msa0429750:CDS |
TCTCCATTATGAGAGTAATG+TGG | 0.625625 | 3_2:+81224829 | Msa0429750:CDS |
GCAGGAGGAATATATGAACC+TGG | 0.625899 | 3_2:+81224057 | Msa0429750:intron |
CCTCAGTTACAACTGTTAGT+GGG | 0.626164 | 3_2:+81225197 | Msa0429750:CDS |
TGATGGTGATGATGATGAAG+AGG | 0.626309 | 3_2:+81225384 | Msa0429750:CDS |
CCAGCTTCTAAGCCTTTCGA+GGG | 0.626326 | 3_2:-81225268 | None:intergenic |
GTTACAAGACTTCTAAAGGT+GGG | 0.626500 | 3_2:+81226259 | Msa0429750:CDS |
CATGGTAAACGAAGGTACGA+AGG | 0.628852 | 3_2:-81227394 | None:intergenic |
TTTAGAAGTCTTGTAACACA+TGG | 0.632450 | 3_2:-81226253 | None:intergenic |
GCAGAGCAAATGGTACACTC+TGG | 0.633761 | 3_2:-81229032 | None:intergenic |
TCTCATAATGGAGAGAAGAG+AGG | 0.633876 | 3_2:-81224820 | None:intergenic |
CATCCATATCAGCAACTGGA+GGG | 0.633921 | 3_2:-81224222 | None:intergenic |
AAAGCATGCTCACTTACTGA+AGG | 0.634634 | 3_2:+81226575 | Msa0429750:CDS |
ATGGTAAACGAAGGTACGAA+GGG | 0.635264 | 3_2:-81227393 | None:intergenic |
CAGTATGCCTACTCTCACCA+AGG | 0.636206 | 3_2:+81225093 | Msa0429750:CDS |
TATGCCTGCTCTCATAAGCA+AGG | 0.636968 | 3_2:+81225561 | Msa0429750:CDS |
AGGATGATACCGCCAGTCTG+AGG | 0.637708 | 3_2:-81223698 | None:intergenic |
TGTTACAAGACTTCTAAAGG+TGG | 0.638383 | 3_2:+81226258 | Msa0429750:CDS |
ACTTGGAGTGTAGCATTCCA+CGG | 0.640972 | 3_2:+81229487 | Msa0429750:CDS |
AAAGAAATGATCATATACGT+TGG | 0.641068 | 3_2:-81227896 | None:intergenic |
TGGAATTTAATCTGATGCCG+TGG | 0.642107 | 3_2:-81225072 | None:intergenic |
GCCGTGAAGTGATAGTGTCT+GGG | 0.643577 | 3_2:+81228425 | Msa0429750:CDS |
GATAGACTGCCGAAACTCAG+TGG | 0.644616 | 3_2:+81225330 | Msa0429750:CDS |
ACTAATGGAGAGGATATACA+AGG | 0.650656 | 3_2:+81225034 | Msa0429750:CDS |
ATTAACAACATGTCTAACAG+TGG | 0.650867 | 3_2:-81224621 | None:intergenic |
ATAGGCTCCTTGGTGAGAGT+AGG | 0.651101 | 3_2:-81225100 | None:intergenic |
GTTTCTGGATATCATTCCAG+AGG | 0.661258 | 3_2:+81227025 | Msa0429750:CDS |
TAGGATTCTCCTCAGACTGG+CGG | 0.662995 | 3_2:+81223689 | Msa0429750:CDS |
CAATATCTCATGGTAAACGA+AGG | 0.666016 | 3_2:-81227402 | None:intergenic |
AGAATTGGATTCAACCACGA+GGG | 0.666202 | 3_2:+81225418 | Msa0429750:CDS |
CGAAGAATGATAAGCTACGC+CGG | 0.667085 | 3_2:+81227654 | Msa0429750:CDS |
AGCTGTTCTCTCATGCCAGT+AGG | 0.676221 | 3_2:+81229382 | Msa0429750:CDS |
ATCTATAAGAGAATTCAGCA+GGG | 0.680316 | 3_2:-81227055 | None:intergenic |
TCGAGGAATACTTGGCACGA+CGG | 0.681417 | 3_2:-81228899 | None:intergenic |
AAATTGGATTCAACCAAGAG+GGG | 0.683045 | 3_2:+81225620 | Msa0429750:CDS |
GGCAGAACTAAATTTGACCA+CGG | 0.684062 | 3_2:+81225055 | Msa0429750:CDS |
GAATTGGATTCAACCACGAG+GGG | 0.685446 | 3_2:+81225419 | Msa0429750:CDS |
AGAATGATAAGCTACGCCGG+TGG | 0.695717 | 3_2:+81227657 | Msa0429750:CDS |
TCATAATGGAGAGAAGAGAG+GGG | 0.696827 | 3_2:-81224818 | None:intergenic |
GGAGGGGATATCATCAACAA+CGG | 0.699125 | 3_2:-81228775 | None:intergenic |
ACATCCATATCAGCAACTGG+AGG | 0.703827 | 3_2:-81224223 | None:intergenic |
TCATGCAAGAGAGAGCAAAG+TGG | 0.716033 | 3_2:+81226673 | Msa0429750:CDS |
ATAACAACACACCTGCACCG+TGG | 0.731435 | 3_2:-81229504 | None:intergenic |
ATGGTAGAGGACCATCATCG+AGG | 0.748774 | 3_2:-81228916 | None:intergenic |
AAGAATTGGATTCAACCACG+AGG | 0.755598 | 3_2:+81225417 | Msa0429750:CDS |
ATCTTCCGAAGTATTCACCG+AGG | 0.761656 | 3_2:-81224555 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATATA+AGG | - | chr3_2:81226870-81226889 | None:intergenic | 0.0% |
!! | TAATTGTTAAAATAGAATTA+TGG | - | chr3_2:81226053-81226072 | None:intergenic | 10.0% |
!!! | ATTTAATTTTCAAAGAAATG+TGG | + | chr3_2:81223772-81223791 | Msa0429750:intron | 15.0% |
!! | ATTATGTAAATAACTTAAAC+TGG | - | chr3_2:81228291-81228310 | None:intergenic | 15.0% |
!!! | TTTTTCTTCTTATCCAATTA+CGG | - | chr3_2:81223738-81223757 | None:intergenic | 20.0% |
!!! | CAATTGTTTTTCTACAAATT+TGG | + | chr3_2:81224035-81224054 | Msa0429750:intron | 20.0% |
!! | CAATTTAAACAATATTGTCA+CGG | + | chr3_2:81224967-81224986 | Msa0429750:CDS | 20.0% |
!! | AATTTAAACAATATTGTCAC+GGG | + | chr3_2:81224968-81224987 | Msa0429750:CDS | 20.0% |
!! | GATGACAAACAAAATAAAAT+TGG | + | chr3_2:81225604-81225623 | Msa0429750:CDS | 20.0% |
!! | CTAAGAAAAATCTAGAAAAA+AGG | + | chr3_2:81226310-81226329 | Msa0429750:CDS | 20.0% |
!! | TAATCGATATTAAAACTTAC+CGG | - | chr3_2:81226360-81226379 | None:intergenic | 20.0% |
!! | GATAAGAATAAGAAAATGAT+AGG | - | chr3_2:81226776-81226795 | None:intergenic | 20.0% |
!! | ATAAAAATACCAATATCTCA+TGG | - | chr3_2:81227415-81227434 | None:intergenic | 20.0% |
!! | ACATAAATAGAAAGAATGTA+AGG | - | chr3_2:81227485-81227504 | None:intergenic | 20.0% |
!!! | ACCTTGATTTTTGTAAAAAA+AGG | + | chr3_2:81227540-81227559 | Msa0429750:CDS | 20.0% |
!!! | CCTTGATTTTTGTAAAAAAA+GGG | + | chr3_2:81227541-81227560 | Msa0429750:CDS | 20.0% |
!!! | CTTGATTTTTGTAAAAAAAG+GGG | + | chr3_2:81227542-81227561 | Msa0429750:CDS | 20.0% |
!! | CAAACATTATAAATATTCAG+TGG | - | chr3_2:81227814-81227833 | None:intergenic | 20.0% |
!! | TTTATAATGTTTGTTTATGC+AGG | + | chr3_2:81227821-81227840 | Msa0429750:intron | 20.0% |
!! | GTATCTATCAATGTTAAAAA+AGG | + | chr3_2:81227843-81227862 | Msa0429750:CDS | 20.0% |
!! | TTCATTCACTCAATTATAAA+AGG | - | chr3_2:81228244-81228263 | None:intergenic | 20.0% |
!!! | GCATATGTATTCATTTTAAA+GGG | - | chr3_2:81228540-81228559 | None:intergenic | 20.0% |
!!! | AGCATATGTATTCATTTTAA+AGG | - | chr3_2:81228541-81228560 | None:intergenic | 20.0% |
!! | AATATCATTATGTTTAGTGT+TGG | - | chr3_2:81228799-81228818 | None:intergenic | 20.0% |
!! | AGAGTAGATTATTTGAAAAT+AGG | + | chr3_2:81228826-81228845 | Msa0429750:CDS | 20.0% |
!! | GAGTAGATTATTTGAAAATA+GGG | + | chr3_2:81228827-81228846 | Msa0429750:CDS | 20.0% |
!! | TTTAACCATAAAAAATGACT+TGG | - | chr3_2:81229602-81229621 | None:intergenic | 20.0% |
!!! | TATATTTATGTTGATTTTGC+AGG | + | chr3_2:81229658-81229677 | Msa0429750:intron | 20.0% |
!!! | ATATTTATGTTGATTTTGCA+GGG | + | chr3_2:81229659-81229678 | Msa0429750:intron | 20.0% |
!! | CAAGCTTATCATTTAATAAA+TGG | + | chr3_2:81229794-81229813 | Msa0429750:three_prime_UTR | 20.0% |
! | AAAACTGATGAAGAATTTCT+TGG | - | chr3_2:81223622-81223641 | None:intergenic | 25.0% |
! | AATTCATCAAAACATCTCTT+TGG | - | chr3_2:81223658-81223677 | None:intergenic | 25.0% |
!!! | AGATTTTTTTCCTACTACAA+TGG | + | chr3_2:81224484-81224503 | Msa0429750:CDS | 25.0% |
!!! | GATTTTTTTCCTACTACAAT+GGG | + | chr3_2:81224485-81224504 | Msa0429750:CDS | 25.0% |
! | TAAAACTTGAATCTTCAGAT+TGG | - | chr3_2:81224520-81224539 | None:intergenic | 25.0% |
!! | ATCCATCATTTTCTGTATTT+TGG | - | chr3_2:81224687-81224706 | None:intergenic | 25.0% |
! | TTATTCCATTGATCAAAACT+TGG | - | chr3_2:81224740-81224759 | None:intergenic | 25.0% |
!!! | AGTTTTGATCAATGGAATAA+TGG | + | chr3_2:81224740-81224759 | Msa0429750:CDS | 25.0% |
!!! | GTTTTGATCAATGGAATAAT+GGG | + | chr3_2:81224741-81224760 | Msa0429750:CDS | 25.0% |
!! | AAATCCAATTTTTCATTCTG+CGG | + | chr3_2:81224862-81224881 | Msa0429750:CDS | 25.0% |
! | AAATGTATCAACCATTACAT+TGG | - | chr3_2:81224906-81224925 | None:intergenic | 25.0% |
!! | AATGTAATGGTTGATACATT+TGG | + | chr3_2:81224905-81224924 | Msa0429750:CDS | 25.0% |
! | CATCAATTGTAATAAGTTCT+GGG | - | chr3_2:81225369-81225388 | None:intergenic | 25.0% |
! | AAATCAATGGAAATTGACAT+TGG | + | chr3_2:81225526-81225545 | Msa0429750:CDS | 25.0% |
! | AATCAATGGAAATTGACATT+GGG | + | chr3_2:81225527-81225546 | Msa0429750:CDS | 25.0% |
! | ACATATTAATAGTCTCAGAA+AGG | + | chr3_2:81225765-81225784 | Msa0429750:CDS | 25.0% |
!! | ATGGTTCTTCTTTTAATCTT+TGG | + | chr3_2:81225917-81225936 | Msa0429750:intron | 25.0% |
! | TTTCTGTAGAAAAGAAGAAT+TGG | + | chr3_2:81226209-81226228 | Msa0429750:CDS | 25.0% |
! | AATGCAATAAATGCAAAAGA+TGG | + | chr3_2:81226454-81226473 | Msa0429750:CDS | 25.0% |
!! | CATTTTCAATTTCTTTTGAG+CGG | - | chr3_2:81226554-81226573 | None:intergenic | 25.0% |
!! | TACAATTTTGCAGTAATTCA+TGG | - | chr3_2:81226933-81226952 | None:intergenic | 25.0% |
! | ATGAATTACTGCAAAATTGT+AGG | + | chr3_2:81226932-81226951 | Msa0429750:intron | 25.0% |
!! | AGATTTAATAGAAGTTTGCT+TGG | + | chr3_2:81227195-81227214 | Msa0429750:intron | 25.0% |
!!! | GCTCATTTTATTAGTTCTAT+TGG | - | chr3_2:81227455-81227474 | None:intergenic | 25.0% |
! | TTTCTTTCTTATCATCAGAT+TGG | + | chr3_2:81227515-81227534 | Msa0429750:intron | 25.0% |
!!! | CCCTTTTTTTACAAAAATCA+AGG | - | chr3_2:81227544-81227563 | None:intergenic | 25.0% |
! | AAAACAAAGGAGATAAAAGT+AGG | - | chr3_2:81227772-81227791 | None:intergenic | 25.0% |
! | CATTATAAATATTCAGTGGT+TGG | - | chr3_2:81227810-81227829 | None:intergenic | 25.0% |
! | ACTGAAGAAAATATTGTTGT+TGG | + | chr3_2:81227868-81227887 | Msa0429750:CDS | 25.0% |
! | AAAGAAATGATCATATACGT+TGG | - | chr3_2:81227899-81227918 | None:intergenic | 25.0% |
! | TAAATGTACAACACTACAAA+TGG | - | chr3_2:81228187-81228206 | None:intergenic | 25.0% |
! | AATTATACAATGTCATTCGA+TGG | + | chr3_2:81228211-81228230 | Msa0429750:intron | 25.0% |
! | ATTATACAATGTCATTCGAT+GGG | + | chr3_2:81228212-81228231 | Msa0429750:intron | 25.0% |
!!! | TATGTATTCATTTTAAAGGG+AGG | - | chr3_2:81228537-81228556 | None:intergenic | 25.0% |
! | TATTCAGTGCACAATAATTA+AGG | + | chr3_2:81228574-81228593 | Msa0429750:intron | 25.0% |
!!! | ATATGAAAAACTTCTGGTTT+AGG | - | chr3_2:81228700-81228719 | None:intergenic | 25.0% |
! | AGAATCATATGAAAAACTTC+TGG | - | chr3_2:81228706-81228725 | None:intergenic | 25.0% |
! | TTTCAAATAATCTACTCTCA+AGG | - | chr3_2:81228824-81228843 | None:intergenic | 25.0% |
! | GTAATGAAAACAACAAATCT+GGG | - | chr3_2:81229218-81229237 | None:intergenic | 25.0% |
! | AGTAATGAAAACAACAAATC+TGG | - | chr3_2:81229219-81229238 | None:intergenic | 25.0% |
GATGAATTAAGCAATCAAGT+AGG | + | chr3_2:81223670-81223689 | Msa0429750:CDS | 30.0% | |
AAATGGTATACAACCGTAAT+TGG | + | chr3_2:81223722-81223741 | Msa0429750:CDS | 30.0% | |
CTTGCATTTGATACTCTTAT+TGG | - | chr3_2:81223994-81224013 | None:intergenic | 30.0% | |
! | TGTTTTTCTACAAATTTGGC+AGG | + | chr3_2:81224039-81224058 | Msa0429750:intron | 30.0% |
TAACCAGTATTATAGGACTT+AGG | - | chr3_2:81224121-81224140 | None:intergenic | 30.0% | |
! | TCCTATAATACTGGTTACTA+TGG | + | chr3_2:81224124-81224143 | Msa0429750:CDS | 30.0% |
! | TGTAACTTACCTGTTTCTTA+TGG | + | chr3_2:81224250-81224269 | Msa0429750:CDS | 30.0% |
CAAAGAAAGATTCGAAATTG+AGG | - | chr3_2:81224371-81224390 | None:intergenic | 30.0% | |
ATTAACAACATGTCTAACAG+TGG | - | chr3_2:81224624-81224643 | None:intergenic | 30.0% | |
TGGATTCAGTATTATCAGAA+GGG | - | chr3_2:81224652-81224671 | None:intergenic | 30.0% | |
ATGGATTCAGTATTATCAGA+AGG | - | chr3_2:81224653-81224672 | None:intergenic | 30.0% | |
!!! | ATCATTTTCTGTATTTTGGC+AGG | - | chr3_2:81224683-81224702 | None:intergenic | 30.0% |
TGCCAAAATACAGAAAATGA+TGG | + | chr3_2:81224682-81224701 | Msa0429750:CDS | 30.0% | |
!! | ATACAGAAAATGATGGATTC+AGG | + | chr3_2:81224689-81224708 | Msa0429750:CDS | 30.0% |
!!! | AAAATGATGGATTCAGGTTT+TGG | + | chr3_2:81224695-81224714 | Msa0429750:CDS | 30.0% |
! | AATTCTGAATGTTGCACTTT+TGG | - | chr3_2:81224797-81224816 | None:intergenic | 30.0% |
! | AATCCAATTTTTCATTCTGC+GGG | + | chr3_2:81224863-81224882 | Msa0429750:CDS | 30.0% |
TTGATCAAATGTTAGCTCAT+CGG | - | chr3_2:81225161-81225180 | None:intergenic | 30.0% | |
CCATCAATTGTAATAAGTTC+TGG | - | chr3_2:81225370-81225389 | None:intergenic | 30.0% | |
CCAGAACTTATTACAATTGA+TGG | + | chr3_2:81225367-81225386 | Msa0429750:CDS | 30.0% | |
! | TTCTTCTCTTGATCAACTTT+TGG | - | chr3_2:81225472-81225491 | None:intergenic | 30.0% |
TAAAATTGGATTCAACCAAG+AGG | + | chr3_2:81225618-81225637 | Msa0429750:CDS | 30.0% | |
AAAATTGGATTCAACCAAGA+GGG | + | chr3_2:81225619-81225638 | Msa0429750:CDS | 30.0% | |
ATGTGTGAACAAATCAATCA+AGG | - | chr3_2:81225731-81225750 | None:intergenic | 30.0% | |
ACCAAATAGCTTAACTTTCT+GGG | - | chr3_2:81225885-81225904 | None:intergenic | 30.0% | |
AACCAAATAGCTTAACTTTC+TGG | - | chr3_2:81225886-81225905 | None:intergenic | 30.0% | |
ATTTGGTTAAAGCTCATGAA+TGG | + | chr3_2:81225898-81225917 | Msa0429750:intron | 30.0% | |
TTTAACACAGATTACTTCTG+AGG | + | chr3_2:81226074-81226093 | Msa0429750:intron | 30.0% | |
!! | GCTTTTTCCTTTCACATAAT+TGG | - | chr3_2:81226128-81226147 | None:intergenic | 30.0% |
AAAAGAAGAATTGGATGTAC+AGG | + | chr3_2:81226218-81226237 | Msa0429750:CDS | 30.0% | |
AAAGAAGAATTGGATGTACA+GGG | + | chr3_2:81226219-81226238 | Msa0429750:CDS | 30.0% | |
! | TTTAGAAGTCTTGTAACACA+TGG | - | chr3_2:81226256-81226275 | None:intergenic | 30.0% |
ATGTGTTACAAGACTTCTAA+AGG | + | chr3_2:81226255-81226274 | Msa0429750:CDS | 30.0% | |
CGATTACTTTATAATTCAGC+TGG | + | chr3_2:81226374-81226393 | Msa0429750:intron | 30.0% | |
CGCTCAAAAGAAATTGAAAA+TGG | + | chr3_2:81226552-81226571 | Msa0429750:CDS | 30.0% | |
!!! | CAAGAAGTCTTTTTTCTAAG+TGG | - | chr3_2:81226647-81226666 | None:intergenic | 30.0% |
! | CTATTTTCAGTTTACATGCT+AGG | - | chr3_2:81226798-81226817 | None:intergenic | 30.0% |
ATCTATAAGAGAATTCAGCA+GGG | - | chr3_2:81227058-81227077 | None:intergenic | 30.0% | |
! | TTTAGTTCAGAAGAAGCAAT+AGG | - | chr3_2:81227133-81227152 | None:intergenic | 30.0% |
GATGTCTATTCTAATATGTC+TGG | + | chr3_2:81227161-81227180 | Msa0429750:intron | 30.0% | |
! | AGTATTTTATGCCTGAAAGA+AGG | + | chr3_2:81227354-81227373 | Msa0429750:CDS | 30.0% |
AGACTATGAAAAGATGTTGA+AGG | + | chr3_2:81228038-81228057 | Msa0429750:CDS | 30.0% | |
!! | ATGGTCTTTAAAGCTCTATT+TGG | - | chr3_2:81228072-81228091 | None:intergenic | 30.0% |
!! | AAATAGAGCTTTAAAGACCA+TGG | + | chr3_2:81228071-81228090 | Msa0429750:CDS | 30.0% |
!! | AATAGAGCTTTAAAGACCAT+GGG | + | chr3_2:81228072-81228091 | Msa0429750:CDS | 30.0% |
!! | ATTAGGTTGGCCAAAATATA+TGG | + | chr3_2:81228350-81228369 | Msa0429750:intron | 30.0% |
! | GCACAATAATTAAGGCTTTT+TGG | + | chr3_2:81228582-81228601 | Msa0429750:intron | 30.0% |
! | TCATTATGTTTAGTGTTGGA+GGG | - | chr3_2:81228795-81228814 | None:intergenic | 30.0% |
! | ATCATTATGTTTAGTGTTGG+AGG | - | chr3_2:81228796-81228815 | None:intergenic | 30.0% |
TGATTCCCAGATTGATATAT+CGG | - | chr3_2:81229161-81229180 | None:intergenic | 30.0% | |
! | TCTTGATTTGAGAACAGTTT+GGG | - | chr3_2:81229362-81229381 | None:intergenic | 30.0% |
! | TTCTTGATTTGAGAACAGTT+TGG | - | chr3_2:81229363-81229382 | None:intergenic | 30.0% |
CAAAATCTCTCAAATTCTCT+AGG | - | chr3_2:81229545-81229564 | None:intergenic | 30.0% | |
! | CTAGAGAATTTGAGAGATTT+TGG | + | chr3_2:81229543-81229562 | Msa0429750:intron | 30.0% |
!! | TACTTTCTGACTTGTTCTTT+GGG | + | chr3_2:81229572-81229591 | Msa0429750:intron | 30.0% |
!!! | GACTACCAAGTCATTTTTTA+TGG | + | chr3_2:81229594-81229613 | Msa0429750:intron | 30.0% |
CACAAAGATTCATTGATCAA+CGG | - | chr3_2:81229741-81229760 | None:intergenic | 30.0% | |
TCATCAAAACATCTCTTTGG+CGG | - | chr3_2:81223655-81223674 | None:intergenic | 35.0% | |
TTACGGTTGTATACCATTTC+AGG | - | chr3_2:81223721-81223740 | None:intergenic | 35.0% | |
ATCATTCAGAATGAGCAACT+TGG | + | chr3_2:81223866-81223885 | Msa0429750:CDS | 35.0% | |
TCATTCAGAATGAGCAACTT+GGG | + | chr3_2:81223867-81223886 | Msa0429750:CDS | 35.0% | |
! | TTTTCTACAAATTTGGCAGG+AGG | + | chr3_2:81224042-81224061 | Msa0429750:intron | 35.0% |
GTTCCTAAGTCCTATAATAC+TGG | + | chr3_2:81224115-81224134 | Msa0429750:CDS | 35.0% | |
GCCATAGTAACCAGTATTAT+AGG | - | chr3_2:81224128-81224147 | None:intergenic | 35.0% | |
! | AACTTACCTGTTTCTTATGG+TGG | + | chr3_2:81224253-81224272 | Msa0429750:CDS | 35.0% |
GTTGCTAATTGATCTGATGT+TGG | - | chr3_2:81224293-81224312 | None:intergenic | 35.0% | |
ACATACAGTTATTTGCGTGT+TGG | - | chr3_2:81224327-81224346 | None:intergenic | 35.0% | |
ACTTGAATCTTCAGATTGGA+GGG | - | chr3_2:81224516-81224535 | None:intergenic | 35.0% | |
AACTTGAATCTTCAGATTGG+AGG | - | chr3_2:81224517-81224536 | None:intergenic | 35.0% | |
! | TTCTGAAAATCCAACTTCTG+TGG | - | chr3_2:81224596-81224615 | None:intergenic | 35.0% |
!! | ACCATCCAAGTTTTGATCAA+TGG | + | chr3_2:81224732-81224751 | Msa0429750:CDS | 35.0% |
TCCATTGATCAAAACTTGGA+TGG | - | chr3_2:81224736-81224755 | None:intergenic | 35.0% | |
! | TGATCAATGGAATAATGGGA+TGG | + | chr3_2:81224745-81224764 | Msa0429750:CDS | 35.0% |
GGATGTGGTTGAAAAGAATA+AGG | - | chr3_2:81224776-81224795 | None:intergenic | 35.0% | |
TCTCCATTATGAGAGTAATG+TGG | + | chr3_2:81224829-81224848 | Msa0429750:CDS | 35.0% | |
GTTCCACATTACTCTCATAA+TGG | - | chr3_2:81224835-81224854 | None:intergenic | 35.0% | |
ATGGATCCTATTCCTACTAA+TGG | + | chr3_2:81225019-81225038 | Msa0429750:CDS | 35.0% | |
TGTATATCCTCTCCATTAGT+AGG | - | chr3_2:81225034-81225053 | None:intergenic | 35.0% | |
ACTAATGGAGAGGATATACA+AGG | + | chr3_2:81225034-81225053 | Msa0429750:CDS | 35.0% | |
GTCTATCATGCCATAGATTA+GGG | - | chr3_2:81225317-81225336 | None:intergenic | 35.0% | |
AGTCTATCATGCCATAGATT+AGG | - | chr3_2:81225318-81225337 | None:intergenic | 35.0% | |
AAATTGGATTCAACCAAGAG+GGG | + | chr3_2:81225620-81225639 | Msa0429750:CDS | 35.0% | |
TTTGTTTGCTTCTCTTGATC+AGG | - | chr3_2:81225679-81225698 | None:intergenic | 35.0% | |
TAATTGAAAACACTGGAAGG+TGG | - | chr3_2:81225811-81225830 | None:intergenic | 35.0% | |
ATCACGGTAATTGAAAACAC+TGG | - | chr3_2:81225818-81225837 | None:intergenic | 35.0% | |
TCAATTACCGTGATCTGTTT+AGG | + | chr3_2:81225824-81225843 | Msa0429750:intron | 35.0% | |
AGCAATACCTAAACAGATCA+CGG | - | chr3_2:81225834-81225853 | None:intergenic | 35.0% | |
TCCCAGAAAGTTAAGCTATT+TGG | + | chr3_2:81225881-81225900 | Msa0429750:intron | 35.0% | |
ACACATGCCAATTATGTGAA+AGG | + | chr3_2:81226118-81226137 | Msa0429750:CDS | 35.0% | |
CATGAACAAACAATTGGTAC+TGG | - | chr3_2:81226162-81226181 | None:intergenic | 35.0% | |
CCACAACATGAACAAACAAT+TGG | - | chr3_2:81226168-81226187 | None:intergenic | 35.0% | |
CCAATTGTTTGTTCATGTTG+TGG | + | chr3_2:81226165-81226184 | Msa0429750:CDS | 35.0% | |
! | TGTTACAAGACTTCTAAAGG+TGG | + | chr3_2:81226258-81226277 | Msa0429750:CDS | 35.0% |
! | GTTACAAGACTTCTAAAGGT+GGG | + | chr3_2:81226259-81226278 | Msa0429750:CDS | 35.0% |
GTGGGAAAATCACATTCAAT+GGG | + | chr3_2:81226277-81226296 | Msa0429750:CDS | 35.0% | |
TTCTTCAAGTACTTCATCGT+TGG | - | chr3_2:81226337-81226356 | None:intergenic | 35.0% | |
CTACAACAACAGAAGAGATT+TGG | + | chr3_2:81226497-81226516 | Msa0429750:CDS | 35.0% | |
! | TTACTGAAGGCTGCTAATTT+TGG | + | chr3_2:81226588-81226607 | Msa0429750:CDS | 35.0% |
CAAAGTGGGAAAATGTTGAA+GGG | + | chr3_2:81226688-81226707 | Msa0429750:CDS | 35.0% | |
GAAGTTTATGTGCATACATG+CGG | - | chr3_2:81226747-81226766 | None:intergenic | 35.0% | |
TTGTAGGTTATAGCTGCAAA+AGG | + | chr3_2:81226948-81226967 | Msa0429750:intron | 35.0% | |
GAAAGTGAATAAGCAGTTTC+TGG | + | chr3_2:81227010-81227029 | Msa0429750:CDS | 35.0% | |
GATCTATAAGAGAATTCAGC+AGG | - | chr3_2:81227059-81227078 | None:intergenic | 35.0% | |
TAGATCAAGAGTAAGTTCAG+TGG | + | chr3_2:81227073-81227092 | Msa0429750:intron | 35.0% | |
AAGAAGCAATAGGTGGTAAT+TGG | - | chr3_2:81227123-81227142 | None:intergenic | 35.0% | |
! | ATAGAAGTTTGCTTGGTTTC+AGG | + | chr3_2:81227202-81227221 | Msa0429750:intron | 35.0% |
! | GGAGCAGATATATGCATTTT+TGG | + | chr3_2:81227251-81227270 | Msa0429750:CDS | 35.0% |
!!! | CATTTTTGGAATGTATGTCC+AGG | + | chr3_2:81227265-81227284 | Msa0429750:CDS | 35.0% |
! | ATGTATACACAACGCTGATT+CGG | - | chr3_2:81227314-81227333 | None:intergenic | 35.0% |
CAATATCTCATGGTAAACGA+AGG | - | chr3_2:81227405-81227424 | None:intergenic | 35.0% | |
CTTCGTTTACCATGAGATAT+TGG | + | chr3_2:81227403-81227422 | Msa0429750:CDS | 35.0% | |
! | TAATCATCCCCTTTTCTTGA+AGG | - | chr3_2:81227599-81227618 | None:intergenic | 35.0% |
! | TTTTATGTGTCTGTGTGTGT+TGG | + | chr3_2:81227694-81227713 | Msa0429750:intron | 35.0% |
!!! | GGGCTAGTTTTTGAAAACAA+AGG | - | chr3_2:81227785-81227804 | None:intergenic | 35.0% |
TAAATATTCAGTGGTTGGCA+GGG | - | chr3_2:81227805-81227824 | None:intergenic | 35.0% | |
ATAAATATTCAGTGGTTGGC+AGG | - | chr3_2:81227806-81227825 | None:intergenic | 35.0% | |
!!! | ACACTCTTTTTCAATGGTCT+TGG | - | chr3_2:81228013-81228032 | None:intergenic | 35.0% |
AAGACCATTGAAAAAGAGTG+TGG | + | chr3_2:81228012-81228031 | Msa0429750:CDS | 35.0% | |
TCGCATCACTAAAATGTCTT+TGG | - | chr3_2:81228124-81228143 | None:intergenic | 35.0% | |
CACTACAAATGGAAAAAACG+TGG | - | chr3_2:81228176-81228195 | None:intergenic | 35.0% | |
ATTGGGGGGAATAAAAGAAA+AGG | - | chr3_2:81228326-81228345 | None:intergenic | 35.0% | |
TATTCCCCCCAATTTCTATT+AGG | + | chr3_2:81228333-81228352 | Msa0429750:intron | 35.0% | |
TGGCCAACCTAATAGAAATT+GGG | - | chr3_2:81228343-81228362 | None:intergenic | 35.0% | |
TTGGCCAACCTAATAGAAAT+TGG | - | chr3_2:81228344-81228363 | None:intergenic | 35.0% | |
CATATTGCAAGTGAGCTATA+AGG | - | chr3_2:81228393-81228412 | None:intergenic | 35.0% | |
! | TTGAACTGTGTTCCATTTTC+AGG | + | chr3_2:81228752-81228771 | Msa0429750:intron | 35.0% |
! | CATTATGTTTAGTGTTGGAG+GGG | - | chr3_2:81228794-81228813 | None:intergenic | 35.0% |
TTTACAACAGTCATCAGAGT+AGG | - | chr3_2:81228951-81228970 | None:intergenic | 35.0% | |
ACAATGTATTCCAAAAGAGC+TGG | + | chr3_2:81228994-81229013 | Msa0429750:CDS | 35.0% | |
TTTGAGTCAACTTGTGTTCA+TGG | - | chr3_2:81229085-81229104 | None:intergenic | 35.0% | |
TCAAGACCGATATATCAATC+TGG | + | chr3_2:81229152-81229171 | Msa0429750:CDS | 35.0% | |
CAAGACCGATATATCAATCT+GGG | + | chr3_2:81229153-81229172 | Msa0429750:CDS | 35.0% | |
GATATATCAATCTGGGAATC+AGG | + | chr3_2:81229160-81229179 | Msa0429750:CDS | 35.0% | |
TCAGGAGTCAAATGAGAAAA+TGG | + | chr3_2:81229178-81229197 | Msa0429750:CDS | 35.0% | |
! | ACCATATCTTTTTACACTGC+TGG | - | chr3_2:81229434-81229453 | None:intergenic | 35.0% |
!! | CTACTTTCTGACTTGTTCTT+TGG | + | chr3_2:81229571-81229590 | Msa0429750:intron | 35.0% |
GAGTTCACAGTTCAAATAGT+TGG | + | chr3_2:81229767-81229786 | Msa0429750:three_prime_UTR | 35.0% | |
! | TTTGCCAAGGGTTTTCATCT+TGG | + | chr3_2:81223574-81223593 | Msa0429750:CDS | 40.0% |
! | ACTTACCAATGCTGCTTCAA+AGG | + | chr3_2:81223910-81223929 | Msa0429750:CDS | 40.0% |
!! | ACAAACCTTTGAAGCAGCAT+TGG | - | chr3_2:81223918-81223937 | None:intergenic | 40.0% |
GTACTTTAATGCTCAGACAC+AGG | - | chr3_2:81223948-81223967 | None:intergenic | 40.0% | |
TTGCTTCCACCATAAGAAAC+AGG | - | chr3_2:81224262-81224281 | None:intergenic | 40.0% | |
! | TTCTTATGGTGGAAGCAATC+TGG | + | chr3_2:81224264-81224283 | Msa0429750:CDS | 40.0% |
GCAATATCAACCACAGAAGT+TGG | + | chr3_2:81224583-81224602 | Msa0429750:CDS | 40.0% | |
!!! | TATTTTGGCAGGTCGTAGTA+TGG | - | chr3_2:81224672-81224691 | None:intergenic | 40.0% |
! | GAATGTTGCACTTTTGGATG+TGG | - | chr3_2:81224791-81224810 | None:intergenic | 40.0% |
! | TCATAATGGAGAGAAGAGAG+GGG | - | chr3_2:81224821-81224840 | None:intergenic | 40.0% |
! | CTCATAATGGAGAGAAGAGA+GGG | - | chr3_2:81224822-81224841 | None:intergenic | 40.0% |
! | TCTCATAATGGAGAGAAGAG+AGG | - | chr3_2:81224823-81224842 | None:intergenic | 40.0% |
ACTCCCGCAGAATGAAAAAT+TGG | - | chr3_2:81224869-81224888 | None:intergenic | 40.0% | |
! | TTTTCATTCTGCGGGAGTTA+AGG | + | chr3_2:81224871-81224890 | Msa0429750:CDS | 40.0% |
TTTCATTCTGCGGGAGTTAA+GGG | + | chr3_2:81224872-81224891 | Msa0429750:CDS | 40.0% | |
GGGGATAAACACCAATGTAA+TGG | + | chr3_2:81224892-81224911 | Msa0429750:CDS | 40.0% | |
TTGATACATTTGGACAGCCA+GGG | + | chr3_2:81224915-81224934 | Msa0429750:CDS | 40.0% | |
GCTTGAAAGCTATGATGTGA+TGG | + | chr3_2:81224937-81224956 | Msa0429750:CDS | 40.0% | |
TTGTCACGGGTATAAAATCC+AGG | + | chr3_2:81224981-81225000 | Msa0429750:CDS | 40.0% | |
TCCTATTCCTACTAATGGAG+AGG | + | chr3_2:81225024-81225043 | Msa0429750:CDS | 40.0% | |
TCCTCTCCATTAGTAGGAAT+AGG | - | chr3_2:81225028-81225047 | None:intergenic | 40.0% | |
GGCAGAACTAAATTTGACCA+CGG | + | chr3_2:81225055-81225074 | Msa0429750:CDS | 40.0% | |
TGGAATTTAATCTGATGCCG+TGG | - | chr3_2:81225075-81225094 | None:intergenic | 40.0% | |
!!! | TAGCTCATCGGCTTTCTTTT+TGG | - | chr3_2:81225149-81225168 | None:intergenic | 40.0% |
TCCTCAGTTACAACTGTTAG+TGG | + | chr3_2:81225196-81225215 | Msa0429750:CDS | 40.0% | |
CCTCAGTTACAACTGTTAGT+GGG | + | chr3_2:81225197-81225216 | Msa0429750:CDS | 40.0% | |
ATGCCATAGATTAGGGAATC+TGG | - | chr3_2:81225310-81225329 | None:intergenic | 40.0% | |
GATCAACTTCCACTGAGTTT+CGG | - | chr3_2:81225342-81225361 | None:intergenic | 40.0% | |
! | TGATGGTGATGATGATGAAG+AGG | + | chr3_2:81225384-81225403 | Msa0429750:CDS | 40.0% |
GATGATGAAGAGGACATACA+AGG | + | chr3_2:81225394-81225413 | Msa0429750:CDS | 40.0% | |
GAGGACATACAAGGAAGAAT+TGG | + | chr3_2:81225403-81225422 | Msa0429750:CDS | 40.0% | |
AAGAATTGGATTCAACCACG+AGG | + | chr3_2:81225417-81225436 | Msa0429750:CDS | 40.0% | |
AGAATTGGATTCAACCACGA+GGG | + | chr3_2:81225418-81225437 | Msa0429750:CDS | 40.0% | |
GACAGACAGTTGCAAATCAA+TGG | + | chr3_2:81225513-81225532 | Msa0429750:CDS | 40.0% | |
TTGATCAGGTGTTAGTTCAC+TGG | - | chr3_2:81225665-81225684 | None:intergenic | 40.0% | |
TCTCAGAAAGGAATCTGTTC+TGG | + | chr3_2:81225777-81225796 | Msa0429750:intron | 40.0% | |
CGGTAATTGAAAACACTGGA+AGG | - | chr3_2:81225814-81225833 | None:intergenic | 40.0% | |
!! | GCTTAACTTTCTGGGATAGT+TGG | - | chr3_2:81225877-81225896 | None:intergenic | 40.0% |
! | AACACAGATTACTTCTGAGG+AGG | + | chr3_2:81226077-81226096 | Msa0429750:intron | 40.0% |
GGTGGGAAAATCACATTCAA+TGG | + | chr3_2:81226276-81226295 | Msa0429750:CDS | 40.0% | |
! | CGATGAAGTACTTGAAGAAC+CGG | + | chr3_2:81226338-81226357 | Msa0429750:CDS | 40.0% |
ACACAACAGTCGTAAAGAGT+TGG | - | chr3_2:81226419-81226438 | None:intergenic | 40.0% | |
GACTGTTGTGTTCTTCTAGT+GGG | + | chr3_2:81226428-81226447 | Msa0429750:intron | 40.0% | |
! | ATTTCTTTTGAGCGGCATAC+AGG | - | chr3_2:81226546-81226565 | None:intergenic | 40.0% |
AAAGCATGCTCACTTACTGA+AGG | + | chr3_2:81226575-81226594 | Msa0429750:CDS | 40.0% | |
TTCTAAGTGGTCACTTAGCA+CGG | - | chr3_2:81226634-81226653 | None:intergenic | 40.0% | |
GCAAAGTGGGAAAATGTTGA+AGG | + | chr3_2:81226687-81226706 | Msa0429750:CDS | 40.0% | |
AGGGAACGAGAATCTTGATA+AGG | + | chr3_2:81226707-81226726 | Msa0429750:CDS | 40.0% | |
! | GTTTCTGGATATCATTCCAG+AGG | + | chr3_2:81227025-81227044 | Msa0429750:CDS | 40.0% |
AGTTCAGAAGAAGCAATAGG+TGG | - | chr3_2:81227130-81227149 | None:intergenic | 40.0% | |
CTTCTGTTTCAGCAGATTGA+AGG | + | chr3_2:81227230-81227249 | Msa0429750:CDS | 40.0% | |
! | ATGGTAAACGAAGGTACGAA+GGG | - | chr3_2:81227396-81227415 | None:intergenic | 40.0% |
! | TTCGGAGTCTTTTGCTCTTT+GGG | - | chr3_2:81227638-81227657 | None:intergenic | 40.0% |
AAGAGAAAGAAACTGACCAC+CGG | - | chr3_2:81227676-81227695 | None:intergenic | 40.0% | |
TTCTTTGTTGCTGCTGAGAA+AGG | + | chr3_2:81227913-81227932 | Msa0429750:CDS | 40.0% | |
TCTTTGTTGCTGCTGAGAAA+GGG | + | chr3_2:81227914-81227933 | Msa0429750:CDS | 40.0% | |
TCTCGTTTGCCATACTTTGA+TGG | + | chr3_2:81227955-81227974 | Msa0429750:CDS | 40.0% | |
! | ACCATTGAAAAAGAGTGTGG+AGG | + | chr3_2:81228015-81228034 | Msa0429750:CDS | 40.0% |
!!! | TCCTCCACACTCTTTTTCAA+TGG | - | chr3_2:81228019-81228038 | None:intergenic | 40.0% |
AATGTCTTTGGCAGTGTCTT+TGG | - | chr3_2:81228112-81228131 | None:intergenic | 40.0% | |
ACGTGGATGAAAGTAAGACA+AGG | - | chr3_2:81228159-81228178 | None:intergenic | 40.0% | |
CCAACCTAATAGAAATTGGG+GGG | - | chr3_2:81228340-81228359 | None:intergenic | 40.0% | |
GCCAACCTAATAGAAATTGG+GGG | - | chr3_2:81228341-81228360 | None:intergenic | 40.0% | |
GGCCAACCTAATAGAAATTG+GGG | - | chr3_2:81228342-81228361 | None:intergenic | 40.0% | |
CCAAAATATATGGCCTACCA+GGG | + | chr3_2:81228360-81228379 | Msa0429750:CDS | 40.0% | |
! | ATAAGGAAGTTTTCCCTGGT+AGG | - | chr3_2:81228376-81228395 | None:intergenic | 40.0% |
! | AGCTATAAGGAAGTTTTCCC+TGG | - | chr3_2:81228380-81228399 | None:intergenic | 40.0% |
!! | ATGGTTTTGCACTGAATGCA+AGG | + | chr3_2:81228453-81228472 | Msa0429750:CDS | 40.0% |
CACTGAATGCAAGGAAATTC+AGG | + | chr3_2:81228462-81228481 | Msa0429750:CDS | 40.0% | |
CAAACTGAAACTGAGACTTC+TGG | - | chr3_2:81228872-81228891 | None:intergenic | 40.0% | |
TAGGATTGTGTAGATGGTAG+AGG | - | chr3_2:81228932-81228951 | None:intergenic | 40.0% | |
TCAGAGTAGGATTGTGTAGA+TGG | - | chr3_2:81228938-81228957 | None:intergenic | 40.0% | |
! | TCTCACATTTCCAGCTCTTT+TGG | - | chr3_2:81229007-81229026 | None:intergenic | 40.0% |
CTTATAGCATGCAGAGCAAA+TGG | - | chr3_2:81229045-81229064 | None:intergenic | 40.0% | |
CATTTGCTCTGCATGCTATA+AGG | + | chr3_2:81229043-81229062 | Msa0429750:CDS | 40.0% | |
TCTGCATGCTATAAGGATAG+AGG | + | chr3_2:81229050-81229069 | Msa0429750:CDS | 40.0% | |
TTCACCATCTGTGTGTAAGT+CGG | - | chr3_2:81229276-81229295 | None:intergenic | 40.0% | |
GCCAGCAGTGTAAAAAGATA+TGG | + | chr3_2:81229430-81229449 | Msa0429750:CDS | 40.0% | |
! | TTATACTTGCTGCTCACTCT+AGG | + | chr3_2:81229454-81229473 | Msa0429750:CDS | 40.0% |
! | CTCTAGGAATTGCAAAGACT+TGG | + | chr3_2:81229470-81229489 | Msa0429750:CDS | 40.0% |
! | CCAAGGGTTTTCATCTTGGT+GGG | + | chr3_2:81223578-81223597 | Msa0429750:CDS | 45.0% |
!! | TTCATCTTGGTGGGAGTACT+TGG | + | chr3_2:81223587-81223606 | Msa0429750:CDS | 45.0% |
AAGTAGGATTCTCCTCAGAC+TGG | + | chr3_2:81223686-81223705 | Msa0429750:CDS | 45.0% | |
AGTAGCAATATTTCCAGCGC+AGG | - | chr3_2:81223893-81223912 | None:intergenic | 45.0% | |
TTAATGCTCAGACACAGGTC+AGG | - | chr3_2:81223943-81223962 | None:intergenic | 45.0% | |
GCAGGAGGAATATATGAACC+TGG | + | chr3_2:81224057-81224076 | Msa0429750:intron | 45.0% | |
GGCAGGTTATGAGCAATAGA+AGG | - | chr3_2:81224175-81224194 | None:intergenic | 45.0% | |
!!! | CATAACCTGCCTTGTTTTCC+TGG | + | chr3_2:81224184-81224203 | Msa0429750:CDS | 45.0% |
GAACCATCACCAGGAAAACA+AGG | - | chr3_2:81224196-81224215 | None:intergenic | 45.0% | |
TATCCCTCCAGTTGCTGATA+TGG | + | chr3_2:81224219-81224238 | Msa0429750:CDS | 45.0% | |
CATCCATATCAGCAACTGGA+GGG | - | chr3_2:81224225-81224244 | None:intergenic | 45.0% | |
ACATCCATATCAGCAACTGG+AGG | - | chr3_2:81224226-81224245 | None:intergenic | 45.0% | |
AGCACATCCATATCAGCAAC+TGG | - | chr3_2:81224229-81224248 | None:intergenic | 45.0% | |
ATCTCCACTGCAAAAAGCAG+AGG | - | chr3_2:81224446-81224465 | None:intergenic | 45.0% | |
!!! | TCTGCTTTTTGCAGTGGAGA+TGG | + | chr3_2:81224445-81224464 | Msa0429750:intron | 45.0% |
AGGGATCTTCCCATTGTAGT+AGG | - | chr3_2:81224497-81224516 | None:intergenic | 45.0% | |
TATGTCCTCTCAATCTGCCT+CGG | + | chr3_2:81224538-81224557 | Msa0429750:CDS | 45.0% | |
ATCTGCCTCGGTGAATACTT+CGG | + | chr3_2:81224550-81224569 | Msa0429750:CDS | 45.0% | |
! | ATCTTCCGAAGTATTCACCG+AGG | - | chr3_2:81224558-81224577 | None:intergenic | 45.0% |
TTCATTCTGCGGGAGTTAAG+GGG | + | chr3_2:81224873-81224892 | Msa0429750:CDS | 45.0% | |
GTTGATACATTTGGACAGCC+AGG | + | chr3_2:81224914-81224933 | Msa0429750:CDS | 45.0% | |
ACATCATAGCTTTCAAGCCC+TGG | - | chr3_2:81224935-81224954 | None:intergenic | 45.0% | |
AGCCTATTCCTACTGCATTC+TGG | + | chr3_2:81225116-81225135 | Msa0429750:CDS | 45.0% | |
GTCCAGAATGCAGTAGGAAT+AGG | - | chr3_2:81225121-81225140 | None:intergenic | 45.0% | |
GCATTTGTCCAGAATGCAGT+AGG | - | chr3_2:81225127-81225146 | None:intergenic | 45.0% | |
CCCACTAACAGTTGTAACTG+AGG | - | chr3_2:81225200-81225219 | None:intergenic | 45.0% | |
CCTTTCGAGGGAATCAGTTT+AGG | - | chr3_2:81225259-81225278 | None:intergenic | 45.0% | |
! | CCTAAACTGATTCCCTCGAA+AGG | + | chr3_2:81225256-81225275 | Msa0429750:CDS | 45.0% |
GAGCCAGATTCCCTAATCTA+TGG | + | chr3_2:81225304-81225323 | Msa0429750:CDS | 45.0% | |
GAATTGGATTCAACCACGAG+GGG | + | chr3_2:81225419-81225438 | Msa0429750:CDS | 45.0% | |
TATGCCTGCTCTCATAAGCA+AGG | + | chr3_2:81225561-81225580 | Msa0429750:CDS | 45.0% | |
! | ATTACTTCTGAGGAGGAAGC+AGG | + | chr3_2:81226084-81226103 | Msa0429750:CDS | 45.0% |
! | TTACTTCTGAGGAGGAAGCA+GGG | + | chr3_2:81226085-81226104 | Msa0429750:CDS | 45.0% |
CGACTGTTGTGTTCTTCTAG+TGG | + | chr3_2:81226427-81226446 | Msa0429750:intron | 45.0% | |
TGTTGTGTTCTTCTAGTGGG+TGG | + | chr3_2:81226431-81226450 | Msa0429750:intron | 45.0% | |
!!! | GGCTGCTAATTTTGGTGCTA+AGG | + | chr3_2:81226596-81226615 | Msa0429750:CDS | 45.0% |
TCATGCAAGAGAGAGCAAAG+TGG | + | chr3_2:81226673-81226692 | Msa0429750:CDS | 45.0% | |
CATGCAAGAGAGAGCAAAGT+GGG | + | chr3_2:81226674-81226693 | Msa0429750:CDS | 45.0% | |
GTGCATACATGCGGATTTCT+CGG | - | chr3_2:81226738-81226757 | None:intergenic | 45.0% | |
GGAATGTATGTCCAGGAGTT+TGG | + | chr3_2:81227272-81227291 | Msa0429750:CDS | 45.0% | |
CCACTCTTTGTCCTTCTTTC+AGG | - | chr3_2:81227368-81227387 | None:intergenic | 45.0% | |
CCTGAAAGAAGGACAAAGAG+TGG | + | chr3_2:81227365-81227384 | Msa0429750:CDS | 45.0% | |
! | CATGGTAAACGAAGGTACGA+AGG | - | chr3_2:81227397-81227416 | None:intergenic | 45.0% |
CCTGTGCTCCTTCAAGAAAA+GGG | + | chr3_2:81227588-81227607 | Msa0429750:CDS | 45.0% | |
CTGTGCTCCTTCAAGAAAAG+GGG | + | chr3_2:81227589-81227608 | Msa0429750:CDS | 45.0% | |
! | TCGGAGTCTTTTGCTCTTTG+GGG | - | chr3_2:81227637-81227656 | None:intergenic | 45.0% |
! | CTTCGGAGTCTTTTGCTCTT+TGG | - | chr3_2:81227639-81227658 | None:intergenic | 45.0% |
CGGCGTAGCTTATCATTCTT+CGG | - | chr3_2:81227656-81227675 | None:intergenic | 45.0% | |
CGAAGAATGATAAGCTACGC+CGG | + | chr3_2:81227654-81227673 | Msa0429750:CDS | 45.0% | |
CTTTGTTGCTGCTGAGAAAG+GGG | + | chr3_2:81227915-81227934 | Msa0429750:CDS | 45.0% | |
CAGCAGTCTCCATCAAAGTA+TGG | - | chr3_2:81227967-81227986 | None:intergenic | 45.0% | |
CATACTTTGATGGAGACTGC+TGG | + | chr3_2:81227965-81227984 | Msa0429750:CDS | 45.0% | |
TCTTTGGCAGTGTCTTTGGA+AGG | - | chr3_2:81228108-81228127 | None:intergenic | 45.0% | |
CCCCCCAATTTCTATTAGGT+TGG | + | chr3_2:81228337-81228356 | Msa0429750:intron | 45.0% | |
GCCAAAATATATGGCCTACC+AGG | + | chr3_2:81228359-81228378 | Msa0429750:CDS | 45.0% | |
! | CCCTGGTAGGCCATATATTT+TGG | - | chr3_2:81228363-81228382 | None:intergenic | 45.0% |
TCCCAGACACTATCACTTCA+CGG | - | chr3_2:81228429-81228448 | None:intergenic | 45.0% | |
! | AGGAAATTCAGGAGTGCGAA+AGG | + | chr3_2:81228473-81228492 | Msa0429750:CDS | 45.0% |
GCAACTCGCCATTCTTTGAA+GGG | - | chr3_2:81228656-81228675 | None:intergenic | 45.0% | |
TGCAACTCGCCATTCTTTGA+AGG | - | chr3_2:81228657-81228676 | None:intergenic | 45.0% | |
CGAGTTGCATACACTTTGTC+AGG | + | chr3_2:81228668-81228687 | Msa0429750:CDS | 45.0% | |
CATCAACAACGGCCTGAAAA+TGG | - | chr3_2:81228767-81228786 | None:intergenic | 45.0% | |
GGAGGGGATATCATCAACAA+CGG | - | chr3_2:81228778-81228797 | None:intergenic | 45.0% | |
TGCCAAGTATTCCTCGATGA+TGG | + | chr3_2:81228905-81228924 | Msa0429750:CDS | 45.0% | |
GACCATCATCGAGGAATACT+TGG | - | chr3_2:81228910-81228929 | None:intergenic | 45.0% | |
AAGGTTCAGCATTAGCTGCA+CGG | - | chr3_2:81229332-81229351 | None:intergenic | 45.0% | |
GGTGCGAAATTCGAGTGAAT+CGG | + | chr3_2:81229403-81229422 | Msa0429750:CDS | 45.0% | |
GTGCGAAATTCGAGTGAATC+GGG | + | chr3_2:81229404-81229423 | Msa0429750:CDS | 45.0% | |
TGCGAAATTCGAGTGAATCG+GGG | + | chr3_2:81229405-81229424 | Msa0429750:CDS | 45.0% | |
ACTTGGAGTGTAGCATTCCA+CGG | + | chr3_2:81229487-81229506 | Msa0429750:CDS | 45.0% | |
!! | TATATATATATATATATGTT+TGG | + | chr3_2:81226882-81226901 | Msa0429750:intron | 5.0% |
! | GCCAAGGGTTTTCATCTTGG+TGG | + | chr3_2:81223577-81223596 | Msa0429750:CDS | 50.0% |
CCCACCAAGATGAAAACCCT+TGG | - | chr3_2:81223581-81223600 | None:intergenic | 50.0% | |
TAGGATTCTCCTCAGACTGG+CGG | + | chr3_2:81223689-81223708 | Msa0429750:CDS | 50.0% | |
CTGGCGGTATCATCCTGAAA+TGG | + | chr3_2:81223705-81223724 | Msa0429750:CDS | 50.0% | |
!! | CACGCTGATTCAATGTCTCC+AGG | - | chr3_2:81224078-81224097 | None:intergenic | 50.0% |
TTACTATGGCGTGCCAGAAG+CGG | + | chr3_2:81224138-81224157 | Msa0429750:CDS | 50.0% | |
GGATGAGATATTCCCGCTTC+TGG | - | chr3_2:81224154-81224173 | None:intergenic | 50.0% | |
CATCACCAGGAAAACAAGGC+AGG | - | chr3_2:81224192-81224211 | None:intergenic | 50.0% | |
!!! | CTGCCTTGTTTTCCTGGTGA+TGG | + | chr3_2:81224190-81224209 | Msa0429750:CDS | 50.0% |
GGGATAGATGAACCATCACC+AGG | - | chr3_2:81224205-81224224 | None:intergenic | 50.0% | |
!!! | TCCTCCTCTGCTTTTTGCAG+TGG | + | chr3_2:81224439-81224458 | Msa0429750:intron | 50.0% |
TCCACTGCAAAAAGCAGAGG+AGG | - | chr3_2:81224443-81224462 | None:intergenic | 50.0% | |
ATTCACCGAGGCAGATTGAG+AGG | - | chr3_2:81224546-81224565 | None:intergenic | 50.0% | |
CATGTCGAGACATTGCATCC+TGG | - | chr3_2:81225002-81225021 | None:intergenic | 50.0% | |
CAGGATGCAATGTCTCGACA+TGG | + | chr3_2:81225000-81225019 | Msa0429750:CDS | 50.0% | |
CTTGGTGAGAGTAGGCATAC+TGG | - | chr3_2:81225095-81225114 | None:intergenic | 50.0% | |
CAGTATGCCTACTCTCACCA+AGG | + | chr3_2:81225093-81225112 | Msa0429750:CDS | 50.0% | |
ATAGGCTCCTTGGTGAGAGT+AGG | - | chr3_2:81225103-81225122 | None:intergenic | 50.0% | |
TGCAGTAGGAATAGGCTCCT+TGG | - | chr3_2:81225113-81225132 | None:intergenic | 50.0% | |
CCAGCTTCTAAGCCTTTCGA+GGG | - | chr3_2:81225271-81225290 | None:intergenic | 50.0% | |
ACCAGCTTCTAAGCCTTTCG+AGG | - | chr3_2:81225272-81225291 | None:intergenic | 50.0% | |
GATAGACTGCCGAAACTCAG+TGG | + | chr3_2:81225330-81225349 | Msa0429750:CDS | 50.0% | |
TGCAACTGTCTGTCACGACA+TGG | - | chr3_2:81225507-81225526 | None:intergenic | 50.0% | |
GCAACCTTGCTTATGAGAGC+AGG | - | chr3_2:81225568-81225587 | None:intergenic | 50.0% | |
CTTTAGCATCTGTCCCCTCT+TGG | - | chr3_2:81225636-81225655 | None:intergenic | 50.0% | |
TGGTCACTTAGCACGGTTCT+TGG | - | chr3_2:81226627-81226646 | None:intergenic | 50.0% | |
TCAGCAGGGTAATTCTCCTC+TGG | - | chr3_2:81227044-81227063 | None:intergenic | 50.0% | |
!! | CAGGAGTTTGGCTCTGAATG+CGG | + | chr3_2:81227284-81227303 | Msa0429750:CDS | 50.0% |
GCCTGTGCTCCTTCAAGAAA+AGG | + | chr3_2:81227587-81227606 | Msa0429750:CDS | 50.0% | |
!! | CCCTTTTCTTGAAGGAGCAC+AGG | - | chr3_2:81227591-81227610 | None:intergenic | 50.0% |
!! | GAGTCTTTTGCTCTTTGGGG+TGG | - | chr3_2:81227634-81227653 | None:intergenic | 50.0% |
AGAATGATAAGCTACGCCGG+TGG | + | chr3_2:81227657-81227676 | Msa0429750:CDS | 50.0% | |
CAAACGAGAAGCTGTCACCT+TGG | - | chr3_2:81227944-81227963 | None:intergenic | 50.0% | |
TTTGATGGAGACTGCTGGTC+TGG | + | chr3_2:81227970-81227989 | Msa0429750:CDS | 50.0% | |
! | CTGCTGGTCTGGTAATGCTA+TGG | + | chr3_2:81227981-81228000 | Msa0429750:CDS | 50.0% |
! | GGCAGTGTCTTTGGAAGGAT+TGG | - | chr3_2:81228103-81228122 | None:intergenic | 50.0% |
! | TGCCGTGAAGTGATAGTGTC+TGG | + | chr3_2:81228424-81228443 | Msa0429750:CDS | 50.0% |
! | GCCGTGAAGTGATAGTGTCT+GGG | + | chr3_2:81228425-81228444 | Msa0429750:CDS | 50.0% |
! | TGATAGTGTCTGGGAAGCGA+TGG | + | chr3_2:81228434-81228453 | Msa0429750:CDS | 50.0% |
! | AAGGGTGCGCATCAGAACTA+TGG | - | chr3_2:81228638-81228657 | None:intergenic | 50.0% |
GATGCGCACCCTTCAAAGAA+TGG | + | chr3_2:81228645-81228664 | Msa0429750:CDS | 50.0% | |
TCGAGGAATACTTGGCACGA+CGG | - | chr3_2:81228902-81228921 | None:intergenic | 50.0% | |
ATGGTAGAGGACCATCATCG+AGG | - | chr3_2:81228919-81228938 | None:intergenic | 50.0% | |
GCAGAGCAAATGGTACACTC+TGG | - | chr3_2:81229035-81229054 | None:intergenic | 50.0% | |
!! | CTTGCCGACTTACACACAGA+TGG | + | chr3_2:81229269-81229288 | Msa0429750:intron | 50.0% |
GAACAGTTTGGGTGAGAGCA+AGG | - | chr3_2:81229351-81229370 | None:intergenic | 50.0% | |
AGCTGTTCTCTCATGCCAGT+AGG | + | chr3_2:81229382-81229401 | Msa0429750:CDS | 50.0% | |
CACTCGAATTTCGCACCTAC+TGG | - | chr3_2:81229400-81229419 | None:intergenic | 50.0% | |
ATAACAACACACCTGCACCG+TGG | - | chr3_2:81229507-81229526 | None:intergenic | 50.0% | |
AGGATGATACCGCCAGTCTG+AGG | - | chr3_2:81223701-81223720 | None:intergenic | 55.0% | |
TCAGCGTGTGCAAGCTCTAC+TGG | + | chr3_2:81224090-81224109 | Msa0429750:CDS | 55.0% | |
CAGCGTGTGCAAGCTCTACT+GGG | + | chr3_2:81224091-81224110 | Msa0429750:CDS | 55.0% | |
TACTATGGCGTGCCAGAAGC+GGG | + | chr3_2:81224139-81224158 | Msa0429750:CDS | 55.0% | |
CCCTCGAAAGGCTTAGAAGC+TGG | + | chr3_2:81225268-81225287 | Msa0429750:CDS | 55.0% | |
CGCATTCAGAGCCAAACTCC+TGG | - | chr3_2:81227286-81227305 | None:intergenic | 55.0% | |
TGCTGAGAAAGGGGACTCCA+AGG | + | chr3_2:81227924-81227943 | Msa0429750:CDS | 55.0% | |
! | GGAAGGATTGGCATGTCCCA+TGG | - | chr3_2:81228091-81228110 | None:intergenic | 55.0% |
AGTGTAGCATTCCACGGTGC+AGG | + | chr3_2:81229493-81229512 | Msa0429750:CDS | 55.0% | |
CTTTAGCGTCTGTCCCCTCG+TGG | - | chr3_2:81225435-81225454 | None:intergenic | 60.0% | |
TGAGCAACTTGGGCCTGCGC+TGG | + | chr3_2:81223877-81223896 | Msa0429750:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 81223571 | 81229952 | 81223571 | ID=Msa0429750;Name=Msa0429750 |
chr3_2 | mRNA | 81223571 | 81229952 | 81223571 | ID=Msa0429750-mRNA-1;Parent=Msa0429750;Name=Msa0429750-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.64|0.6|1|1|1|15|191|1381 |
chr3_2 | exon | 81223571 | 81223758 | 81223571 | ID=Msa0429750-mRNA-1:exon:22387;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81223859 | 81223931 | 81223859 | ID=Msa0429750-mRNA-1:exon:22388;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81224061 | 81224340 | 81224061 | ID=Msa0429750-mRNA-1:exon:22389;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81224459 | 81225792 | 81224459 | ID=Msa0429750-mRNA-1:exon:22390;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81226084 | 81226359 | 81226084 | ID=Msa0429750-mRNA-1:exon:22391;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81226447 | 81226728 | 81226447 | ID=Msa0429750-mRNA-1:exon:22392;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81226954 | 81227082 | 81226954 | ID=Msa0429750-mRNA-1:exon:22393;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81227224 | 81227424 | 81227224 | ID=Msa0429750-mRNA-1:exon:22394;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81227533 | 81227678 | 81227533 | ID=Msa0429750-mRNA-1:exon:22395;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81227843 | 81228146 | 81227843 | ID=Msa0429750-mRNA-1:exon:22396;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81228355 | 81228494 | 81228355 | ID=Msa0429750-mRNA-1:exon:22397;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81228632 | 81228689 | 81228632 | ID=Msa0429750-mRNA-1:exon:22398;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81228774 | 81229199 | 81228774 | ID=Msa0429750-mRNA-1:exon:22399;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81229288 | 81229514 | 81229288 | ID=Msa0429750-mRNA-1:exon:22400;Parent=Msa0429750-mRNA-1 |
chr3_2 | exon | 81229680 | 81229952 | 81229680 | ID=Msa0429750-mRNA-1:exon:22401;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81223571 | 81223758 | 81223571 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81223859 | 81223931 | 81223859 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81224061 | 81224340 | 81224061 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81224459 | 81225792 | 81224459 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81226084 | 81226359 | 81226084 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81226447 | 81226728 | 81226447 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81226954 | 81227082 | 81226954 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81227224 | 81227424 | 81227224 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81227533 | 81227678 | 81227533 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81227843 | 81228146 | 81227843 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81228355 | 81228494 | 81228355 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81228632 | 81228689 | 81228632 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81228774 | 81229199 | 81228774 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81229288 | 81229514 | 81229288 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | CDS | 81229680 | 81229761 | 81229680 | ID=Msa0429750-mRNA-1:cds;Parent=Msa0429750-mRNA-1 |
chr3_2 | three_prime_UTR | 81229762 | 81229952 | 81229762 | ID=Msa0429750-mRNA-1:three_prime_utr;Parent=Msa0429750-mRNA-1 |
Gene Sequence |
Protein sequence |