AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0500990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0500990 MtrunA17_Chr3g0133461 95.960 1312 42 3 64 1367 16 1324 0.0 2620
Msa0500990 MtrunA17_Chr3g0138411 69.660 1058 234 16 319 1367 208 1187 0.0 1429
Msa0500990 MtrunA17_Chr3g0138411 43.368 475 180 11 1 434 1 427 2.92e-87 310
Msa0500990 MtrunA17_Chr5g0438991 69.720 928 190 12 448 1367 111 955 0.0 1251
Msa0500990 MtrunA17_Chr6g0456861 68.111 831 187 11 543 1367 2 760 0.0 1122
Msa0500990 MtrunA17_Chr6g0456861 53.968 63 22 1 19 81 7 62 1.64e-11 68.9
Msa0500990 MtrunA17_Chr4g0000031 47.909 789 373 11 593 1361 908 1678 0.0 756
Msa0500990 MtrunA17_Chr6g0456851 62.144 597 184 11 526 1085 242 833 0.0 719
Msa0500990 MtrunA17_Chr6g0456851 39.224 232 87 8 16 234 3 193 4.51e-30 129
Msa0500990 MtrunA17_Chr6g0456851 64.000 75 27 0 1127 1201 807 881 6.75e-22 102
Msa0500990 MtrunA17_Chr6g0456931 74.286 245 63 0 794 1038 1 245 7.95e-129 397
Msa0500990 MtrunA17_Chr5g0401991 59.170 289 44 6 1023 1305 1 221 2.47e-94 302
Msa0500990 MtrunA17_Chr5g0402001 89.109 101 11 0 872 972 1 101 2.08e-57 193
Msa0500990 MtrunA17_Chr1g0169961 53.191 188 53 5 501 681 9 168 6.84e-47 166
Msa0500990 MtrunA17_Chr5g0439001 69.697 99 25 2 974 1072 1 94 1.44e-36 134
Msa0500990 MtrunA17_Chr6g0456911 87.273 55 7 0 1139 1193 6 60 9.32e-26 102
Msa0500990 MtrunA17_Chr0c02g0489811 85.965 57 8 0 1137 1193 5 61 2.24e-25 100
Msa0500990 MtrunA17_Chr7g0229221 82.456 57 10 0 1137 1193 5 61 4.47e-24 97.1
Msa0500990 MtrunA17_Chr0c02g0489731 78.947 57 12 0 1137 1193 5 61 1.30e-22 93.2
Msa0500990 MtrunA17_Chr0c02g0489721 76.087 46 11 0 1067 1112 1 46 6.41e-20 84.3
Msa0500990 MtrunA17_Chr7g0229231 76.087 46 11 0 1067 1112 1 46 6.41e-20 84.3
Msa0500990 MtrunA17_Chr6g0456921 40.385 156 34 5 872 1026 1 98 3.63e-19 90.5
Msa0500990 MtrunA17_Chr0c02g0489821 75.556 45 11 0 1069 1113 1 45 1.75e-18 80.1
Msa0500990 MtrunA17_Chr6g0456941 48.515 101 31 2 526 623 149 231 1.63e-16 80.5
Msa0500990 MtrunA17_Chr6g0456781 57.143 70 23 3 654 723 25 87 1.46e-15 75.1
Msa0500990 MtrunA17_Chr5g0402011 87.097 31 4 0 718 748 21 51 3.61e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0500990 AT1G79000.1 47.388 804 380 10 581 1361 883 1666 0.0 774
Msa0500990 AT1G79000.2 47.388 804 380 10 581 1361 883 1666 0.0 774
Msa0500990 AT1G79000.3 47.388 804 380 10 581 1361 859 1642 0.0 773
Msa0500990 AT1G16710.3 47.264 804 381 10 581 1361 866 1649 0.0 767
Msa0500990 AT1G16710.10 47.264 804 381 10 581 1361 866 1649 0.0 767
Msa0500990 AT1G16710.8 47.264 804 381 10 581 1361 866 1649 0.0 767
Msa0500990 AT1G16710.7 47.264 804 381 10 581 1361 866 1649 0.0 767
Msa0500990 AT1G16710.1 47.264 804 381 10 581 1361 892 1675 0.0 767
Msa0500990 AT1G16710.2 47.264 804 381 10 581 1361 863 1646 0.0 766
Msa0500990 AT1G16710.6 47.264 804 381 10 581 1361 827 1610 0.0 766
Msa0500990 AT1G16710.4 47.264 804 381 10 581 1361 827 1610 0.0 766
Msa0500990 AT1G16710.5 47.264 804 381 10 581 1361 827 1610 0.0 766
Msa0500990 AT3G12980.1 44.915 826 403 14 565 1367 848 1644 0.0 726
Msa0500990 AT3G12980.2 44.915 826 403 14 565 1367 767 1563 0.0 725
Msa0500990 AT1G55970.1 40.452 885 462 16 522 1367 588 1446 0.0 649
Msa0500990 AT1G55970.2 40.678 885 446 17 522 1367 588 1432 0.0 646
Msa0500990 AT1G67220.1 41.519 790 398 18 602 1359 604 1361 0.0 604
Msa0500990 AT1G16710.9 49.820 556 263 6 581 1123 866 1418 5.31e-177 566

Find 279 sgRNAs with CRISPR-Local

Find 420 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACTCTTTGTCCTTCTTTC+AGG 0.058574 3_4:+41647720 None:intergenic
CCCTGGTAGGCCATATATTT+TGG 0.151804 3_4:+41646725 None:intergenic
CAAGCTTATCATTTAATAAA+TGG 0.192045 3_4:-41645291 Msa0500990:three_prime_UTR
TTACTGAAGGCTGCTAATTT+TGG 0.192321 3_4:-41648535 Msa0500990:CDS
AGAGTAGATTATTTGAAAAT+AGG 0.198691 3_4:-41646259 Msa0500990:CDS
TCTCACATTTCCAGCTCTTT+TGG 0.200246 3_4:+41646081 None:intergenic
GAAAGTGAATAAGCAGTTTC+TGG 0.202627 3_4:-41648075 Msa0500990:CDS
TTCTTCTCTTGATCAACTTT+TGG 0.216290 3_4:+41649654 None:intergenic
TTACGGTTGTATACCATTTC+AGG 0.223859 3_4:+41651405 None:intergenic
AATTCTGAATGTTGCACTTT+TGG 0.226098 3_4:+41650329 None:intergenic
AAATGGTATACAACCGTAAT+TGG 0.232510 3_4:-41651401 Msa0500990:CDS
CACTGAATGCAAGGAAATTC+AGG 0.241855 3_4:-41646623 Msa0500990:CDS
TGTAACTTACCTGTTTCTTA+TGG 0.254857 3_4:-41650873 Msa0500990:CDS
GATGACAAACAAAATAAAAT+TGG 0.261822 3_4:-41649519 Msa0500990:CDS
AAAATGATGGATTCAGGTTT+TGG 0.264675 3_4:-41650428 Msa0500990:CDS
ATTAGGTTGGCCAAAATATA+TGG 0.272286 3_4:-41646735 Msa0500990:intron
TATCCCTCCAGTTGCTGATA+TGG 0.276376 3_4:-41650904 Msa0500990:CDS
AATGTCTTTGGCAGTGTCTT+TGG 0.279840 3_4:+41646976 None:intergenic
CCAGAACTTATTACAATTGA+TGG 0.286120 3_4:-41649756 Msa0500990:CDS
CGCTCAAAAGAAATTGAAAA+TGG 0.288181 3_4:-41648571 Msa0500990:CDS
GAGTAGATTATTTGAAAATA+GGG 0.292484 3_4:-41646258 Msa0500990:CDS
TTTGAGTCAACTTGTGTTCA+TGG 0.292920 3_4:+41646003 None:intergenic
AATTCATCAAAACATCTCTT+TGG 0.303541 3_4:+41651468 None:intergenic
AAAACTGATGAAGAATTTCT+TGG 0.304548 3_4:+41651504 None:intergenic
ATGGTCTTTAAAGCTCTATT+TGG 0.306293 3_4:+41647016 None:intergenic
ATACAGAAAATGATGGATTC+AGG 0.307913 3_4:-41650434 Msa0500990:CDS
AGCCTATTCCTACTGCATTC+TGG 0.312043 3_4:-41650007 Msa0500990:CDS
TCCTATAATACTGGTTACTA+TGG 0.313926 3_4:-41650999 Msa0500990:CDS
CTACAACAACAGAAGAGATT+TGG 0.316078 3_4:-41648626 Msa0500990:CDS
TCGCATCACTAAAATGTCTT+TGG 0.318012 3_4:+41646964 None:intergenic
GGAATGTATGTCCAGGAGTT+TGG 0.324631 3_4:-41647813 Msa0500990:CDS
TCAGGAGTCAAATGAGAAAA+TGG 0.324783 3_4:-41645907 Msa0500990:intron
CTTCGTTTACCATGAGATAT+TGG 0.325834 3_4:-41647682 Msa0500990:intron
CCATCAATTGTAATAAGTTC+TGG 0.331586 3_4:+41649756 None:intergenic
TTTGTTTGCTTCTCTTGATC+AGG 0.340519 3_4:+41649447 None:intergenic
AATGTAATGGTTGATACATT+TGG 0.340524 3_4:-41650218 Msa0500990:CDS
GTTTCCTGACTTGCTACATA+TGG 0.342073 3_4:-41647521 Msa0500990:CDS
GTTCCACATTACTCTCATAA+TGG 0.342403 3_4:+41650291 None:intergenic
GGATGTGGTTGAAAAGAATA+AGG 0.343529 3_4:+41650350 None:intergenic
TCTCGTTTGCCATACTTTGA+TGG 0.348808 3_4:-41647130 Msa0500990:CDS
TTCATCTTGGTGGGAGTACT+TGG 0.349443 3_4:-41651536 Msa0500990:CDS
CTTTAGCATCTGTCCCCTCT+TGG 0.355618 3_4:+41649490 None:intergenic
GCCATAGTAACCAGTATTAT+AGG 0.357708 3_4:+41650998 None:intergenic
CATTTGCTCTGCATGCTATA+AGG 0.358326 3_4:-41646042 Msa0500990:CDS
GGCAGTGTCTTTGGAAGGAT+TGG 0.359255 3_4:+41646985 None:intergenic
GTGCGAAATTCGAGTGAATC+GGG 0.363640 3_4:-41645681 Msa0500990:CDS
TCAGCGTGTGCAAGCTCTAC+TGG 0.369624 3_4:-41651033 Msa0500990:CDS
GGATGAGATATTCCCGCTTC+TGG 0.370448 3_4:+41650972 None:intergenic
TTTCTGTAGAAAAGAAGAAT+TGG 0.372012 3_4:-41648914 Msa0500990:CDS
CCTTTCGAGGGAATCAGTTT+AGG 0.373188 3_4:+41649867 None:intergenic
GAGGACATACAAGGAAGAAT+TGG 0.373626 3_4:-41649720 Msa0500990:CDS
TGGTCACTTAGCACGGTTCT+TGG 0.373788 3_4:+41648499 None:intergenic
TTCTTATGGTGGAAGCAATC+TGG 0.380010 3_4:-41650859 Msa0500990:CDS
ATGCCATAGATTAGGGAATC+TGG 0.384722 3_4:+41649816 None:intergenic
TCTTGATTTGAGAACAGTTT+GGG 0.392126 3_4:+41645726 None:intergenic
GTCTATCATGCCATAGATTA+GGG 0.394178 3_4:+41649809 None:intergenic
TTCTTTGTTGCTGCTGAGAA+AGG 0.394757 3_4:-41647172 Msa0500990:CDS
AGTCTATCATGCCATAGATT+AGG 0.395208 3_4:+41649808 None:intergenic
AAAAGAAGAATTGGATGTAC+AGG 0.398942 3_4:-41648905 Msa0500990:CDS
CTTCTGTTTCAGCAGATTGA+AGG 0.398990 3_4:-41647855 Msa0500990:CDS
ACTGAAGAAAATATTGTTGT+TGG 0.399474 3_4:-41647217 Msa0500990:CDS
GATATATCAATCTGGGAATC+AGG 0.403548 3_4:-41645925 Msa0500990:CDS
GAGCCAGATTCCCTAATCTA+TGG 0.403562 3_4:-41649819 Msa0500990:CDS
TTTCATTCTGCGGGAGTTAA+GGG 0.405364 3_4:-41650251 Msa0500990:CDS
ATGGATCCTATTCCTACTAA+TGG 0.406298 3_4:-41650104 Msa0500990:CDS
GTTCCTAAGTCCTATAATAC+TGG 0.409319 3_4:-41651008 Msa0500990:CDS
CAGCAGTCTCCATCAAAGTA+TGG 0.411615 3_4:+41647121 None:intergenic
GAGTTCACAGTTCAAATAGT+TGG 0.411786 3_4:-41645318 Msa0500990:three_prime_UTR
CTTGGTGAGAGTAGGCATAC+TGG 0.412661 3_4:+41650031 None:intergenic
TTGATCAGGTGTTAGTTCAC+TGG 0.412828 3_4:+41649461 None:intergenic
TTCTTGATTTGAGAACAGTT+TGG 0.414152 3_4:+41645725 None:intergenic
CACTCGAATTTCGCACCTAC+TGG 0.416982 3_4:+41645688 None:intergenic
TCAGAGTAGGATTGTGTAGA+TGG 0.417165 3_4:+41646150 None:intergenic
CGAGTTGCATACACTTTGTC+AGG 0.417455 3_4:-41646417 Msa0500990:intron
CATATTGCAAGTGAGCTATA+AGG 0.418930 3_4:+41646695 None:intergenic
CGCATTCAGAGCCAAACTCC+TGG 0.419362 3_4:+41647802 None:intergenic
GCCTGTGCTCCTTCAAGAAA+AGG 0.420899 3_4:-41647498 Msa0500990:CDS
TTTCCTGACTTGCTACATAT+GGG 0.421164 3_4:-41647520 Msa0500990:CDS
CCACAACATGAACAAACAAT+TGG 0.421500 3_4:+41648958 None:intergenic
TCAAGACCGATATATCAATC+TGG 0.421778 3_4:-41645933 Msa0500990:CDS
TGTATATCCTCTCCATTAGT+AGG 0.423314 3_4:+41650092 None:intergenic
GATCAACTTCCACTGAGTTT+CGG 0.425661 3_4:+41649784 None:intergenic
GGTGGGAAAATCACATTCAA+TGG 0.426047 3_4:-41648847 Msa0500990:CDS
CGATGAAGTACTTGAAGAAC+CGG 0.433225 3_4:-41648785 Msa0500990:intron
GCAATATCAACCACAGAAGT+TGG 0.433488 3_4:-41650540 Msa0500990:CDS
TGATTCCCAGATTGATATAT+CGG 0.436292 3_4:+41645927 None:intergenic
AAGGGTGCGCATCAGAACTA+TGG 0.436516 3_4:+41646450 None:intergenic
TGCAACTCGCCATTCTTTGA+AGG 0.439300 3_4:+41646431 None:intergenic
CGGCGTAGCTTATCATTCTT+CGG 0.441625 3_4:+41647432 None:intergenic
CTCTAGGAATTGCAAAGACT+TGG 0.444404 3_4:-41645615 Msa0500990:CDS
ATGTATACACAACGCTGATT+CGG 0.444563 3_4:+41647774 None:intergenic
GACCATCATCGAGGAATACT+TGG 0.446298 3_4:+41646178 None:intergenic
TCTTTGTTGCTGCTGAGAAA+GGG 0.448017 3_4:-41647171 Msa0500990:CDS
GACAGACAGTTGCAAATCAA+TGG 0.448888 3_4:-41649610 Msa0500990:CDS
ATCATTCAGAATGAGCAACT+TGG 0.449014 3_4:-41651257 Msa0500990:CDS
ATCATTATGTTTAGTGTTGG+AGG 0.449050 3_4:+41646292 None:intergenic
GCCAAAATATATGGCCTACC+AGG 0.452024 3_4:-41646726 Msa0500990:CDS
CCTGTGCTCCTTCAAGAAAA+GGG 0.454880 3_4:-41647497 Msa0500990:CDS
TTGCTTCCACCATAAGAAAC+AGG 0.456261 3_4:+41650864 None:intergenic
TCCTCAGTTACAACTGTTAG+TGG 0.459002 3_4:-41649927 Msa0500990:CDS
AGGGATCTTCCCATTGTAGT+AGG 0.461958 3_4:+41650629 None:intergenic
TTATTCCATTGATCAAAACT+TGG 0.465205 3_4:+41650386 None:intergenic
CATCAATTGTAATAAGTTCT+GGG 0.467890 3_4:+41649757 None:intergenic
CTTATAGCATGCAGAGCAAA+TGG 0.467941 3_4:+41646043 None:intergenic
CAAACTGAAACTGAGACTTC+TGG 0.468204 3_4:+41646216 None:intergenic
TACTATGGCGTGCCAGAAGC+GGG 0.468456 3_4:-41650984 Msa0500990:CDS
TGAGCAACTTGGGCCTGCGC+TGG 0.468657 3_4:-41651246 Msa0500990:CDS
TGCCGTGAAGTGATAGTGTC+TGG 0.468924 3_4:-41646661 Msa0500990:CDS
TTTGATGGAGACTGCTGGTC+TGG 0.471841 3_4:-41647115 Msa0500990:CDS
TAAAACTTGAATCTTCAGAT+TGG 0.472509 3_4:+41650606 None:intergenic
AATATCATTATGTTTAGTGT+TGG 0.474871 3_4:+41646289 None:intergenic
AGCACATCCATATCAGCAAC+TGG 0.475712 3_4:+41650897 None:intergenic
TTCTTCAAGTACTTCATCGT+TGG 0.477109 3_4:+41648789 None:intergenic
GTCCAGAATGCAGTAGGAAT+AGG 0.478712 3_4:+41650005 None:intergenic
GATCTATAAGAGAATTCAGC+AGG 0.480043 3_4:+41648029 None:intergenic
TCCTCTCCATTAGTAGGAAT+AGG 0.482957 3_4:+41650098 None:intergenic
TTATACTTGCTGCTCACTCT+AGG 0.483492 3_4:-41645631 Msa0500990:CDS
GGCAGGTTATGAGCAATAGA+AGG 0.483523 3_4:+41650951 None:intergenic
ACTTACCAATGCTGCTTCAA+AGG 0.483696 3_4:-41651213 Msa0500990:intron
AGGCCCATATGTAGCAAGTC+AGG 0.483952 3_4:+41647517 None:intergenic
AACTTGAATCTTCAGATTGG+AGG 0.484803 3_4:+41650609 None:intergenic
ACCAGCTTCTAAGCCTTTCG+AGG 0.488323 3_4:+41649854 None:intergenic
ATTACTTCTGAGGAGGAAGC+AGG 0.490995 3_4:-41649039 Msa0500990:CDS
GGTGCGAAATTCGAGTGAAT+CGG 0.490997 3_4:-41645682 Msa0500990:CDS
TCATCAAAACATCTCTTTGG+CGG 0.493031 3_4:+41651471 None:intergenic
CTGGCGGTATCATCCTGAAA+TGG 0.493874 3_4:-41651418 Msa0500990:CDS
TCCCAGACACTATCACTTCA+CGG 0.494548 3_4:+41646659 None:intergenic
GGAAGGATTGGCATGTCCCA+TGG 0.498688 3_4:+41646997 None:intergenic
AAATCAATGGAAATTGACAT+TGG 0.499856 3_4:-41649597 Msa0500990:CDS
TCAGCAGGGTAATTCTCCTC+TGG 0.499997 3_4:+41648044 None:intergenic
AATCAATGGAAATTGACATT+GGG 0.503687 3_4:-41649596 Msa0500990:CDS
ACATCATAGCTTTCAAGCCC+TGG 0.503981 3_4:+41650191 None:intergenic
CATTATGTTTAGTGTTGGAG+GGG 0.505283 3_4:+41646294 None:intergenic
GTTGATACATTTGGACAGCC+AGG 0.507113 3_4:-41650209 Msa0500990:CDS
GATGCGCACCCTTCAAAGAA+TGG 0.507431 3_4:-41646440 Msa0500990:CDS
CTCATAATGGAGAGAAGAGA+GGG 0.508941 3_4:+41650304 None:intergenic
TAGGATTGTGTAGATGGTAG+AGG 0.509799 3_4:+41646156 None:intergenic
TTCTAAGTGGTCACTTAGCA+CGG 0.510372 3_4:+41648492 None:intergenic
TTGTAGGTTATAGCTGCAAA+AGG 0.511094 3_4:-41648137 Msa0500990:intron
AGTGTAGCATTCCACGGTGC+AGG 0.512236 3_4:-41645592 Msa0500990:intron
ATGTGTGAACAAATCAATCA+AGG 0.513659 3_4:+41649395 None:intergenic
TGCCAAAATACAGAAAATGA+TGG 0.514444 3_4:-41650441 Msa0500990:CDS
TGCAGTAGGAATAGGCTCCT+TGG 0.514495 3_4:+41650013 None:intergenic
ACAAACCTTTGAAGCAGCAT+TGG 0.514651 3_4:+41651208 None:intergenic
ATGTGTTACAAGACTTCTAA+AGG 0.514902 3_4:-41648868 Msa0500990:CDS
AGACTATGAAAAGATGTTGA+AGG 0.515920 3_4:-41647047 Msa0500990:CDS
CCCTCGAAAGGCTTAGAAGC+TGG 0.515949 3_4:-41649855 Msa0500990:CDS
CACGCTGATTCAATGTCTCC+AGG 0.517950 3_4:+41651048 None:intergenic
TCATTATGTTTAGTGTTGGA+GGG 0.517970 3_4:+41646293 None:intergenic
ACTTGAATCTTCAGATTGGA+GGG 0.518206 3_4:+41650610 None:intergenic
TTTAACACAGATTACTTCTG+AGG 0.520413 3_4:-41649049 Msa0500990:intron
TCCATTGATCAAAACTTGGA+TGG 0.525144 3_4:+41650390 None:intergenic
CTTTGTTGCTGCTGAGAAAG+GGG 0.525499 3_4:-41647170 Msa0500990:CDS
GTGGGAAAATCACATTCAAT+GGG 0.525911 3_4:-41648846 Msa0500990:CDS
CCAATTGTTTGTTCATGTTG+TGG 0.526305 3_4:-41648958 Msa0500990:CDS
CAAGACCGATATATCAATCT+GGG 0.526622 3_4:-41645932 Msa0500990:CDS
TATGTCCTCTCAATCTGCCT+CGG 0.527546 3_4:-41650585 Msa0500990:CDS
CATGTCGAGACATTGCATCC+TGG 0.528409 3_4:+41650124 None:intergenic
AACTTACCTGTTTCTTATGG+TGG 0.529340 3_4:-41650870 Msa0500990:CDS
CAGCGTGTGCAAGCTCTACT+GGG 0.531640 3_4:-41651032 Msa0500990:CDS
CTGCTGGTCTGGTAATGCTA+TGG 0.533073 3_4:-41647104 Msa0500990:CDS
TTGTCACGGGTATAAAATCC+AGG 0.533640 3_4:-41650142 Msa0500990:CDS
GGGGATAAACACCAATGTAA+TGG 0.535712 3_4:-41650231 Msa0500990:CDS
GATGAATTAAGCAATCAAGT+AGG 0.536338 3_4:-41651453 Msa0500990:CDS
GCAAAGTGGGAAAATGTTGA+AGG 0.536852 3_4:-41648436 Msa0500990:CDS
CATGAACAAACAATTGGTAC+TGG 0.538233 3_4:+41648964 None:intergenic
AATTTAAACAATATTGTCAC+GGG 0.538538 3_4:-41650155 Msa0500990:CDS
TTCTGAAAATCCAACTTCTG+TGG 0.541275 3_4:+41650530 None:intergenic
TTTCAAATAATCTACTCTCA+AGG 0.542071 3_4:+41646264 None:intergenic
TGCCAAGTATTCCTCGATGA+TGG 0.542961 3_4:-41646180 Msa0500990:CDS
GCATTTGTCCAGAATGCAGT+AGG 0.543207 3_4:+41649999 None:intergenic
GCAACCTTGCTTATGAGAGC+AGG 0.546870 3_4:+41649558 None:intergenic
ACAATGTATTCCAAAAGAGC+TGG 0.547262 3_4:-41646091 Msa0500990:CDS
TTGATCAAATGTTAGCTCAT+CGG 0.547616 3_4:+41649965 None:intergenic
ACATACAGTTATTTGCGTGT+TGG 0.550948 3_4:+41650799 None:intergenic
CAATTTAAACAATATTGTCA+CGG 0.551389 3_4:-41650156 Msa0500990:CDS
TCATTCAGAATGAGCAACTT+GGG 0.553426 3_4:-41651256 Msa0500990:CDS
TTTACAACAGTCATCAGAGT+AGG 0.553593 3_4:+41646137 None:intergenic
TGCTGAGAAAGGGGACTCCA+AGG 0.553735 3_4:-41647161 Msa0500990:CDS
AGGGAACGAGAATCTTGATA+AGG 0.553771 3_4:-41648416 Msa0500990:intron
CATACTTTGATGGAGACTGC+TGG 0.554044 3_4:-41647120 Msa0500990:CDS
TCTGCATGCTATAAGGATAG+AGG 0.554961 3_4:-41646035 Msa0500990:CDS
ATCTGCCTCGGTGAATACTT+CGG 0.556680 3_4:-41650573 Msa0500990:CDS
AATGCAATAAATGCAAAAGA+TGG 0.558178 3_4:-41648669 Msa0500990:CDS
AGCGAGAAGATGTTTGCCAA+GGG 0.559968 3_4:-41651561 None:intergenic
ACACATGCCAATTATGTGAA+AGG 0.560127 3_4:-41649005 Msa0500990:CDS
TCTTTGGCAGTGTCTTTGGA+AGG 0.560134 3_4:+41646980 None:intergenic
AAAATTGGATTCAACCAAGA+GGG 0.562248 3_4:-41649504 Msa0500990:CDS
CACAAAGATTCATTGATCAA+CGG 0.562806 3_4:+41645347 None:intergenic
AGGAAATTCAGGAGTGCGAA+AGG 0.562968 3_4:-41646612 Msa0500990:intron
ATGGATTCAGTATTATCAGA+AGG 0.564182 3_4:+41650473 None:intergenic
CATGCAAGAGAGAGCAAAGT+GGG 0.567140 3_4:-41648449 Msa0500990:CDS
GAACCATCACCAGGAAAACA+AGG 0.569408 3_4:+41650930 None:intergenic
AGTAGCAATATTTCCAGCGC+AGG 0.569879 3_4:+41651233 None:intergenic
GAACAGTTTGGGTGAGAGCA+AGG 0.570733 3_4:+41645737 None:intergenic
TAAAATTGGATTCAACCAAG+AGG 0.570792 3_4:-41649505 Msa0500990:CDS
TGCAACTGTCTGTCACGACA+TGG 0.574615 3_4:+41649619 None:intergenic
TGATCAATGGAATAATGGGA+TGG 0.574870 3_4:-41650378 Msa0500990:CDS
GCAACTCGCCATTCTTTGAA+GGG 0.578144 3_4:+41646432 None:intergenic
TAACCAGTATTATAGGACTT+AGG 0.578545 3_4:+41651005 None:intergenic
ACATATTAATAGTCTCAGAA+AGG 0.580375 3_4:-41649358 Msa0500990:CDS
GTTGCTAATTGATCTGATGT+TGG 0.582522 3_4:+41650833 None:intergenic
AAGGTTCAGCATTAGCTGCA+CGG 0.583631 3_4:+41645756 None:intergenic
TTCATTCTGCGGGAGTTAAG+GGG 0.586503 3_4:-41650250 Msa0500990:CDS
CAGGATGCAATGTCTCGACA+TGG 0.588607 3_4:-41650123 Msa0500990:CDS
AAGCGAGAAGATGTTTGCCA+AGG 0.589431 3_4:-41651562 None:intergenic
GGGATAGATGAACCATCACC+AGG 0.589609 3_4:+41650921 None:intergenic
CCCACCAAGATGAAAACCCT+TGG 0.589685 3_4:+41651545 None:intergenic
TGATAGTGTCTGGGAAGCGA+TGG 0.590031 3_4:-41646651 Msa0500990:CDS
TTACTATGGCGTGCCAGAAG+CGG 0.592212 3_4:-41650985 Msa0500990:CDS
CCTGAAAGAAGGACAAAGAG+TGG 0.592455 3_4:-41647720 Msa0500990:CDS
AAATAGAGCTTTAAAGACCA+TGG 0.593540 3_4:-41647014 Msa0500990:CDS
CAAACGAGAAGCTGTCACCT+TGG 0.594598 3_4:+41647144 None:intergenic
AAGTAGGATTCTCCTCAGAC+TGG 0.594890 3_4:-41651437 Msa0500990:CDS
CTTTAGCGTCTGTCCCCTCG+TGG 0.599122 3_4:+41649691 None:intergenic
TCCTATTCCTACTAATGGAG+AGG 0.602402 3_4:-41650099 Msa0500990:CDS
AAATGTATCAACCATTACAT+TGG 0.602722 3_4:+41650220 None:intergenic
CCCACTAACAGTTGTAACTG+AGG 0.603428 3_4:+41649926 None:intergenic
AACACAGATTACTTCTGAGG+AGG 0.604308 3_4:-41649046 Msa0500990:intron
AAAGAAGAATTGGATGTACA+GGG 0.605113 3_4:-41648904 Msa0500990:CDS
CCAAAATATATGGCCTACCA+GGG 0.605422 3_4:-41646725 Msa0500990:CDS
TTACTTCTGAGGAGGAAGCA+GGG 0.608500 3_4:-41649038 Msa0500990:CDS
ATTCACCGAGGCAGATTGAG+AGG 0.610362 3_4:+41650580 None:intergenic
CTGTGCTCCTTCAAGAAAAG+GGG 0.610873 3_4:-41647496 Msa0500990:CDS
GCTTGAAAGCTATGATGTGA+TGG 0.612988 3_4:-41650186 Msa0500990:CDS
GATGATGAAGAGGACATACA+AGG 0.616251 3_4:-41649729 Msa0500990:CDS
CATCACCAGGAAAACAAGGC+AGG 0.617573 3_4:+41650934 None:intergenic
CAGGAGTTTGGCTCTGAATG+CGG 0.618695 3_4:-41647801 Msa0500990:CDS
TGGATTCAGTATTATCAGAA+GGG 0.619302 3_4:+41650474 None:intergenic
CCTAAACTGATTCCCTCGAA+AGG 0.619511 3_4:-41649867 Msa0500990:CDS
AATAGAGCTTTAAAGACCAT+GGG 0.619881 3_4:-41647013 Msa0500990:CDS
TTGATACATTTGGACAGCCA+GGG 0.623297 3_4:-41650208 Msa0500990:CDS
CAAAGTGGGAAAATGTTGAA+GGG 0.624977 3_4:-41648435 Msa0500990:CDS
TGCGAAATTCGAGTGAATCG+GGG 0.624993 3_4:-41645680 Msa0500990:CDS
TCTCCATTATGAGAGTAATG+TGG 0.625625 3_4:-41650294 Msa0500990:CDS
GCAGGAGGAATATATGAACC+TGG 0.625899 3_4:-41651066 Msa0500990:intron
CCTCAGTTACAACTGTTAGT+GGG 0.626164 3_4:-41649926 Msa0500990:CDS
TGATGGTGATGATGATGAAG+AGG 0.626309 3_4:-41649739 Msa0500990:CDS
CCAGCTTCTAAGCCTTTCGA+GGG 0.626326 3_4:+41649855 None:intergenic
GTTACAAGACTTCTAAAGGT+GGG 0.626500 3_4:-41648864 Msa0500990:CDS
CATGGTAAACGAAGGTACGA+AGG 0.628852 3_4:+41647691 None:intergenic
TTTAGAAGTCTTGTAACACA+TGG 0.632450 3_4:+41648870 None:intergenic
GCAGAGCAAATGGTACACTC+TGG 0.633761 3_4:+41646053 None:intergenic
TCTCATAATGGAGAGAAGAG+AGG 0.633876 3_4:+41650303 None:intergenic
CATCCATATCAGCAACTGGA+GGG 0.633921 3_4:+41650901 None:intergenic
AAAGCATGCTCACTTACTGA+AGG 0.634634 3_4:-41648548 Msa0500990:CDS
ATGGTAAACGAAGGTACGAA+GGG 0.635264 3_4:+41647692 None:intergenic
CAGTATGCCTACTCTCACCA+AGG 0.636206 3_4:-41650030 Msa0500990:CDS
TATGCCTGCTCTCATAAGCA+AGG 0.636968 3_4:-41649562 Msa0500990:CDS
AGGATGATACCGCCAGTCTG+AGG 0.637708 3_4:+41651425 None:intergenic
TGTTACAAGACTTCTAAAGG+TGG 0.638383 3_4:-41648865 Msa0500990:CDS
ACTTGGAGTGTAGCATTCCA+CGG 0.640972 3_4:-41645598 Msa0500990:CDS
AAAGAAATGATCATATACGT+TGG 0.641068 3_4:+41647189 None:intergenic
TGGAATTTAATCTGATGCCG+TGG 0.642107 3_4:+41650051 None:intergenic
GCCGTGAAGTGATAGTGTCT+GGG 0.643577 3_4:-41646660 Msa0500990:CDS
GATAGACTGCCGAAACTCAG+TGG 0.644616 3_4:-41649793 Msa0500990:CDS
ACTAATGGAGAGGATATACA+AGG 0.650656 3_4:-41650089 Msa0500990:CDS
ATTAACAACATGTCTAACAG+TGG 0.650867 3_4:+41650502 None:intergenic
ATAGGCTCCTTGGTGAGAGT+AGG 0.651101 3_4:+41650023 None:intergenic
GTTTCTGGATATCATTCCAG+AGG 0.661258 3_4:-41648060 Msa0500990:CDS
TAGGATTCTCCTCAGACTGG+CGG 0.662995 3_4:-41651434 Msa0500990:CDS
CAATATCTCATGGTAAACGA+AGG 0.666016 3_4:+41647683 None:intergenic
AGAATTGGATTCAACCACGA+GGG 0.666202 3_4:-41649705 Msa0500990:CDS
CGAAGAATGATAAGCTACGC+CGG 0.667085 3_4:-41647431 Msa0500990:CDS
AGCTGTTCTCTCATGCCAGT+AGG 0.676221 3_4:-41645703 Msa0500990:CDS
ATCTATAAGAGAATTCAGCA+GGG 0.680316 3_4:+41648030 None:intergenic
TCGAGGAATACTTGGCACGA+CGG 0.681417 3_4:+41646186 None:intergenic
AAATTGGATTCAACCAAGAG+GGG 0.683045 3_4:-41649503 Msa0500990:CDS
GGCAGAACTAAATTTGACCA+CGG 0.684062 3_4:-41650068 Msa0500990:CDS
GAATTGGATTCAACCACGAG+GGG 0.685446 3_4:-41649704 Msa0500990:CDS
AGAATGATAAGCTACGCCGG+TGG 0.695717 3_4:-41647428 Msa0500990:intron
TCATAATGGAGAGAAGAGAG+GGG 0.696827 3_4:+41650305 None:intergenic
GGAGGGGATATCATCAACAA+CGG 0.699125 3_4:+41646310 None:intergenic
ACATCCATATCAGCAACTGG+AGG 0.703827 3_4:+41650900 None:intergenic
TCATGCAAGAGAGAGCAAAG+TGG 0.716033 3_4:-41648450 Msa0500990:CDS
ATAACAACACACCTGCACCG+TGG 0.731435 3_4:+41645581 None:intergenic
ATGGTAGAGGACCATCATCG+AGG 0.748774 3_4:+41646169 None:intergenic
AAGAATTGGATTCAACCACG+AGG 0.755598 3_4:-41649706 Msa0500990:CDS
ATCTTCCGAAGTATTCACCG+AGG 0.761656 3_4:+41650568 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+AGG + chr3_4:41648454-41648473 None:intergenic 0.0%
!! TAATTGTTAAAATAGAATTA+TGG + chr3_4:41647637-41647656 None:intergenic 10.0%
!!! ATTTAATTTTCAAAGAAATG+TGG - chr3_4:41645356-41645375 Msa0500990:CDS 15.0%
!! ATTATGTAAATAACTTAAAC+TGG + chr3_4:41649913-41649932 None:intergenic 15.0%
!!! TTTTTCTTCTTATCCAATTA+CGG + chr3_4:41645322-41645341 None:intergenic 20.0%
!!! CAATTGTTTTTCTACAAATT+TGG - chr3_4:41645619-41645638 Msa0500990:CDS 20.0%
!! CAATTTAAACAATATTGTCA+CGG - chr3_4:41646551-41646570 Msa0500990:intron 20.0%
!! AATTTAAACAATATTGTCAC+GGG - chr3_4:41646552-41646571 Msa0500990:intron 20.0%
!! GATGACAAACAAAATAAAAT+TGG - chr3_4:41647188-41647207 Msa0500990:CDS 20.0%
!! CTAAGAAAAATCTAGAAAAA+AGG - chr3_4:41647894-41647913 Msa0500990:intron 20.0%
!! TAATCGATATTAAAACTTAC+CGG + chr3_4:41647944-41647963 None:intergenic 20.0%
!! GATAAGAATAAGAAAATGAT+AGG + chr3_4:41648360-41648379 None:intergenic 20.0%
!! ATAAAAATACCAATATCTCA+TGG + chr3_4:41649037-41649056 None:intergenic 20.0%
!! ACATAAATAGAAAGAATGTA+AGG + chr3_4:41649107-41649126 None:intergenic 20.0%
!!! ACCTTGATTTTTGTAAAAAA+AGG - chr3_4:41649162-41649181 Msa0500990:intron 20.0%
!!! CCTTGATTTTTGTAAAAAAA+GGG - chr3_4:41649163-41649182 Msa0500990:intron 20.0%
!!! CTTGATTTTTGTAAAAAAAG+GGG - chr3_4:41649164-41649183 Msa0500990:intron 20.0%
!! CAAACATTATAAATATTCAG+TGG + chr3_4:41649436-41649455 None:intergenic 20.0%
!! TTTATAATGTTTGTTTATGC+AGG - chr3_4:41649443-41649462 Msa0500990:CDS 20.0%
!! GTATCTATCAATGTTAAAAA+AGG - chr3_4:41649465-41649484 Msa0500990:CDS 20.0%
!! TTCATTCACTCAATTATAAA+AGG + chr3_4:41649866-41649885 None:intergenic 20.0%
!!! GCATATGTATTCATTTTAAA+GGG + chr3_4:41650162-41650181 None:intergenic 20.0%
!!! AGCATATGTATTCATTTTAA+AGG + chr3_4:41650163-41650182 None:intergenic 20.0%
!! AATATCATTATGTTTAGTGT+TGG + chr3_4:41650421-41650440 None:intergenic 20.0%
!! AGAGTAGATTATTTGAAAAT+AGG - chr3_4:41650448-41650467 Msa0500990:CDS 20.0%
!! GAGTAGATTATTTGAAAATA+GGG - chr3_4:41650449-41650468 Msa0500990:CDS 20.0%
!! TTTAACCATAAAAAATGACT+TGG + chr3_4:41651224-41651243 None:intergenic 20.0%
!!! TATATTTATGTTGATTTTGC+AGG - chr3_4:41651280-41651299 Msa0500990:intron 20.0%
!!! ATATTTATGTTGATTTTGCA+GGG - chr3_4:41651281-41651300 Msa0500990:intron 20.0%
!! CAAGCTTATCATTTAATAAA+TGG - chr3_4:41651416-41651435 Msa0500990:CDS 20.0%
! AAAACTGATGAAGAATTTCT+TGG + chr3_4:41645206-41645225 None:intergenic 25.0%
! AATTCATCAAAACATCTCTT+TGG + chr3_4:41645242-41645261 None:intergenic 25.0%
!!! AGATTTTTTTCCTACTACAA+TGG - chr3_4:41646068-41646087 Msa0500990:CDS 25.0%
!!! GATTTTTTTCCTACTACAAT+GGG - chr3_4:41646069-41646088 Msa0500990:CDS 25.0%
! TAAAACTTGAATCTTCAGAT+TGG + chr3_4:41646104-41646123 None:intergenic 25.0%
!! ATCCATCATTTTCTGTATTT+TGG + chr3_4:41646271-41646290 None:intergenic 25.0%
! TTATTCCATTGATCAAAACT+TGG + chr3_4:41646324-41646343 None:intergenic 25.0%
!!! AGTTTTGATCAATGGAATAA+TGG - chr3_4:41646324-41646343 Msa0500990:intron 25.0%
!!! GTTTTGATCAATGGAATAAT+GGG - chr3_4:41646325-41646344 Msa0500990:intron 25.0%
!! AAATCCAATTTTTCATTCTG+CGG - chr3_4:41646446-41646465 Msa0500990:CDS 25.0%
! AAATGTATCAACCATTACAT+TGG + chr3_4:41646490-41646509 None:intergenic 25.0%
!! AATGTAATGGTTGATACATT+TGG - chr3_4:41646489-41646508 Msa0500990:intron 25.0%
! CATCAATTGTAATAAGTTCT+GGG + chr3_4:41646953-41646972 None:intergenic 25.0%
! AAATCAATGGAAATTGACAT+TGG - chr3_4:41647110-41647129 Msa0500990:CDS 25.0%
! AATCAATGGAAATTGACATT+GGG - chr3_4:41647111-41647130 Msa0500990:CDS 25.0%
! ACATATTAATAGTCTCAGAA+AGG - chr3_4:41647349-41647368 Msa0500990:intron 25.0%
!! ATGGTTCTTCTTTTAATCTT+TGG - chr3_4:41647501-41647520 Msa0500990:CDS 25.0%
! TTTCTGTAGAAAAGAAGAAT+TGG - chr3_4:41647793-41647812 Msa0500990:CDS 25.0%
! AATGCAATAAATGCAAAAGA+TGG - chr3_4:41648038-41648057 Msa0500990:CDS 25.0%
!! CATTTTCAATTTCTTTTGAG+CGG + chr3_4:41648138-41648157 None:intergenic 25.0%
!! TACAATTTTGCAGTAATTCA+TGG + chr3_4:41648555-41648574 None:intergenic 25.0%
! ATGAATTACTGCAAAATTGT+AGG - chr3_4:41648554-41648573 Msa0500990:CDS 25.0%
!! AGATTTAATAGAAGTTTGCT+TGG - chr3_4:41648817-41648836 Msa0500990:CDS 25.0%
!!! GCTCATTTTATTAGTTCTAT+TGG + chr3_4:41649077-41649096 None:intergenic 25.0%
!!! CCCTTTTTTTACAAAAATCA+AGG + chr3_4:41649166-41649185 None:intergenic 25.0%
! AAAACAAAGGAGATAAAAGT+AGG + chr3_4:41649394-41649413 None:intergenic 25.0%
! CATTATAAATATTCAGTGGT+TGG + chr3_4:41649432-41649451 None:intergenic 25.0%
! ACTGAAGAAAATATTGTTGT+TGG - chr3_4:41649490-41649509 Msa0500990:CDS 25.0%
! AAAGAAATGATCATATACGT+TGG + chr3_4:41649521-41649540 None:intergenic 25.0%
! TAAATGTACAACACTACAAA+TGG + chr3_4:41649809-41649828 None:intergenic 25.0%
! AATTATACAATGTCATTCGA+TGG - chr3_4:41649833-41649852 Msa0500990:CDS 25.0%
! ATTATACAATGTCATTCGAT+GGG - chr3_4:41649834-41649853 Msa0500990:CDS 25.0%
!!! TATGTATTCATTTTAAAGGG+AGG + chr3_4:41650159-41650178 None:intergenic 25.0%
! TATTCAGTGCACAATAATTA+AGG - chr3_4:41650196-41650215 Msa0500990:CDS 25.0%
!!! ATATGAAAAACTTCTGGTTT+AGG + chr3_4:41650322-41650341 None:intergenic 25.0%
! AGAATCATATGAAAAACTTC+TGG + chr3_4:41650328-41650347 None:intergenic 25.0%
! TTTCAAATAATCTACTCTCA+AGG + chr3_4:41650446-41650465 None:intergenic 25.0%
! GTAATGAAAACAACAAATCT+GGG + chr3_4:41650840-41650859 None:intergenic 25.0%
! AGTAATGAAAACAACAAATC+TGG + chr3_4:41650841-41650860 None:intergenic 25.0%
GATGAATTAAGCAATCAAGT+AGG - chr3_4:41645254-41645273 Msa0500990:three_prime_UTR 30.0%
AAATGGTATACAACCGTAAT+TGG - chr3_4:41645306-41645325 Msa0500990:three_prime_UTR 30.0%
CTTGCATTTGATACTCTTAT+TGG + chr3_4:41645578-41645597 None:intergenic 30.0%
! TGTTTTTCTACAAATTTGGC+AGG - chr3_4:41645623-41645642 Msa0500990:CDS 30.0%
TAACCAGTATTATAGGACTT+AGG + chr3_4:41645705-41645724 None:intergenic 30.0%
! TCCTATAATACTGGTTACTA+TGG - chr3_4:41645708-41645727 Msa0500990:CDS 30.0%
! TGTAACTTACCTGTTTCTTA+TGG - chr3_4:41645834-41645853 Msa0500990:intron 30.0%
CAAAGAAAGATTCGAAATTG+AGG + chr3_4:41645955-41645974 None:intergenic 30.0%
ATTAACAACATGTCTAACAG+TGG + chr3_4:41646208-41646227 None:intergenic 30.0%
TGGATTCAGTATTATCAGAA+GGG + chr3_4:41646236-41646255 None:intergenic 30.0%
ATGGATTCAGTATTATCAGA+AGG + chr3_4:41646237-41646256 None:intergenic 30.0%
!!! ATCATTTTCTGTATTTTGGC+AGG + chr3_4:41646267-41646286 None:intergenic 30.0%
TGCCAAAATACAGAAAATGA+TGG - chr3_4:41646266-41646285 Msa0500990:CDS 30.0%
!! ATACAGAAAATGATGGATTC+AGG - chr3_4:41646273-41646292 Msa0500990:CDS 30.0%
!!! AAAATGATGGATTCAGGTTT+TGG - chr3_4:41646279-41646298 Msa0500990:CDS 30.0%
! AATTCTGAATGTTGCACTTT+TGG + chr3_4:41646381-41646400 None:intergenic 30.0%
! AATCCAATTTTTCATTCTGC+GGG - chr3_4:41646447-41646466 Msa0500990:CDS 30.0%
TTGATCAAATGTTAGCTCAT+CGG + chr3_4:41646745-41646764 None:intergenic 30.0%
CCATCAATTGTAATAAGTTC+TGG + chr3_4:41646954-41646973 None:intergenic 30.0%
CCAGAACTTATTACAATTGA+TGG - chr3_4:41646951-41646970 Msa0500990:intron 30.0%
! TTCTTCTCTTGATCAACTTT+TGG + chr3_4:41647056-41647075 None:intergenic 30.0%
TAAAATTGGATTCAACCAAG+AGG - chr3_4:41647202-41647221 Msa0500990:CDS 30.0%
AAAATTGGATTCAACCAAGA+GGG - chr3_4:41647203-41647222 Msa0500990:CDS 30.0%
ATGTGTGAACAAATCAATCA+AGG + chr3_4:41647315-41647334 None:intergenic 30.0%
ACCAAATAGCTTAACTTTCT+GGG + chr3_4:41647469-41647488 None:intergenic 30.0%
AACCAAATAGCTTAACTTTC+TGG + chr3_4:41647470-41647489 None:intergenic 30.0%
ATTTGGTTAAAGCTCATGAA+TGG - chr3_4:41647482-41647501 Msa0500990:CDS 30.0%
TTTAACACAGATTACTTCTG+AGG - chr3_4:41647658-41647677 Msa0500990:intron 30.0%
!! GCTTTTTCCTTTCACATAAT+TGG + chr3_4:41647712-41647731 None:intergenic 30.0%
AAAAGAAGAATTGGATGTAC+AGG - chr3_4:41647802-41647821 Msa0500990:CDS 30.0%
AAAGAAGAATTGGATGTACA+GGG - chr3_4:41647803-41647822 Msa0500990:CDS 30.0%
! TTTAGAAGTCTTGTAACACA+TGG + chr3_4:41647840-41647859 None:intergenic 30.0%
ATGTGTTACAAGACTTCTAA+AGG - chr3_4:41647839-41647858 Msa0500990:CDS 30.0%
CGATTACTTTATAATTCAGC+TGG - chr3_4:41647958-41647977 Msa0500990:intron 30.0%
CGCTCAAAAGAAATTGAAAA+TGG - chr3_4:41648136-41648155 Msa0500990:intron 30.0%
!!! CAAGAAGTCTTTTTTCTAAG+TGG + chr3_4:41648231-41648250 None:intergenic 30.0%
! CTATTTTCAGTTTACATGCT+AGG + chr3_4:41648382-41648401 None:intergenic 30.0%
ATCTATAAGAGAATTCAGCA+GGG + chr3_4:41648680-41648699 None:intergenic 30.0%
! TTTAGTTCAGAAGAAGCAAT+AGG + chr3_4:41648755-41648774 None:intergenic 30.0%
GATGTCTATTCTAATATGTC+TGG - chr3_4:41648783-41648802 Msa0500990:intron 30.0%
! AGTATTTTATGCCTGAAAGA+AGG - chr3_4:41648976-41648995 Msa0500990:CDS 30.0%
AGACTATGAAAAGATGTTGA+AGG - chr3_4:41649660-41649679 Msa0500990:CDS 30.0%
!! ATGGTCTTTAAAGCTCTATT+TGG + chr3_4:41649694-41649713 None:intergenic 30.0%
!! AAATAGAGCTTTAAAGACCA+TGG - chr3_4:41649693-41649712 Msa0500990:CDS 30.0%
!! AATAGAGCTTTAAAGACCAT+GGG - chr3_4:41649694-41649713 Msa0500990:CDS 30.0%
!! ATTAGGTTGGCCAAAATATA+TGG - chr3_4:41649972-41649991 Msa0500990:CDS 30.0%
! GCACAATAATTAAGGCTTTT+TGG - chr3_4:41650204-41650223 Msa0500990:CDS 30.0%
! TCATTATGTTTAGTGTTGGA+GGG + chr3_4:41650417-41650436 None:intergenic 30.0%
! ATCATTATGTTTAGTGTTGG+AGG + chr3_4:41650418-41650437 None:intergenic 30.0%
TGATTCCCAGATTGATATAT+CGG + chr3_4:41650783-41650802 None:intergenic 30.0%
! TCTTGATTTGAGAACAGTTT+GGG + chr3_4:41650984-41651003 None:intergenic 30.0%
! TTCTTGATTTGAGAACAGTT+TGG + chr3_4:41650985-41651004 None:intergenic 30.0%
CAAAATCTCTCAAATTCTCT+AGG + chr3_4:41651167-41651186 None:intergenic 30.0%
! CTAGAGAATTTGAGAGATTT+TGG - chr3_4:41651165-41651184 Msa0500990:intron 30.0%
!! TACTTTCTGACTTGTTCTTT+GGG - chr3_4:41651194-41651213 Msa0500990:intron 30.0%
!!! GACTACCAAGTCATTTTTTA+TGG - chr3_4:41651216-41651235 Msa0500990:CDS 30.0%
CACAAAGATTCATTGATCAA+CGG + chr3_4:41651363-41651382 None:intergenic 30.0%
TCATCAAAACATCTCTTTGG+CGG + chr3_4:41645239-41645258 None:intergenic 35.0%
TTACGGTTGTATACCATTTC+AGG + chr3_4:41645305-41645324 None:intergenic 35.0%
ATCATTCAGAATGAGCAACT+TGG - chr3_4:41645450-41645469 Msa0500990:intron 35.0%
TCATTCAGAATGAGCAACTT+GGG - chr3_4:41645451-41645470 Msa0500990:intron 35.0%
! TTTTCTACAAATTTGGCAGG+AGG - chr3_4:41645626-41645645 Msa0500990:CDS 35.0%
GTTCCTAAGTCCTATAATAC+TGG - chr3_4:41645699-41645718 Msa0500990:CDS 35.0%
GCCATAGTAACCAGTATTAT+AGG + chr3_4:41645712-41645731 None:intergenic 35.0%
! AACTTACCTGTTTCTTATGG+TGG - chr3_4:41645837-41645856 Msa0500990:intron 35.0%
GTTGCTAATTGATCTGATGT+TGG + chr3_4:41645877-41645896 None:intergenic 35.0%
ACATACAGTTATTTGCGTGT+TGG + chr3_4:41645911-41645930 None:intergenic 35.0%
ACTTGAATCTTCAGATTGGA+GGG + chr3_4:41646100-41646119 None:intergenic 35.0%
AACTTGAATCTTCAGATTGG+AGG + chr3_4:41646101-41646120 None:intergenic 35.0%
! TTCTGAAAATCCAACTTCTG+TGG + chr3_4:41646180-41646199 None:intergenic 35.0%
!! ACCATCCAAGTTTTGATCAA+TGG - chr3_4:41646316-41646335 Msa0500990:intron 35.0%
TCCATTGATCAAAACTTGGA+TGG + chr3_4:41646320-41646339 None:intergenic 35.0%
! TGATCAATGGAATAATGGGA+TGG - chr3_4:41646329-41646348 Msa0500990:intron 35.0%
GGATGTGGTTGAAAAGAATA+AGG + chr3_4:41646360-41646379 None:intergenic 35.0%
TCTCCATTATGAGAGTAATG+TGG - chr3_4:41646413-41646432 Msa0500990:intron 35.0%
GTTCCACATTACTCTCATAA+TGG + chr3_4:41646419-41646438 None:intergenic 35.0%
ATGGATCCTATTCCTACTAA+TGG - chr3_4:41646603-41646622 Msa0500990:intron 35.0%
TGTATATCCTCTCCATTAGT+AGG + chr3_4:41646618-41646637 None:intergenic 35.0%
ACTAATGGAGAGGATATACA+AGG - chr3_4:41646618-41646637 Msa0500990:CDS 35.0%
GTCTATCATGCCATAGATTA+GGG + chr3_4:41646901-41646920 None:intergenic 35.0%
AGTCTATCATGCCATAGATT+AGG + chr3_4:41646902-41646921 None:intergenic 35.0%
AAATTGGATTCAACCAAGAG+GGG - chr3_4:41647204-41647223 Msa0500990:CDS 35.0%
TTTGTTTGCTTCTCTTGATC+AGG + chr3_4:41647263-41647282 None:intergenic 35.0%
TAATTGAAAACACTGGAAGG+TGG + chr3_4:41647395-41647414 None:intergenic 35.0%
ATCACGGTAATTGAAAACAC+TGG + chr3_4:41647402-41647421 None:intergenic 35.0%
TCAATTACCGTGATCTGTTT+AGG - chr3_4:41647408-41647427 Msa0500990:intron 35.0%
AGCAATACCTAAACAGATCA+CGG + chr3_4:41647418-41647437 None:intergenic 35.0%
TCCCAGAAAGTTAAGCTATT+TGG - chr3_4:41647465-41647484 Msa0500990:CDS 35.0%
ACACATGCCAATTATGTGAA+AGG - chr3_4:41647702-41647721 Msa0500990:CDS 35.0%
CATGAACAAACAATTGGTAC+TGG + chr3_4:41647746-41647765 None:intergenic 35.0%
CCACAACATGAACAAACAAT+TGG + chr3_4:41647752-41647771 None:intergenic 35.0%
CCAATTGTTTGTTCATGTTG+TGG - chr3_4:41647749-41647768 Msa0500990:CDS 35.0%
! TGTTACAAGACTTCTAAAGG+TGG - chr3_4:41647842-41647861 Msa0500990:CDS 35.0%
! GTTACAAGACTTCTAAAGGT+GGG - chr3_4:41647843-41647862 Msa0500990:CDS 35.0%
GTGGGAAAATCACATTCAAT+GGG - chr3_4:41647861-41647880 Msa0500990:CDS 35.0%
TTCTTCAAGTACTTCATCGT+TGG + chr3_4:41647921-41647940 None:intergenic 35.0%
CTACAACAACAGAAGAGATT+TGG - chr3_4:41648081-41648100 Msa0500990:CDS 35.0%
! TTACTGAAGGCTGCTAATTT+TGG - chr3_4:41648172-41648191 Msa0500990:intron 35.0%
CAAAGTGGGAAAATGTTGAA+GGG - chr3_4:41648272-41648291 Msa0500990:intron 35.0%
GAAGTTTATGTGCATACATG+CGG + chr3_4:41648331-41648350 None:intergenic 35.0%
TTGTAGGTTATAGCTGCAAA+AGG - chr3_4:41648570-41648589 Msa0500990:CDS 35.0%
GAAAGTGAATAAGCAGTTTC+TGG - chr3_4:41648632-41648651 Msa0500990:CDS 35.0%
GATCTATAAGAGAATTCAGC+AGG + chr3_4:41648681-41648700 None:intergenic 35.0%
TAGATCAAGAGTAAGTTCAG+TGG - chr3_4:41648695-41648714 Msa0500990:intron 35.0%
AAGAAGCAATAGGTGGTAAT+TGG + chr3_4:41648745-41648764 None:intergenic 35.0%
! ATAGAAGTTTGCTTGGTTTC+AGG - chr3_4:41648824-41648843 Msa0500990:CDS 35.0%
! GGAGCAGATATATGCATTTT+TGG - chr3_4:41648873-41648892 Msa0500990:CDS 35.0%
!!! CATTTTTGGAATGTATGTCC+AGG - chr3_4:41648887-41648906 Msa0500990:CDS 35.0%
! ATGTATACACAACGCTGATT+CGG + chr3_4:41648936-41648955 None:intergenic 35.0%
CAATATCTCATGGTAAACGA+AGG + chr3_4:41649027-41649046 None:intergenic 35.0%
CTTCGTTTACCATGAGATAT+TGG - chr3_4:41649025-41649044 Msa0500990:CDS 35.0%
!! TTTCCTGACTTGCTACATAT+GGG - chr3_4:41649187-41649206 Msa0500990:intron 35.0%
! TAATCATCCCCTTTTCTTGA+AGG + chr3_4:41649221-41649240 None:intergenic 35.0%
! TTTTATGTGTCTGTGTGTGT+TGG - chr3_4:41649316-41649335 Msa0500990:intron 35.0%
!!! GGGCTAGTTTTTGAAAACAA+AGG + chr3_4:41649407-41649426 None:intergenic 35.0%
TAAATATTCAGTGGTTGGCA+GGG + chr3_4:41649427-41649446 None:intergenic 35.0%
ATAAATATTCAGTGGTTGGC+AGG + chr3_4:41649428-41649447 None:intergenic 35.0%
!!! ACACTCTTTTTCAATGGTCT+TGG + chr3_4:41649635-41649654 None:intergenic 35.0%
AAGACCATTGAAAAAGAGTG+TGG - chr3_4:41649634-41649653 Msa0500990:CDS 35.0%
TCGCATCACTAAAATGTCTT+TGG + chr3_4:41649746-41649765 None:intergenic 35.0%
CACTACAAATGGAAAAAACG+TGG + chr3_4:41649798-41649817 None:intergenic 35.0%
ATTGGGGGGAATAAAAGAAA+AGG + chr3_4:41649948-41649967 None:intergenic 35.0%
TATTCCCCCCAATTTCTATT+AGG - chr3_4:41649955-41649974 Msa0500990:CDS 35.0%
TGGCCAACCTAATAGAAATT+GGG + chr3_4:41649965-41649984 None:intergenic 35.0%
TTGGCCAACCTAATAGAAAT+TGG + chr3_4:41649966-41649985 None:intergenic 35.0%
CATATTGCAAGTGAGCTATA+AGG + chr3_4:41650015-41650034 None:intergenic 35.0%
! TTGAACTGTGTTCCATTTTC+AGG - chr3_4:41650374-41650393 Msa0500990:CDS 35.0%
! CATTATGTTTAGTGTTGGAG+GGG + chr3_4:41650416-41650435 None:intergenic 35.0%
TTTACAACAGTCATCAGAGT+AGG + chr3_4:41650573-41650592 None:intergenic 35.0%
ACAATGTATTCCAAAAGAGC+TGG - chr3_4:41650616-41650635 Msa0500990:CDS 35.0%
TTTGAGTCAACTTGTGTTCA+TGG + chr3_4:41650707-41650726 None:intergenic 35.0%
TCAAGACCGATATATCAATC+TGG - chr3_4:41650774-41650793 Msa0500990:intron 35.0%
CAAGACCGATATATCAATCT+GGG - chr3_4:41650775-41650794 Msa0500990:intron 35.0%
GATATATCAATCTGGGAATC+AGG - chr3_4:41650782-41650801 Msa0500990:intron 35.0%
TCAGGAGTCAAATGAGAAAA+TGG - chr3_4:41650800-41650819 Msa0500990:intron 35.0%
! ACCATATCTTTTTACACTGC+TGG + chr3_4:41651056-41651075 None:intergenic 35.0%
!! CTACTTTCTGACTTGTTCTT+TGG - chr3_4:41651193-41651212 Msa0500990:intron 35.0%
GAGTTCACAGTTCAAATAGT+TGG - chr3_4:41651389-41651408 Msa0500990:CDS 35.0%
! TTTGCCAAGGGTTTTCATCT+TGG - chr3_4:41645158-41645177 Msa0500990:three_prime_UTR 40.0%
! ACTTACCAATGCTGCTTCAA+AGG - chr3_4:41645494-41645513 Msa0500990:intron 40.0%
!! ACAAACCTTTGAAGCAGCAT+TGG + chr3_4:41645502-41645521 None:intergenic 40.0%
GTACTTTAATGCTCAGACAC+AGG + chr3_4:41645532-41645551 None:intergenic 40.0%
TTGCTTCCACCATAAGAAAC+AGG + chr3_4:41645846-41645865 None:intergenic 40.0%
! TTCTTATGGTGGAAGCAATC+TGG - chr3_4:41645848-41645867 Msa0500990:intron 40.0%
GCAATATCAACCACAGAAGT+TGG - chr3_4:41646167-41646186 Msa0500990:CDS 40.0%
!!! TATTTTGGCAGGTCGTAGTA+TGG + chr3_4:41646256-41646275 None:intergenic 40.0%
! GAATGTTGCACTTTTGGATG+TGG + chr3_4:41646375-41646394 None:intergenic 40.0%
! TCATAATGGAGAGAAGAGAG+GGG + chr3_4:41646405-41646424 None:intergenic 40.0%
! CTCATAATGGAGAGAAGAGA+GGG + chr3_4:41646406-41646425 None:intergenic 40.0%
! TCTCATAATGGAGAGAAGAG+AGG + chr3_4:41646407-41646426 None:intergenic 40.0%
ACTCCCGCAGAATGAAAAAT+TGG + chr3_4:41646453-41646472 None:intergenic 40.0%
! TTTTCATTCTGCGGGAGTTA+AGG - chr3_4:41646455-41646474 Msa0500990:CDS 40.0%
TTTCATTCTGCGGGAGTTAA+GGG - chr3_4:41646456-41646475 Msa0500990:CDS 40.0%
GGGGATAAACACCAATGTAA+TGG - chr3_4:41646476-41646495 Msa0500990:intron 40.0%
TTGATACATTTGGACAGCCA+GGG - chr3_4:41646499-41646518 Msa0500990:intron 40.0%
GCTTGAAAGCTATGATGTGA+TGG - chr3_4:41646521-41646540 Msa0500990:intron 40.0%
TTGTCACGGGTATAAAATCC+AGG - chr3_4:41646565-41646584 Msa0500990:intron 40.0%
TCCTATTCCTACTAATGGAG+AGG - chr3_4:41646608-41646627 Msa0500990:intron 40.0%
TCCTCTCCATTAGTAGGAAT+AGG + chr3_4:41646612-41646631 None:intergenic 40.0%
GGCAGAACTAAATTTGACCA+CGG - chr3_4:41646639-41646658 Msa0500990:CDS 40.0%
TGGAATTTAATCTGATGCCG+TGG + chr3_4:41646659-41646678 None:intergenic 40.0%
!!! TAGCTCATCGGCTTTCTTTT+TGG + chr3_4:41646733-41646752 None:intergenic 40.0%
TCCTCAGTTACAACTGTTAG+TGG - chr3_4:41646780-41646799 Msa0500990:intron 40.0%
CCTCAGTTACAACTGTTAGT+GGG - chr3_4:41646781-41646800 Msa0500990:intron 40.0%
ATGCCATAGATTAGGGAATC+TGG + chr3_4:41646894-41646913 None:intergenic 40.0%
GATCAACTTCCACTGAGTTT+CGG + chr3_4:41646926-41646945 None:intergenic 40.0%
! TGATGGTGATGATGATGAAG+AGG - chr3_4:41646968-41646987 Msa0500990:CDS 40.0%
GATGATGAAGAGGACATACA+AGG - chr3_4:41646978-41646997 Msa0500990:CDS 40.0%
GAGGACATACAAGGAAGAAT+TGG - chr3_4:41646987-41647006 Msa0500990:CDS 40.0%
AAGAATTGGATTCAACCACG+AGG - chr3_4:41647001-41647020 Msa0500990:CDS 40.0%
AGAATTGGATTCAACCACGA+GGG - chr3_4:41647002-41647021 Msa0500990:CDS 40.0%
GACAGACAGTTGCAAATCAA+TGG - chr3_4:41647097-41647116 Msa0500990:CDS 40.0%
TTGATCAGGTGTTAGTTCAC+TGG + chr3_4:41647249-41647268 None:intergenic 40.0%
TCTCAGAAAGGAATCTGTTC+TGG - chr3_4:41647361-41647380 Msa0500990:intron 40.0%
CGGTAATTGAAAACACTGGA+AGG + chr3_4:41647398-41647417 None:intergenic 40.0%
!! GCTTAACTTTCTGGGATAGT+TGG + chr3_4:41647461-41647480 None:intergenic 40.0%
! AACACAGATTACTTCTGAGG+AGG - chr3_4:41647661-41647680 Msa0500990:intron 40.0%
GGTGGGAAAATCACATTCAA+TGG - chr3_4:41647860-41647879 Msa0500990:CDS 40.0%
! CGATGAAGTACTTGAAGAAC+CGG - chr3_4:41647922-41647941 Msa0500990:intron 40.0%
ACACAACAGTCGTAAAGAGT+TGG + chr3_4:41648003-41648022 None:intergenic 40.0%
GACTGTTGTGTTCTTCTAGT+GGG - chr3_4:41648012-41648031 Msa0500990:intron 40.0%
! ATTTCTTTTGAGCGGCATAC+AGG + chr3_4:41648130-41648149 None:intergenic 40.0%
AAAGCATGCTCACTTACTGA+AGG - chr3_4:41648159-41648178 Msa0500990:intron 40.0%
TTCTAAGTGGTCACTTAGCA+CGG + chr3_4:41648218-41648237 None:intergenic 40.0%
GCAAAGTGGGAAAATGTTGA+AGG - chr3_4:41648271-41648290 Msa0500990:intron 40.0%
AGGGAACGAGAATCTTGATA+AGG - chr3_4:41648291-41648310 Msa0500990:intron 40.0%
! GTTTCTGGATATCATTCCAG+AGG - chr3_4:41648647-41648666 Msa0500990:CDS 40.0%
AGTTCAGAAGAAGCAATAGG+TGG + chr3_4:41648752-41648771 None:intergenic 40.0%
CTTCTGTTTCAGCAGATTGA+AGG - chr3_4:41648852-41648871 Msa0500990:CDS 40.0%
! ATGGTAAACGAAGGTACGAA+GGG + chr3_4:41649018-41649037 None:intergenic 40.0%
!! GTTTCCTGACTTGCTACATA+TGG - chr3_4:41649186-41649205 Msa0500990:intron 40.0%
! TTCGGAGTCTTTTGCTCTTT+GGG + chr3_4:41649260-41649279 None:intergenic 40.0%
AAGAGAAAGAAACTGACCAC+CGG + chr3_4:41649298-41649317 None:intergenic 40.0%
TTCTTTGTTGCTGCTGAGAA+AGG - chr3_4:41649535-41649554 Msa0500990:CDS 40.0%
TCTTTGTTGCTGCTGAGAAA+GGG - chr3_4:41649536-41649555 Msa0500990:CDS 40.0%
TCTCGTTTGCCATACTTTGA+TGG - chr3_4:41649577-41649596 Msa0500990:CDS 40.0%
! ACCATTGAAAAAGAGTGTGG+AGG - chr3_4:41649637-41649656 Msa0500990:CDS 40.0%
!!! TCCTCCACACTCTTTTTCAA+TGG + chr3_4:41649641-41649660 None:intergenic 40.0%
AATGTCTTTGGCAGTGTCTT+TGG + chr3_4:41649734-41649753 None:intergenic 40.0%
ACGTGGATGAAAGTAAGACA+AGG + chr3_4:41649781-41649800 None:intergenic 40.0%
CCAACCTAATAGAAATTGGG+GGG + chr3_4:41649962-41649981 None:intergenic 40.0%
GCCAACCTAATAGAAATTGG+GGG + chr3_4:41649963-41649982 None:intergenic 40.0%
GGCCAACCTAATAGAAATTG+GGG + chr3_4:41649964-41649983 None:intergenic 40.0%
CCAAAATATATGGCCTACCA+GGG - chr3_4:41649982-41650001 Msa0500990:CDS 40.0%
! ATAAGGAAGTTTTCCCTGGT+AGG + chr3_4:41649998-41650017 None:intergenic 40.0%
! AGCTATAAGGAAGTTTTCCC+TGG + chr3_4:41650002-41650021 None:intergenic 40.0%
!! ATGGTTTTGCACTGAATGCA+AGG - chr3_4:41650075-41650094 Msa0500990:CDS 40.0%
CACTGAATGCAAGGAAATTC+AGG - chr3_4:41650084-41650103 Msa0500990:CDS 40.0%
CAAACTGAAACTGAGACTTC+TGG + chr3_4:41650494-41650513 None:intergenic 40.0%
TAGGATTGTGTAGATGGTAG+AGG + chr3_4:41650554-41650573 None:intergenic 40.0%
TCAGAGTAGGATTGTGTAGA+TGG + chr3_4:41650560-41650579 None:intergenic 40.0%
! TCTCACATTTCCAGCTCTTT+TGG + chr3_4:41650629-41650648 None:intergenic 40.0%
CTTATAGCATGCAGAGCAAA+TGG + chr3_4:41650667-41650686 None:intergenic 40.0%
CATTTGCTCTGCATGCTATA+AGG - chr3_4:41650665-41650684 Msa0500990:CDS 40.0%
TCTGCATGCTATAAGGATAG+AGG - chr3_4:41650672-41650691 Msa0500990:intron 40.0%
TTCACCATCTGTGTGTAAGT+CGG + chr3_4:41650898-41650917 None:intergenic 40.0%
GCCAGCAGTGTAAAAAGATA+TGG - chr3_4:41651052-41651071 Msa0500990:CDS 40.0%
! TTATACTTGCTGCTCACTCT+AGG - chr3_4:41651076-41651095 Msa0500990:intron 40.0%
! CTCTAGGAATTGCAAAGACT+TGG - chr3_4:41651092-41651111 Msa0500990:intron 40.0%
! CCAAGGGTTTTCATCTTGGT+GGG - chr3_4:41645162-41645181 Msa0500990:three_prime_UTR 45.0%
!! TTCATCTTGGTGGGAGTACT+TGG - chr3_4:41645171-41645190 Msa0500990:three_prime_UTR 45.0%
AAGTAGGATTCTCCTCAGAC+TGG - chr3_4:41645270-41645289 Msa0500990:three_prime_UTR 45.0%
AGTAGCAATATTTCCAGCGC+AGG + chr3_4:41645477-41645496 None:intergenic 45.0%
TTAATGCTCAGACACAGGTC+AGG + chr3_4:41645527-41645546 None:intergenic 45.0%
GCAGGAGGAATATATGAACC+TGG - chr3_4:41645641-41645660 Msa0500990:CDS 45.0%
GGCAGGTTATGAGCAATAGA+AGG + chr3_4:41645759-41645778 None:intergenic 45.0%
!!! CATAACCTGCCTTGTTTTCC+TGG - chr3_4:41645768-41645787 Msa0500990:CDS 45.0%
GAACCATCACCAGGAAAACA+AGG + chr3_4:41645780-41645799 None:intergenic 45.0%
TATCCCTCCAGTTGCTGATA+TGG - chr3_4:41645803-41645822 Msa0500990:intron 45.0%
CATCCATATCAGCAACTGGA+GGG + chr3_4:41645809-41645828 None:intergenic 45.0%
ACATCCATATCAGCAACTGG+AGG + chr3_4:41645810-41645829 None:intergenic 45.0%
AGCACATCCATATCAGCAAC+TGG + chr3_4:41645813-41645832 None:intergenic 45.0%
ATCTCCACTGCAAAAAGCAG+AGG + chr3_4:41646030-41646049 None:intergenic 45.0%
!!! TCTGCTTTTTGCAGTGGAGA+TGG - chr3_4:41646029-41646048 Msa0500990:CDS 45.0%
AGGGATCTTCCCATTGTAGT+AGG + chr3_4:41646081-41646100 None:intergenic 45.0%
TATGTCCTCTCAATCTGCCT+CGG - chr3_4:41646122-41646141 Msa0500990:CDS 45.0%
ATCTGCCTCGGTGAATACTT+CGG - chr3_4:41646134-41646153 Msa0500990:CDS 45.0%
! ATCTTCCGAAGTATTCACCG+AGG + chr3_4:41646142-41646161 None:intergenic 45.0%
TTCATTCTGCGGGAGTTAAG+GGG - chr3_4:41646457-41646476 Msa0500990:intron 45.0%
GTTGATACATTTGGACAGCC+AGG - chr3_4:41646498-41646517 Msa0500990:intron 45.0%
ACATCATAGCTTTCAAGCCC+TGG + chr3_4:41646519-41646538 None:intergenic 45.0%
AGCCTATTCCTACTGCATTC+TGG - chr3_4:41646700-41646719 Msa0500990:CDS 45.0%
GTCCAGAATGCAGTAGGAAT+AGG + chr3_4:41646705-41646724 None:intergenic 45.0%
GCATTTGTCCAGAATGCAGT+AGG + chr3_4:41646711-41646730 None:intergenic 45.0%
CCCACTAACAGTTGTAACTG+AGG + chr3_4:41646784-41646803 None:intergenic 45.0%
CCTTTCGAGGGAATCAGTTT+AGG + chr3_4:41646843-41646862 None:intergenic 45.0%
! CCTAAACTGATTCCCTCGAA+AGG - chr3_4:41646840-41646859 Msa0500990:intron 45.0%
GAGCCAGATTCCCTAATCTA+TGG - chr3_4:41646888-41646907 Msa0500990:intron 45.0%
GAATTGGATTCAACCACGAG+GGG - chr3_4:41647003-41647022 Msa0500990:CDS 45.0%
TATGCCTGCTCTCATAAGCA+AGG - chr3_4:41647145-41647164 Msa0500990:CDS 45.0%
! ATTACTTCTGAGGAGGAAGC+AGG - chr3_4:41647668-41647687 Msa0500990:intron 45.0%
! TTACTTCTGAGGAGGAAGCA+GGG - chr3_4:41647669-41647688 Msa0500990:intron 45.0%
CGACTGTTGTGTTCTTCTAG+TGG - chr3_4:41648011-41648030 Msa0500990:intron 45.0%
TGTTGTGTTCTTCTAGTGGG+TGG - chr3_4:41648015-41648034 Msa0500990:intron 45.0%
!!! GGCTGCTAATTTTGGTGCTA+AGG - chr3_4:41648180-41648199 Msa0500990:intron 45.0%
TCATGCAAGAGAGAGCAAAG+TGG - chr3_4:41648257-41648276 Msa0500990:intron 45.0%
CATGCAAGAGAGAGCAAAGT+GGG - chr3_4:41648258-41648277 Msa0500990:intron 45.0%
GTGCATACATGCGGATTTCT+CGG + chr3_4:41648322-41648341 None:intergenic 45.0%
GGAATGTATGTCCAGGAGTT+TGG - chr3_4:41648894-41648913 Msa0500990:CDS 45.0%
CCACTCTTTGTCCTTCTTTC+AGG + chr3_4:41648990-41649009 None:intergenic 45.0%
CCTGAAAGAAGGACAAAGAG+TGG - chr3_4:41648987-41649006 Msa0500990:CDS 45.0%
! CATGGTAAACGAAGGTACGA+AGG + chr3_4:41649019-41649038 None:intergenic 45.0%
CCTGTGCTCCTTCAAGAAAA+GGG - chr3_4:41649210-41649229 Msa0500990:intron 45.0%
CTGTGCTCCTTCAAGAAAAG+GGG - chr3_4:41649211-41649230 Msa0500990:intron 45.0%
! TCGGAGTCTTTTGCTCTTTG+GGG + chr3_4:41649259-41649278 None:intergenic 45.0%
! CTTCGGAGTCTTTTGCTCTT+TGG + chr3_4:41649261-41649280 None:intergenic 45.0%
CGGCGTAGCTTATCATTCTT+CGG + chr3_4:41649278-41649297 None:intergenic 45.0%
CGAAGAATGATAAGCTACGC+CGG - chr3_4:41649276-41649295 Msa0500990:intron 45.0%
CTTTGTTGCTGCTGAGAAAG+GGG - chr3_4:41649537-41649556 Msa0500990:CDS 45.0%
CAGCAGTCTCCATCAAAGTA+TGG + chr3_4:41649589-41649608 None:intergenic 45.0%
CATACTTTGATGGAGACTGC+TGG - chr3_4:41649587-41649606 Msa0500990:CDS 45.0%
TCTTTGGCAGTGTCTTTGGA+AGG + chr3_4:41649730-41649749 None:intergenic 45.0%
CCCCCCAATTTCTATTAGGT+TGG - chr3_4:41649959-41649978 Msa0500990:CDS 45.0%
GCCAAAATATATGGCCTACC+AGG - chr3_4:41649981-41650000 Msa0500990:CDS 45.0%
! CCCTGGTAGGCCATATATTT+TGG + chr3_4:41649985-41650004 None:intergenic 45.0%
TCCCAGACACTATCACTTCA+CGG + chr3_4:41650051-41650070 None:intergenic 45.0%
! AGGAAATTCAGGAGTGCGAA+AGG - chr3_4:41650095-41650114 Msa0500990:CDS 45.0%
GCAACTCGCCATTCTTTGAA+GGG + chr3_4:41650278-41650297 None:intergenic 45.0%
TGCAACTCGCCATTCTTTGA+AGG + chr3_4:41650279-41650298 None:intergenic 45.0%
CGAGTTGCATACACTTTGTC+AGG - chr3_4:41650290-41650309 Msa0500990:CDS 45.0%
CATCAACAACGGCCTGAAAA+TGG + chr3_4:41650389-41650408 None:intergenic 45.0%
GGAGGGGATATCATCAACAA+CGG + chr3_4:41650400-41650419 None:intergenic 45.0%
TGCCAAGTATTCCTCGATGA+TGG - chr3_4:41650527-41650546 Msa0500990:CDS 45.0%
GACCATCATCGAGGAATACT+TGG + chr3_4:41650532-41650551 None:intergenic 45.0%
AAGGTTCAGCATTAGCTGCA+CGG + chr3_4:41650954-41650973 None:intergenic 45.0%
GGTGCGAAATTCGAGTGAAT+CGG - chr3_4:41651025-41651044 Msa0500990:CDS 45.0%
GTGCGAAATTCGAGTGAATC+GGG - chr3_4:41651026-41651045 Msa0500990:CDS 45.0%
TGCGAAATTCGAGTGAATCG+GGG - chr3_4:41651027-41651046 Msa0500990:CDS 45.0%
ACTTGGAGTGTAGCATTCCA+CGG - chr3_4:41651109-41651128 Msa0500990:intron 45.0%
!! TATATATATATATATATGTT+TGG - chr3_4:41648504-41648523 Msa0500990:CDS 5.0%
! GCCAAGGGTTTTCATCTTGG+TGG - chr3_4:41645161-41645180 Msa0500990:three_prime_UTR 50.0%
CCCACCAAGATGAAAACCCT+TGG + chr3_4:41645165-41645184 None:intergenic 50.0%
TAGGATTCTCCTCAGACTGG+CGG - chr3_4:41645273-41645292 Msa0500990:three_prime_UTR 50.0%
CTGGCGGTATCATCCTGAAA+TGG - chr3_4:41645289-41645308 Msa0500990:three_prime_UTR 50.0%
!! CACGCTGATTCAATGTCTCC+AGG + chr3_4:41645662-41645681 None:intergenic 50.0%
TTACTATGGCGTGCCAGAAG+CGG - chr3_4:41645722-41645741 Msa0500990:CDS 50.0%
GGATGAGATATTCCCGCTTC+TGG + chr3_4:41645738-41645757 None:intergenic 50.0%
CATCACCAGGAAAACAAGGC+AGG + chr3_4:41645776-41645795 None:intergenic 50.0%
!!! CTGCCTTGTTTTCCTGGTGA+TGG - chr3_4:41645774-41645793 Msa0500990:CDS 50.0%
GGGATAGATGAACCATCACC+AGG + chr3_4:41645789-41645808 None:intergenic 50.0%
!!! TCCTCCTCTGCTTTTTGCAG+TGG - chr3_4:41646023-41646042 Msa0500990:CDS 50.0%
TCCACTGCAAAAAGCAGAGG+AGG + chr3_4:41646027-41646046 None:intergenic 50.0%
ATTCACCGAGGCAGATTGAG+AGG + chr3_4:41646130-41646149 None:intergenic 50.0%
CATGTCGAGACATTGCATCC+TGG + chr3_4:41646586-41646605 None:intergenic 50.0%
CAGGATGCAATGTCTCGACA+TGG - chr3_4:41646584-41646603 Msa0500990:intron 50.0%
CTTGGTGAGAGTAGGCATAC+TGG + chr3_4:41646679-41646698 None:intergenic 50.0%
CAGTATGCCTACTCTCACCA+AGG - chr3_4:41646677-41646696 Msa0500990:CDS 50.0%
ATAGGCTCCTTGGTGAGAGT+AGG + chr3_4:41646687-41646706 None:intergenic 50.0%
TGCAGTAGGAATAGGCTCCT+TGG + chr3_4:41646697-41646716 None:intergenic 50.0%
CCAGCTTCTAAGCCTTTCGA+GGG + chr3_4:41646855-41646874 None:intergenic 50.0%
ACCAGCTTCTAAGCCTTTCG+AGG + chr3_4:41646856-41646875 None:intergenic 50.0%
GATAGACTGCCGAAACTCAG+TGG - chr3_4:41646914-41646933 Msa0500990:intron 50.0%
TGCAACTGTCTGTCACGACA+TGG + chr3_4:41647091-41647110 None:intergenic 50.0%
GCAACCTTGCTTATGAGAGC+AGG + chr3_4:41647152-41647171 None:intergenic 50.0%
CTTTAGCATCTGTCCCCTCT+TGG + chr3_4:41647220-41647239 None:intergenic 50.0%
TGGTCACTTAGCACGGTTCT+TGG + chr3_4:41648211-41648230 None:intergenic 50.0%
TCAGCAGGGTAATTCTCCTC+TGG + chr3_4:41648666-41648685 None:intergenic 50.0%
!! CAGGAGTTTGGCTCTGAATG+CGG - chr3_4:41648906-41648925 Msa0500990:CDS 50.0%
AGGCCCATATGTAGCAAGTC+AGG + chr3_4:41649193-41649212 None:intergenic 50.0%
GCCTGTGCTCCTTCAAGAAA+AGG - chr3_4:41649209-41649228 Msa0500990:intron 50.0%
!! CCCTTTTCTTGAAGGAGCAC+AGG + chr3_4:41649213-41649232 None:intergenic 50.0%
!! GAGTCTTTTGCTCTTTGGGG+TGG + chr3_4:41649256-41649275 None:intergenic 50.0%
AGAATGATAAGCTACGCCGG+TGG - chr3_4:41649279-41649298 Msa0500990:intron 50.0%
CAAACGAGAAGCTGTCACCT+TGG + chr3_4:41649566-41649585 None:intergenic 50.0%
TTTGATGGAGACTGCTGGTC+TGG - chr3_4:41649592-41649611 Msa0500990:CDS 50.0%
! CTGCTGGTCTGGTAATGCTA+TGG - chr3_4:41649603-41649622 Msa0500990:CDS 50.0%
! GGCAGTGTCTTTGGAAGGAT+TGG + chr3_4:41649725-41649744 None:intergenic 50.0%
! TGCCGTGAAGTGATAGTGTC+TGG - chr3_4:41650046-41650065 Msa0500990:CDS 50.0%
! GCCGTGAAGTGATAGTGTCT+GGG - chr3_4:41650047-41650066 Msa0500990:CDS 50.0%
! TGATAGTGTCTGGGAAGCGA+TGG - chr3_4:41650056-41650075 Msa0500990:CDS 50.0%
! AAGGGTGCGCATCAGAACTA+TGG + chr3_4:41650260-41650279 None:intergenic 50.0%
GATGCGCACCCTTCAAAGAA+TGG - chr3_4:41650267-41650286 Msa0500990:CDS 50.0%
TCGAGGAATACTTGGCACGA+CGG + chr3_4:41650524-41650543 None:intergenic 50.0%
ATGGTAGAGGACCATCATCG+AGG + chr3_4:41650541-41650560 None:intergenic 50.0%
GCAGAGCAAATGGTACACTC+TGG + chr3_4:41650657-41650676 None:intergenic 50.0%
!! CTTGCCGACTTACACACAGA+TGG - chr3_4:41650891-41650910 Msa0500990:CDS 50.0%
GAACAGTTTGGGTGAGAGCA+AGG + chr3_4:41650973-41650992 None:intergenic 50.0%
AGCTGTTCTCTCATGCCAGT+AGG - chr3_4:41651004-41651023 Msa0500990:CDS 50.0%
CACTCGAATTTCGCACCTAC+TGG + chr3_4:41651022-41651041 None:intergenic 50.0%
ATAACAACACACCTGCACCG+TGG + chr3_4:41651129-41651148 None:intergenic 50.0%
AGGATGATACCGCCAGTCTG+AGG + chr3_4:41645285-41645304 None:intergenic 55.0%
TCAGCGTGTGCAAGCTCTAC+TGG - chr3_4:41645674-41645693 Msa0500990:CDS 55.0%
CAGCGTGTGCAAGCTCTACT+GGG - chr3_4:41645675-41645694 Msa0500990:CDS 55.0%
TACTATGGCGTGCCAGAAGC+GGG - chr3_4:41645723-41645742 Msa0500990:CDS 55.0%
CCCTCGAAAGGCTTAGAAGC+TGG - chr3_4:41646852-41646871 Msa0500990:intron 55.0%
CGCATTCAGAGCCAAACTCC+TGG + chr3_4:41648908-41648927 None:intergenic 55.0%
TGCTGAGAAAGGGGACTCCA+AGG - chr3_4:41649546-41649565 Msa0500990:CDS 55.0%
! GGAAGGATTGGCATGTCCCA+TGG + chr3_4:41649713-41649732 None:intergenic 55.0%
AGTGTAGCATTCCACGGTGC+AGG - chr3_4:41651115-41651134 Msa0500990:intron 55.0%
CTTTAGCGTCTGTCCCCTCG+TGG + chr3_4:41647019-41647038 None:intergenic 60.0%
TGAGCAACTTGGGCCTGCGC+TGG - chr3_4:41645461-41645480 Msa0500990:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 41645155 41651574 41645155 ID=Msa0500990;Name=Msa0500990
chr3_4 mRNA 41645155 41651574 41645155 ID=Msa0500990-mRNA-1;Parent=Msa0500990;Name=Msa0500990-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.64|0.6|1|1|1|15|191|1381
chr3_4 exon 41645155 41645427 41645155 ID=Msa0500990-mRNA-1:exon:8749;Parent=Msa0500990-mRNA-1
chr3_4 exon 41645593 41645819 41645593 ID=Msa0500990-mRNA-1:exon:8748;Parent=Msa0500990-mRNA-1
chr3_4 exon 41645908 41646333 41645908 ID=Msa0500990-mRNA-1:exon:8747;Parent=Msa0500990-mRNA-1
chr3_4 exon 41646418 41646475 41646418 ID=Msa0500990-mRNA-1:exon:8746;Parent=Msa0500990-mRNA-1
chr3_4 exon 41646613 41646752 41646613 ID=Msa0500990-mRNA-1:exon:8745;Parent=Msa0500990-mRNA-1
chr3_4 exon 41646961 41647264 41646961 ID=Msa0500990-mRNA-1:exon:8744;Parent=Msa0500990-mRNA-1
chr3_4 exon 41647429 41647574 41647429 ID=Msa0500990-mRNA-1:exon:8743;Parent=Msa0500990-mRNA-1
chr3_4 exon 41647683 41647883 41647683 ID=Msa0500990-mRNA-1:exon:8742;Parent=Msa0500990-mRNA-1
chr3_4 exon 41648025 41648153 41648025 ID=Msa0500990-mRNA-1:exon:8741;Parent=Msa0500990-mRNA-1
chr3_4 exon 41648417 41648698 41648417 ID=Msa0500990-mRNA-1:exon:8740;Parent=Msa0500990-mRNA-1
chr3_4 exon 41648786 41649061 41648786 ID=Msa0500990-mRNA-1:exon:8739;Parent=Msa0500990-mRNA-1
chr3_4 exon 41649353 41650686 41649353 ID=Msa0500990-mRNA-1:exon:8738;Parent=Msa0500990-mRNA-1
chr3_4 exon 41650805 41651084 41650805 ID=Msa0500990-mRNA-1:exon:8737;Parent=Msa0500990-mRNA-1
chr3_4 exon 41651214 41651286 41651214 ID=Msa0500990-mRNA-1:exon:8736;Parent=Msa0500990-mRNA-1
chr3_4 exon 41651387 41651574 41651387 ID=Msa0500990-mRNA-1:exon:8735;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41651387 41651574 41651387 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41651214 41651286 41651214 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41650805 41651084 41650805 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41649353 41650686 41649353 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41648786 41649061 41648786 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41648417 41648698 41648417 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41648025 41648153 41648025 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41647683 41647883 41647683 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41647429 41647574 41647429 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41646961 41647264 41646961 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41646613 41646752 41646613 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41646418 41646475 41646418 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41645908 41646333 41645908 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41645593 41645819 41645593 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 CDS 41645346 41645427 41645346 ID=Msa0500990-mRNA-1:cds;Parent=Msa0500990-mRNA-1
chr3_4 three_prime_UTR 41645155 41645345 41645155 ID=Msa0500990-mRNA-1:three_prime_utr;Parent=Msa0500990-mRNA-1
Gene Sequence

>Msa0500990

ATGTTTGCCAAGGGTTTTCATCTTGGTGGGAGTACTTGGAGAGATATACCAAGAAATTCTTCATCAGTTTTCTCGAACATTCCGCCAAAGAGATGTTTTGATGAATTAAGCAATCAAGTAGGATTCTCCTCAGACTGGCGGTATCATCCTGAAATGGTATACAACCGTAATTGGATAAGAAGAAAAATTTTTGAAATCATTCAGAATGAGCAACTTGGGCCTGCGCTGGAAATATTGCTACTTACCAATGCTGCTTCAAAGGAGGAATATATGAACCTGGAGACATTGAATCAGCGTGTGCAAGCTCTACTGGGTGTTCCTAAGTCCTATAATACTGGTTACTATGGCGTGCCAGAAGCGGGAATATCTCATCCTTCTATTGCTCATAACCTGCCTTGTTTTCCTGGTGATGGTTCATCTATCCCTCCAGTTGCTGATATGGATGTGCTTTGTAACTTACCTGTTTCTTATGGTGGAAGCAATCTGGATGCCAACATCAGATCAATTAGCAACTATTTTTCTCACCAACACGCAAATAACTTGGAGATGGATCTGACAAAATACAAAGATTTTTTTCCTACTACAATGGGAAGATCCCTCCAATCTGAAGATTCAAGTTTTATGTCCTCTCAATCTGCCTCGGTGAATACTTCGGAAGATACAATGCAATATCAACCACAGAAGTTGGATTTTCAGAAGAATTCCACTGTTAGACATGTTGTTAATGATGTCCCTTCTGATAATACTGAATCCATACTACGACCTGCCAAAATACAGAAAATGATGGATTCAGGTTTTGGTGTATCTTCGACTAACCATCCAAGTTTTGATCAATGGAATAATGGGATGGTTCAACCTTATTCTTTTCAACCACATCCAAAAGTGCAACATTCAGAATTTCCCCTCTCTTCTCTCCATTATGAGAGTAATGTGGAACAAATTACAAATCCAATTTTTCATTCTGCGGGAGTTAAGGGGATAAACACCAATGTAATGGTTGATACATTTGGACAGCCAGGGCTTGAAAGCTATGATGTGATGGATAGCAACAATTTAAACAATATTGTCACGGGTATAAAATCCAGGATGCAATGTCTCGACATGGATCCTATTCCTACTAATGGAGAGGATATACAAGGCAGAACTAAATTTGACCACGGCATCAGATTAAATTCCAGTATGCCTACTCTCACCAAGGAGCCTATTCCTACTGCATTCTGGACAAATGCCAAAAAGAAAGCCGATGAGCTAACATTTGATCAAGAGAAGCTAACAAAGTCCTCAGTTACAACTGTTAGTGGGAAAACGAACTACGTGATTTATGATTTGACTTCTGAGCCTAAACTGATTCCCTCGAAAGGCTTAGAAGCTGGTCGAATATCATATGAGCCAGATTCCCTAATCTATGGCATGATAGACTGCCGAAACTCAGTGGAAGTTGATCGTGTCCCAGAACTTATTACAATTGATGGTGATGATGATGAAGAGGACATACAAGGAAGAATTGGATTCAACCACGAGGGGACAGACGCTAAAGAGAAAGTGAGTGAACCAAAAGTTGATCAAGAGAAGAAAGATCTTGAAAGCCATGTCGTGACAGACAGTTGCAAATCAATGGAAATTGACATTGGGTCGAATTCGAATATGCCTGCTCTCATAAGCAAGGTTGCTATTCTTATTGATGTAGATGACAAACAAAATAAAATTGGATTCAACCAAGAGGGGACAGATGCTAAAGAGAAAGCCAGTGAACTAACACCTGATCAAGAGAAGCAAACAAAATTCTCAAACACAATAGTTGATGCTGTTTCCTTGATTGATTTGTTCACACATGATCAAATTACAGAACATATTAATAGTCTCAGAAAGGAATCTATTACTTCTGAGGAGGAAGCAGGGACTGAAGCAAACACATGCCAATTATGTGAAAGGAAAAAGCTTTACTTTGCACCAGTACCAATTGTTTGTTCATGTTGTGGCATACGCATCAAGAGAATATATTTCTGTAGAAAAGAAGAATTGGATGTACAGGGTTGCATTTGCTCCATGTGTTACAAGACTTCTAAAGGTGGGAAAATCACATTCAATGGGACATCTATTTCTAAGAAAAATCTAGAAAAAAGGACCAACGATGAAGTACTTGAAGAACCGTGGGTGGAATGCAATAAATGCAAAAGATGGCAACATCAAATATGTGCACTCTACAACAACAGAAGAGATTTGGATTGCAGTGCTGAGTATATATGTCCTGTATGCCGCTCAAAAGAAATTGAAAATGGAAAGCATGCTCACTTACTGAAGGCTGCTAATTTTGGTGCTAAGGACTTGCCAAGAACCGTGCTAAGTGACCACTTAGAAAAAAGACTTCTTGAGTGTCTCATGCAAGAGAGAGCAAAGTGGGAAAATGTTGAAGGGAACGAGAATCTTGATAAGGTTATAGCTGCAAAAGGTCTTTCTATTAGAGAAGTGTTATCTGTCGACAAACAATTGAAAGTGAATAAGCAGTTTCTGGATATCATTCCAGAGGAGAATTACCCTGCTGAATTCTCTTATAGATCAAGAGTTATTCTTCTGTTTCAGCAGATTGAAGGAGCAGATATATGCATTTTTGGAATGTATGTCCAGGAGTTTGGCTCTGAATGCGGAAATCCGAATCAGCGTTGTGTATACATTTCATATCTTGATTCTGTCAAGTATTTTATGCCTGAAAGAAGGACAAAGAGTGGAGAAGCCCTTCGTACCTTCGTTTACCATGAGATATTGATTGGATACCTTGATTTTTGTAAAAAAAGGGGTTTCCTGACTTGCTACATATGGGCCTGTGCTCCTTCAAGAAAAGGGGATGATTATATACTATATTGCCACCCCAAAGAGCAAAAGACTCCGAAGAATGATAAGCTACGCCGGTGGTATCTATCAATGTTAAAAAAGGCTACTGAAGAAAATATTGTTGTTGGTTTAACCAACGTATATGATCATTTCTTTGTTGCTGCTGAGAAAGGGGACTCCAAGGTGACAGCTTCTCGTTTGCCATACTTTGATGGAGACTGCTGGTCTGGTAATGCTATGGAAGCAGCCAAGACCATTGAAAAAGAGTGTGGAGGAGACTATGAAAAGATGTTGAAGGAACAAGTGCCAAATAGAGCTTTAAAGACCATGGGACATGCCAATCCTTCCAAAGACACTGCCAAAGACATTTTAGTGATGCGAAAAGTTGGCCAAAATATATGGCCTACCAGGGAAAACTTCCTTATAGCTCACTTGCAATATGCATGCATACATTGCCGTGAAGTGATAGTGTCTGGGAAGCGATGGTTTTGCACTGAATGCAAGGAAATTCAGGAGTGCGAAAGATGCCATAGTTCTGATGCGCACCCTTCAAAGAATGGCGAGTTGCATACACTTTGTCAGGCCGTTGTTGATGATATCCCCTCCAACACTAAACATAATGATATTGTCCTTGAGAGTAGATTATTTGAAAATAGGGATAACTTTTTAAGTTTCTGCCAGAAGTCTCAGTTTCAGTTTGACACACTCCGTCGTGCCAAGTATTCCTCGATGATGGTCCTCTACCATCTACACAATCCTACTCTGATGACTGTTGTAAAATGTTGTAGAATCTGTAGTGCACACAATGTATTCCAAAAGAGCTGGAAATGTGAGATTTGTCCAGAGTGTACCATTTGCTCTGCATGCTATAAGGATAGAGGTGCTGACTGCCATGAACACAAGTTGACTCAAAATGAACACAAGCTCACTCAAAATGAACTCAAGTTGACTCAAAATTATTCAAGACCGATATATCAATCTGGGAATCAGGAGTCAAATGAGAAAATGATGGTGAAACTGCTGAACGTTTTAAAGCATGCATCTCAATGCCGTGCAGCTAATGCTGAACCTTGCTCTCACCCAAACTGTTCTCAAATCAAGAAGCTGTTCTCTCATGCCAGTAGGTGCGAAATTCGAGTGAATCGGGGCTGCCAGCAGTGTAAAAAGATATGGTTTATACTTGCTGCTCACTCTAGGAATTGCAAAGACTTGGAGTGTAGCATTCCACGGTGCAGGGATCTAAAGAAGCATGTAGAATCGAAAGCAATGCAGTTTTTGAAAGTGACAAAGCAGCCGTTGATCAATGAATCTTTGTGA
Protein sequence

>Msa0500990

MFAKGFHLGGSTWRDIPRNSSSVFSNIPPKRCFDELSNQVGFSSDWRYHPEMVYNRNWIRRKIFEIIQNEQLGPALEILLLTNAASKEEYMNLETLNQRVQALLGVPKSYNTGYYGVPEAGISHPSIAHNLPCFPGDGSSIPPVADMDVLCNLPVSYGGSNLDANIRSISNYFSHQHANNLEMDLTKYKDFFPTTMGRSLQSEDSSFMSSQSASVNTSEDTMQYQPQKLDFQKNSTVRHVVNDVPSDNTESILRPAKIQKMMDSGFGVSSTNHPSFDQWNNGMVQPYSFQPHPKVQHSEFPLSSLHYESNVEQITNPIFHSAGVKGINTNVMVDTFGQPGLESYDVMDSNNLNNIVTGIKSRMQCLDMDPIPTNGEDIQGRTKFDHGIRLNSSMPTLTKEPIPTAFWTNAKKKADELTFDQEKLTKSSVTTVSGKTNYVIYDLTSEPKLIPSKGLEAGRISYEPDSLIYGMIDCRNSVEVDRVPELITIDGDDDEEDIQGRIGFNHEGTDAKEKVSEPKVDQEKKDLESHVVTDSCKSMEIDIGSNSNMPALISKVAILIDVDDKQNKIGFNQEGTDAKEKASELTPDQEKQTKFSNTIVDAVSLIDLFTHDQITEHINSLRKESITSEEEAGTEANTCQLCERKKLYFAPVPIVCSCCGIRIKRIYFCRKEELDVQGCICSMCYKTSKGGKITFNGTSISKKNLEKRTNDEVLEEPWVECNKCKRWQHQICALYNNRRDLDCSAEYICPVCRSKEIENGKHAHLLKAANFGAKDLPRTVLSDHLEKRLLECLMQERAKWENVEGNENLDKVIAAKGLSIREVLSVDKQLKVNKQFLDIIPEENYPAEFSYRSRVILLFQQIEGADICIFGMYVQEFGSECGNPNQRCVYISYLDSVKYFMPERRTKSGEALRTFVYHEILIGYLDFCKKRGFLTCYIWACAPSRKGDDYILYCHPKEQKTPKNDKLRRWYLSMLKKATEENIVVGLTNVYDHFFVAAEKGDSKVTASRLPYFDGDCWSGNAMEAAKTIEKECGGDYEKMLKEQVPNRALKTMGHANPSKDTAKDILVMRKVGQNIWPTRENFLIAHLQYACIHCREVIVSGKRWFCTECKEIQECERCHSSDAHPSKNGELHTLCQAVVDDIPSNTKHNDIVLESRLFENRDNFLSFCQKSQFQFDTLRRAKYSSMMVLYHLHNPTLMTVVKCCRICSAHNVFQKSWKCEICPECTICSACYKDRGADCHEHKLTQNEHKLTQNELKLTQNYSRPIYQSGNQESNEKMMVKLLNVLKHASQCRAANAEPCSHPNCSQIKKLFSHASRCEIRVNRGCQQCKKIWFILAAHSRNCKDLECSIPRCRDLKKHVESKAMQFLKVTKQPLINESL*