AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0429830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0429830 MtrunA17_Chr3g0133551 97.602 1001 23 1 1 1000 1 1001 0.0 2031
Msa0429830 MtrunA17_Chr5g0393551 24.740 384 243 15 621 983 825 1183 1.01e-12 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0429830 AT1G80260.1 57.708 986 370 12 29 994 29 987 0.0 1074
Msa0429830 AT1G20570.3 55.692 975 390 15 30 987 35 984 0.0 1001
Msa0429830 AT1G20570.2 55.487 975 390 16 30 987 35 982 0.0 991
Msa0429830 AT1G20570.1 54.872 975 389 17 30 987 35 975 0.0 974
Msa0429830 AT1G80260.3 53.737 843 343 12 29 851 29 844 0.0 830
Msa0429830 AT1G80260.2 52.671 805 334 12 29 813 29 806 0.0 766
Msa0429830 AT1G20570.4 48.052 693 318 14 30 707 35 700 0.0 572
Msa0429830 AT3G43610.1 24.834 302 190 9 623 908 841 1121 1.19e-13 76.3
Msa0429830 AT3G43610.3 24.834 302 190 9 623 908 804 1084 1.34e-13 75.9
Msa0429830 AT3G43610.2 24.752 303 190 10 623 908 841 1122 1.05e-12 73.2

Find 213 sgRNAs with CRISPR-Local

Find 638 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATTAATGTCTTCATATTT+TGG 0.108022 3_2:-81334683 None:intergenic
TCTTTGTCTAGTACAATTAA+AGG 0.202650 3_2:+81334209 Msa0429830:CDS
AAAATAGTTGTAGTTAATTC+TGG 0.245536 3_2:-81341294 None:intergenic
ATCCTGTGAGTGAATGAATT+TGG 0.247200 3_2:-81334969 None:intergenic
CCAAAATATGAAGACATTAA+TGG 0.249934 3_2:+81334683 Msa0429830:CDS
GGTTTAAGAAAGGCTATATT+TGG 0.254968 3_2:+81334878 Msa0429830:CDS
TTTCCCTCATTTGGCTGATT+TGG 0.256083 3_2:+81341268 Msa0429830:CDS
TAGCACGTCTGGTTCTGTTT+TGG 0.261887 3_2:+81338048 Msa0429830:CDS
GTATCACTAGCTGGACTTAT+TGG 0.265996 3_2:+81334461 Msa0429830:CDS
CAGTTACTGAGGCTGAGTTC+TGG 0.268258 3_2:+81334057 Msa0429830:CDS
CAGTGAATTACCAGTTTATC+AGG 0.287087 3_2:-81340567 None:intergenic
ATATTGAGGGTCTTGATTCT+TGG 0.289056 3_2:+81333479 Msa0429830:CDS
CAGACCATAGTTTAAAGATT+TGG 0.290102 3_2:-81334390 None:intergenic
AGCTTGTCCTTTGTTTATAA+AGG 0.298700 3_2:+81334259 Msa0429830:CDS
GGGTAAAATTGTTTGATCTA+AGG 0.302477 3_2:+81341392 Msa0429830:exon
TTCTGCTTCTTCGTGGCTTA+AGG 0.310879 3_2:+81332549 Msa0429830:CDS
TTGCAGGCCACTTCTGTTGC+AGG 0.311913 3_2:+81341567 Msa0429830:three_prime_UTR
AGAGGAAGTAATGTTAAGTT+TGG 0.314974 3_2:+81334362 Msa0429830:CDS
ACAGAAGTGGCCTGCAATTA+CGG 0.318516 3_2:-81341561 None:intergenic
GTTAAGTGCTCCAGATTCTT+TGG 0.323705 3_2:+81337982 Msa0429830:CDS
CACCTTACTCAGAGAAGATT+TGG 0.325152 3_2:+81334609 Msa0429830:CDS
TGAATTAAACACAATATTAC+AGG 0.330031 3_2:+81336320 Msa0429830:CDS
ATTGCATTGCTTTCTTACTT+AGG 0.332429 3_2:+81340846 Msa0429830:CDS
TGTAGGGCATTTCCCTCATT+TGG 0.334632 3_2:+81341259 Msa0429830:CDS
GAATCAAGACCCTCAATATA+TGG 0.343580 3_2:-81333475 None:intergenic
TCAAGATTGGGGAAAGCCTC+TGG 0.345846 3_2:+81341371 Msa0429830:CDS
TGTTTAAGGGTTCACTAAAT+TGG 0.347571 3_2:-81341857 None:intergenic
GAAGGAACAAACTATACTTT+TGG 0.361584 3_2:+81334929 Msa0429830:CDS
TTTCCTCTTCCTTATTCTCA+TGG 0.362612 3_2:+81332338 Msa0429830:CDS
AATCTTGAAGCAACACTTCC+CGG 0.362939 3_2:-81341356 None:intergenic
GGAAGTGTTGCTTCAAGATT+GGG 0.363487 3_2:+81341359 Msa0429830:CDS
CTACATGCTGCTAAGGAACT+TGG 0.364026 3_2:-81334338 None:intergenic
GCTAAGTCAATTATTTCTGC+TGG 0.366977 3_2:+81334287 Msa0429830:CDS
AGTACCAAATCTTTAAACTA+TGG 0.368250 3_2:+81334386 Msa0429830:CDS
ATTGAAACTACCAAAGAATC+TGG 0.368302 3_2:-81337992 None:intergenic
GCAATATACTTGTTAGGTTC+AGG 0.369764 3_2:+81335442 Msa0429830:CDS
CATCAAACTGTTTCTCAATT+CGG 0.371950 3_2:-81340823 None:intergenic
TCCTTCTTCTCATTTGATGC+TGG 0.373994 3_2:-81334164 None:intergenic
AAGGAAGAGTGCTGTTTCTC+TGG 0.378596 3_2:-81335164 None:intergenic
TATGCTAAAATTCACATATA+AGG 0.379494 3_2:+81338117 Msa0429830:CDS
CTGCGAGCAATATACTTGTT+AGG 0.380884 3_2:+81335436 Msa0429830:CDS
ATAGAACAGGTAGATTATAT+TGG 0.382368 3_2:+81335355 Msa0429830:intron
TACCTGAACTGCAGGCAAAA+TGG 0.384045 3_2:-81335029 None:intergenic
CTTTGTGGTTCCTGATAAAC+TGG 0.387709 3_2:+81340557 Msa0429830:CDS
GGGAAGTGTTGCTTCAAGAT+TGG 0.394963 3_2:+81341358 Msa0429830:CDS
AATGACCTCATCCAGAGATT+TGG 0.397636 3_2:-81340493 None:intergenic
ATCTGTACCTGCAGCAGACT+TGG 0.399383 3_2:+81333246 Msa0429830:CDS
TTGCATTGCTTTCTTACTTA+GGG 0.400349 3_2:+81340847 Msa0429830:CDS
CAGAAGTGGCCTGCAATTAC+GGG 0.401665 3_2:-81341560 None:intergenic
TTATCTTTCAAACTAAATGT+AGG 0.403353 3_2:+81341242 Msa0429830:CDS
ATCAAATGAGAAGAAGGAAA+TGG 0.406917 3_2:+81334169 Msa0429830:CDS
GTTGAGGAATGTTGCGTTGA+AGG 0.407731 3_2:+81332672 Msa0429830:CDS
TTTCGACAAACGGTAATAAC+GGG 0.415411 3_2:-81334776 None:intergenic
GTTGTGATTCCATGAGAATA+AGG 0.419331 3_2:-81332347 None:intergenic
AGTTACTGAGGCTGAGTTCT+GGG 0.419762 3_2:+81334058 Msa0429830:CDS
CCAAACTCAAAATATACATC+AGG 0.420178 3_2:-81333220 None:intergenic
CTTCTCATTTGATGCTGGCA+TGG 0.420448 3_2:-81334159 None:intergenic
CTCCTTCTCATAGAGTGGTT+GGG 0.422938 3_2:+81334414 Msa0429830:CDS
TCTCCTTCTCATAGAGTGGT+TGG 0.427105 3_2:+81334413 Msa0429830:CDS
GCCTATGTGCCCGTAATTGC+AGG 0.428667 3_2:+81341551 Msa0429830:three_prime_UTR
AACTGCCTACATTCAGAAAC+AGG 0.429486 3_2:+81335263 Msa0429830:CDS
TATGACAGTGGCCAAATCTC+TGG 0.432406 3_2:+81340482 Msa0429830:CDS
CTCCGTTATTGATACGAAAA+CGG 0.435968 3_2:-81332375 None:intergenic
GGCTTTCACAATCGTTTACA+AGG 0.436014 3_2:-81341684 None:intergenic
AGAAGGAAGAGGAGTTGCGA+AGG 0.436418 3_2:-81332260 None:intergenic
AAAATATTGTTGAGAGTGAT+GGG 0.443508 3_2:+81338020 Msa0429830:CDS
CCTCATGAACTATTCGCAAT+AGG 0.443607 3_2:-81333192 None:intergenic
TGTTGACTTAGTCTTTGCTC+TGG 0.443814 3_2:+81333160 Msa0429830:intron
TAAAAGTCGTGTCAATAACT+TGG 0.444724 3_2:+81338078 Msa0429830:CDS
TTCCTTCAGAAGTTCTTCAC+TGG 0.445367 3_2:+81335181 Msa0429830:CDS
AACGAACTTGAACTCGTTCG+AGG 0.445931 3_2:+81332292 Msa0429830:CDS
AGCCGCGTTAATATCATCCT+TGG 0.446699 3_2:+81340710 Msa0429830:CDS
CGGAGCTGTTTCTGCAATCA+AGG 0.447886 3_2:+81340778 Msa0429830:CDS
AATACTTCTGCCAAGATGAT+TGG 0.449525 3_2:+81334504 Msa0429830:CDS
ATTAATTACAGGAATCAATC+AGG 0.450032 3_2:+81337939 Msa0429830:intron
GATGGGGAAGCTAGCACGTC+TGG 0.454223 3_2:+81338037 Msa0429830:CDS
CAGATTCATGCCAATCATCT+TGG 0.456196 3_2:-81334514 None:intergenic
AACGCATTCAAAGTAGGATT+AGG 0.457958 3_2:-81332520 None:intergenic
TTGTTGCTTCTGCTTCTTCG+TGG 0.458339 3_2:+81332542 Msa0429830:CDS
TTCACCAATATGTGATGGAC+CGG 0.459217 3_2:+81338757 Msa0429830:CDS
AAATGACGAGGGTTTAAGAA+AGG 0.459804 3_2:+81334868 Msa0429830:CDS
GGGAATTTAATGACCACATC+TGG 0.462590 3_2:+81341332 Msa0429830:CDS
TACCAAATCTTCTCTGAGTA+AGG 0.465054 3_2:-81334611 None:intergenic
AATTCAGCGGCAGTGCTTTG+TGG 0.465133 3_2:+81340542 Msa0429830:CDS
AAAAGTCGTGTCAATAACTT+GGG 0.470045 3_2:+81338079 Msa0429830:CDS
ATAAAGTGCGGAGATGGATG+TGG 0.470423 3_2:+81338502 Msa0429830:CDS
TTGAGATGAAGGAGTTTCAG+AGG 0.471684 3_2:-81341831 None:intergenic
AAGCTTGTTGCCATATATTG+AGG 0.472101 3_2:+81333465 Msa0429830:CDS
TACATGCTGCTAAGGAACTT+GGG 0.475663 3_2:-81334337 None:intergenic
ATGAAGGAGTTTCAGAGGAT+AGG 0.478509 3_2:-81341826 None:intergenic
GCAGGCAAAATGGTGGGAAA+AGG 0.481625 3_2:-81335019 None:intergenic
TTAAGAAAGGCTATATTTGG+TGG 0.484839 3_2:+81334881 Msa0429830:CDS
CAAATAACAGAAAACATCAT+TGG 0.485901 3_2:+81338697 Msa0429830:CDS
CTTGCCTTCTTTAAATGACG+AGG 0.487749 3_2:+81334856 Msa0429830:CDS
TTTGGAACTGGCAGGTACCT+TGG 0.489890 3_2:+81338236 Msa0429830:intron
ATTCACCTGTTTCTGAATGT+AGG 0.490395 3_2:-81335268 None:intergenic
TCAAATGAGAAGAAGGAAAT+GGG 0.491559 3_2:+81334170 Msa0429830:CDS
TATTAGATAAAGTGCGGAGA+TGG 0.494973 3_2:+81338496 Msa0429830:CDS
GAGGTAGTGGAGTCGTTCTT+AGG 0.495595 3_2:-81335218 None:intergenic
AAACCCTCGTCATTTAAAGA+AGG 0.496105 3_2:-81334860 None:intergenic
TTTAATGACCACATCTGGCC+CGG 0.497421 3_2:+81341337 Msa0429830:CDS
AAGGGGAATTCGTTGGAGAA+TGG 0.502014 3_2:-81332241 None:intergenic
GAAGGAAGAGGAGTTGCGAA+GGG 0.503176 3_2:-81332259 None:intergenic
TAAATTGGTAGTTGAGATGA+AGG 0.506367 3_2:-81341842 None:intergenic
TCCTCTGCTACATGCTGCTA+AGG 0.506439 3_2:-81334345 None:intergenic
TTGTGGTGATGCAGCGGTTG+AGG 0.507310 3_2:+81332656 Msa0429830:intron
TGCATAATAACCAGAGGTAG+TGG 0.507745 3_2:-81335231 None:intergenic
GCCAGCATCAAATGAGAAGA+AGG 0.508393 3_2:+81334163 Msa0429830:CDS
TATCTTTCAAACTAAATGTA+GGG 0.510323 3_2:+81341243 Msa0429830:CDS
CATGGTACTTTACATGTATG+TGG 0.511026 3_2:+81333441 Msa0429830:CDS
GTCAATAACTTGGGGATGAA+CGG 0.512497 3_2:+81338088 Msa0429830:CDS
GAAATCAGAATAGTGAAGAA+AGG 0.514060 3_2:-81332151 None:intergenic
TTTATAAACAAAGGACAAGC+TGG 0.514362 3_2:-81334257 None:intergenic
TGTGGATTAAGGTTTGGGGA+TGG 0.515687 3_2:-81332207 None:intergenic
TGTTAAAGTTGATGAATGAA+TGG 0.519572 3_2:+81335389 Msa0429830:CDS
ATACCCGGTCCATCACATAT+TGG 0.522988 3_2:-81338761 None:intergenic
CAGAAAACATCATTGGTTAG+TGG 0.526266 3_2:+81338704 Msa0429830:CDS
GATGAATGAATGGAGGTTGA+TGG 0.526491 3_2:+81335399 Msa0429830:CDS
AAGGATGATATTAACGCGGC+TGG 0.528179 3_2:-81340708 None:intergenic
AGCTTGTTGCCATATATTGA+GGG 0.528688 3_2:+81333466 Msa0429830:CDS
GAAGAAGGAAATGGGCATGA+GGG 0.531640 3_2:+81334178 Msa0429830:CDS
AAAGGCAAGAACTCTGATAC+AGG 0.532612 3_2:-81335141 None:intergenic
CTGGACAGTCTCTAACGCTC+TGG 0.532621 3_2:-81334238 None:intergenic
TGACAACATGTAAGCCTCAT+GGG 0.533383 3_2:-81340520 None:intergenic
GCTAAATCCTTTATAAACAA+AGG 0.533484 3_2:-81334266 None:intergenic
TATGAAGACATTAATGGCAA+TGG 0.534606 3_2:+81334689 Msa0429830:CDS
CTTCGTCTTTGAGCTCAATG+AGG 0.538388 3_2:+81341501 Msa0429830:three_prime_UTR
GAGGAATGTTGCGTTGAAGG+AGG 0.539110 3_2:+81332675 Msa0429830:CDS
CTGCTAAGGAACTTGGGGCA+TGG 0.539790 3_2:-81334331 None:intergenic
AGTGAATAAGACATTCTCTC+AGG 0.540575 3_2:-81341480 None:intergenic
AGTTGGATAAGGGTGAAACA+TGG 0.540744 3_2:+81336286 Msa0429830:CDS
AGTTGCGAAGGGGAATTCGT+TGG 0.541353 3_2:-81332248 None:intergenic
ATAAATTGTGGACGACAACT+CGG 0.545434 3_2:-81334126 None:intergenic
GCAACAAACGCATTCAAAGT+AGG 0.550007 3_2:-81332526 None:intergenic
GTGACCAAATCAGCCAAATG+AGG 0.550506 3_2:-81341272 None:intergenic
GAAAAGCATCCACAAAATGA+AGG 0.551030 3_2:-81338737 None:intergenic
ATTCCATGAGAATAAGGAAG+AGG 0.551317 3_2:-81332341 None:intergenic
GTGTTTGCAATGAGTTCAAG+AGG 0.553383 3_2:-81338259 None:intergenic
TTCGTCTTTGAGCTCAATGA+GGG 0.557520 3_2:+81341502 Msa0429830:three_prime_UTR
ATCCAAATTCATTCACTCAC+AGG 0.558285 3_2:+81334967 Msa0429830:CDS
TTGACAACATGTAAGCCTCA+TGG 0.559907 3_2:-81340521 None:intergenic
AATCATCCTTTGCAGGGTAG+GGG 0.560554 3_2:+81338666 Msa0429830:intron
GTTGGATAAGGGTGAAACAT+GGG 0.561179 3_2:+81336287 Msa0429830:CDS
CAAGATTGGGGAAAGCCTCT+GGG 0.561372 3_2:+81341372 Msa0429830:CDS
AGTAGAAATACCTGAACTGC+AGG 0.561999 3_2:-81335037 None:intergenic
TGTTAAGAAAGTTGAAACTA+CGG 0.562879 3_2:+81332489 Msa0429830:CDS
TAAATTTAAATAAGATACAA+AGG 0.564848 3_2:-81334549 None:intergenic
AAGAACGACTCCACTACCTC+TGG 0.566170 3_2:+81335221 Msa0429830:CDS
CTCGTGTATATTAGGTGATG+CGG 0.569304 3_2:+81338442 Msa0429830:intron
GGCAATTAAGAAGTACAACC+AGG 0.569527 3_2:+81338285 Msa0429830:CDS
TTCAAAGTAGGATTAGGTCT+CGG 0.569909 3_2:-81332514 None:intergenic
AGAAGAAGGAAATGGGCATG+AGG 0.573659 3_2:+81334177 Msa0429830:CDS
TGAACAGCCAAGTCTGCTGC+AGG 0.575021 3_2:-81333253 None:intergenic
AGAGTGCTGTTTCTCTGGAA+AGG 0.575452 3_2:-81335159 None:intergenic
TCCTTAGCAGCATGTAGCAG+AGG 0.576081 3_2:+81334344 Msa0429830:CDS
GCAATGAGTTCAAGAGGCCA+AGG 0.576107 3_2:-81338253 None:intergenic
CTAGCTGGACTTATTGGTCA+TGG 0.577169 3_2:+81334467 Msa0429830:CDS
ATCTTATTTAAATTTAAATG+CGG 0.577484 3_2:+81334556 Msa0429830:CDS
CGTGCATCCTGCAACAGAAG+TGG 0.578317 3_2:-81341574 None:intergenic
ATCTTGAAGCAACACTTCCC+GGG 0.581560 3_2:-81341355 None:intergenic
CTGAACTGCAGGCAAAATGG+TGG 0.583006 3_2:-81335026 None:intergenic
GGAATCACCGACATAAATTG+TGG 0.583520 3_2:-81334138 None:intergenic
AACACTTCCCGGGCCAGATG+TGG 0.583916 3_2:-81341345 None:intergenic
AGTGGCCAAATCTCTGGATG+AGG 0.588149 3_2:+81340488 Msa0429830:CDS
ATCCAGTGAAGAACTTCTGA+AGG 0.591637 3_2:-81335183 None:intergenic
CTCAAAATATACATCAGGGA+TGG 0.591850 3_2:-81333215 None:intergenic
GATCATCTTACCTCATCAGA+AGG 0.594156 3_2:-81333526 None:intergenic
TTGCCTTCTTTAAATGACGA+GGG 0.597136 3_2:+81334857 Msa0429830:CDS
GGCAGAAGTATTTACAAACA+TGG 0.599148 3_2:-81334493 None:intergenic
TCTGTCTCCTTCTCATAGAG+TGG 0.599169 3_2:+81334409 Msa0429830:CDS
AAGGAAGAGGAGTTGCGAAG+GGG 0.599332 3_2:-81332258 None:intergenic
ATGGCAATGGTGATTCAAGA+GGG 0.600314 3_2:+81334702 Msa0429830:CDS
ATCCAACTTATCGAAAATGA+CGG 0.605211 3_2:-81336271 None:intergenic
AGCCCAACCACTCTATGAGA+AGG 0.608483 3_2:-81334416 None:intergenic
CAAATCTTCTCTGAGTAAGG+TGG 0.610555 3_2:-81334608 None:intergenic
TGCAGGTATACCACAGTGCA+TGG 0.611318 3_2:+81340442 Msa0429830:intron
TGACCAAATCAGCCAAATGA+GGG 0.611484 3_2:-81341271 None:intergenic
AATCAAGGCAAGGTGTGAGA+TGG 0.611771 3_2:+81340793 Msa0429830:CDS
TTAATGACCACATCTGGCCC+GGG 0.612240 3_2:+81341338 Msa0429830:CDS
AATTGTACTAGACAAAGAGA+TGG 0.613500 3_2:-81334204 None:intergenic
GCCTGCAATTACGGGCACAT+AGG 0.613990 3_2:-81341552 None:intergenic
ACATGCTGCTAAGGAACTTG+GGG 0.616224 3_2:-81334336 None:intergenic
AATGGCAATGGTGATTCAAG+AGG 0.620186 3_2:+81334701 Msa0429830:CDS
TCACCAATATGTGATGGACC+GGG 0.621593 3_2:+81338758 Msa0429830:CDS
CTGTTTCTGCAATCAAGGCA+AGG 0.622785 3_2:+81340783 Msa0429830:CDS
TGAACTGCAGGCAAAATGGT+GGG 0.624708 3_2:-81335025 None:intergenic
TAAAGTTGATGAATGAATGG+AGG 0.625985 3_2:+81335392 Msa0429830:CDS
ACTTGATGATCCTTCTGATG+AGG 0.627081 3_2:+81333516 Msa0429830:CDS
ACAGGAGGAAGCTTATCTCA+TGG 0.628318 3_2:+81333423 Msa0429830:intron
TTGTCGTCCACAATTTATGT+CGG 0.632408 3_2:+81334131 Msa0429830:CDS
CAAACTCAAAATATACATCA+GGG 0.637105 3_2:-81333219 None:intergenic
CTTCTCTGAGTAAGGTGGAG+CGG 0.637116 3_2:-81334603 None:intergenic
GAAGAAATGTGTCTTGTACA+AGG 0.642055 3_2:+81333304 Msa0429830:CDS
TAAAGAAGTCTCAGTTACTG+AGG 0.643493 3_2:+81334046 Msa0429830:CDS
CCTATTGCGAATAGTTCATG+AGG 0.646235 3_2:+81333192 Msa0429830:CDS
GTGTCTTGTACAAGGTGGCG+AGG 0.649705 3_2:+81333312 Msa0429830:CDS
CTTACATGTTGTCAATTCAG+CGG 0.660863 3_2:+81340529 Msa0429830:CDS
AATTTGTATTAGATAAAGTG+CGG 0.667497 3_2:+81338490 Msa0429830:CDS
GAAGTGTTGCTTCAAGATTG+GGG 0.671751 3_2:+81341360 Msa0429830:CDS
CTCAACGATTTGAAGACACG+TGG 0.672206 3_2:-81332461 None:intergenic
GTGTCTATGAATAATGCAGA+TGG 0.673767 3_2:+81332700 Msa0429830:CDS
AGAAGTCTAAAGCTAAACCA+AGG 0.673970 3_2:-81340727 None:intergenic
TGAGGTCATTGATGCCCATG+AGG 0.679084 3_2:+81340506 Msa0429830:CDS
AAATATTGTTGAGAGTGATG+GGG 0.690253 3_2:+81338021 Msa0429830:CDS
TGGCAATGGTGATTCAAGAG+GGG 0.700226 3_2:+81334703 Msa0429830:CDS
AAAGTCGTGTCAATAACTTG+GGG 0.709042 3_2:+81338080 Msa0429830:CDS
CAGTACTGCATAATAACCAG+AGG 0.710633 3_2:-81335237 None:intergenic
AACCAAGGATGATATTAACG+CGG 0.726058 3_2:-81340712 None:intergenic
AGTGCGGAGATGGATGTGGA+AGG 0.735084 3_2:+81338506 Msa0429830:CDS
TGAACTCATTGCAAACACAG+AGG 0.740791 3_2:+81338264 Msa0429830:CDS
ACTATGTGAAAGTATGACAG+TGG 0.781798 3_2:+81340470 Msa0429830:CDS
GAAATGTGTCTTGTACAAGG+TGG 0.783507 3_2:+81333307 Msa0429830:CDS
ATAGTTCACGCCATGCACTG+TGG 0.784087 3_2:-81340452 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTCAATAATCAATAA+AGG - chr3_2:81332607-81332626 None:intergenic 10.0%
!!! CATTTTTTATACATTTTTAT+TGG + chr3_2:81333365-81333384 Msa0429830:intron 10.0%
!! TAAATTTAAATAAGATACAA+AGG - chr3_2:81334552-81334571 None:intergenic 10.0%
!!! ATCTTATTTAAATTTAAATG+CGG + chr3_2:81334556-81334575 Msa0429830:CDS 10.0%
!!! ATTTTTTAATAACATTATGT+TGG + chr3_2:81336055-81336074 Msa0429830:intron 10.0%
!!! TTTTTTAATAACATTATGTT+GGG + chr3_2:81336056-81336075 Msa0429830:intron 10.0%
!!! TTTTGTTTTTTAAAATTCAA+AGG - chr3_2:81339854-81339873 None:intergenic 10.0%
!!! TTTGAATTTTAAAAAACAAA+AGG + chr3_2:81339853-81339872 Msa0429830:intron 10.0%
!! TTGAGAAAAAATTGAATTTA+AGG + chr3_2:81332989-81333008 Msa0429830:intron 15.0%
!! TCGTTGAAATAAATTAAATT+TGG - chr3_2:81333114-81333133 None:intergenic 15.0%
!!! ACAAATATTTAATTTGAAAC+AGG + chr3_2:81335110-81335129 Msa0429830:intron 15.0%
!! ATATCATAATACATTACAAA+GGG - chr3_2:81335651-81335670 None:intergenic 15.0%
!! TATATCATAATACATTACAA+AGG - chr3_2:81335652-81335671 None:intergenic 15.0%
!!! TCAAAATATTTTGTAAGTTT+AGG + chr3_2:81336161-81336180 Msa0429830:intron 15.0%
!! GTCTAATATTAGAATAAATA+AGG + chr3_2:81336621-81336640 Msa0429830:intron 15.0%
!! AAAATAAAAACAACTTAAGT+GGG - chr3_2:81337246-81337265 None:intergenic 15.0%
!! AAAAAATATCTCTATAATCA+AGG + chr3_2:81337552-81337571 Msa0429830:intron 15.0%
!! AAAAATATCTCTATAATCAA+GGG + chr3_2:81337553-81337572 Msa0429830:intron 15.0%
!! AATTAGCAATATTATAATGA+TGG + chr3_2:81337820-81337839 Msa0429830:intron 15.0%
!!! GATTTTATTTCATAAATGTA+GGG + chr3_2:81337859-81337878 Msa0429830:intron 15.0%
!!! TTAAACTTTAATTTGACATT+TGG + chr3_2:81339889-81339908 Msa0429830:intron 15.0%
!! AAAAAAAAATGAGTTGTTAA+AGG + chr3_2:81340064-81340083 Msa0429830:intron 15.0%
!! GATTCAAAAATTCTTTATCA+AGG + chr3_2:81332746-81332765 Msa0429830:CDS 20.0%
!!! CATTTAAAATGCATTTTTTG+TGG + chr3_2:81332953-81332972 Msa0429830:intron 20.0%
!! ATTGAATTTAAGGAAATTAC+AGG + chr3_2:81332999-81333018 Msa0429830:intron 20.0%
!! CTTAGTTTAACAATATAACA+TGG - chr3_2:81333645-81333664 None:intergenic 20.0%
!!! AATAACTTCATGTTTTCATT+TGG + chr3_2:81333666-81333685 Msa0429830:intron 20.0%
!!! TATGACCTAAAAGTTATTTT+AGG - chr3_2:81333804-81333823 None:intergenic 20.0%
!! AATATGTTCTTAATCAGTAT+GGG - chr3_2:81333865-81333884 None:intergenic 20.0%
!!! ATACTGATTAAGAACATATT+GGG + chr3_2:81333865-81333884 Msa0429830:intron 20.0%
!!! AGATAAATTCAATGTTTTCA+AGG - chr3_2:81334825-81334844 None:intergenic 20.0%
!!! TTTTTAATGCAAGAAGATTT+TGG + chr3_2:81335894-81335913 Msa0429830:intron 20.0%
!!! AATATTTTGTAAGTTTAGGT+TGG + chr3_2:81336165-81336184 Msa0429830:intron 20.0%
!!! ATATTTTGTAAGTTTAGGTT+GGG + chr3_2:81336166-81336185 Msa0429830:intron 20.0%
!! TGAATTAAACACAATATTAC+AGG + chr3_2:81336320-81336339 Msa0429830:CDS 20.0%
!!! ATGGCAAAAAAAGTATTAAT+AGG - chr3_2:81336465-81336484 None:intergenic 20.0%
!! AGAGAAAAAAAACAAAAACT+CGG - chr3_2:81336690-81336709 None:intergenic 20.0%
!!! TTTACGTTATAGGATTTTAA+AGG - chr3_2:81336718-81336737 None:intergenic 20.0%
!! AACTAAAAAGTGAAACAAAA+CGG + chr3_2:81337065-81337084 Msa0429830:intron 20.0%
!! GAAAATAAAAACAACTTAAG+TGG - chr3_2:81337247-81337266 None:intergenic 20.0%
!!! CGATTTTATTTCATAAATGT+AGG + chr3_2:81337858-81337877 Msa0429830:intron 20.0%
!! TATCTATGCATATTAATTAC+AGG + chr3_2:81337928-81337947 Msa0429830:intron 20.0%
!! TATGCTAAAATTCACATATA+AGG + chr3_2:81338117-81338136 Msa0429830:CDS 20.0%
!!! CTCTTGTTTATTAAGAATAA+TGG + chr3_2:81338176-81338195 Msa0429830:intron 20.0%
!! TGCAAGGATTATTAAAAATT+TGG + chr3_2:81338218-81338237 Msa0429830:intron 20.0%
!!! GATTATTAAAAATTTGGAAC+TGG + chr3_2:81338224-81338243 Msa0429830:intron 20.0%
!! AATTTGTATTAGATAAAGTG+CGG + chr3_2:81338490-81338509 Msa0429830:CDS 20.0%
!!! TTTGTTTTGTTAATTTTTCC+TGG + chr3_2:81338952-81338971 Msa0429830:intron 20.0%
!!! AAATACAAAGTGCTTAAATT+CGG + chr3_2:81339106-81339125 Msa0429830:intron 20.0%
!! AAAAAAACTTAACTAAGTGA+GGG - chr3_2:81339597-81339616 None:intergenic 20.0%
!! AAAAAAAACTTAACTAAGTG+AGG - chr3_2:81339598-81339617 None:intergenic 20.0%
!! ATACAATTGTGTTATATTAC+AGG - chr3_2:81339696-81339715 None:intergenic 20.0%
!!! TAACACAATTGTATCTTTTT+TGG + chr3_2:81339702-81339721 Msa0429830:intron 20.0%
!! CCTTATGTCAAATTAATAAT+TGG - chr3_2:81339748-81339767 None:intergenic 20.0%
!!! CCAATTATTAATTTGACATA+AGG + chr3_2:81339745-81339764 Msa0429830:intron 20.0%
!!! ATTAGCACTTATCTATTTTT+TGG - chr3_2:81340115-81340134 None:intergenic 20.0%
!! ATACAACAAACATTAAAAAG+CGG + chr3_2:81340755-81340774 Msa0429830:CDS 20.0%
!!! TTAAGATTCTCTGAAATTAA+AGG + chr3_2:81340968-81340987 Msa0429830:intron 20.0%
!!! TAAGATTCTCTGAAATTAAA+GGG + chr3_2:81340969-81340988 Msa0429830:intron 20.0%
!!! CAGATAAAAGATATTTTCAA+TGG - chr3_2:81341089-81341108 None:intergenic 20.0%
!!! ATAATTAGATTTTACAGTTC+AGG + chr3_2:81341123-81341142 Msa0429830:intron 20.0%
!!! TAATTAGATTTTACAGTTCA+GGG + chr3_2:81341124-81341143 Msa0429830:intron 20.0%
!! TATATTTATATGTGAGTACT+TGG + chr3_2:81341188-81341207 Msa0429830:intron 20.0%
!! TTATCTTTCAAACTAAATGT+AGG + chr3_2:81341242-81341261 Msa0429830:CDS 20.0%
!! TATCTTTCAAACTAAATGTA+GGG + chr3_2:81341243-81341262 Msa0429830:CDS 20.0%
!! AAAATAGTTGTAGTTAATTC+TGG - chr3_2:81341297-81341316 None:intergenic 20.0%
!!! TTTTTAATGTACAACTATGT+AGG + chr3_2:81341638-81341657 Msa0429830:three_prime_UTR 20.0%
! TGTTAAGAAAGTTGAAACTA+CGG + chr3_2:81332489-81332508 Msa0429830:CDS 25.0%
!!! GATTGAATTGATTTGAATTG+TGG + chr3_2:81332639-81332658 Msa0429830:intron 25.0%
!! TTTTTGAATCCTAACAATGT+TGG - chr3_2:81332736-81332755 None:intergenic 25.0%
!!! TAATATTTTTGTTGTGTGTG+CGG + chr3_2:81332801-81332820 Msa0429830:intron 25.0%
!! TTTTCCAAATGACAAAACTT+AGG + chr3_2:81332902-81332921 Msa0429830:intron 25.0%
!! AAACTTATGTGCATTTTCTT+AGG - chr3_2:81333065-81333084 None:intergenic 25.0%
! CAAACTCAAAATATACATCA+GGG - chr3_2:81333222-81333241 None:intergenic 25.0%
!!! CTGATGTATATTTTGAGTTT+GGG + chr3_2:81333221-81333240 Msa0429830:CDS 25.0%
!!! TGATGTATATTTTGAGTTTG+GGG + chr3_2:81333222-81333241 Msa0429830:CDS 25.0%
! CAAGTTTGTAAAACCTTTAT+TGG + chr3_2:81333398-81333417 Msa0429830:intron 25.0%
!! CATAGCCTAAAATAACTTTT+AGG + chr3_2:81333796-81333815 Msa0429830:intron 25.0%
! CAATATGTTCTTAATCAGTA+TGG - chr3_2:81333866-81333885 None:intergenic 25.0%
!! CATACTGATTAAGAACATAT+TGG + chr3_2:81333864-81333883 Msa0429830:intron 25.0%
! TCTTTGTCTAGTACAATTAA+AGG + chr3_2:81334209-81334228 Msa0429830:CDS 25.0%
! GCTAAATCCTTTATAAACAA+AGG - chr3_2:81334269-81334288 None:intergenic 25.0%
! AGTACCAAATCTTTAAACTA+TGG + chr3_2:81334386-81334405 Msa0429830:CDS 25.0%
!! CCATTAATGTCTTCATATTT+TGG - chr3_2:81334686-81334705 None:intergenic 25.0%
! CCAAAATATGAAGACATTAA+TGG + chr3_2:81334683-81334702 Msa0429830:CDS 25.0%
! TATTATCATAGTGTAAATCC+TGG - chr3_2:81335316-81335335 None:intergenic 25.0%
! ATAGAACAGGTAGATTATAT+TGG + chr3_2:81335355-81335374 Msa0429830:intron 25.0%
!!! TGTTAAAGTTGATGAATGAA+TGG + chr3_2:81335389-81335408 Msa0429830:CDS 25.0%
!!! CTTTATTTTGTGTTCTATAC+AGG + chr3_2:81335480-81335499 Msa0429830:intron 25.0%
! CACTTAGCAAACAATATAAT+TGG + chr3_2:81335610-81335629 Msa0429830:intron 25.0%
!!! TGTAAGTTACGTTTTGTTTT+TGG + chr3_2:81335851-81335870 Msa0429830:intron 25.0%
!!! GTAAGTTACGTTTTGTTTTT+GGG + chr3_2:81335852-81335871 Msa0429830:intron 25.0%
! TTACTTTCTTGCAAATCAAA+TGG + chr3_2:81336117-81336136 Msa0429830:intron 25.0%
! TACTTTCTTGCAAATCAAAT+GGG + chr3_2:81336118-81336137 Msa0429830:intron 25.0%
!!! ATTTTCGATAAGTTGGATAA+GGG + chr3_2:81336276-81336295 Msa0429830:CDS 25.0%
! AAAACTTATATGGGCATATT+TGG - chr3_2:81336564-81336583 None:intergenic 25.0%
! CTAAGCACTAAAACTTATAT+GGG - chr3_2:81336573-81336592 None:intergenic 25.0%
! ACTAAGCACTAAAACTTATA+TGG - chr3_2:81336574-81336593 None:intergenic 25.0%
! AATGAACATGTTTACGTTAT+AGG - chr3_2:81336728-81336747 None:intergenic 25.0%
! ATTGTTTGGACACTAAATAT+AGG - chr3_2:81336993-81337012 None:intergenic 25.0%
!!! GTTTTGTTTCACTTTTTAGT+TGG - chr3_2:81337066-81337085 None:intergenic 25.0%
! ACTAAAAAGTGAAACAAAAC+GGG + chr3_2:81337066-81337085 Msa0429830:intron 25.0%
!!! CTTGTTCTGTTTTATTTGTT+TGG - chr3_2:81337141-81337160 None:intergenic 25.0%
!! ATTTGATCTTCTCTTTGAAA+GGG + chr3_2:81337443-81337462 Msa0429830:intron 25.0%
! GTCAATATCAATAGTATTCA+AGG + chr3_2:81337639-81337658 Msa0429830:intron 25.0%
! TTCAACAGAGATATTAATTG+TGG + chr3_2:81337705-81337724 Msa0429830:intron 25.0%
! AATAAATGATTGTGATCATG+TGG + chr3_2:81337765-81337784 Msa0429830:intron 25.0%
!!! AAAATAGCTTTAGAACACAA+AGG - chr3_2:81337896-81337915 None:intergenic 25.0%
! ATTAATTACAGGAATCAATC+AGG + chr3_2:81337939-81337958 Msa0429830:intron 25.0%
!! ATCACTCTCAACAATATTTT+TGG - chr3_2:81338020-81338039 None:intergenic 25.0%
! AAAAATATTGTTGAGAGTGA+TGG + chr3_2:81338019-81338038 Msa0429830:CDS 25.0%
! AAAATATTGTTGAGAGTGAT+GGG + chr3_2:81338020-81338039 Msa0429830:CDS 25.0%
! TAAACAAGAGTTAGATAGAA+AGG - chr3_2:81338166-81338185 None:intergenic 25.0%
! TATGTAATCTCGTGTATATT+AGG + chr3_2:81338434-81338453 Msa0429830:intron 25.0%
! CAAATAACAGAAAACATCAT+TGG + chr3_2:81338697-81338716 Msa0429830:CDS 25.0%
!!! AGTTTTAAACTAACTAAGAC+TGG - chr3_2:81338809-81338828 None:intergenic 25.0%
!! AGTCTTAGTTAGTTTAAAAC+TGG + chr3_2:81338808-81338827 Msa0429830:intron 25.0%
! ACCAATTCATAAATACAAAC+CGG - chr3_2:81338841-81338860 None:intergenic 25.0%
! ACAAAACAAAGTTCTATTTC+TGG - chr3_2:81338942-81338961 None:intergenic 25.0%
!! GAACATATTGAAACTTTTGA+TGG + chr3_2:81339016-81339035 Msa0429830:intron 25.0%
!! TGTATTTAATTTACCGTATC+AGG - chr3_2:81339093-81339112 None:intergenic 25.0%
!! AAGTCAATTTTCTCTTTTGA+TGG + chr3_2:81339135-81339154 Msa0429830:intron 25.0%
!!! TCTAAGAAGCCTTTTATTTT+GGG + chr3_2:81339211-81339230 Msa0429830:intron 25.0%
! ATGAACAAGTGTTTATAAGT+GGG - chr3_2:81339449-81339468 None:intergenic 25.0%
!! TTTTGTAAATACTACATGTG+TGG + chr3_2:81339618-81339637 Msa0429830:intron 25.0%
! TTTGTAAATACTACATGTGT+GGG + chr3_2:81339619-81339638 Msa0429830:intron 25.0%
!! TTAATTTGACATAAGGCAAT+TGG + chr3_2:81339752-81339771 Msa0429830:intron 25.0%
! TAATTTGACATAAGGCAATT+GGG + chr3_2:81339753-81339772 Msa0429830:intron 25.0%
! AAAAACAAAAGGTAGAGATT+TGG + chr3_2:81339864-81339883 Msa0429830:intron 25.0%
! CAAATTCTCTATACTTAGTT+TGG + chr3_2:81340015-81340034 Msa0429830:intron 25.0%
! AGATAAGTGCTAATTAACTA+TGG + chr3_2:81340121-81340140 Msa0429830:intron 25.0%
!!! ATGGAGTTGCTTTTATATAA+TGG + chr3_2:81340140-81340159 Msa0429830:intron 25.0%
!! ATTACTAAGTCTTTCCTTTT+TGG + chr3_2:81340265-81340284 Msa0429830:intron 25.0%
!! AAACTTCTTTGTTGTATTCA+GGG + chr3_2:81340674-81340693 Msa0429830:intron 25.0%
!!! GCTTTTTAATGTTTGTTGTA+TGG - chr3_2:81340756-81340775 None:intergenic 25.0%
! TATGATCTGGATGAAAATAA+TGG + chr3_2:81340936-81340955 Msa0429830:intron 25.0%
!! AATTAGATTTTACAGTTCAG+GGG + chr3_2:81341125-81341144 Msa0429830:intron 25.0%
!!! TATTTTTACATGTCTGCTAA+TGG + chr3_2:81341311-81341330 Msa0429830:CDS 25.0%
!! ATTTTTACATGTCTGCTAAT+GGG + chr3_2:81341312-81341331 Msa0429830:CDS 25.0%
! AGTGTTATCTATATGTGATT+GGG + chr3_2:81341744-81341763 Msa0429830:intron 25.0%
!!! ACACTCATTGTTTTGTTTAA+GGG - chr3_2:81341873-81341892 None:intergenic 25.0%
!!! TACACTCATTGTTTTGTTTA+AGG - chr3_2:81341874-81341893 None:intergenic 25.0%
GAAATCAGAATAGTGAAGAA+AGG - chr3_2:81332154-81332173 None:intergenic 30.0%
!! ATTTTGTGGATTAAGGTTTG+GGG - chr3_2:81332214-81332233 None:intergenic 30.0%
!! GATTTTGTGGATTAAGGTTT+GGG - chr3_2:81332215-81332234 None:intergenic 30.0%
!! AGATTTTGTGGATTAAGGTT+TGG - chr3_2:81332216-81332235 None:intergenic 30.0%
! AACCGTTTTCGTATCAATAA+CGG + chr3_2:81332373-81332392 Msa0429830:CDS 30.0%
! AAGCGAATGAAGACTTTTAA+GGG - chr3_2:81332419-81332438 None:intergenic 30.0%
!! AATATTTTTGTTGTGTGTGC+GGG + chr3_2:81332802-81332821 Msa0429830:intron 30.0%
!! AAGACCTAAGTTTTGTCATT+TGG - chr3_2:81332909-81332928 None:intergenic 30.0%
CCAAACTCAAAATATACATC+AGG - chr3_2:81333223-81333242 None:intergenic 30.0%
!!! CCTGATGTATATTTTGAGTT+TGG + chr3_2:81333220-81333239 Msa0429830:CDS 30.0%
! GTAAAACCTTTATTGGTAAC+AGG + chr3_2:81333405-81333424 Msa0429830:intron 30.0%
ATAATGATTACCTCATCAGA+AGG - chr3_2:81333551-81333570 None:intergenic 30.0%
TATTGAATCTCTTGATTGCT+AGG + chr3_2:81333568-81333587 Msa0429830:intron 30.0%
ATTGAATCTCTTGATTGCTA+GGG + chr3_2:81333569-81333588 Msa0429830:intron 30.0%
CATTCTTCTAGTGATTATGT+TGG + chr3_2:81333715-81333734 Msa0429830:intron 30.0%
!! ACTGCAATATCTTTTGTTTG+CGG + chr3_2:81333829-81333848 Msa0429830:intron 30.0%
! GTTGGCTAAAATGCATTTTT+GGG - chr3_2:81333907-81333926 None:intergenic 30.0%
!! TGTTGGCTAAAATGCATTTT+TGG - chr3_2:81333908-81333927 None:intergenic 30.0%
ATCAAATGAGAAGAAGGAAA+TGG + chr3_2:81334169-81334188 Msa0429830:CDS 30.0%
TCAAATGAGAAGAAGGAAAT+GGG + chr3_2:81334170-81334189 Msa0429830:CDS 30.0%
AATTGTACTAGACAAAGAGA+TGG - chr3_2:81334207-81334226 None:intergenic 30.0%
TTTATAAACAAAGGACAAGC+TGG - chr3_2:81334260-81334279 None:intergenic 30.0%
! AGCTTGTCCTTTGTTTATAA+AGG + chr3_2:81334259-81334278 Msa0429830:CDS 30.0%
AGAGGAAGTAATGTTAAGTT+TGG + chr3_2:81334362-81334381 Msa0429830:CDS 30.0%
CAGACCATAGTTTAAAGATT+TGG - chr3_2:81334393-81334412 None:intergenic 30.0%
!!! ATTTTTTCTGTATCACTAGC+TGG + chr3_2:81334452-81334471 Msa0429830:CDS 30.0%
TATGAAGACATTAATGGCAA+TGG + chr3_2:81334689-81334708 Msa0429830:CDS 30.0%
! TTTTCGACAAACGGTAATAA+CGG - chr3_2:81334780-81334799 None:intergenic 30.0%
AAAAACAATCGGAAACAACA+GGG + chr3_2:81334796-81334815 Msa0429830:CDS 30.0%
GGTTTAAGAAAGGCTATATT+TGG + chr3_2:81334878-81334897 Msa0429830:CDS 30.0%
TTAAGAAAGGCTATATTTGG+TGG + chr3_2:81334881-81334900 Msa0429830:CDS 30.0%
! ACATCATTTTCAGATAGTGA+AGG + chr3_2:81334911-81334930 Msa0429830:CDS 30.0%
! GAAGGAACAAACTATACTTT+TGG + chr3_2:81334929-81334948 Msa0429830:CDS 30.0%
TGTTTATCACACTAAAGTAC+TGG - chr3_2:81335093-81335112 None:intergenic 30.0%
ATAAACCATATGACAATTCC+AGG + chr3_2:81335295-81335314 Msa0429830:intron 30.0%
TAAATCCTGGAATTGTCATA+TGG - chr3_2:81335303-81335322 None:intergenic 30.0%
!! TGCTTTATTTCGAATAGAAC+AGG + chr3_2:81335342-81335361 Msa0429830:intron 30.0%
!! TAAAGTTGATGAATGAATGG+AGG + chr3_2:81335392-81335411 Msa0429830:CDS 30.0%
! CTTTTGCCCTATATATTGTT+TGG + chr3_2:81335566-81335585 Msa0429830:intron 30.0%
TGTCCACCAAACAATATATA+GGG - chr3_2:81335575-81335594 None:intergenic 30.0%
ATGTCCACCAAACAATATAT+AGG - chr3_2:81335576-81335595 None:intergenic 30.0%
GATTACGCAGGAAATAAAAT+AGG + chr3_2:81335822-81335841 Msa0429830:intron 30.0%
TAAGAACCAAATAACAATCG+AGG - chr3_2:81335934-81335953 None:intergenic 30.0%
TCATGTCATATTCGTATCTT+TGG + chr3_2:81336085-81336104 Msa0429830:intron 30.0%
! ATTGATATTTTGTCTTGTGC+AGG + chr3_2:81336225-81336244 Msa0429830:intron 30.0%
ATCCAACTTATCGAAAATGA+CGG - chr3_2:81336274-81336293 None:intergenic 30.0%
!! CATTTTCGATAAGTTGGATA+AGG + chr3_2:81336275-81336294 Msa0429830:CDS 30.0%
! GTGTACTTTAGTGTACTTTT+TGG + chr3_2:81336368-81336387 Msa0429830:intron 30.0%
!! TCTCATTTTAACAAGAGGTA+TGG - chr3_2:81336484-81336503 None:intergenic 30.0%
!! TGAGATCTCATTTTAACAAG+AGG - chr3_2:81336489-81336508 None:intergenic 30.0%
TTATATGGGCATATTTGGAT+TGG - chr3_2:81336559-81336578 None:intergenic 30.0%
!! ACGTTATAGGATTTTAAAGG+AGG - chr3_2:81336715-81336734 None:intergenic 30.0%
TGATTCTGAGTGATCATATT+TGG + chr3_2:81336783-81336802 Msa0429830:intron 30.0%
AGAACCATAAACATCTTCAA+TGG - chr3_2:81336819-81336838 None:intergenic 30.0%
AGAAAGATTAAGACTGCAAA+AGG - chr3_2:81336856-81336875 None:intergenic 30.0%
! CTTGCGTTCTGTTTTATATT+GGG + chr3_2:81336929-81336948 Msa0429830:intron 30.0%
! AATATCGTTGCAGTTTCTTT+TGG + chr3_2:81337379-81337398 Msa0429830:intron 30.0%
! ATATCGTTGCAGTTTCTTTT+GGG + chr3_2:81337380-81337399 Msa0429830:intron 30.0%
GATTTGATCTTCTCTTTGAA+AGG + chr3_2:81337442-81337461 Msa0429830:intron 30.0%
TAGATTTGATTGTGATCACT+TGG + chr3_2:81337585-81337604 Msa0429830:intron 30.0%
AGATTTGATTGTGATCACTT+GGG + chr3_2:81337586-81337605 Msa0429830:intron 30.0%
AACAGAGATATTAATTGTGG+TGG + chr3_2:81337708-81337727 Msa0429830:intron 30.0%
ATAAAATCGTACACACAACA+GGG - chr3_2:81337847-81337866 None:intergenic 30.0%
AATAAAATCGTACACACAAC+AGG - chr3_2:81337848-81337867 None:intergenic 30.0%
ATTGAAACTACCAAAGAATC+TGG - chr3_2:81337995-81338014 None:intergenic 30.0%
AAATATTGTTGAGAGTGATG+GGG + chr3_2:81338021-81338040 Msa0429830:CDS 30.0%
TAAAAGTCGTGTCAATAACT+TGG + chr3_2:81338078-81338097 Msa0429830:CDS 30.0%
AAAAGTCGTGTCAATAACTT+GGG + chr3_2:81338079-81338098 Msa0429830:CDS 30.0%
CCTTGCACAAAATTTATCTA+TGG - chr3_2:81338205-81338224 None:intergenic 30.0%
! CCATAGATAAATTTTGTGCA+AGG + chr3_2:81338202-81338221 Msa0429830:intron 30.0%
! ATTAAAAATTTGGAACTGGC+AGG + chr3_2:81338228-81338247 Msa0429830:intron 30.0%
TTCTTGAAAACTTTAGCAGA+CGG - chr3_2:81338581-81338600 None:intergenic 30.0%
!!! CTAAGACTGGTTTTAAAAAG+TGG - chr3_2:81338796-81338815 None:intergenic 30.0%
! AGTTAGTTTAAAACTGGTTC+AGG + chr3_2:81338814-81338833 Msa0429830:intron 30.0%
!! ACCGGTTTGTATTTATGAAT+TGG + chr3_2:81338837-81338856 Msa0429830:intron 30.0%
!! GTCTAAGAAGCCTTTTATTT+TGG + chr3_2:81339210-81339229 Msa0429830:intron 30.0%
!!! CTAAGAAGCCTTTTATTTTG+GGG + chr3_2:81339212-81339231 Msa0429830:intron 30.0%
!!! TAAGAAGCCTTTTATTTTGG+GGG + chr3_2:81339213-81339232 Msa0429830:intron 30.0%
AGAATAGCACTTAACTTTCT+AGG + chr3_2:81339275-81339294 Msa0429830:intron 30.0%
TGTTAAGTGTTTATTTGTGG+GGG - chr3_2:81339354-81339373 None:intergenic 30.0%
GTGTTAAGTGTTTATTTGTG+GGG - chr3_2:81339355-81339374 None:intergenic 30.0%
GGTGTTAAGTGTTTATTTGT+GGG - chr3_2:81339356-81339375 None:intergenic 30.0%
!! AACCATAAATTCTAAGATGG+GGG - chr3_2:81339378-81339397 None:intergenic 30.0%
!! CAACCATAAATTCTAAGATG+GGG - chr3_2:81339379-81339398 None:intergenic 30.0%
!! CCAACCATAAATTCTAAGAT+GGG - chr3_2:81339380-81339399 None:intergenic 30.0%
! TCCAACCATAAATTCTAAGA+TGG - chr3_2:81339381-81339400 None:intergenic 30.0%
TGAACAAGTGTTTATAAGTG+GGG - chr3_2:81339448-81339467 None:intergenic 30.0%
CATGAACAAGTGTTTATAAG+TGG - chr3_2:81339450-81339469 None:intergenic 30.0%
ACTCTTTAACAACACTAGTT+TGG + chr3_2:81339491-81339510 Msa0429830:intron 30.0%
!!! GCACTTATCTATTTTTTGGT+CGG - chr3_2:81340111-81340130 None:intergenic 30.0%
!! CTTTCCTTTTTGGTAGATTT+TGG + chr3_2:81340275-81340294 Msa0429830:intron 30.0%
TTGACAACTAGCATTTCTAT+TGG - chr3_2:81340332-81340351 None:intergenic 30.0%
ATAGAAATGCTAGTTGTCAA+TGG + chr3_2:81340332-81340351 Msa0429830:intron 30.0%
ATCAGTCAAAACAGAATACA+AGG - chr3_2:81340621-81340640 None:intergenic 30.0%
TTTGACTGATGTAGTTATGA+TGG + chr3_2:81340631-81340650 Msa0429830:intron 30.0%
! CAAACTTCTTTGTTGTATTC+AGG + chr3_2:81340673-81340692 Msa0429830:intron 30.0%
! AACTTCTTTGTTGTATTCAG+GGG + chr3_2:81340675-81340694 Msa0429830:intron 30.0%
! CATCAAACTGTTTCTCAATT+CGG - chr3_2:81340826-81340845 None:intergenic 30.0%
ATTGCATTGCTTTCTTACTT+AGG + chr3_2:81340846-81340865 Msa0429830:CDS 30.0%
TTGCATTGCTTTCTTACTTA+GGG + chr3_2:81340847-81340866 Msa0429830:CDS 30.0%
GTTGCTAACACAATAATTAG+AGG + chr3_2:81341030-81341049 Msa0429830:intron 30.0%
! ATTAGATTTTACAGTTCAGG+GGG + chr3_2:81341126-81341145 Msa0429830:intron 30.0%
! TGGTAATGTAATTCTTATCC+TGG + chr3_2:81341208-81341227 Msa0429830:intron 30.0%
GGGTAAAATTGTTTGATCTA+AGG + chr3_2:81341392-81341411 Msa0429830:exon 30.0%
CAGTGTTATCTATATGTGAT+TGG + chr3_2:81341743-81341762 Msa0429830:intron 30.0%
! TAAATTGGTAGTTGAGATGA+AGG - chr3_2:81341845-81341864 None:intergenic 30.0%
TGTTTAAGGGTTCACTAAAT+TGG - chr3_2:81341860-81341879 None:intergenic 30.0%
!!! TGATTCTGCACCCATTTTTT+GGG - chr3_2:81332185-81332204 None:intergenic 35.0%
!! AGCGTAGATTTTGTGGATTA+AGG - chr3_2:81332221-81332240 None:intergenic 35.0%
!!! TTAGTTTTGAGAGAAGGAAG+AGG - chr3_2:81332274-81332293 None:intergenic 35.0%
!!! AGTTCGTTAGTTTTGAGAGA+AGG - chr3_2:81332280-81332299 None:intergenic 35.0%
TTTCCTCTTCCTTATTCTCA+TGG + chr3_2:81332338-81332357 Msa0429830:CDS 35.0%
ATTCCATGAGAATAAGGAAG+AGG - chr3_2:81332344-81332363 None:intergenic 35.0%
GTTGTGATTCCATGAGAATA+AGG - chr3_2:81332350-81332369 None:intergenic 35.0%
CTCCGTTATTGATACGAAAA+CGG - chr3_2:81332378-81332397 None:intergenic 35.0%
! GAAGCGAATGAAGACTTTTA+AGG - chr3_2:81332420-81332439 None:intergenic 35.0%
TTCAAAGTAGGATTAGGTCT+CGG - chr3_2:81332517-81332536 None:intergenic 35.0%
AACGCATTCAAAGTAGGATT+AGG - chr3_2:81332523-81332542 None:intergenic 35.0%
GTGTCTATGAATAATGCAGA+TGG + chr3_2:81332700-81332719 Msa0429830:CDS 35.0%
! GTTTTCACTCCAACATTGTT+AGG + chr3_2:81332724-81332743 Msa0429830:CDS 35.0%
TAGAGATGACAATGTTGTGT+TGG + chr3_2:81332874-81332893 Msa0429830:intron 35.0%
CTCAAAATATACATCAGGGA+TGG - chr3_2:81333218-81333237 None:intergenic 35.0%
GAAGAAATGTGTCTTGTACA+AGG + chr3_2:81333304-81333323 Msa0429830:CDS 35.0%
! AAACCTTTATTGGTAACAGG+AGG + chr3_2:81333408-81333427 Msa0429830:intron 35.0%
CATGGTACTTTACATGTATG+TGG + chr3_2:81333441-81333460 Msa0429830:CDS 35.0%
!! AAGCTTGTTGCCATATATTG+AGG + chr3_2:81333465-81333484 Msa0429830:CDS 35.0%
!! AGCTTGTTGCCATATATTGA+GGG + chr3_2:81333466-81333485 Msa0429830:CDS 35.0%
GAATCAAGACCCTCAATATA+TGG - chr3_2:81333478-81333497 None:intergenic 35.0%
ATATTGAGGGTCTTGATTCT+TGG + chr3_2:81333479-81333498 Msa0429830:CDS 35.0%
!! CTTGATTCTTGGCTTTTTGA+CGG + chr3_2:81333490-81333509 Msa0429830:CDS 35.0%
TTGAATCTCTTGATTGCTAG+GGG + chr3_2:81333570-81333589 Msa0429830:intron 35.0%
TGTAGCTTGAAACTCACTTA+AGG + chr3_2:81333743-81333762 Msa0429830:intron 35.0%
GTAGCTTGAAACTCACTTAA+GGG + chr3_2:81333744-81333763 Msa0429830:intron 35.0%
ACTTAAGGGAATCATTTGCA+TGG + chr3_2:81333758-81333777 Msa0429830:intron 35.0%
TAAAGAAGTCTCAGTTACTG+AGG + chr3_2:81334046-81334065 Msa0429830:CDS 35.0%
ATAAATTGTGGACGACAACT+CGG - chr3_2:81334129-81334148 None:intergenic 35.0%
TTGTCGTCCACAATTTATGT+CGG + chr3_2:81334131-81334150 Msa0429830:CDS 35.0%
!! GCTAAGTCAATTATTTCTGC+TGG + chr3_2:81334287-81334306 Msa0429830:CDS 35.0%
!! GGCAGAAGTATTTACAAACA+TGG - chr3_2:81334496-81334515 None:intergenic 35.0%
AATACTTCTGCCAAGATGAT+TGG + chr3_2:81334504-81334523 Msa0429830:CDS 35.0%
TACCAAATCTTCTCTGAGTA+AGG - chr3_2:81334614-81334633 None:intergenic 35.0%
TTTCGACAAACGGTAATAAC+GGG - chr3_2:81334779-81334798 None:intergenic 35.0%
ACCGTTTGTCGAAAAACAAT+CGG + chr3_2:81334785-81334804 Msa0429830:CDS 35.0%
!! TCCGATTGTTTTTCGACAAA+CGG - chr3_2:81334789-81334808 None:intergenic 35.0%
GAAAAACAATCGGAAACAAC+AGG + chr3_2:81334795-81334814 Msa0429830:CDS 35.0%
TTGCCTTCTTTAAATGACGA+GGG + chr3_2:81334857-81334876 Msa0429830:CDS 35.0%
AAACCCTCGTCATTTAAAGA+AGG - chr3_2:81334863-81334882 None:intergenic 35.0%
AAATGACGAGGGTTTAAGAA+AGG + chr3_2:81334868-81334887 Msa0429830:CDS 35.0%
ATCCAAATTCATTCACTCAC+AGG + chr3_2:81334967-81334986 Msa0429830:CDS 35.0%
ATCCTGTGAGTGAATGAATT+TGG - chr3_2:81334972-81334991 None:intergenic 35.0%
!! ATTCACCTGTTTCTGAATGT+AGG - chr3_2:81335271-81335290 None:intergenic 35.0%
! GCAATATACTTGTTAGGTTC+AGG + chr3_2:81335442-81335461 Msa0429830:CDS 35.0%
! GTTGATAAACTTTGAGCTAC+AGG + chr3_2:81335508-81335527 Msa0429830:intron 35.0%
TTGCCCTATATATTGTTTGG+TGG + chr3_2:81335569-81335588 Msa0429830:intron 35.0%
!!! CGTTTTGTTTTTGGGACAAA+AGG + chr3_2:81335860-81335879 Msa0429830:intron 35.0%
!! TTTGTAAGTTTAGGTTGGGT+AGG + chr3_2:81336170-81336189 Msa0429830:intron 35.0%
!! TTGTAAGTTTAGGTTGGGTA+GGG + chr3_2:81336171-81336190 Msa0429830:intron 35.0%
!! AACCGTCATTTTCGATAAGT+TGG + chr3_2:81336269-81336288 Msa0429830:CDS 35.0%
! TTGCTGTTAGAATTTGAGTC+AGG + chr3_2:81336391-81336410 Msa0429830:intron 35.0%
TGCTGTTAGAATTTGAGTCA+GGG + chr3_2:81336392-81336411 Msa0429830:intron 35.0%
CAGAATCATGACAGAGTAAA+TGG - chr3_2:81336771-81336790 None:intergenic 35.0%
TGCTCCATTGAAGATGTTTA+TGG + chr3_2:81336812-81336831 Msa0429830:intron 35.0%
! GCATACATGTTTCTATCTAC+TGG + chr3_2:81336888-81336907 Msa0429830:intron 35.0%
CCAATATAAAACAGAACGCA+AGG - chr3_2:81336931-81336950 None:intergenic 35.0%
! CCTTGCGTTCTGTTTTATAT+TGG + chr3_2:81336928-81336947 Msa0429830:intron 35.0%
AAAAGTGAAAGAACCTGTCT+GGG + chr3_2:81336960-81336979 Msa0429830:intron 35.0%
ATCCTATTTGTGGCATTGTT+TGG - chr3_2:81337007-81337026 None:intergenic 35.0%
CACAAATAGGATTATCCCTA+GGG + chr3_2:81337015-81337034 Msa0429830:intron 35.0%
ACAAATAGGATTATCCCTAG+GGG + chr3_2:81337016-81337035 Msa0429830:intron 35.0%
!! GTGACTTGTTCTAAACAAGT+TGG + chr3_2:81337326-81337345 Msa0429830:intron 35.0%
CTTAGTAAGCTTAAGCTTGA+GGG + chr3_2:81337488-81337507 Msa0429830:intron 35.0%
TTAGTAAGCTTAAGCTTGAG+GGG + chr3_2:81337489-81337508 Msa0429830:intron 35.0%
AAAGTCGTGTCAATAACTTG+GGG + chr3_2:81338080-81338099 Msa0429830:CDS 35.0%
GTAAAGTTAAGTCAGATACC+TGG - chr3_2:81338306-81338325 None:intergenic 35.0%
AAAGGCTAAGAAAAAGAGAG+AGG - chr3_2:81338332-81338351 None:intergenic 35.0%
GATAGATGAAGGGAACTAAA+AGG - chr3_2:81338350-81338369 None:intergenic 35.0%
ATCAGCATCTGATAGATGAA+GGG - chr3_2:81338360-81338379 None:intergenic 35.0%
TATTAGATAAAGTGCGGAGA+TGG + chr3_2:81338496-81338515 Msa0429830:CDS 35.0%
! CAGAAAACATCATTGGTTAG+TGG + chr3_2:81338704-81338723 Msa0429830:CDS 35.0%
!! GAAAAGCATCCACAAAATGA+AGG - chr3_2:81338740-81338759 None:intergenic 35.0%
! TGCTTTTCACCAATATGTGA+TGG + chr3_2:81338752-81338771 Msa0429830:CDS 35.0%
! TTTGTTAATTTTTCCTGGCG+CGG + chr3_2:81338957-81338976 Msa0429830:intron 35.0%
CTGGAAGTTGAAGAAGTTAA+AGG + chr3_2:81338983-81339002 Msa0429830:intron 35.0%
! GCTAGCTTAACAAATTGACT+TGG - chr3_2:81339042-81339061 None:intergenic 35.0%
GCTAGCTGTAATTAGAAGAA+TGG + chr3_2:81339056-81339075 Msa0429830:intron 35.0%
! TACCGTATCAGGACTATTTT+CGG - chr3_2:81339082-81339101 None:intergenic 35.0%
! ACAAAGTGCTTAAATTCGGA+TGG + chr3_2:81339110-81339129 Msa0429830:intron 35.0%
!! TTTCTCTTTTGATGGCTACA+TGG + chr3_2:81339143-81339162 Msa0429830:intron 35.0%
GCTACATGGTCAAGAATATT+CGG + chr3_2:81339157-81339176 Msa0429830:intron 35.0%
! TTTTGTGCCCCCAAAATAAA+AGG - chr3_2:81339223-81339242 None:intergenic 35.0%
GGGTGTTAAGTGTTTATTTG+TGG - chr3_2:81339357-81339376 None:intergenic 35.0%
!! ACCATAAATTCTAAGATGGG+GGG - chr3_2:81339377-81339396 None:intergenic 35.0%
CCCATCTTAGAATTTATGGT+TGG + chr3_2:81339377-81339396 Msa0429830:intron 35.0%
AACAAGTGTTTATAAGTGGG+GGG - chr3_2:81339446-81339465 None:intergenic 35.0%
GAACAAGTGTTTATAAGTGG+GGG - chr3_2:81339447-81339466 None:intergenic 35.0%
! GTTTGGTTCAGCACAATTTA+TGG + chr3_2:81339508-81339527 Msa0429830:intron 35.0%
GGGCTTAAGAAAGAATATTG+AGG + chr3_2:81339773-81339792 Msa0429830:intron 35.0%
GTGAATTTCTATTTCATGCG+TGG - chr3_2:81339803-81339822 None:intergenic 35.0%
TGTATGTATGTGTGTATGTG+TGG + chr3_2:81340189-81340208 Msa0429830:intron 35.0%
CTACACTGCTTAAAATTCCT+GGG + chr3_2:81340213-81340232 Msa0429830:intron 35.0%
!! TCCTTTTTGGTAGATTTTGG+AGG + chr3_2:81340278-81340297 Msa0429830:intron 35.0%
AGAAGGGGAGAATATAACAT+TGG + chr3_2:81340302-81340321 Msa0429830:intron 35.0%
CAACTAGCATTTCTATTGGT+CGG - chr3_2:81340328-81340347 None:intergenic 35.0%
GTACAAGTGTATGACTAATG+TGG - chr3_2:81340363-81340382 None:intergenic 35.0%
TAGTCATACACTTGTACTCA+TGG + chr3_2:81340366-81340385 Msa0429830:intron 35.0%
! ACTATGTGAAAGTATGACAG+TGG + chr3_2:81340470-81340489 Msa0429830:CDS 35.0%
CTTACATGTTGTCAATTCAG+CGG + chr3_2:81340529-81340548 Msa0429830:CDS 35.0%
CAGTGAATTACCAGTTTATC+AGG - chr3_2:81340570-81340589 None:intergenic 35.0%
! ACTTCTTTGTTGTATTCAGG+GGG + chr3_2:81340676-81340695 Msa0429830:intron 35.0%
AACCAAGGATGATATTAACG+CGG - chr3_2:81340715-81340734 None:intergenic 35.0%
! AGAAGTCTAAAGCTAAACCA+AGG - chr3_2:81340730-81340749 None:intergenic 35.0%
CAACAAACATTAAAAAGCGG+CGG + chr3_2:81340758-81340777 Msa0429830:CDS 35.0%
TTTCTAACTACACTGCTACT+CGG + chr3_2:81340896-81340915 Msa0429830:intron 35.0%
!! ACTAGCTCTACTTTATGATC+TGG + chr3_2:81340923-81340942 Msa0429830:intron 35.0%
! GATCAAACAATTTTACCCAG+AGG - chr3_2:81341390-81341409 None:intergenic 35.0%
AGTGAATAAGACATTCTCTC+AGG - chr3_2:81341483-81341502 None:intergenic 35.0%
TGAGGGTCAAAAAAGTTTGA+AGG + chr3_2:81341519-81341538 Msa0429830:three_prime_UTR 35.0%
GTGCAGAAGTAAAAAAGGAA+GGG - chr3_2:81341724-81341743 None:intergenic 35.0%
TGTGCAGAAGTAAAAAAGGA+AGG - chr3_2:81341725-81341744 None:intergenic 35.0%
ACACTGTGCAGAAGTAAAAA+AGG - chr3_2:81341729-81341748 None:intergenic 35.0%
!!! GTGATTCTGCACCCATTTTT+TGG - chr3_2:81332186-81332205 None:intergenic 40.0%
! AGAATGGAGCGTAGATTTTG+TGG - chr3_2:81332228-81332247 None:intergenic 40.0%
! GCGTTTTACGAATGCTACAA+GGG + chr3_2:81332314-81332333 Msa0429830:CDS 40.0%
GCAACAAACGCATTCAAAGT+AGG - chr3_2:81332529-81332548 None:intergenic 40.0%
! GGTTTGATTTCTCTGCGATT+CGG + chr3_2:81332570-81332589 Msa0429830:intron 40.0%
!! ATTTCTCTGCGATTCGGTTT+CGG + chr3_2:81332576-81332595 Msa0429830:intron 40.0%
! TTTGAATTGTGGTGATGCAG+CGG + chr3_2:81332650-81332669 Msa0429830:intron 40.0%
!! TGTTGACTTAGTCTTTGCTC+TGG + chr3_2:81333160-81333179 Msa0429830:intron 40.0%
CCTCATGAACTATTCGCAAT+AGG - chr3_2:81333195-81333214 None:intergenic 40.0%
CCTATTGCGAATAGTTCATG+AGG + chr3_2:81333192-81333211 Msa0429830:CDS 40.0%
GAAATGTGTCTTGTACAAGG+TGG + chr3_2:81333307-81333326 Msa0429830:CDS 40.0%
CTTCCTCCTGTTACCAATAA+AGG - chr3_2:81333414-81333433 None:intergenic 40.0%
! ACTTGATGATCCTTCTGATG+AGG + chr3_2:81333516-81333535 Msa0429830:CDS 40.0%
GATCATCTTACCTCATCAGA+AGG - chr3_2:81333529-81333548 None:intergenic 40.0%
GTAAGATGATCCTTCTGATG+AGG + chr3_2:81333538-81333557 Msa0429830:intron 40.0%
AATACGCTACAGAAAGCTGT+TGG - chr3_2:81333925-81333944 None:intergenic 40.0%
GGAATCACCGACATAAATTG+TGG - chr3_2:81334141-81334160 None:intergenic 40.0%
TCCTTCTTCTCATTTGATGC+TGG - chr3_2:81334167-81334186 None:intergenic 40.0%
TACATGCTGCTAAGGAACTT+GGG - chr3_2:81334340-81334359 None:intergenic 40.0%
GTATCACTAGCTGGACTTAT+TGG + chr3_2:81334461-81334480 Msa0429830:CDS 40.0%
CAGATTCATGCCAATCATCT+TGG - chr3_2:81334517-81334536 None:intergenic 40.0%
CAAATCTTCTCTGAGTAAGG+TGG - chr3_2:81334611-81334630 None:intergenic 40.0%
CACCTTACTCAGAGAAGATT+TGG + chr3_2:81334609-81334628 Msa0429830:CDS 40.0%
AATGGCAATGGTGATTCAAG+AGG + chr3_2:81334701-81334720 Msa0429830:CDS 40.0%
ATGGCAATGGTGATTCAAGA+GGG + chr3_2:81334702-81334721 Msa0429830:CDS 40.0%
CTTGCCTTCTTTAAATGACG+AGG + chr3_2:81334856-81334875 Msa0429830:CDS 40.0%
AGTAGAAATACCTGAACTGC+AGG - chr3_2:81335040-81335059 None:intergenic 40.0%
GCATGAGTAGCATTTGATGA+AGG + chr3_2:81335065-81335084 Msa0429830:intron 40.0%
AAAGGCAAGAACTCTGATAC+AGG - chr3_2:81335144-81335163 None:intergenic 40.0%
TTCCTTCAGAAGTTCTTCAC+TGG + chr3_2:81335181-81335200 Msa0429830:CDS 40.0%
ATCCAGTGAAGAACTTCTGA+AGG - chr3_2:81335186-81335205 None:intergenic 40.0%
TGCATAATAACCAGAGGTAG+TGG - chr3_2:81335234-81335253 None:intergenic 40.0%
CAGTACTGCATAATAACCAG+AGG - chr3_2:81335240-81335259 None:intergenic 40.0%
AACTGCCTACATTCAGAAAC+AGG + chr3_2:81335263-81335282 Msa0429830:CDS 40.0%
GATGAATGAATGGAGGTTGA+TGG + chr3_2:81335399-81335418 Msa0429830:CDS 40.0%
CTGCGAGCAATATACTTGTT+AGG + chr3_2:81335436-81335455 Msa0429830:CDS 40.0%
! GTTGTGCCTCGATTGTTATT+TGG + chr3_2:81335925-81335944 Msa0429830:intron 40.0%
!! TGTAAGTTTAGGTTGGGTAG+GGG + chr3_2:81336172-81336191 Msa0429830:intron 40.0%
AGTTGGATAAGGGTGAAACA+TGG + chr3_2:81336286-81336305 Msa0429830:CDS 40.0%
GTTGGATAAGGGTGAAACAT+GGG + chr3_2:81336287-81336306 Msa0429830:CDS 40.0%
!!! CATCTCTTGAGCTAGCTTTT+GGG - chr3_2:81336428-81336447 None:intergenic 40.0%
CAAAAGCTAGCTCAAGAGAT+GGG + chr3_2:81336427-81336446 Msa0429830:intron 40.0%
AAAAGCTAGCTCAAGAGATG+GGG + chr3_2:81336428-81336447 Msa0429830:intron 40.0%
ACGCAAGGCAGAATTTGAAA+TGG - chr3_2:81336916-81336935 None:intergenic 40.0%
GAAAAGTGAAAGAACCTGTC+TGG + chr3_2:81336959-81336978 Msa0429830:intron 40.0%
GTCCAAACAATGCCACAAAT+AGG + chr3_2:81337002-81337021 Msa0429830:intron 40.0%
CCTAGGGATAATCCTATTTG+TGG - chr3_2:81337017-81337036 None:intergenic 40.0%
CCACAAATAGGATTATCCCT+AGG + chr3_2:81337014-81337033 Msa0429830:intron 40.0%
CTTGACTTTGGTTAGGCAAA+GGG - chr3_2:81337189-81337208 None:intergenic 40.0%
ACTCAACCTTGACTTTGGTT+AGG - chr3_2:81337196-81337215 None:intergenic 40.0%
CAATCACTCAACCTTGACTT+TGG - chr3_2:81337201-81337220 None:intergenic 40.0%
CAAAGTCAAGGTTGAGTGAT+TGG + chr3_2:81337199-81337218 Msa0429830:intron 40.0%
ACTAGAGGTTGTCATTCACT+TGG - chr3_2:81337357-81337376 None:intergenic 40.0%
GCTTAGTAAGCTTAAGCTTG+AGG + chr3_2:81337487-81337506 Msa0429830:intron 40.0%
TAGTAAGCTTAAGCTTGAGG+GGG + chr3_2:81337490-81337509 Msa0429830:intron 40.0%
CTTTGCCAAACCATTATAGG+AGG - chr3_2:81337737-81337756 None:intergenic 40.0%
CCACTTTGCCAAACCATTAT+AGG - chr3_2:81337740-81337759 None:intergenic 40.0%
! CCTATAATGGTTTGGCAAAG+TGG + chr3_2:81337737-81337756 Msa0429830:intron 40.0%
GTTAAGTGCTCCAGATTCTT+TGG + chr3_2:81337982-81338001 Msa0429830:CDS 40.0%
GTCAATAACTTGGGGATGAA+CGG + chr3_2:81338088-81338107 Msa0429830:CDS 40.0%
GTGTTTGCAATGAGTTCAAG+AGG - chr3_2:81338262-81338281 None:intergenic 40.0%
TGAACTCATTGCAAACACAG+AGG + chr3_2:81338264-81338283 Msa0429830:CDS 40.0%
! GGCAATTAAGAAGTACAACC+AGG + chr3_2:81338285-81338304 Msa0429830:CDS 40.0%
CATCAGCATCTGATAGATGA+AGG - chr3_2:81338361-81338380 None:intergenic 40.0%
AAAAGAACAAACCAGAGAGC+AGG - chr3_2:81338390-81338409 None:intergenic 40.0%
CTCGTGTATATTAGGTGATG+CGG + chr3_2:81338442-81338461 Msa0429830:intron 40.0%
CATGTTCCACTGAAGAGAAA+TGG - chr3_2:81338554-81338573 None:intergenic 40.0%
AAACTGCAATCATCCTTTGC+AGG + chr3_2:81338659-81338678 Msa0429830:intron 40.0%
AACTGCAATCATCCTTTGCA+GGG + chr3_2:81338660-81338679 Msa0429830:intron 40.0%
! GCAGAAACTCCTTCATTTTG+TGG + chr3_2:81338728-81338747 Msa0429830:CDS 40.0%
!! TTCACCAATATGTGATGGAC+CGG + chr3_2:81338757-81338776 Msa0429830:CDS 40.0%
AAGTGGTGTATGTTCATACC+CGG - chr3_2:81338779-81338798 None:intergenic 40.0%
! GTTTAAAACTGGTTCAGGAC+CGG + chr3_2:81338819-81338838 Msa0429830:intron 40.0%
AGGGAGAGAGTAAATCGTAA+TGG - chr3_2:81338867-81338886 None:intergenic 40.0%
ACCCCCCATCTTAGAATTTA+TGG + chr3_2:81339373-81339392 Msa0429830:intron 40.0%
GTTGTTAAAGAGTCCCACAT+TGG - chr3_2:81339484-81339503 None:intergenic 40.0%
TACCGCCTAATACACAAGAA+AGG + chr3_2:81339670-81339689 Msa0429830:intron 40.0%
ACAGGCCTTTCTTGTGTATT+AGG - chr3_2:81339678-81339697 None:intergenic 40.0%
! CCAGGAATTTTAAGCAGTGT+AGG - chr3_2:81340215-81340234 None:intergenic 40.0%
CCTACACTGCTTAAAATTCC+TGG + chr3_2:81340212-81340231 Msa0429830:intron 40.0%
! TCCGTCCTTACTTGATAGTA+AGG + chr3_2:81340236-81340255 Msa0429830:intron 40.0%
CCCTTACTATCAAGTAAGGA+CGG - chr3_2:81340240-81340259 None:intergenic 40.0%
! CCGTCCTTACTTGATAGTAA+GGG + chr3_2:81340237-81340256 Msa0429830:intron 40.0%
GCCTCCAAAATCTACCAAAA+AGG - chr3_2:81340282-81340301 None:intergenic 40.0%
!! GTACTCATGGTTCTGCATTT+TGG + chr3_2:81340379-81340398 Msa0429830:intron 40.0%
!! ATGGTTCTGCATTTTGGCAA+CGG + chr3_2:81340385-81340404 Msa0429830:intron 40.0%
TGTCGCTACAATTTGTATGC+AGG + chr3_2:81340425-81340444 Msa0429830:intron 40.0%
AATGACCTCATCCAGAGATT+TGG - chr3_2:81340496-81340515 None:intergenic 40.0%
TGACAACATGTAAGCCTCAT+GGG - chr3_2:81340523-81340542 None:intergenic 40.0%
TTGACAACATGTAAGCCTCA+TGG - chr3_2:81340524-81340543 None:intergenic 40.0%
CTTTGTGGTTCCTGATAAAC+TGG + chr3_2:81340557-81340576 Msa0429830:CDS 40.0%
ATTCACTGTGTCTCAGAAGT+TGG + chr3_2:81340582-81340601 Msa0429830:intron 40.0%
TTCACTGTGTCTCAGAAGTT+GGG + chr3_2:81340583-81340602 Msa0429830:intron 40.0%
TGTTAGCAACTCTTCAAGCA+GGG - chr3_2:81341020-81341039 None:intergenic 40.0%
AATTCTTATCCTGGCGTTTC+AGG + chr3_2:81341217-81341236 Msa0429830:intron 40.0%
TTTCCCTCATTTGGCTGATT+TGG + chr3_2:81341268-81341287 Msa0429830:CDS 40.0%
TGACCAAATCAGCCAAATGA+GGG - chr3_2:81341274-81341293 None:intergenic 40.0%
GGGAATTTAATGACCACATC+TGG + chr3_2:81341332-81341351 Msa0429830:CDS 40.0%
AATCTTGAAGCAACACTTCC+CGG - chr3_2:81341359-81341378 None:intergenic 40.0%
!! GGAAGTGTTGCTTCAAGATT+GGG + chr3_2:81341359-81341378 Msa0429830:CDS 40.0%
!! GAAGTGTTGCTTCAAGATTG+GGG + chr3_2:81341360-81341379 Msa0429830:CDS 40.0%
TTCGTCTTTGAGCTCAATGA+GGG + chr3_2:81341502-81341521 Msa0429830:three_prime_UTR 40.0%
GGCTTTCACAATCGTTTACA+AGG - chr3_2:81341687-81341706 None:intergenic 40.0%
ATGAAGGAGTTTCAGAGGAT+AGG - chr3_2:81341829-81341848 None:intergenic 40.0%
TTGAGATGAAGGAGTTTCAG+AGG - chr3_2:81341834-81341853 None:intergenic 40.0%
! TGTGGATTAAGGTTTGGGGA+TGG - chr3_2:81332210-81332229 None:intergenic 45.0%
AAGGGGAATTCGTTGGAGAA+TGG - chr3_2:81332244-81332263 None:intergenic 45.0%
AACGAACTTGAACTCGTTCG+AGG + chr3_2:81332292-81332311 Msa0429830:CDS 45.0%
! GGCGTTTTACGAATGCTACA+AGG + chr3_2:81332313-81332332 Msa0429830:CDS 45.0%
CTCAACGATTTGAAGACACG+TGG - chr3_2:81332464-81332483 None:intergenic 45.0%
! TTGTTGCTTCTGCTTCTTCG+TGG + chr3_2:81332542-81332561 Msa0429830:CDS 45.0%
TTCTGCTTCTTCGTGGCTTA+AGG + chr3_2:81332549-81332568 Msa0429830:CDS 45.0%
GTTGAGGAATGTTGCGTTGA+AGG + chr3_2:81332672-81332691 Msa0429830:CDS 45.0%
CGCTTAACTTATGTTCCTGC+TGG - chr3_2:81332851-81332870 None:intergenic 45.0%
ACAGGAGGAAGCTTATCTCA+TGG + chr3_2:81333423-81333442 Msa0429830:intron 45.0%
AGTTACTGAGGCTGAGTTCT+GGG + chr3_2:81334058-81334077 Msa0429830:CDS 45.0%
CTTCTCATTTGATGCTGGCA+TGG - chr3_2:81334162-81334181 None:intergenic 45.0%
GCCAGCATCAAATGAGAAGA+AGG + chr3_2:81334163-81334182 Msa0429830:CDS 45.0%
AGAAGAAGGAAATGGGCATG+AGG + chr3_2:81334177-81334196 Msa0429830:CDS 45.0%
GAAGAAGGAAATGGGCATGA+GGG + chr3_2:81334178-81334197 Msa0429830:CDS 45.0%
ACATGCTGCTAAGGAACTTG+GGG - chr3_2:81334339-81334358 None:intergenic 45.0%
CTACATGCTGCTAAGGAACT+TGG - chr3_2:81334341-81334360 None:intergenic 45.0%
TCTGTCTCCTTCTCATAGAG+TGG + chr3_2:81334409-81334428 Msa0429830:CDS 45.0%
TCTCCTTCTCATAGAGTGGT+TGG + chr3_2:81334413-81334432 Msa0429830:CDS 45.0%
CTCCTTCTCATAGAGTGGTT+GGG + chr3_2:81334414-81334433 Msa0429830:CDS 45.0%
CTAGCTGGACTTATTGGTCA+TGG + chr3_2:81334467-81334486 Msa0429830:CDS 45.0%
TGGCAATGGTGATTCAAGAG+GGG + chr3_2:81334703-81334722 Msa0429830:CDS 45.0%
TGAACTGCAGGCAAAATGGT+GGG - chr3_2:81335028-81335047 None:intergenic 45.0%
TACCTGAACTGCAGGCAAAA+TGG - chr3_2:81335032-81335051 None:intergenic 45.0%
!! AGAGTGCTGTTTCTCTGGAA+AGG - chr3_2:81335162-81335181 None:intergenic 45.0%
!! AAGGAAGAGTGCTGTTTCTC+TGG - chr3_2:81335167-81335186 None:intergenic 45.0%
! AGAGAGCATAGTGATTACGC+AGG + chr3_2:81335810-81335829 Msa0429830:intron 45.0%
TGGGACAAAAGGTTGTGCTT+TGG + chr3_2:81335871-81335890 Msa0429830:intron 45.0%
!!! CCATCTCTTGAGCTAGCTTT+TGG - chr3_2:81336429-81336448 None:intergenic 45.0%
CCAAAAGCTAGCTCAAGAGA+TGG + chr3_2:81336426-81336445 Msa0429830:intron 45.0%
AATAGGATTATCCCTAGGGG+AGG + chr3_2:81337019-81337038 Msa0429830:intron 45.0%
ATAGGATTATCCCTAGGGGA+GGG + chr3_2:81337020-81337039 Msa0429830:intron 45.0%
TTGGTTAGGCAAAGGGACAT+GGG - chr3_2:81337182-81337201 None:intergenic 45.0%
TTTGGTTAGGCAAAGGGACA+TGG - chr3_2:81337183-81337202 None:intergenic 45.0%
CCTTGACTTTGGTTAGGCAA+AGG - chr3_2:81337190-81337209 None:intergenic 45.0%
CCTTTGCCTAACCAAAGTCA+AGG + chr3_2:81337187-81337206 Msa0429830:intron 45.0%
CTTGACGACAGTCAATCAAC+AGG - chr3_2:81337276-81337295 None:intergenic 45.0%
! CTGTTGATTGACTGTCGTCA+AGG + chr3_2:81337274-81337293 Msa0429830:intron 45.0%
CTGCAACGATATTGCACTAG+AGG - chr3_2:81337372-81337391 None:intergenic 45.0%
GGCTACCTCCTATAATGGTT+TGG + chr3_2:81337729-81337748 Msa0429830:intron 45.0%
! TTAGAACACAAAGGCGCAGA+AGG - chr3_2:81337887-81337906 None:intergenic 45.0%
!!! TAGCACGTCTGGTTCTGTTT+TGG + chr3_2:81338048-81338067 Msa0429830:CDS 45.0%
!!! AGCACGTCTGGTTCTGTTTT+GGG + chr3_2:81338049-81338068 Msa0429830:CDS 45.0%
TGATGTTTCTTCCTGCTCTC+TGG + chr3_2:81338376-81338395 Msa0429830:intron 45.0%
! GGTGATGCGGTTTTTGTTGA+AGG + chr3_2:81338455-81338474 Msa0429830:intron 45.0%
ATAAAGTGCGGAGATGGATG+TGG + chr3_2:81338502-81338521 Msa0429830:CDS 45.0%
TACTCGCCATTTCTCTTCAG+TGG + chr3_2:81338545-81338564 Msa0429830:intron 45.0%
CAATCATCCTTTGCAGGGTA+GGG + chr3_2:81338665-81338684 Msa0429830:intron 45.0%
AATCATCCTTTGCAGGGTAG+GGG + chr3_2:81338666-81338685 Msa0429830:intron 45.0%
!! TCACCAATATGTGATGGACC+GGG + chr3_2:81338758-81338777 Msa0429830:CDS 45.0%
ATACCCGGTCCATCACATAT+TGG - chr3_2:81338764-81338783 None:intergenic 45.0%
GAGTGTGTGTGTGAGAATGA+GGG - chr3_2:81338908-81338927 None:intergenic 45.0%
TGAGTGTGTGTGTGAGAATG+AGG - chr3_2:81338909-81338928 None:intergenic 45.0%
GGCCGAAAATAGTCCTGATA+CGG + chr3_2:81339077-81339096 Msa0429830:intron 45.0%
!!! CGCTTTTTTGGGGTTGTGTT+CGG - chr3_2:81339404-81339423 None:intergenic 45.0%
CGAACACAACCCCAAAAAAG+CGG + chr3_2:81339402-81339421 Msa0429830:intron 45.0%
!!! ACCTCACAAGCCGCTTTTTT+GGG - chr3_2:81339415-81339434 None:intergenic 45.0%
ATGCCATCTCTCATCCAATG+TGG + chr3_2:81339467-81339486 Msa0429830:intron 45.0%
TGCCATCTCTCATCCAATGT+GGG + chr3_2:81339468-81339487 Msa0429830:intron 45.0%
!! TATCATGTAGGGGGTGTTCA+TGG - chr3_2:81339535-81339554 None:intergenic 45.0%
! GACGCACTTGTTGCTATATG+CGG + chr3_2:81339564-81339583 Msa0429830:intron 45.0%
! ACGCACTTGTTGCTATATGC+GGG + chr3_2:81339565-81339584 Msa0429830:intron 45.0%
ACTTAACTAAGTGAGGGCCA+AGG - chr3_2:81339591-81339610 None:intergenic 45.0%
! ATGTGTGGGTAGTGTTTCTG+TGG + chr3_2:81339633-81339652 Msa0429830:intron 45.0%
! GGGTAGTGTTTCTGTGGTAA+TGG + chr3_2:81339639-81339658 Msa0429830:intron 45.0%
GGCCTTTCTTGTGTATTAGG+CGG - chr3_2:81339675-81339694 None:intergenic 45.0%
GCAGCCCTTACTATCAAGTA+AGG - chr3_2:81340244-81340263 None:intergenic 45.0%
!! TGGTAGATTTTGGAGGCAGA+AGG + chr3_2:81340285-81340304 Msa0429830:intron 45.0%
!! GGTAGATTTTGGAGGCAGAA+GGG + chr3_2:81340286-81340305 Msa0429830:intron 45.0%
!! GTAGATTTTGGAGGCAGAAG+GGG + chr3_2:81340287-81340306 Msa0429830:intron 45.0%
TAGCGACAGAAAACACACTC+AGG - chr3_2:81340413-81340432 None:intergenic 45.0%
TATGACAGTGGCCAAATCTC+TGG + chr3_2:81340482-81340501 Msa0429830:CDS 45.0%
AAGGATGATATTAACGCGGC+TGG - chr3_2:81340711-81340730 None:intergenic 45.0%
AGCCGCGTTAATATCATCCT+TGG + chr3_2:81340710-81340729 Msa0429830:CDS 45.0%
!! CTGTTTCTGCAATCAAGGCA+AGG + chr3_2:81340783-81340802 Msa0429830:CDS 45.0%
AATCAAGGCAAGGTGTGAGA+TGG + chr3_2:81340793-81340812 Msa0429830:CDS 45.0%
GTTAGCAACTCTTCAAGCAG+GGG - chr3_2:81341019-81341038 None:intergenic 45.0%
GTGTTAGCAACTCTTCAAGC+AGG - chr3_2:81341021-81341040 None:intergenic 45.0%
AAGATAAGACCTGAAACGCC+AGG - chr3_2:81341229-81341248 None:intergenic 45.0%
! TGTAGGGCATTTCCCTCATT+TGG + chr3_2:81341259-81341278 Msa0429830:CDS 45.0%
GTGACCAAATCAGCCAAATG+AGG - chr3_2:81341275-81341294 None:intergenic 45.0%
TTTAATGACCACATCTGGCC+CGG + chr3_2:81341337-81341356 Msa0429830:CDS 45.0%
ATCTTGAAGCAACACTTCCC+GGG - chr3_2:81341358-81341377 None:intergenic 45.0%
!! GGGAAGTGTTGCTTCAAGAT+TGG + chr3_2:81341358-81341377 Msa0429830:CDS 45.0%
CTTCGTCTTTGAGCTCAATG+AGG + chr3_2:81341501-81341520 Msa0429830:three_prime_UTR 45.0%
ACAGAAGTGGCCTGCAATTA+CGG - chr3_2:81341564-81341583 None:intergenic 45.0%
GGAAGGGTAAAAACTAGCAC+AGG - chr3_2:81341708-81341727 None:intergenic 45.0%
TTCATCCCGCGCCCAAAAAA+TGG + chr3_2:81332171-81332190 Msa0429830:exon 50.0%
TCATCCCGCGCCCAAAAAAT+GGG + chr3_2:81332172-81332191 Msa0429830:exon 50.0%
AGTTGCGAAGGGGAATTCGT+TGG - chr3_2:81332251-81332270 None:intergenic 50.0%
AAGGAAGAGGAGTTGCGAAG+GGG - chr3_2:81332261-81332280 None:intergenic 50.0%
GAAGGAAGAGGAGTTGCGAA+GGG - chr3_2:81332262-81332281 None:intergenic 50.0%
AGAAGGAAGAGGAGTTGCGA+AGG - chr3_2:81332263-81332282 None:intergenic 50.0%
GAGGAATGTTGCGTTGAAGG+AGG + chr3_2:81332675-81332694 Msa0429830:CDS 50.0%
! TGTGTGCGGGATAGAGTGTT+GGG + chr3_2:81332815-81332834 Msa0429830:intron 50.0%
ATCTGTACCTGCAGCAGACT+TGG + chr3_2:81333246-81333265 Msa0429830:CDS 50.0%
CAGTTACTGAGGCTGAGTTC+TGG + chr3_2:81334057-81334076 Msa0429830:CDS 50.0%
TCCTTAGCAGCATGTAGCAG+AGG + chr3_2:81334344-81334363 Msa0429830:CDS 50.0%
TCCTCTGCTACATGCTGCTA+AGG - chr3_2:81334348-81334367 None:intergenic 50.0%
AGCCCAACCACTCTATGAGA+AGG - chr3_2:81334419-81334438 None:intergenic 50.0%
CTTCTCTGAGTAAGGTGGAG+CGG - chr3_2:81334606-81334625 None:intergenic 50.0%
! GCAGGCAAAATGGTGGGAAA+AGG - chr3_2:81335022-81335041 None:intergenic 50.0%
CTGAACTGCAGGCAAAATGG+TGG - chr3_2:81335029-81335048 None:intergenic 50.0%
! CACCATTTTGCCTGCAGTTC+AGG + chr3_2:81335027-81335046 Msa0429830:CDS 50.0%
!! GAGGTAGTGGAGTCGTTCTT+AGG - chr3_2:81335221-81335240 None:intergenic 50.0%
AAGAACGACTCCACTACCTC+TGG + chr3_2:81335221-81335240 Msa0429830:CDS 50.0%
AGGTTGGGTAGGGGTCATAT+TGG + chr3_2:81336181-81336200 Msa0429830:intron 50.0%
TGAAAGAACCTGTCTGGGAG+AGG + chr3_2:81336965-81336984 Msa0429830:intron 50.0%
GTAACATGTTCCCTCCCCTA+GGG - chr3_2:81337033-81337052 None:intergenic 50.0%
TGTAACATGTTCCCTCCCCT+AGG - chr3_2:81337034-81337053 None:intergenic 50.0%
GGACATGGGTAGAATGCAAC+AGG - chr3_2:81337168-81337187 None:intergenic 50.0%
CAAGGTTGAGTGATTGGCAC+CGG + chr3_2:81337205-81337224 Msa0429830:intron 50.0%
TGGGACATGTCATCTGTGAC+CGG - chr3_2:81337227-81337246 None:intergenic 50.0%
GTGGTGGCTACCTCCTATAA+TGG + chr3_2:81337724-81337743 Msa0429830:intron 50.0%
! TTTGGAACTGGCAGGTACCT+TGG + chr3_2:81338236-81338255 Msa0429830:intron 50.0%
GCAATGAGTTCAAGAGGCCA+AGG - chr3_2:81338256-81338275 None:intergenic 50.0%
GCAATCATCCTTTGCAGGGT+AGG + chr3_2:81338664-81338683 Msa0429830:intron 50.0%
GTGTGTGAGAATGAGGGAGA+GGG - chr3_2:81338902-81338921 None:intergenic 50.0%
TGTGTGTGAGAATGAGGGAG+AGG - chr3_2:81338903-81338922 None:intergenic 50.0%
CTCTCTCTCTCTCTCTCTCT+GGG - chr3_2:81339324-81339343 None:intergenic 50.0%
TCTCTCTCTCTCTCTCTCTC+TGG - chr3_2:81339325-81339344 None:intergenic 50.0%
!!! CCTCACAAGCCGCTTTTTTG+GGG - chr3_2:81339414-81339433 None:intergenic 50.0%
!!! CACCTCACAAGCCGCTTTTT+TGG - chr3_2:81339416-81339435 None:intergenic 50.0%
AAAAAGCGGCTTGTGAGGTG+AGG + chr3_2:81339416-81339435 Msa0429830:intron 50.0%
GTCCCACATTGGATGAGAGA+TGG - chr3_2:81339473-81339492 None:intergenic 50.0%
AACACCCCCTACATGATAGC+AGG + chr3_2:81339537-81339556 Msa0429830:intron 50.0%
ACACCCCCTACATGATAGCA+GGG + chr3_2:81339538-81339557 Msa0429830:intron 50.0%
TCCGTCCCTGCTATCATGTA+GGG - chr3_2:81339546-81339565 None:intergenic 50.0%
TTGTTGCTATATGCGGGCCT+TGG + chr3_2:81339571-81339590 Msa0429830:intron 50.0%
TATCAAGTAAGGACGGACCC+AGG - chr3_2:81340233-81340252 None:intergenic 50.0%
TGCAGGTATACCACAGTGCA+TGG + chr3_2:81340442-81340461 Msa0429830:intron 50.0%
ATAGTTCACGCCATGCACTG+TGG - chr3_2:81340455-81340474 None:intergenic 50.0%
AGTGGCCAAATCTCTGGATG+AGG + chr3_2:81340488-81340507 Msa0429830:CDS 50.0%
TGAGGTCATTGATGCCCATG+AGG + chr3_2:81340506-81340525 Msa0429830:CDS 50.0%
AATTCAGCGGCAGTGCTTTG+TGG + chr3_2:81340542-81340561 Msa0429830:CDS 50.0%
!! CGGAGCTGTTTCTGCAATCA+AGG + chr3_2:81340778-81340797 Msa0429830:CDS 50.0%
CTTCAAGCAGGGGCTTCTAT+TGG - chr3_2:81341009-81341028 None:intergenic 50.0%
TTAATGACCACATCTGGCCC+GGG + chr3_2:81341338-81341357 Msa0429830:CDS 50.0%
TCAAGATTGGGGAAAGCCTC+TGG + chr3_2:81341371-81341390 Msa0429830:CDS 50.0%
CAAGATTGGGGAAAGCCTCT+GGG + chr3_2:81341372-81341391 Msa0429830:CDS 50.0%
CAGAAGTGGCCTGCAATTAC+GGG - chr3_2:81341563-81341582 None:intergenic 50.0%
!!! TGCACCCATTTTTTGGGCGC+GGG - chr3_2:81332179-81332198 None:intergenic 55.0%
!!! CTGCACCCATTTTTTGGGCG+CGG - chr3_2:81332180-81332199 None:intergenic 55.0%
! TTGTGGTGATGCAGCGGTTG+AGG + chr3_2:81332656-81332675 Msa0429830:intron 55.0%
GTGTGTGCGGGATAGAGTGT+TGG + chr3_2:81332814-81332833 Msa0429830:intron 55.0%
TTGGGCGGTAAAGAACCAGC+AGG + chr3_2:81332833-81332852 Msa0429830:intron 55.0%
TGAACAGCCAAGTCTGCTGC+AGG - chr3_2:81333256-81333275 None:intergenic 55.0%
GTGTCTTGTACAAGGTGGCG+AGG + chr3_2:81333312-81333331 Msa0429830:CDS 55.0%
CTGGACAGTCTCTAACGCTC+TGG - chr3_2:81334241-81334260 None:intergenic 55.0%
CTGCTAAGGAACTTGGGGCA+TGG - chr3_2:81334334-81334353 None:intergenic 55.0%
TATAGGCACCTCTCCCAGAC+AGG - chr3_2:81336976-81336995 None:intergenic 55.0%
AGTGCGGAGATGGATGTGGA+AGG + chr3_2:81338506-81338525 Msa0429830:CDS 55.0%
GTAGATCCCCTACCCTGCAA+AGG - chr3_2:81338675-81338694 None:intergenic 55.0%
GAGAATGAGGGAGAGGGAGA+GGG - chr3_2:81338896-81338915 None:intergenic 55.0%
TGAGAATGAGGGAGAGGGAG+AGG - chr3_2:81338897-81338916 None:intergenic 55.0%
CCCCAAAAAAGCGGCTTGTG+AGG + chr3_2:81339411-81339430 Msa0429830:intron 55.0%
CGTCCCTGCTATCATGTAGG+GGG - chr3_2:81339544-81339563 None:intergenic 55.0%
CCGTCCCTGCTATCATGTAG+GGG - chr3_2:81339545-81339564 None:intergenic 55.0%
CCCCTACATGATAGCAGGGA+CGG + chr3_2:81339542-81339561 Msa0429830:intron 55.0%
GTCCGTCCCTGCTATCATGT+AGG - chr3_2:81339547-81339566 None:intergenic 55.0%
GCCTATGTGCCCGTAATTGC+AGG + chr3_2:81341551-81341570 Msa0429830:three_prime_UTR 55.0%
GCCTGCAATTACGGGCACAT+AGG - chr3_2:81341555-81341574 None:intergenic 55.0%
TTGCAGGCCACTTCTGTTGC+AGG + chr3_2:81341567-81341586 Msa0429830:three_prime_UTR 55.0%
CGTGCATCCTGCAACAGAAG+TGG - chr3_2:81341577-81341596 None:intergenic 55.0%
!! GTGCGGGATAGAGTGTTGGG+CGG + chr3_2:81332818-81332837 Msa0429830:intron 60.0%
GATGGGGAAGCTAGCACGTC+TGG + chr3_2:81338037-81338056 Msa0429830:CDS 60.0%
GAGAGGGAGAGGGAGAGAGA+GGG - chr3_2:81338886-81338905 None:intergenic 60.0%
! ATTTTTCCTGGCGCGGCAGC+TGG + chr3_2:81338964-81338983 Msa0429830:intron 60.0%
AACACTTCCCGGGCCAGATG+TGG - chr3_2:81341348-81341367 None:intergenic 60.0%
GGAGAGGGAGAGGGAGAGAG+AGG - chr3_2:81338887-81338906 None:intergenic 65.0%
CAACTTCCAGCTGCCGCGCC+AGG - chr3_2:81338973-81338992 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 81332111 81341897 81332111 ID=Msa0429830;Name=Msa0429830
chr3_2 mRNA 81332111 81341897 81332111 ID=Msa0429830-mRNA-1;Parent=Msa0429830;Name=Msa0429830-mRNA-1;_AED=0.10;_eAED=0.10;_QI=79|1|1|1|0.93|0.87|16|479|1000
chr3_2 exon 81332111 81332570 81332111 ID=Msa0429830-mRNA-1:exon:22442;Parent=Msa0429830-mRNA-1
chr3_2 exon 81332670 81332767 81332670 ID=Msa0429830-mRNA-1:exon:22443;Parent=Msa0429830-mRNA-1
chr3_2 exon 81333171 81333333 81333171 ID=Msa0429830-mRNA-1:exon:22444;Parent=Msa0429830-mRNA-1
chr3_2 exon 81333427 81333537 81333427 ID=Msa0429830-mRNA-1:exon:22445;Parent=Msa0429830-mRNA-1
chr3_2 exon 81334029 81335048 81334029 ID=Msa0429830-mRNA-1:exon:22446;Parent=Msa0429830-mRNA-1
chr3_2 exon 81335132 81335284 81335132 ID=Msa0429830-mRNA-1:exon:22447;Parent=Msa0429830-mRNA-1
chr3_2 exon 81335364 81335463 81335364 ID=Msa0429830-mRNA-1:exon:22448;Parent=Msa0429830-mRNA-1
chr3_2 exon 81336247 81336341 81336247 ID=Msa0429830-mRNA-1:exon:22449;Parent=Msa0429830-mRNA-1
chr3_2 exon 81337950 81338138 81337950 ID=Msa0429830-mRNA-1:exon:22450;Parent=Msa0429830-mRNA-1
chr3_2 exon 81338250 81338306 81338250 ID=Msa0429830-mRNA-1:exon:22451;Parent=Msa0429830-mRNA-1
chr3_2 exon 81338456 81338527 81338456 ID=Msa0429830-mRNA-1:exon:22452;Parent=Msa0429830-mRNA-1
chr3_2 exon 81338681 81338779 81338681 ID=Msa0429830-mRNA-1:exon:22453;Parent=Msa0429830-mRNA-1
chr3_2 exon 81340447 81340578 81340447 ID=Msa0429830-mRNA-1:exon:22454;Parent=Msa0429830-mRNA-1
chr3_2 exon 81340695 81340868 81340695 ID=Msa0429830-mRNA-1:exon:22455;Parent=Msa0429830-mRNA-1
chr3_2 exon 81341239 81341751 81341239 ID=Msa0429830-mRNA-1:exon:22456;Parent=Msa0429830-mRNA-1
chr3_2 exon 81341773 81341897 81341773 ID=Msa0429830-mRNA-1:exon:22457;Parent=Msa0429830-mRNA-1
chr3_2 five_prime_UTR 81332111 81332189 81332111 ID=Msa0429830-mRNA-1:five_prime_utr;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81332190 81332570 81332190 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81332670 81332767 81332670 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81333171 81333333 81333171 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81333427 81333537 81333427 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81334029 81335048 81334029 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81335132 81335284 81335132 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81335364 81335463 81335364 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81336247 81336341 81336247 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81337950 81338138 81337950 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81338250 81338306 81338250 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81338456 81338527 81338456 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81338681 81338779 81338681 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81340447 81340578 81340447 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81340695 81340868 81340695 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 CDS 81341239 81341397 81341239 ID=Msa0429830-mRNA-1:cds;Parent=Msa0429830-mRNA-1
chr3_2 three_prime_UTR 81341398 81341751 81341398 ID=Msa0429830-mRNA-1:three_prime_utr;Parent=Msa0429830-mRNA-1
chr3_2 three_prime_UTR 81341773 81341897 81341773 ID=Msa0429830-mRNA-1:three_prime_utr;Parent=Msa0429830-mRNA-1
Gene Sequence

>Msa0429830

ATGGGTGCAGAATCACACCATCCCCAAACCTTAATCCACAAAATCTACGCTCCATTCTCCAACGAATTCCCCTTCGCAACTCCTCTTCCTTCTCTCAAAACTAACGAACTTGAACTCGTTCGAGGCGTTTTACGAATGCTACAAGGGTTTTCCTCTTCCTTATTCTCATGGAATCACAACGAAAACCGTTTTCGTATCAATAACGGAGTTTACGTCACGCATTTATCCCTTAAAAGTCTTCATTCGCTTCTTAATCAATTTCTTCACGCTGCCACGTGTCTTCAAATCGTTGAGATTACTGTTAAGAAAGTTGAAACTACGGTGCCGAGACCTAATCCTACTTTGAATGCGTTTGTTGCTTCTGCTTCTTCGTGGCTTAAGCGGTTGAGGAATGTTGCGTTGAAGGAGGAAGTGTCTATGAATAATGCAGATGGTGTTTTCACTCCAACATTGTTAGGATTCAAAAATTCTTTATCAAGTCTTTGCTCTGGTGCTGAGTTCCTATTGCGAATAGTTCATGAGGCCATCCCTGATGTATATTTTGAGTTTGGGGCATCTGTACCTGCAGCAGACTTGGCTGTTCATGTTCTTGACTATCTTCATAAGAAGCTTGAAGAAATGTGTCTTGTACAAGGTGGCGAGGAGGAAGCTTATCTCATGGTACTTTACATGTATGTGGAAAGCTTGTTGCCATATATTGAGGGTCTTGATTCTTGGCTTTTTGACGGAATACTTGATGATCCTTCTGATGAGATGTTCTTTTTCGCTAATAAAGAAGTCTCAGTTACTGAGGCTGAGTTCTGGGAGAAGAGTTGTCTAATAAGAAAGCTACAGCATCGTAAGTTAGATACCGAGTTGTCGTCCACAATTTATGTCGGTGATTCCATGCCAGCATCAAATGAGAAGAAGGAAATGGGCATGAGGGATTCCATCTCTTTGTCTAGTACAATTAAAGGAAAAGACCAGAGCGTTAGAGACTGTCCAGCTTGTCCTTTGTTTATAAAGGATTTAGCTAAGTCAATTATTTCTGCTGGAAAATCTTTGCAGCTGATGCGCCATGCCCCAAGTTCCTTAGCAGCATGTAGCAGAGGAAGTAATGTTAAGTTTGGAAGTACCAAATCTTTAAACTATGGTCTGTCTCCTTCTCATAGAGTGGTTGGGCTAACACTGTCAGAAATTTTTTCTGTATCACTAGCTGGACTTATTGGTCATGGTGACCATGTTTGTAAATACTTCTGCCAAGATGATTGGCATGAATCTGTGTCTGTTTCTTCCTTTGTATCTTATTTAAATTTAAATGCGGAAAAAAAAGACAATCAAAACTTAACCGCTCCACCTTACTCAGAGAAGATTTGGTACAAGTTCTTGATTGATACATTATCTCAAAAAAAATCAGCTGACTTGAAGCCAAAATATGAAGACATTAATGGCAATGGTGATTCAAGAGGGGATAAAGTTGTTAAAGACGAATTGCTTCTCTTGAGATCATGCTTACAAAATCCCGTTATTACCGTTTGTCGAAAAACAATCGGAAACAACAGGGATTCCTTGAAAACATTGAATTTATCTCGAAAATTCTGCTTGCCTTCTTTAAATGACGAGGGTTTAAGAAAGGCTATATTTGGTGGAGAAAGTACATCATTTTCAGATAGTGAAGGAACAAACTATACTTTTGGTTTTCAGTATGATGAATCCAAATTCATTCACTCACAGGATAAGAGAAATCTGTTAGAAACACTGTTTCCTTTTCCCACCATTTTGCCTGCAGTTCAGGATGATCTTCCTGTATCAGAGTTCTTGCCTTTCCAGAGAAACAGCACTCTTCCTTCAGAAGTTCTTCACTGGATGCAAAATGTTGACCTAAGAACGACTCCACTACCTCTGGTTATTATGCAGTACTGTCTAACTGCCTACATTCAGAAACAGGTAGATTATATTGGAGTGAATATGTTGTTAAAGTTGATGAATGAATGGAGGTTGATGGACGAGCTTGCAGTGCTGCGAGCAATATACTTGTTAGGTTCAGGCGATTTGCTACAACACTTTTCAACCGTCATTTTCGATAAGTTGGATAAGGGTGAAACATGGGATGATGATTTTGAATTAAACACAATATTACAGGAATCAATCAGGAATTCTGCTGATTGTATGCTGTTAAGTGCTCCAGATTCTTTGGTAGTTTCAATAACCAAAAATATTGTTGAGAGTGATGGGGAAGCTAGCACGTCTGGTTCTGTTTTGGGTACTCATAAAAGTCGTGTCAATAACTTGGGGATGAACGGTCTTGATATGCTAAAATTCACATATAAGGTACCTTGGCCTCTTGAACTCATTGCAAACACAGAGGCAATTAAGAAGTACAACCAGGTGATGCGGTTTTTGTTGAAGGTCAAGCGTGCAAAATTTGTATTAGATAAAGTGCGGAGATGGATGTGGAAGGGTAGGGGATCTACAACAAATAACAGAAAACATCATTGGTTAGTGGAGCAGAAACTCCTTCATTTTGTGGATGCTTTTCACCAATATGTGATGGACCGGGTATACCACAGTGCATGGCGTGAACTATGTGAAAGTATGACAGTGGCCAAATCTCTGGATGAGGTCATTGATGCCCATGAGGCTTACATGTTGTCAATTCAGCGGCAGTGCTTTGTGGTTCCTGATAAACTGGGGGCTTTGATTGCCAGCCGCGTTAATATCATCCTTGGTTTAGCTTTAGACTTCTATACCATACAACAAACATTAAAAAGCGGCGGAGCTGTTTCTGCAATCAAGGCAAGGTGTGAGATGGAAGTCGACCGAATTGAGAAACAGTTTGATGATTGCATTGCTTTCTTACTTAGGGTCTTATCTTTCAAACTAAATGTAGGGCATTTCCCTCATTTGGCTGATTTGGTCACCAGAATTAACTACAACTATTTTTACATGTCTGCTAATGGGAATTTAATGACCACATCTGGCCCGGGAAGTGTTGCTTCAAGATTGGGGAAAGCCTCTGGGTAA
Protein sequence

>Msa0429830

MGAESHHPQTLIHKIYAPFSNEFPFATPLPSLKTNELELVRGVLRMLQGFSSSLFSWNHNENRFRINNGVYVTHLSLKSLHSLLNQFLHAATCLQIVEITVKKVETTVPRPNPTLNAFVASASSWLKRLRNVALKEEVSMNNADGVFTPTLLGFKNSLSSLCSGAEFLLRIVHEAIPDVYFEFGASVPAADLAVHVLDYLHKKLEEMCLVQGGEEEAYLMVLYMYVESLLPYIEGLDSWLFDGILDDPSDEMFFFANKEVSVTEAEFWEKSCLIRKLQHRKLDTELSSTIYVGDSMPASNEKKEMGMRDSISLSSTIKGKDQSVRDCPACPLFIKDLAKSIISAGKSLQLMRHAPSSLAACSRGSNVKFGSTKSLNYGLSPSHRVVGLTLSEIFSVSLAGLIGHGDHVCKYFCQDDWHESVSVSSFVSYLNLNAEKKDNQNLTAPPYSEKIWYKFLIDTLSQKKSADLKPKYEDINGNGDSRGDKVVKDELLLLRSCLQNPVITVCRKTIGNNRDSLKTLNLSRKFCLPSLNDEGLRKAIFGGESTSFSDSEGTNYTFGFQYDESKFIHSQDKRNLLETLFPFPTILPAVQDDLPVSEFLPFQRNSTLPSEVLHWMQNVDLRTTPLPLVIMQYCLTAYIQKQVDYIGVNMLLKLMNEWRLMDELAVLRAIYLLGSGDLLQHFSTVIFDKLDKGETWDDDFELNTILQESIRNSADCMLLSAPDSLVVSITKNIVESDGEASTSGSVLGTHKSRVNNLGMNGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFVLDKVRRWMWKGRGSTTNNRKHHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCESMTVAKSLDEVIDAHEAYMLSIQRQCFVVPDKLGALIASRVNIILGLALDFYTIQQTLKSGGAVSAIKARCEMEVDRIEKQFDDCIAFLLRVLSFKLNVGHFPHLADLVTRINYNYFYMSANGNLMTTSGPGSVASRLGKASG*