AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0434420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0434420 MtrunA17_Chr3g0140741 98.448 451 7 0 1 451 1 451 0.0 883
Msa0434420 MtrunA17_Chr3g0140741 25.926 378 184 9 32 363 312 639 1.08e-24 107
Msa0434420 MtrunA17_Chr6g0453421 36.175 434 211 9 32 451 47 428 9.76e-66 221
Msa0434420 MtrunA17_Chr6g0453421 33.117 154 91 2 310 451 45 198 1.48e-23 103
Msa0434420 MtrunA17_Chr6g0453421 31.624 234 112 3 7 240 264 449 4.23e-15 77.8
Msa0434420 MtrunA17_Chr7g0217681 34.505 455 235 11 15 451 27 436 1.58e-59 205
Msa0434420 MtrunA17_Chr7g0217681 39.252 107 54 1 165 260 382 488 1.68e-14 75.9
Msa0434420 MtrunA17_Chr2g0279641 29.644 506 247 14 5 451 22 477 6.66e-53 190
Msa0434420 MtrunA17_Chr2g0279641 30.841 214 97 4 32 240 331 498 1.05e-21 98.6
Msa0434420 MtrunA17_Chr2g0279641 28.372 215 112 6 264 452 8 206 1.60e-16 82.4
Msa0434420 MtrunA17_Chr4g0049801 30.493 446 231 11 32 451 20 412 8.14e-51 182
Msa0434420 MtrunA17_Chr4g0049801 29.097 299 132 8 10 289 237 474 6.36e-22 99.0
Msa0434420 MtrunA17_Chr4g0049801 34.868 152 83 6 312 452 20 166 7.41e-16 80.1
Msa0434420 MtrunA17_Chr3g0127051 28.416 461 245 10 24 451 57 465 1.51e-50 182
Msa0434420 MtrunA17_Chr4g0002241 35.463 313 176 7 143 451 74 364 1.22e-46 171
Msa0434420 MtrunA17_Chr2g0285771 29.571 443 252 12 32 451 42 447 2.86e-42 159
Msa0434420 MtrunA17_Chr5g0412061 29.540 457 246 14 12 451 23 420 7.37e-39 149
Msa0434420 MtrunA17_Chr5g0412061 30.978 184 94 7 304 461 27 203 2.73e-16 81.6
Msa0434420 MtrunA17_Chr5g0412061 30.242 248 106 7 31 269 274 463 1.99e-15 79.0
Msa0434420 MtrunA17_Chr8g0376551 32.166 314 168 9 168 451 151 449 8.02e-35 137
Msa0434420 MtrunA17_Chr8g0376551 25.341 367 195 9 20 363 305 615 1.14e-19 92.0
Msa0434420 MtrunA17_Chr1g0184511 29.054 148 99 1 314 455 167 314 7.95e-19 89.4
Msa0434420 MtrunA17_Chr7g0249721 31.163 215 104 4 32 243 100 273 6.25e-18 84.7
Msa0434420 MtrunA17_Chr7g0249721 31.126 151 92 3 312 451 100 249 5.41e-13 69.7
Msa0434420 MtrunA17_Chr2g0298721 32.026 153 97 1 314 459 72 224 2.39e-15 78.2
Msa0434420 MtrunA17_Chr4g0071791 33.562 146 90 1 314 452 46 191 3.60e-15 77.4
Msa0434420 MtrunA17_Chr7g0250921 54.545 66 27 1 395 457 28 93 1.35e-13 69.3
Msa0434420 MtrunA17_Chr7g0274301 27.273 143 96 3 314 451 117 256 2.97e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0434420 AT5G15270.2 35.880 432 208 9 32 451 50 424 7.08e-73 240
Msa0434420 AT5G15270.2 30.660 212 100 4 29 240 281 445 4.50e-19 90.5
Msa0434420 AT5G15270.1 35.880 432 208 9 32 451 50 424 7.08e-73 240
Msa0434420 AT5G15270.1 30.660 212 100 4 29 240 281 445 4.50e-19 90.5
Msa0434420 AT5G15270.3 35.880 432 208 9 32 451 50 424 9.00e-73 239
Msa0434420 AT5G15270.3 30.660 212 100 4 29 240 281 445 6.17e-19 90.1
Msa0434420 AT1G51580.1 33.406 461 248 13 28 467 15 437 2.43e-61 211
Msa0434420 AT1G51580.1 29.680 219 105 5 21 239 265 434 7.21e-18 87.0
Msa0434420 AT5G46190.1 30.942 446 246 14 32 451 44 453 3.95e-52 187
Msa0434420 AT5G46190.1 23.514 370 194 9 29 365 314 627 2.94e-15 79.0
Msa0434420 AT5G46190.4 30.942 446 246 14 32 451 44 453 3.95e-52 187
Msa0434420 AT5G46190.4 23.514 370 194 9 29 365 314 627 2.94e-15 79.0
Msa0434420 AT5G46190.3 30.942 446 246 14 32 451 44 453 3.95e-52 187
Msa0434420 AT5G46190.3 23.514 370 194 9 29 365 314 627 2.94e-15 79.0
Msa0434420 AT5G46190.2 30.942 446 246 14 32 451 44 453 8.63e-52 186
Msa0434420 AT5G46190.2 29.224 219 104 4 29 247 314 481 5.03e-15 78.2
Msa0434420 AT5G53060.3 31.072 457 220 17 30 451 66 462 8.53e-50 179
Msa0434420 AT1G14170.1 32.093 430 231 10 29 455 16 387 2.39e-49 175
Msa0434420 AT1G14170.1 35.938 128 80 2 114 241 280 405 3.50e-15 78.2
Msa0434420 AT5G53060.1 30.853 457 221 17 30 451 66 462 2.89e-49 179
Msa0434420 AT1G14170.2 32.084 427 229 10 32 455 11 379 5.28e-49 174
Msa0434420 AT1G14170.2 35.938 128 80 2 114 241 272 397 3.24e-15 78.2
Msa0434420 AT4G18375.3 30.719 459 237 17 8 430 15 428 1.48e-41 155
Msa0434420 AT4G18375.2 30.719 459 237 17 8 430 15 428 6.02e-41 155
Msa0434420 AT4G18375.2 25.676 370 149 13 29 363 309 587 3.02e-14 75.5
Msa0434420 AT1G14170.3 34.228 298 166 7 161 455 142 412 1.67e-35 138
Msa0434420 AT1G14170.3 30.872 149 85 4 310 441 42 189 2.29e-15 79.0
Msa0434420 AT1G14170.3 35.938 128 80 2 114 241 305 430 4.56e-15 77.8
Msa0434420 AT1G14170.3 52.542 59 28 0 29 87 41 99 1.10e-12 70.5
Msa0434420 AT2G22600.1 29.539 369 196 12 34 384 27 349 1.13e-31 129
Msa0434420 AT5G64390.2 36.416 173 97 4 305 464 438 610 5.01e-28 118
Msa0434420 AT5G64390.2 29.412 221 99 4 32 241 452 626 1.48e-21 98.6
Msa0434420 AT5G64390.2 32.367 207 107 5 32 237 47 221 1.38e-20 95.9
Msa0434420 AT5G64390.2 29.609 179 101 3 295 452 30 204 1.53e-15 80.1
Msa0434420 AT5G64390.1 36.416 173 97 4 305 464 438 610 5.12e-28 118
Msa0434420 AT5G64390.1 29.412 221 99 4 32 241 452 626 1.50e-21 99.0
Msa0434420 AT5G64390.1 32.367 207 107 5 32 237 47 221 1.42e-20 95.9
Msa0434420 AT5G64390.1 29.609 179 101 3 295 452 30 204 1.56e-15 80.1
Msa0434420 AT5G64390.3 36.416 173 97 4 305 464 438 610 5.25e-28 118
Msa0434420 AT5G64390.3 29.412 221 99 4 32 241 452 626 1.56e-21 98.6
Msa0434420 AT5G64390.3 32.367 207 107 5 32 237 47 221 1.49e-20 95.9
Msa0434420 AT5G64390.3 29.609 179 101 3 295 452 30 204 1.68e-15 80.1
Msa0434420 AT4G18375.1 36.364 154 86 5 279 430 72 215 8.35e-18 85.5
Msa0434420 AT4G18375.1 25.676 370 149 13 29 363 96 374 3.50e-14 74.7
Msa0434420 AT4G26000.1 31.293 147 92 2 314 452 76 221 1.02e-16 83.2
Msa0434420 AT3G04610.2 30.137 146 91 2 314 451 189 331 7.09e-16 80.9
Msa0434420 AT3G04610.1 30.137 146 91 2 314 451 189 331 7.09e-16 80.9
Msa0434420 AT3G04610.3 30.137 146 91 2 314 451 165 307 8.99e-16 80.5
Msa0434420 AT3G04610.4 30.137 146 91 2 314 451 165 307 8.99e-16 80.5
Msa0434420 AT5G09560.1 21.711 456 284 13 32 451 30 448 3.73e-15 78.6
Msa0434420 AT5G53060.2 33.846 130 60 4 309 412 62 191 2.19e-11 63.5

Find 154 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGGGTTACTTTGGTTTA+AGG 0.150077 3_2:-87177674 Msa0434420:CDS
CTATGCCCTGCTAGTAAAAT+TGG 0.161022 3_2:-87178047 Msa0434420:CDS
GATGGCACCTTCATGAAATT+TGG 0.168642 3_2:+87176976 None:intergenic
CCTTTCCCAGCATACGAATA+TGG 0.188365 3_2:+87176486 None:intergenic
CAAGGTCATTGAAGCCATTC+AGG 0.208070 3_2:-87176822 Msa0434420:CDS
CTATTTGATTCTGATTTCTT+TGG 0.215932 3_2:+87178143 None:intergenic
TAATCAAGTTGGATGCATTC+TGG 0.232113 3_2:-87177637 Msa0434420:CDS
AAACGGAAAGTAAGTATTTC+CGG 0.277696 3_2:+87176932 None:intergenic
GAAAGTGTAGGAAATTTAAT+TGG 0.287753 3_2:-87176896 Msa0434420:CDS
AAGTTTGGGCTGAATGAGTT+TGG 0.291428 3_2:-87178456 None:intergenic
AGGTGGTGATGAAAGTAAAA+AGG 0.306740 3_2:-87177691 Msa0434420:CDS
TCTCTGCCTACCAATCTTAC+TGG 0.317118 3_2:-87177118 Msa0434420:CDS
TAACTTTCACGCCGGTTTCA+TGG 0.330544 3_2:+87177982 None:intergenic
AGAAGATGATGAAGTAATTC+AGG 0.340137 3_2:-87176441 Msa0434420:CDS
CAAAGAAATCAGAATCAAAT+AGG 0.345404 3_2:-87178142 Msa0434420:CDS
AAAATTGAAGAGCCTGTTCC+GGG 0.359871 3_2:-87177960 Msa0434420:CDS
AATTAAATTTCCTACACTTT+CGG 0.361795 3_2:+87176898 None:intergenic
GACTGCATTATCATCATATC+TGG 0.364445 3_2:-87176791 Msa0434420:CDS
ATGGCACCTTCATGAAATTT+GGG 0.374215 3_2:+87176977 None:intergenic
TCATGAAATTTGGGAATCAT+AGG 0.376817 3_2:+87176986 None:intergenic
AAACATATAGGTTGTCTCCT+AGG 0.382974 3_2:-87176554 Msa0434420:CDS
TAAAATTGAAGAGCCTGTTC+CGG 0.389625 3_2:-87177961 Msa0434420:CDS
ACAGGAGATATTCTATCATC+TGG 0.393064 3_2:+87176671 None:intergenic
AATCAAGTTGGATGCATTCT+GGG 0.398648 3_2:-87177636 Msa0434420:CDS
CACGCGGGAATTTCTTCTTT+AGG 0.402521 3_2:+87177552 None:intergenic
TAGGAGACAACCTATATGTT+TGG 0.404189 3_2:+87176556 None:intergenic
TATGCCCTGCTAGTAAAATT+GGG 0.405082 3_2:-87178046 Msa0434420:CDS
ATTCCTCATTTCAGCTATGA+TGG 0.410163 3_2:+87176520 None:intergenic
TCACAAATTCGCCATGAAAC+CGG 0.411284 3_2:-87177993 Msa0434420:CDS
TCGTATGCTGGGAAAGGATA+AGG 0.411874 3_2:-87176480 Msa0434420:CDS
TTCAATGACCTTGATTTCAC+TGG 0.418422 3_2:+87176832 None:intergenic
CTTTCTTCACAGCCCGGAAC+AGG 0.420839 3_2:+87177948 None:intergenic
GGGCTGAATGAGTTTGGGTT+GGG 0.424011 3_2:-87178450 Msa0434420:five_prime_UTR
GTGACTTAAGCAGACCTCTT+GGG 0.426702 3_2:+87178410 None:intergenic
TGATTATTGATATATGCAAT+AGG 0.426955 3_2:-87178202 Msa0434420:five_prime_UTR
CTTATCCTTTCTAATCAAGT+TGG 0.428019 3_2:-87177648 Msa0434420:CDS
ATTGTTTCTTCCAAACATAT+AGG 0.430402 3_2:-87176566 Msa0434420:CDS
GCTGAAATGAGGAATTTATC+AGG 0.435253 3_2:-87176512 Msa0434420:CDS
AGTTTGGGCTGAATGAGTTT+GGG 0.439189 3_2:-87178455 None:intergenic
TGGAAAACAGGAATTTCATT+AGG 0.441814 3_2:+87177016 None:intergenic
AATATACACAATATCAGATA+TGG 0.443781 3_2:+87176407 None:intergenic
ATAGGAGCAGAATGGAAAAC+AGG 0.451070 3_2:+87177004 None:intergenic
CTTTCCCAGCATACGAATAT+GGG 0.454918 3_2:+87176487 None:intergenic
TCATCTTCTGAAACACACTT+TGG 0.457150 3_2:+87176455 None:intergenic
GAGAGGGTGGCTGAGGATGA+AGG 0.460793 3_2:-87177711 Msa0434420:CDS
TTTCATGAAGGTGCCATCCT+TGG 0.463064 3_2:-87176971 Msa0434420:CDS
CCGGCGAAAGTGCGTTTAGT+TGG 0.463880 3_2:+87177064 None:intergenic
CTGTTCCGGGCTGTGAAGAA+AGG 0.465159 3_2:-87177947 Msa0434420:CDS
CAGGAGGAGTAGAAGTTGTC+AGG 0.466884 3_2:-87177198 Msa0434420:CDS
AGATGACGGCCCAGTAAGAT+TGG 0.470267 3_2:+87177108 None:intergenic
CTCTGCCTACCAATCTTACT+GGG 0.470652 3_2:-87177117 Msa0434420:CDS
CGTATGCTGGGAAAGGATAA+GGG 0.470770 3_2:-87176479 Msa0434420:CDS
TGTAGGAAATTTAATTGGCA+AGG 0.474265 3_2:-87176891 Msa0434420:CDS
TGGGCTGAATGAGTTTGGGT+TGG 0.476038 3_2:-87178451 Msa0434420:five_prime_UTR
AGGTGCCCATATTCGTATGC+TGG 0.481052 3_2:-87176492 Msa0434420:CDS
TGTGACTTAAGCAGACCTCT+TGG 0.481223 3_2:+87178409 None:intergenic
GGGCCGTCATCTCATTCATA+TGG 0.482569 3_2:-87177097 Msa0434420:CDS
TACTAGCAGGGCATAGCAAA+CGG 0.484008 3_2:+87178054 None:intergenic
TGCATCCAACTTGATTAGAA+AGG 0.484826 3_2:+87177643 None:intergenic
AGATTCTGACGAGTTAGTTC+AGG 0.488806 3_2:-87177523 Msa0434420:intron
CTCACTTTGCGAATCTTCAA+CGG 0.491110 3_2:+87177782 None:intergenic
TTTCGGAAGGACACAGTAAA+CGG 0.494174 3_2:+87176915 None:intergenic
GCAGTCCTCTGAACCCTGAA+TGG 0.498045 3_2:+87176808 None:intergenic
AGAGACAGCCAGTGAAATCA+AGG 0.498565 3_2:-87176840 Msa0434420:CDS
AAGAGCACAGTATGTTAGCA+AGG 0.500383 3_2:-87176592 Msa0434420:CDS
GATGATGAGGGGAAAGAGAA+TGG 0.501165 3_2:-87177834 Msa0434420:CDS
AGCAAGGGGAAGGATGATGA+GGG 0.503829 3_2:-87177846 Msa0434420:CDS
TAGTGTTGAGCAAGGAAAGG+AGG 0.507210 3_2:-87177892 Msa0434420:CDS
AGCAAAAGATGCTCCTTGAC+CGG 0.507586 3_2:+87177045 None:intergenic
AGGCCTCATGCGACCAAGGA+TGG 0.510808 3_2:+87176958 None:intergenic
ATTCGAATCCGACTATTATG+AGG 0.510933 3_2:-87177752 Msa0434420:CDS
GTGTGCAAAATAGAATATCC+AGG 0.512605 3_2:-87176631 Msa0434420:CDS
GCGAAAGTGCGTTTAGTTGG+TGG 0.513619 3_2:+87177067 None:intergenic
AGTTGGATGCATTCTGGGAA+AGG 0.514303 3_2:-87177631 Msa0434420:CDS
AAGGTCATTGAAGCCATTCA+GGG 0.516236 3_2:-87176821 Msa0434420:CDS
CTGAATGAGTTTGGGTTGGG+CGG 0.517462 3_2:-87178447 Msa0434420:five_prime_UTR
CATGATATGGTGTAGATCAC+AGG 0.517720 3_2:-87177217 Msa0434420:intron
AACATATAGGTTGTCTCCTA+GGG 0.520366 3_2:-87176553 Msa0434420:CDS
TGGTCGCATGAGGCCTCCAC+CGG 0.529951 3_2:-87176951 Msa0434420:CDS
AAGCAAGGGGAAGGATGATG+AGG 0.530565 3_2:-87177847 Msa0434420:CDS
TAATGATGAGAGTGAAAGCA+AGG 0.533583 3_2:-87177862 Msa0434420:CDS
TGAGAGTGAAAGCAAGGGGA+AGG 0.538856 3_2:-87177856 Msa0434420:CDS
TTTACTATCAAGTATAGCCC+TGG 0.545716 3_2:+87176613 None:intergenic
ATGATTCCCAAATTTCATGA+AGG 0.547304 3_2:-87176983 Msa0434420:CDS
CGGCACCGGCGTCGACGGTG+AGG 0.550754 3_2:+87178331 None:intergenic
CGAAAGTGCGTTTAGTTGGT+GGG 0.551204 3_2:+87177068 None:intergenic
TAGAATATCTCCTGTGCAAG+AGG 0.552404 3_2:-87176663 Msa0434420:CDS
AAACGCACTTTCGCCGGTCA+AGG 0.552785 3_2:-87177058 Msa0434420:CDS
TGTTCCGGGCTGTGAAGAAA+GGG 0.552834 3_2:-87177946 Msa0434420:CDS
GGAAATTTAATTGGCAAGGG+TGG 0.554438 3_2:-87176887 Msa0434420:CDS
TGATGGAACCACCCTTCCCT+AGG 0.556061 3_2:+87176537 None:intergenic
TGACTTAAGCAGACCTCTTG+GGG 0.556925 3_2:+87178411 None:intergenic
GTAGGAAATTTAATTGGCAA+GGG 0.557001 3_2:-87176890 Msa0434420:CDS
AGGTAGTGTTGAGCAAGGAA+AGG 0.557818 3_2:-87177895 Msa0434420:CDS
AAGAGAATGTCAGCTGAAAG+TGG 0.559093 3_2:-87177594 Msa0434420:CDS
GTGCCATCCTTGGTCGCATG+AGG 0.559386 3_2:-87176961 Msa0434420:CDS
GTTGGATGCATTCTGGGAAA+GGG 0.559490 3_2:-87177630 Msa0434420:CDS
GGTGCCCATATTCGTATGCT+GGG 0.560912 3_2:-87176491 Msa0434420:CDS
AAAATCGGCACCGGCGTCGA+CGG 0.563573 3_2:+87178326 None:intergenic
TCTGCCCTCACCGTCGACGC+CGG 0.563768 3_2:-87178336 Msa0434420:five_prime_UTR
CTGTGTCCTTCCGAAAGTGT+AGG 0.564267 3_2:-87176908 Msa0434420:CDS
TTAAGTCACACTGGCGAGCG+AGG 0.565497 3_2:-87178396 Msa0434420:five_prime_UTR
GAAGAAGGTAGTGTTGAGCA+AGG 0.565560 3_2:-87177900 Msa0434420:CDS
ATCTACAACTTTATCCCATG+TGG 0.565637 3_2:-87176380 Msa0434420:CDS
CGAAATATAGCCTCTTGCAC+AGG 0.567572 3_2:+87176653 None:intergenic
TAGTCATTGTATTGAAACAA+TGG 0.569530 3_2:+87178171 None:intergenic
TGAAGCCATTCAGGGTTCAG+AGG 0.570417 3_2:-87176813 Msa0434420:CDS
GCTTGTGGAGAATTCACCTC+GGG 0.573852 3_2:-87177149 Msa0434420:CDS
AAAGTAAGTATTTCCGGTGG+AGG 0.575977 3_2:+87176938 None:intergenic
CCATATTCGTATGCTGGGAA+AGG 0.576198 3_2:-87176486 Msa0434420:CDS
AGAGAATGTCAGCTGAAAGT+GGG 0.578735 3_2:-87177593 Msa0434420:CDS
GGCACCGGCGTCGACGGTGA+GGG 0.579855 3_2:+87178332 None:intergenic
GTGGAGGCCTCATGCGACCA+AGG 0.581490 3_2:+87176954 None:intergenic
CTATGAAAATTATACCCACA+TGG 0.582969 3_2:+87176365 None:intergenic
CCAACTAAACGCACTTTCGC+CGG 0.583530 3_2:-87177064 Msa0434420:CDS
CAGGAGATATTCTATCATCT+GGG 0.585194 3_2:+87176672 None:intergenic
ATGATGAGAGTGAAAGCAAG+GGG 0.588840 3_2:-87177860 Msa0434420:CDS
TATAGGTTGTCTCCTAGGGA+AGG 0.589344 3_2:-87176549 Msa0434420:CDS
AAATTTCCTACACTTTCGGA+AGG 0.591613 3_2:+87176902 None:intergenic
GTCAGAATCTGACGCACACG+CGG 0.595912 3_2:+87177536 None:intergenic
TGGGAATCATAGGAGCAGAA+TGG 0.596971 3_2:+87176996 None:intergenic
TAAGTCACACTGGCGAGCGA+GGG 0.598246 3_2:-87178395 Msa0434420:five_prime_UTR
ATAACCCTTTCTTCACAGCC+CGG 0.599151 3_2:+87177942 None:intergenic
TGACCATATGAATGAGATGA+CGG 0.599403 3_2:+87177094 None:intergenic
GGTTGTCTCCTAGGGAAGGG+TGG 0.600069 3_2:-87176545 Msa0434420:CDS
AATGATGAGAGTGAAAGCAA+GGG 0.602193 3_2:-87177861 Msa0434420:CDS
ATGCCCTGCTAGTAAAATTG+GGG 0.606924 3_2:-87178045 Msa0434420:CDS
TGAAGATTCGCAAAGTGAGA+AGG 0.607206 3_2:-87177778 Msa0434420:CDS
TTCGAATCCGACTATTATGA+GGG 0.611049 3_2:-87177751 Msa0434420:CDS
GTTCCATCATAGCTGAAATG+AGG 0.614983 3_2:-87176523 Msa0434420:CDS
ATTACAGCCCTCATAATAGT+CGG 0.622039 3_2:+87177744 None:intergenic
GACGGCCCAGTAAGATTGGT+AGG 0.623157 3_2:+87177112 None:intergenic
TATGAAAATTATACCCACAT+GGG 0.623242 3_2:+87176366 None:intergenic
TCTACAACTTTATCCCATGT+GGG 0.626106 3_2:-87176379 Msa0434420:CDS
ATAGGTTGTCTCCTAGGGAA+GGG 0.627255 3_2:-87176548 Msa0434420:CDS
TGTGCAAAATAGAATATCCA+GGG 0.628268 3_2:-87176630 Msa0434420:CDS
GAGGTCTGCTTAAGTCACAC+TGG 0.636295 3_2:-87178405 Msa0434420:five_prime_UTR
GGATGCATTCTGGGAAAGGG+TGG 0.636839 3_2:-87177627 Msa0434420:CDS
TGCCCTGCTAGTAAAATTGG+GGG 0.640430 3_2:-87178044 Msa0434420:CDS
GCAAGGGGAAGGATGATGAG+GGG 0.651917 3_2:-87177845 Msa0434420:CDS
TATCATCATATCTGGTCCAG+CGG 0.653910 3_2:-87176783 Msa0434420:intron
GGCAGAGACTCATGATCCCG+AGG 0.654906 3_2:+87177133 None:intergenic
AGCTTGTGGAGAATTCACCT+CGG 0.661801 3_2:-87177150 Msa0434420:CDS
CGGAAAGTAAGTATTTCCGG+TGG 0.663682 3_2:+87176935 None:intergenic
GAGAATGTCAGCTGAAAGTG+GGG 0.664563 3_2:-87177592 Msa0434420:CDS
AGAGCACAGTATGTTAGCAA+GGG 0.664846 3_2:-87176591 Msa0434420:CDS
AGGGTGGCTGAGGATGAAGG+TGG 0.667871 3_2:-87177708 Msa0434420:CDS
AATGATTCGAACCTACAAGA+CGG 0.669310 3_2:+87178300 None:intergenic
GAGGGCAGAGAACGACGGAG+CGG 0.675226 3_2:+87178350 None:intergenic
GATATGGTGTAGATCACAGG+AGG 0.678298 3_2:-87177214 Msa0434420:intron
ACGGTGAGGGCAGAGAACGA+CGG 0.694062 3_2:+87178345 None:intergenic
GACTTAAGCAGACCTCTTGG+GGG 0.698576 3_2:+87178412 None:intergenic
TCAGAATCTGACGCACACGC+GGG 0.706606 3_2:+87177537 None:intergenic
ACGCTAGAAGATACATCCAA+CGG 0.717315 3_2:+87178083 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATTATTGATATATGCAAT+AGG - chr3_2:87176593-87176612 Msa0434420:CDS 20.0%
!!! TGATGTATTTCACTTATTTT+TGG - chr3_2:87177513-87177532 Msa0434420:intron 20.0%
!! AATTAAATTTCCTACACTTT+CGG + chr3_2:87177900-87177919 None:intergenic 20.0%
!! AATATACACAATATCAGATA+TGG + chr3_2:87178391-87178410 None:intergenic 20.0%
!! TGATTATTGATATATGCAAT+AGG - chr3_2:87176593-87176612 Msa0434420:CDS 20.0%
!!! TGATGTATTTCACTTATTTT+TGG - chr3_2:87177513-87177532 Msa0434420:intron 20.0%
!! AATTAAATTTCCTACACTTT+CGG + chr3_2:87177900-87177919 None:intergenic 20.0%
!! AATATACACAATATCAGATA+TGG + chr3_2:87178391-87178410 None:intergenic 20.0%
! TAGTCATTGTATTGAAACAA+TGG + chr3_2:87176627-87176646 None:intergenic 25.0%
! CTATTTGATTCTGATTTCTT+TGG + chr3_2:87176655-87176674 None:intergenic 25.0%
! CAAAGAAATCAGAATCAAAT+AGG - chr3_2:87176653-87176672 Msa0434420:CDS 25.0%
!!! TTTTTAAAAGAGAGTGAAGA+AGG - chr3_2:87176880-87176899 Msa0434420:CDS 25.0%
!!! TGTAATGTTAGTTTTTGAGA+GGG - chr3_2:87177068-87177087 Msa0434420:CDS 25.0%
!!! ATTTCACTTATTTTTGGACA+TGG - chr3_2:87177519-87177538 Msa0434420:intron 25.0%
! CATTTCTCATAATCATGATA+TGG - chr3_2:87177565-87177584 Msa0434420:CDS 25.0%
!! GAAAGTGTAGGAAATTTAAT+TGG - chr3_2:87177899-87177918 Msa0434420:CDS 25.0%
! AATAGCACAAATGAGAAAAT+GGG + chr3_2:87178052-87178071 None:intergenic 25.0%
!! ATTGTTTCTTCCAAACATAT+AGG - chr3_2:87178229-87178248 Msa0434420:intron 25.0%
! TATGAAAATTATACCCACAT+GGG + chr3_2:87178432-87178451 None:intergenic 25.0%
! AGTAATGCTGATATATTGTA+AGG - chr3_2:87178451-87178470 Msa0434420:five_prime_UTR 25.0%
! TAGTCATTGTATTGAAACAA+TGG + chr3_2:87176627-87176646 None:intergenic 25.0%
! CTATTTGATTCTGATTTCTT+TGG + chr3_2:87176655-87176674 None:intergenic 25.0%
! CAAAGAAATCAGAATCAAAT+AGG - chr3_2:87176653-87176672 Msa0434420:CDS 25.0%
!!! TTTTTAAAAGAGAGTGAAGA+AGG - chr3_2:87176880-87176899 Msa0434420:CDS 25.0%
!!! TGTAATGTTAGTTTTTGAGA+GGG - chr3_2:87177068-87177087 Msa0434420:CDS 25.0%
!!! ATTTCACTTATTTTTGGACA+TGG - chr3_2:87177519-87177538 Msa0434420:intron 25.0%
! CATTTCTCATAATCATGATA+TGG - chr3_2:87177565-87177584 Msa0434420:CDS 25.0%
!! GAAAGTGTAGGAAATTTAAT+TGG - chr3_2:87177899-87177918 Msa0434420:CDS 25.0%
! AATAGCACAAATGAGAAAAT+GGG + chr3_2:87178052-87178071 None:intergenic 25.0%
!! ATTGTTTCTTCCAAACATAT+AGG - chr3_2:87178229-87178248 Msa0434420:intron 25.0%
! TATGAAAATTATACCCACAT+GGG + chr3_2:87178432-87178451 None:intergenic 25.0%
!!! TTCAATTTTAACTTTCACGC+CGG + chr3_2:87176824-87176843 None:intergenic 30.0%
!!! CTGTAATGTTAGTTTTTGAG+AGG - chr3_2:87177067-87177086 Msa0434420:CDS 30.0%
GAAAGTAAAAAGGGTTACTT+TGG - chr3_2:87177114-87177133 Msa0434420:CDS 30.0%
! AAAAGGGTTACTTTGGTTTA+AGG - chr3_2:87177121-87177140 Msa0434420:CDS 30.0%
CTTATCCTTTCTAATCAAGT+TGG - chr3_2:87177147-87177166 Msa0434420:CDS 30.0%
TATGCCTATATGCACTAAAA+TGG - chr3_2:87177314-87177333 Msa0434420:intron 30.0%
!!! TATGCCATTTTAGTGCATAT+AGG + chr3_2:87177321-87177340 None:intergenic 30.0%
TATATGCACTAAAATGGCAT+AGG - chr3_2:87177320-87177339 Msa0434420:intron 30.0%
ATATGCACTAAAATGGCATA+GGG - chr3_2:87177321-87177340 Msa0434420:intron 30.0%
TTCCATGAAATTTCTGTTGT+TGG - chr3_2:87177353-87177372 Msa0434420:intron 30.0%
AACCAACAACAGAAATTTCA+TGG + chr3_2:87177358-87177377 None:intergenic 30.0%
ATACATCAAGTTAGCTGAAT+CGG + chr3_2:87177501-87177520 None:intergenic 30.0%
TGGAAAACAGGAATTTCATT+AGG + chr3_2:87177782-87177801 None:intergenic 30.0%
TCATGAAATTTGGGAATCAT+AGG + chr3_2:87177812-87177831 None:intergenic 30.0%
ATGATTCCCAAATTTCATGA+AGG - chr3_2:87177812-87177831 Msa0434420:CDS 30.0%
AAACGGAAAGTAAGTATTTC+CGG + chr3_2:87177866-87177885 None:intergenic 30.0%
TGTAGGAAATTTAATTGGCA+AGG - chr3_2:87177904-87177923 Msa0434420:CDS 30.0%
GTAGGAAATTTAATTGGCAA+GGG - chr3_2:87177905-87177924 Msa0434420:CDS 30.0%
CAATAGCACAAATGAGAAAA+TGG + chr3_2:87178053-87178072 None:intergenic 30.0%
TGTGCAAAATAGAATATCCA+GGG - chr3_2:87178165-87178184 Msa0434420:exon 30.0%
AGAAGATGATGAAGTAATTC+AGG - chr3_2:87178354-87178373 Msa0434420:five_prime_UTR 30.0%
CTATGAAAATTATACCCACA+TGG + chr3_2:87178433-87178452 None:intergenic 30.0%
!!! TTCAATTTTAACTTTCACGC+CGG + chr3_2:87176824-87176843 None:intergenic 30.0%
!!! CTGTAATGTTAGTTTTTGAG+AGG - chr3_2:87177067-87177086 Msa0434420:CDS 30.0%
GAAAGTAAAAAGGGTTACTT+TGG - chr3_2:87177114-87177133 Msa0434420:CDS 30.0%
! AAAAGGGTTACTTTGGTTTA+AGG - chr3_2:87177121-87177140 Msa0434420:CDS 30.0%
CTTATCCTTTCTAATCAAGT+TGG - chr3_2:87177147-87177166 Msa0434420:CDS 30.0%
TATGCCTATATGCACTAAAA+TGG - chr3_2:87177314-87177333 Msa0434420:intron 30.0%
!!! TATGCCATTTTAGTGCATAT+AGG + chr3_2:87177321-87177340 None:intergenic 30.0%
TATATGCACTAAAATGGCAT+AGG - chr3_2:87177320-87177339 Msa0434420:intron 30.0%
ATATGCACTAAAATGGCATA+GGG - chr3_2:87177321-87177340 Msa0434420:intron 30.0%
TTCCATGAAATTTCTGTTGT+TGG - chr3_2:87177353-87177372 Msa0434420:intron 30.0%
AACCAACAACAGAAATTTCA+TGG + chr3_2:87177358-87177377 None:intergenic 30.0%
ATACATCAAGTTAGCTGAAT+CGG + chr3_2:87177501-87177520 None:intergenic 30.0%
TGGAAAACAGGAATTTCATT+AGG + chr3_2:87177782-87177801 None:intergenic 30.0%
TCATGAAATTTGGGAATCAT+AGG + chr3_2:87177812-87177831 None:intergenic 30.0%
ATGATTCCCAAATTTCATGA+AGG - chr3_2:87177812-87177831 Msa0434420:CDS 30.0%
AAACGGAAAGTAAGTATTTC+CGG + chr3_2:87177866-87177885 None:intergenic 30.0%
TGTAGGAAATTTAATTGGCA+AGG - chr3_2:87177904-87177923 Msa0434420:CDS 30.0%
GTAGGAAATTTAATTGGCAA+GGG - chr3_2:87177905-87177924 Msa0434420:CDS 30.0%
CAATAGCACAAATGAGAAAA+TGG + chr3_2:87178053-87178072 None:intergenic 30.0%
TGTGCAAAATAGAATATCCA+GGG - chr3_2:87178165-87178184 Msa0434420:exon 30.0%
AGAAGATGATGAAGTAATTC+AGG - chr3_2:87178354-87178373 Msa0434420:five_prime_UTR 30.0%
CTATGAAAATTATACCCACA+TGG + chr3_2:87178433-87178452 None:intergenic 30.0%
AATGATTCGAACCTACAAGA+CGG + chr3_2:87176498-87176517 None:intergenic 35.0%
TATGCCCTGCTAGTAAAATT+GGG - chr3_2:87176749-87176768 Msa0434420:intron 35.0%
! AGTAAAATTGGGGGTGTAAT+TGG - chr3_2:87176760-87176779 Msa0434420:intron 35.0%
TAAAATTGAAGAGCCTGTTC+CGG - chr3_2:87176834-87176853 Msa0434420:CDS 35.0%
TAATGATGAGAGTGAAAGCA+AGG - chr3_2:87176933-87176952 Msa0434420:CDS 35.0%
AATGATGAGAGTGAAAGCAA+GGG - chr3_2:87176934-87176953 Msa0434420:CDS 35.0%
ATTCGAATCCGACTATTATG+AGG - chr3_2:87177043-87177062 Msa0434420:CDS 35.0%
TTCGAATCCGACTATTATGA+GGG - chr3_2:87177044-87177063 Msa0434420:CDS 35.0%
ATTACAGCCCTCATAATAGT+CGG + chr3_2:87177054-87177073 None:intergenic 35.0%
!!! AATGTTAGTTTTTGAGAGGG+TGG - chr3_2:87177071-87177090 Msa0434420:CDS 35.0%
! AGGTGGTGATGAAAGTAAAA+AGG - chr3_2:87177104-87177123 Msa0434420:CDS 35.0%
! GGTGGTGATGAAAGTAAAAA+GGG - chr3_2:87177105-87177124 Msa0434420:CDS 35.0%
TGCATCCAACTTGATTAGAA+AGG + chr3_2:87177155-87177174 None:intergenic 35.0%
!! TAATCAAGTTGGATGCATTC+TGG - chr3_2:87177158-87177177 Msa0434420:CDS 35.0%
!! AATCAAGTTGGATGCATTCT+GGG - chr3_2:87177159-87177178 Msa0434420:CDS 35.0%
TGACCATATGAATGAGATGA+CGG + chr3_2:87177704-87177723 None:intergenic 35.0%
ATGGCACCTTCATGAAATTT+GGG + chr3_2:87177821-87177840 None:intergenic 35.0%
AAATTTCCTACACTTTCGGA+AGG + chr3_2:87177896-87177915 None:intergenic 35.0%
TTCAATGACCTTGATTTCAC+TGG + chr3_2:87177966-87177985 None:intergenic 35.0%
GACTGCATTATCATCATATC+TGG - chr3_2:87178004-87178023 Msa0434420:CDS 35.0%
! TCTCATTTGTGCTATTGTTG+TGG - chr3_2:87178056-87178075 Msa0434420:CDS 35.0%
! CTCATTTGTGCTATTGTTGT+GGG - chr3_2:87178057-87178076 Msa0434420:CDS 35.0%
! TCATTTGTGCTATTGTTGTG+GGG - chr3_2:87178058-87178077 Msa0434420:CDS 35.0%
CAGGAGATATTCTATCATCT+GGG + chr3_2:87178126-87178145 None:intergenic 35.0%
ACAGGAGATATTCTATCATC+TGG + chr3_2:87178127-87178146 None:intergenic 35.0%
GTGTGCAAAATAGAATATCC+AGG - chr3_2:87178164-87178183 Msa0434420:exon 35.0%
TTTACTATCAAGTATAGCCC+TGG + chr3_2:87178185-87178204 None:intergenic 35.0%
TAGGAGACAACCTATATGTT+TGG + chr3_2:87178242-87178261 None:intergenic 35.0%
AAACATATAGGTTGTCTCCT+AGG - chr3_2:87178241-87178260 Msa0434420:intron 35.0%
AACATATAGGTTGTCTCCTA+GGG - chr3_2:87178242-87178261 Msa0434420:intron 35.0%
ATTCCTCATTTCAGCTATGA+TGG + chr3_2:87178278-87178297 None:intergenic 35.0%
GCTGAAATGAGGAATTTATC+AGG - chr3_2:87178283-87178302 Msa0434420:intron 35.0%
!! TCATCTTCTGAAACACACTT+TGG + chr3_2:87178343-87178362 None:intergenic 35.0%
ATCTACAACTTTATCCCATG+TGG - chr3_2:87178415-87178434 Msa0434420:five_prime_UTR 35.0%
TCTACAACTTTATCCCATGT+GGG - chr3_2:87178416-87178435 Msa0434420:five_prime_UTR 35.0%
AATGATTCGAACCTACAAGA+CGG + chr3_2:87176498-87176517 None:intergenic 35.0%
TATGCCCTGCTAGTAAAATT+GGG - chr3_2:87176749-87176768 Msa0434420:intron 35.0%
! AGTAAAATTGGGGGTGTAAT+TGG - chr3_2:87176760-87176779 Msa0434420:intron 35.0%
TAAAATTGAAGAGCCTGTTC+CGG - chr3_2:87176834-87176853 Msa0434420:CDS 35.0%
TAATGATGAGAGTGAAAGCA+AGG - chr3_2:87176933-87176952 Msa0434420:CDS 35.0%
AATGATGAGAGTGAAAGCAA+GGG - chr3_2:87176934-87176953 Msa0434420:CDS 35.0%
ATTCGAATCCGACTATTATG+AGG - chr3_2:87177043-87177062 Msa0434420:CDS 35.0%
TTCGAATCCGACTATTATGA+GGG - chr3_2:87177044-87177063 Msa0434420:CDS 35.0%
ATTACAGCCCTCATAATAGT+CGG + chr3_2:87177054-87177073 None:intergenic 35.0%
!!! AATGTTAGTTTTTGAGAGGG+TGG - chr3_2:87177071-87177090 Msa0434420:CDS 35.0%
! AGGTGGTGATGAAAGTAAAA+AGG - chr3_2:87177104-87177123 Msa0434420:CDS 35.0%
! GGTGGTGATGAAAGTAAAAA+GGG - chr3_2:87177105-87177124 Msa0434420:CDS 35.0%
TGCATCCAACTTGATTAGAA+AGG + chr3_2:87177155-87177174 None:intergenic 35.0%
!! TAATCAAGTTGGATGCATTC+TGG - chr3_2:87177158-87177177 Msa0434420:CDS 35.0%
!! AATCAAGTTGGATGCATTCT+GGG - chr3_2:87177159-87177178 Msa0434420:CDS 35.0%
TGACCATATGAATGAGATGA+CGG + chr3_2:87177704-87177723 None:intergenic 35.0%
ATGGCACCTTCATGAAATTT+GGG + chr3_2:87177821-87177840 None:intergenic 35.0%
AAATTTCCTACACTTTCGGA+AGG + chr3_2:87177896-87177915 None:intergenic 35.0%
TTCAATGACCTTGATTTCAC+TGG + chr3_2:87177966-87177985 None:intergenic 35.0%
GACTGCATTATCATCATATC+TGG - chr3_2:87178004-87178023 Msa0434420:CDS 35.0%
! TCTCATTTGTGCTATTGTTG+TGG - chr3_2:87178056-87178075 Msa0434420:CDS 35.0%
! CTCATTTGTGCTATTGTTGT+GGG - chr3_2:87178057-87178076 Msa0434420:CDS 35.0%
! TCATTTGTGCTATTGTTGTG+GGG - chr3_2:87178058-87178077 Msa0434420:CDS 35.0%
CAGGAGATATTCTATCATCT+GGG + chr3_2:87178126-87178145 None:intergenic 35.0%
ACAGGAGATATTCTATCATC+TGG + chr3_2:87178127-87178146 None:intergenic 35.0%
GTGTGCAAAATAGAATATCC+AGG - chr3_2:87178164-87178183 Msa0434420:exon 35.0%
TTTACTATCAAGTATAGCCC+TGG + chr3_2:87178185-87178204 None:intergenic 35.0%
TAGGAGACAACCTATATGTT+TGG + chr3_2:87178242-87178261 None:intergenic 35.0%
AAACATATAGGTTGTCTCCT+AGG - chr3_2:87178241-87178260 Msa0434420:intron 35.0%
AACATATAGGTTGTCTCCTA+GGG - chr3_2:87178242-87178261 Msa0434420:intron 35.0%
ATTCCTCATTTCAGCTATGA+TGG + chr3_2:87178278-87178297 None:intergenic 35.0%
GCTGAAATGAGGAATTTATC+AGG - chr3_2:87178283-87178302 Msa0434420:intron 35.0%
!! TCATCTTCTGAAACACACTT+TGG + chr3_2:87178343-87178362 None:intergenic 35.0%
ATCTACAACTTTATCCCATG+TGG - chr3_2:87178415-87178434 Msa0434420:five_prime_UTR 35.0%
TCTACAACTTTATCCCATGT+GGG - chr3_2:87178416-87178435 Msa0434420:five_prime_UTR 35.0%
CCTACAAGACGGAGAAAAAT+CGG + chr3_2:87176487-87176506 None:intergenic 40.0%
! CCTGATGGCTTTCTTCTTTT+TGG + chr3_2:87176682-87176701 None:intergenic 40.0%
CCAAAAAGAAGAAAGCCATC+AGG - chr3_2:87176679-87176698 Msa0434420:intron 40.0%
AACGGTGAAAAAACACCTGA+TGG + chr3_2:87176697-87176716 None:intergenic 40.0%
!!! ATCAGGTGTTTTTTCACCGT+TGG - chr3_2:87176696-87176715 Msa0434420:intron 40.0%
ACGCTAGAAGATACATCCAA+CGG + chr3_2:87176715-87176734 None:intergenic 40.0%
CTATGCCCTGCTAGTAAAAT+TGG - chr3_2:87176748-87176767 Msa0434420:intron 40.0%
ATGCCCTGCTAGTAAAATTG+GGG - chr3_2:87176750-87176769 Msa0434420:intron 40.0%
! ATTGGGGGTGTAATTGGTAA+AGG - chr3_2:87176766-87176785 Msa0434420:intron 40.0%
TCACAAATTCGCCATGAAAC+CGG - chr3_2:87176802-87176821 Msa0434420:CDS 40.0%
AAAATTGAAGAGCCTGTTCC+GGG - chr3_2:87176835-87176854 Msa0434420:CDS 40.0%
ATGATGAGAGTGAAAGCAAG+GGG - chr3_2:87176935-87176954 Msa0434420:CDS 40.0%
CTCACTTTGCGAATCTTCAA+CGG + chr3_2:87177016-87177035 None:intergenic 40.0%
TGAAGATTCGCAAAGTGAGA+AGG - chr3_2:87177017-87177036 Msa0434420:CDS 40.0%
AAGAGAATGTCAGCTGAAAG+TGG - chr3_2:87177201-87177220 Msa0434420:CDS 40.0%
AGAGAATGTCAGCTGAAAGT+GGG - chr3_2:87177202-87177221 Msa0434420:CDS 40.0%
AGATTCTGACGAGTTAGTTC+AGG - chr3_2:87177272-87177291 Msa0434420:intron 40.0%
! CATTTGAAGCAGTGAATGAC+TGG - chr3_2:87177379-87177398 Msa0434420:intron 40.0%
CATGATATGGTGTAGATCAC+AGG - chr3_2:87177578-87177597 Msa0434420:CDS 40.0%
!! ATCTGTTTTTCAGCAGCTTG+TGG - chr3_2:87177631-87177650 Msa0434420:CDS 40.0%
!!! AAGGAGCATCTTTTGCTACT+GGG - chr3_2:87177756-87177775 Msa0434420:CDS 40.0%
ATAGGAGCAGAATGGAAAAC+AGG + chr3_2:87177794-87177813 None:intergenic 40.0%
GATGGCACCTTCATGAAATT+TGG + chr3_2:87177822-87177841 None:intergenic 40.0%
AAAGTAAGTATTTCCGGTGG+AGG + chr3_2:87177860-87177879 None:intergenic 40.0%
TTTCGGAAGGACACAGTAAA+CGG + chr3_2:87177883-87177902 None:intergenic 40.0%
GGAAATTTAATTGGCAAGGG+TGG - chr3_2:87177908-87177927 Msa0434420:CDS 40.0%
AAGGTCATTGAAGCCATTCA+GGG - chr3_2:87177974-87177993 Msa0434420:CDS 40.0%
TATCATCATATCTGGTCCAG+CGG - chr3_2:87178012-87178031 Msa0434420:CDS 40.0%
TAGAATATCTCCTGTGCAAG+AGG - chr3_2:87178132-87178151 Msa0434420:CDS 40.0%
! AAGAGCACAGTATGTTAGCA+AGG - chr3_2:87178203-87178222 Msa0434420:five_prime_UTR 40.0%
AGAGCACAGTATGTTAGCAA+GGG - chr3_2:87178204-87178223 Msa0434420:five_prime_UTR 40.0%
GTTCCATCATAGCTGAAATG+AGG - chr3_2:87178272-87178291 Msa0434420:intron 40.0%
CTTTCCCAGCATACGAATAT+GGG + chr3_2:87178311-87178330 None:intergenic 40.0%
CCTACAAGACGGAGAAAAAT+CGG + chr3_2:87176487-87176506 None:intergenic 40.0%
! CCTGATGGCTTTCTTCTTTT+TGG + chr3_2:87176682-87176701 None:intergenic 40.0%
CCAAAAAGAAGAAAGCCATC+AGG - chr3_2:87176679-87176698 Msa0434420:intron 40.0%
AACGGTGAAAAAACACCTGA+TGG + chr3_2:87176697-87176716 None:intergenic 40.0%
!!! ATCAGGTGTTTTTTCACCGT+TGG - chr3_2:87176696-87176715 Msa0434420:intron 40.0%
ACGCTAGAAGATACATCCAA+CGG + chr3_2:87176715-87176734 None:intergenic 40.0%
CTATGCCCTGCTAGTAAAAT+TGG - chr3_2:87176748-87176767 Msa0434420:intron 40.0%
ATGCCCTGCTAGTAAAATTG+GGG - chr3_2:87176750-87176769 Msa0434420:intron 40.0%
! ATTGGGGGTGTAATTGGTAA+AGG - chr3_2:87176766-87176785 Msa0434420:intron 40.0%
TCACAAATTCGCCATGAAAC+CGG - chr3_2:87176802-87176821 Msa0434420:CDS 40.0%
AAAATTGAAGAGCCTGTTCC+GGG - chr3_2:87176835-87176854 Msa0434420:CDS 40.0%
ATGATGAGAGTGAAAGCAAG+GGG - chr3_2:87176935-87176954 Msa0434420:CDS 40.0%
CTCACTTTGCGAATCTTCAA+CGG + chr3_2:87177016-87177035 None:intergenic 40.0%
TGAAGATTCGCAAAGTGAGA+AGG - chr3_2:87177017-87177036 Msa0434420:CDS 40.0%
AAGAGAATGTCAGCTGAAAG+TGG - chr3_2:87177201-87177220 Msa0434420:CDS 40.0%
AGAGAATGTCAGCTGAAAGT+GGG - chr3_2:87177202-87177221 Msa0434420:CDS 40.0%
AGATTCTGACGAGTTAGTTC+AGG - chr3_2:87177272-87177291 Msa0434420:intron 40.0%
! CATTTGAAGCAGTGAATGAC+TGG - chr3_2:87177379-87177398 Msa0434420:intron 40.0%
CATGATATGGTGTAGATCAC+AGG - chr3_2:87177578-87177597 Msa0434420:CDS 40.0%
!! ATCTGTTTTTCAGCAGCTTG+TGG - chr3_2:87177631-87177650 Msa0434420:CDS 40.0%
!!! AAGGAGCATCTTTTGCTACT+GGG - chr3_2:87177756-87177775 Msa0434420:CDS 40.0%
ATAGGAGCAGAATGGAAAAC+AGG + chr3_2:87177794-87177813 None:intergenic 40.0%
GATGGCACCTTCATGAAATT+TGG + chr3_2:87177822-87177841 None:intergenic 40.0%
AAAGTAAGTATTTCCGGTGG+AGG + chr3_2:87177860-87177879 None:intergenic 40.0%
TTTCGGAAGGACACAGTAAA+CGG + chr3_2:87177883-87177902 None:intergenic 40.0%
GGAAATTTAATTGGCAAGGG+TGG - chr3_2:87177908-87177927 Msa0434420:CDS 40.0%
AAGGTCATTGAAGCCATTCA+GGG - chr3_2:87177974-87177993 Msa0434420:CDS 40.0%
TATCATCATATCTGGTCCAG+CGG - chr3_2:87178012-87178031 Msa0434420:CDS 40.0%
TAGAATATCTCCTGTGCAAG+AGG - chr3_2:87178132-87178151 Msa0434420:CDS 40.0%
! AAGAGCACAGTATGTTAGCA+AGG - chr3_2:87178203-87178222 Msa0434420:five_prime_UTR 40.0%
AGAGCACAGTATGTTAGCAA+GGG - chr3_2:87178204-87178223 Msa0434420:five_prime_UTR 40.0%
GTTCCATCATAGCTGAAATG+AGG - chr3_2:87178272-87178291 Msa0434420:intron 40.0%
CTTTCCCAGCATACGAATAT+GGG + chr3_2:87178311-87178330 None:intergenic 40.0%
TGACTTAAGCAGACCTCTTG+GGG + chr3_2:87176387-87176406 None:intergenic 45.0%
GTGACTTAAGCAGACCTCTT+GGG + chr3_2:87176388-87176407 None:intergenic 45.0%
TGTGACTTAAGCAGACCTCT+TGG + chr3_2:87176389-87176408 None:intergenic 45.0%
CGACGGAGCGGAAAAATTAT+CGG + chr3_2:87176436-87176455 None:intergenic 45.0%
! CCGATTTTTCTCCGTCTTGT+AGG - chr3_2:87176484-87176503 Msa0434420:CDS 45.0%
TACTAGCAGGGCATAGCAAA+CGG + chr3_2:87176744-87176763 None:intergenic 45.0%
TGCCCTGCTAGTAAAATTGG+GGG - chr3_2:87176751-87176770 Msa0434420:intron 45.0%
! CACCCCCAATTTTACTAGCA+GGG + chr3_2:87176756-87176775 None:intergenic 45.0%
! ACACCCCCAATTTTACTAGC+AGG + chr3_2:87176757-87176776 None:intergenic 45.0%
!! TAACTTTCACGCCGGTTTCA+TGG + chr3_2:87176816-87176835 None:intergenic 45.0%
ATAACCCTTTCTTCACAGCC+CGG + chr3_2:87176856-87176875 None:intergenic 45.0%
! GAAGAAGGTAGTGTTGAGCA+AGG - chr3_2:87176895-87176914 Msa0434420:CDS 45.0%
! AGGTAGTGTTGAGCAAGGAA+AGG - chr3_2:87176900-87176919 Msa0434420:CDS 45.0%
! TAGTGTTGAGCAAGGAAAGG+AGG - chr3_2:87176903-87176922 Msa0434420:CDS 45.0%
GATGATGAGGGGAAAGAGAA+TGG - chr3_2:87176961-87176980 Msa0434420:CDS 45.0%
! AGTTGGATGCATTCTGGGAA+AGG - chr3_2:87177164-87177183 Msa0434420:CDS 45.0%
! GTTGGATGCATTCTGGGAAA+GGG - chr3_2:87177165-87177184 Msa0434420:CDS 45.0%
GAGAATGTCAGCTGAAAGTG+GGG - chr3_2:87177203-87177222 Msa0434420:CDS 45.0%
CACGCGGGAATTTCTTCTTT+AGG + chr3_2:87177246-87177265 None:intergenic 45.0%
TTGAAGCAGTGAATGACTGG+TGG - chr3_2:87177382-87177401 Msa0434420:intron 45.0%
! GGCTTGTTTACTCTGTCAAG+AGG - chr3_2:87177403-87177422 Msa0434420:intron 45.0%
GATATGGTGTAGATCACAGG+AGG - chr3_2:87177581-87177600 Msa0434420:CDS 45.0%
AGCTTGTGGAGAATTCACCT+CGG - chr3_2:87177645-87177664 Msa0434420:CDS 45.0%
TCTCTGCCTACCAATCTTAC+TGG - chr3_2:87177677-87177696 Msa0434420:CDS 45.0%
CTCTGCCTACCAATCTTACT+GGG - chr3_2:87177678-87177697 Msa0434420:CDS 45.0%
! CGAAAGTGCGTTTAGTTGGT+GGG + chr3_2:87177730-87177749 None:intergenic 45.0%
AGCAAAAGATGCTCCTTGAC+CGG + chr3_2:87177753-87177772 None:intergenic 45.0%
!!! CAAGGAGCATCTTTTGCTAC+TGG - chr3_2:87177755-87177774 Msa0434420:CDS 45.0%
TGGGAATCATAGGAGCAGAA+TGG + chr3_2:87177802-87177821 None:intergenic 45.0%
!! TTTCATGAAGGTGCCATCCT+TGG - chr3_2:87177824-87177843 Msa0434420:CDS 45.0%
CGGAAAGTAAGTATTTCCGG+TGG + chr3_2:87177863-87177882 None:intergenic 45.0%
AGAGACAGCCAGTGAAATCA+AGG - chr3_2:87177955-87177974 Msa0434420:CDS 45.0%
CAAGGTCATTGAAGCCATTC+AGG - chr3_2:87177973-87177992 Msa0434420:CDS 45.0%
GGAAACTTGTACAATACCGC+TGG + chr3_2:87178031-87178050 None:intergenic 45.0%
CGAAATATAGCCTCTTGCAC+AGG + chr3_2:87178145-87178164 None:intergenic 45.0%
TATAGGTTGTCTCCTAGGGA+AGG - chr3_2:87178246-87178265 Msa0434420:intron 45.0%
ATAGGTTGTCTCCTAGGGAA+GGG - chr3_2:87178247-87178266 Msa0434420:intron 45.0%
CCTTTCCCAGCATACGAATA+TGG + chr3_2:87178312-87178331 None:intergenic 45.0%
CCATATTCGTATGCTGGGAA+AGG - chr3_2:87178309-87178328 Msa0434420:intron 45.0%
TCGTATGCTGGGAAAGGATA+AGG - chr3_2:87178315-87178334 Msa0434420:five_prime_UTR 45.0%
CGTATGCTGGGAAAGGATAA+GGG - chr3_2:87178316-87178335 Msa0434420:five_prime_UTR 45.0%
TGACTTAAGCAGACCTCTTG+GGG + chr3_2:87176387-87176406 None:intergenic 45.0%
GTGACTTAAGCAGACCTCTT+GGG + chr3_2:87176388-87176407 None:intergenic 45.0%
TGTGACTTAAGCAGACCTCT+TGG + chr3_2:87176389-87176408 None:intergenic 45.0%
CGACGGAGCGGAAAAATTAT+CGG + chr3_2:87176436-87176455 None:intergenic 45.0%
! CCGATTTTTCTCCGTCTTGT+AGG - chr3_2:87176484-87176503 Msa0434420:CDS 45.0%
TACTAGCAGGGCATAGCAAA+CGG + chr3_2:87176744-87176763 None:intergenic 45.0%
TGCCCTGCTAGTAAAATTGG+GGG - chr3_2:87176751-87176770 Msa0434420:intron 45.0%
! CACCCCCAATTTTACTAGCA+GGG + chr3_2:87176756-87176775 None:intergenic 45.0%
! ACACCCCCAATTTTACTAGC+AGG + chr3_2:87176757-87176776 None:intergenic 45.0%
!! TAACTTTCACGCCGGTTTCA+TGG + chr3_2:87176816-87176835 None:intergenic 45.0%
ATAACCCTTTCTTCACAGCC+CGG + chr3_2:87176856-87176875 None:intergenic 45.0%
! GAAGAAGGTAGTGTTGAGCA+AGG - chr3_2:87176895-87176914 Msa0434420:CDS 45.0%
! AGGTAGTGTTGAGCAAGGAA+AGG - chr3_2:87176900-87176919 Msa0434420:CDS 45.0%
! TAGTGTTGAGCAAGGAAAGG+AGG - chr3_2:87176903-87176922 Msa0434420:CDS 45.0%
GATGATGAGGGGAAAGAGAA+TGG - chr3_2:87176961-87176980 Msa0434420:CDS 45.0%
! AGTTGGATGCATTCTGGGAA+AGG - chr3_2:87177164-87177183 Msa0434420:CDS 45.0%
! GTTGGATGCATTCTGGGAAA+GGG - chr3_2:87177165-87177184 Msa0434420:CDS 45.0%
GAGAATGTCAGCTGAAAGTG+GGG - chr3_2:87177203-87177222 Msa0434420:CDS 45.0%
CACGCGGGAATTTCTTCTTT+AGG + chr3_2:87177246-87177265 None:intergenic 45.0%
TTGAAGCAGTGAATGACTGG+TGG - chr3_2:87177382-87177401 Msa0434420:intron 45.0%
! GGCTTGTTTACTCTGTCAAG+AGG - chr3_2:87177403-87177422 Msa0434420:intron 45.0%
GATATGGTGTAGATCACAGG+AGG - chr3_2:87177581-87177600 Msa0434420:CDS 45.0%
AGCTTGTGGAGAATTCACCT+CGG - chr3_2:87177645-87177664 Msa0434420:CDS 45.0%
TCTCTGCCTACCAATCTTAC+TGG - chr3_2:87177677-87177696 Msa0434420:CDS 45.0%
CTCTGCCTACCAATCTTACT+GGG - chr3_2:87177678-87177697 Msa0434420:CDS 45.0%
! CGAAAGTGCGTTTAGTTGGT+GGG + chr3_2:87177730-87177749 None:intergenic 45.0%
AGCAAAAGATGCTCCTTGAC+CGG + chr3_2:87177753-87177772 None:intergenic 45.0%
!!! CAAGGAGCATCTTTTGCTAC+TGG - chr3_2:87177755-87177774 Msa0434420:CDS 45.0%
TGGGAATCATAGGAGCAGAA+TGG + chr3_2:87177802-87177821 None:intergenic 45.0%
!! TTTCATGAAGGTGCCATCCT+TGG - chr3_2:87177824-87177843 Msa0434420:CDS 45.0%
CGGAAAGTAAGTATTTCCGG+TGG + chr3_2:87177863-87177882 None:intergenic 45.0%
AGAGACAGCCAGTGAAATCA+AGG - chr3_2:87177955-87177974 Msa0434420:CDS 45.0%
CAAGGTCATTGAAGCCATTC+AGG - chr3_2:87177973-87177992 Msa0434420:CDS 45.0%
GGAAACTTGTACAATACCGC+TGG + chr3_2:87178031-87178050 None:intergenic 45.0%
CGAAATATAGCCTCTTGCAC+AGG + chr3_2:87178145-87178164 None:intergenic 45.0%
TATAGGTTGTCTCCTAGGGA+AGG - chr3_2:87178246-87178265 Msa0434420:intron 45.0%
ATAGGTTGTCTCCTAGGGAA+GGG - chr3_2:87178247-87178266 Msa0434420:intron 45.0%
CCTTTCCCAGCATACGAATA+TGG + chr3_2:87178312-87178331 None:intergenic 45.0%
CCATATTCGTATGCTGGGAA+AGG - chr3_2:87178309-87178328 Msa0434420:intron 45.0%
TCGTATGCTGGGAAAGGATA+AGG - chr3_2:87178315-87178334 Msa0434420:five_prime_UTR 45.0%
CGTATGCTGGGAAAGGATAA+GGG - chr3_2:87178316-87178335 Msa0434420:five_prime_UTR 45.0%
!! CTGAATGAGTTTGGGTTGGG+CGG - chr3_2:87176348-87176367 Msa0434420:CDS 50.0%
GACTTAAGCAGACCTCTTGG+GGG + chr3_2:87176386-87176405 None:intergenic 50.0%
GAGGTCTGCTTAAGTCACAC+TGG - chr3_2:87176390-87176409 Msa0434420:CDS 50.0%
AGACGGAGAAAAATCGGCAC+CGG + chr3_2:87176481-87176500 None:intergenic 50.0%
! GGGGGTGTAATTGGTAAAGG+TGG - chr3_2:87176769-87176788 Msa0434420:intron 50.0%
TGTTCCGGGCTGTGAAGAAA+GGG - chr3_2:87176849-87176868 Msa0434420:CDS 50.0%
TGAGAGTGAAAGCAAGGGGA+AGG - chr3_2:87176939-87176958 Msa0434420:CDS 50.0%
AAGCAAGGGGAAGGATGATG+AGG - chr3_2:87176948-87176967 Msa0434420:CDS 50.0%
AGCAAGGGGAAGGATGATGA+GGG - chr3_2:87176949-87176968 Msa0434420:CDS 50.0%
!! AGTTTTTGAGAGGGTGGCTG+AGG - chr3_2:87177077-87177096 Msa0434420:CDS 50.0%
CAGGAGGAGTAGAAGTTGTC+AGG - chr3_2:87177597-87177616 Msa0434420:CDS 50.0%
GCTTGTGGAGAATTCACCTC+GGG - chr3_2:87177646-87177665 Msa0434420:CDS 50.0%
! AGATGACGGCCCAGTAAGAT+TGG + chr3_2:87177690-87177709 None:intergenic 50.0%
GGGCCGTCATCTCATTCATA+TGG - chr3_2:87177698-87177717 Msa0434420:CDS 50.0%
! GCGAAAGTGCGTTTAGTTGG+TGG + chr3_2:87177731-87177750 None:intergenic 50.0%
CCAACTAAACGCACTTTCGC+CGG - chr3_2:87177731-87177750 Msa0434420:CDS 50.0%
! CTGTGTCCTTCCGAAAGTGT+AGG - chr3_2:87177887-87177906 Msa0434420:CDS 50.0%
TGAAGCCATTCAGGGTTCAG+AGG - chr3_2:87177982-87178001 Msa0434420:CDS 50.0%
AGGTGCCCATATTCGTATGC+TGG - chr3_2:87178303-87178322 Msa0434420:intron 50.0%
GGTGCCCATATTCGTATGCT+GGG - chr3_2:87178304-87178323 Msa0434420:intron 50.0%
!! CTGAATGAGTTTGGGTTGGG+CGG - chr3_2:87176348-87176367 Msa0434420:CDS 50.0%
GACTTAAGCAGACCTCTTGG+GGG + chr3_2:87176386-87176405 None:intergenic 50.0%
GAGGTCTGCTTAAGTCACAC+TGG - chr3_2:87176390-87176409 Msa0434420:CDS 50.0%
AGACGGAGAAAAATCGGCAC+CGG + chr3_2:87176481-87176500 None:intergenic 50.0%
! GGGGGTGTAATTGGTAAAGG+TGG - chr3_2:87176769-87176788 Msa0434420:intron 50.0%
TGTTCCGGGCTGTGAAGAAA+GGG - chr3_2:87176849-87176868 Msa0434420:CDS 50.0%
TGAGAGTGAAAGCAAGGGGA+AGG - chr3_2:87176939-87176958 Msa0434420:CDS 50.0%
AAGCAAGGGGAAGGATGATG+AGG - chr3_2:87176948-87176967 Msa0434420:CDS 50.0%
AGCAAGGGGAAGGATGATGA+GGG - chr3_2:87176949-87176968 Msa0434420:CDS 50.0%
!! AGTTTTTGAGAGGGTGGCTG+AGG - chr3_2:87177077-87177096 Msa0434420:CDS 50.0%
CAGGAGGAGTAGAAGTTGTC+AGG - chr3_2:87177597-87177616 Msa0434420:CDS 50.0%
GCTTGTGGAGAATTCACCTC+GGG - chr3_2:87177646-87177665 Msa0434420:CDS 50.0%
! AGATGACGGCCCAGTAAGAT+TGG + chr3_2:87177690-87177709 None:intergenic 50.0%
GGGCCGTCATCTCATTCATA+TGG - chr3_2:87177698-87177717 Msa0434420:CDS 50.0%
! GCGAAAGTGCGTTTAGTTGG+TGG + chr3_2:87177731-87177750 None:intergenic 50.0%
CCAACTAAACGCACTTTCGC+CGG - chr3_2:87177731-87177750 Msa0434420:CDS 50.0%
! CTGTGTCCTTCCGAAAGTGT+AGG - chr3_2:87177887-87177906 Msa0434420:CDS 50.0%
TGAAGCCATTCAGGGTTCAG+AGG - chr3_2:87177982-87178001 Msa0434420:CDS 50.0%
AGGTGCCCATATTCGTATGC+TGG - chr3_2:87178303-87178322 Msa0434420:intron 50.0%
GGTGCCCATATTCGTATGCT+GGG - chr3_2:87178304-87178323 Msa0434420:intron 50.0%
TTAAGTCACACTGGCGAGCG+AGG - chr3_2:87176399-87176418 Msa0434420:CDS 55.0%
TAAGTCACACTGGCGAGCGA+GGG - chr3_2:87176400-87176419 Msa0434420:CDS 55.0%
CTTTCTTCACAGCCCGGAAC+AGG + chr3_2:87176850-87176869 None:intergenic 55.0%
CTGTTCCGGGCTGTGAAGAA+AGG - chr3_2:87176848-87176867 Msa0434420:CDS 55.0%
GCAAGGGGAAGGATGATGAG+GGG - chr3_2:87176950-87176969 Msa0434420:CDS 55.0%
! GGATGCATTCTGGGAAAGGG+TGG - chr3_2:87177168-87177187 Msa0434420:CDS 55.0%
TCAGAATCTGACGCACACGC+GGG + chr3_2:87177261-87177280 None:intergenic 55.0%
GTCAGAATCTGACGCACACG+CGG + chr3_2:87177262-87177281 None:intergenic 55.0%
GACGGCCCAGTAAGATTGGT+AGG + chr3_2:87177686-87177705 None:intergenic 55.0%
! CCGGCGAAAGTGCGTTTAGT+TGG + chr3_2:87177734-87177753 None:intergenic 55.0%
AAACGCACTTTCGCCGGTCA+AGG - chr3_2:87177737-87177756 Msa0434420:CDS 55.0%
GCAGTCCTCTGAACCCTGAA+TGG + chr3_2:87177990-87178009 None:intergenic 55.0%
TGATGGAACCACCCTTCCCT+AGG + chr3_2:87178261-87178280 None:intergenic 55.0%
TTAAGTCACACTGGCGAGCG+AGG - chr3_2:87176399-87176418 Msa0434420:CDS 55.0%
TAAGTCACACTGGCGAGCGA+GGG - chr3_2:87176400-87176419 Msa0434420:CDS 55.0%
CTTTCTTCACAGCCCGGAAC+AGG + chr3_2:87176850-87176869 None:intergenic 55.0%
CTGTTCCGGGCTGTGAAGAA+AGG - chr3_2:87176848-87176867 Msa0434420:CDS 55.0%
GCAAGGGGAAGGATGATGAG+GGG - chr3_2:87176950-87176969 Msa0434420:CDS 55.0%
! GGATGCATTCTGGGAAAGGG+TGG - chr3_2:87177168-87177187 Msa0434420:CDS 55.0%
TCAGAATCTGACGCACACGC+GGG + chr3_2:87177261-87177280 None:intergenic 55.0%
GTCAGAATCTGACGCACACG+CGG + chr3_2:87177262-87177281 None:intergenic 55.0%
GACGGCCCAGTAAGATTGGT+AGG + chr3_2:87177686-87177705 None:intergenic 55.0%
! CCGGCGAAAGTGCGTTTAGT+TGG + chr3_2:87177734-87177753 None:intergenic 55.0%
AAACGCACTTTCGCCGGTCA+AGG - chr3_2:87177737-87177756 Msa0434420:CDS 55.0%
GCAGTCCTCTGAACCCTGAA+TGG + chr3_2:87177990-87178009 None:intergenic 55.0%
TGATGGAACCACCCTTCCCT+AGG + chr3_2:87178261-87178280 None:intergenic 55.0%
CCTCTTGGGGGACTGCGTAT+GGG + chr3_2:87176374-87176393 None:intergenic 60.0%
ACCTCTTGGGGGACTGCGTA+TGG + chr3_2:87176375-87176394 None:intergenic 60.0%
ACGGTGAGGGCAGAGAACGA+CGG + chr3_2:87176453-87176472 None:intergenic 60.0%
!! AAAATCGGCACCGGCGTCGA+CGG + chr3_2:87176472-87176491 None:intergenic 60.0%
GAGAGGGTGGCTGAGGATGA+AGG - chr3_2:87177084-87177103 Msa0434420:CDS 60.0%
AGGGTGGCTGAGGATGAAGG+TGG - chr3_2:87177087-87177106 Msa0434420:CDS 60.0%
GGCAGAGACTCATGATCCCG+AGG + chr3_2:87177665-87177684 None:intergenic 60.0%
GTGCCATCCTTGGTCGCATG+AGG - chr3_2:87177834-87177853 Msa0434420:CDS 60.0%
AGGCCTCATGCGACCAAGGA+TGG + chr3_2:87177840-87177859 None:intergenic 60.0%
GGTTGTCTCCTAGGGAAGGG+TGG - chr3_2:87178250-87178269 Msa0434420:intron 60.0%
CCTCTTGGGGGACTGCGTAT+GGG + chr3_2:87176374-87176393 None:intergenic 60.0%
ACCTCTTGGGGGACTGCGTA+TGG + chr3_2:87176375-87176394 None:intergenic 60.0%
ACGGTGAGGGCAGAGAACGA+CGG + chr3_2:87176453-87176472 None:intergenic 60.0%
!! AAAATCGGCACCGGCGTCGA+CGG + chr3_2:87176472-87176491 None:intergenic 60.0%
GAGAGGGTGGCTGAGGATGA+AGG - chr3_2:87177084-87177103 Msa0434420:CDS 60.0%
AGGGTGGCTGAGGATGAAGG+TGG - chr3_2:87177087-87177106 Msa0434420:CDS 60.0%
GGCAGAGACTCATGATCCCG+AGG + chr3_2:87177665-87177684 None:intergenic 60.0%
GTGCCATCCTTGGTCGCATG+AGG - chr3_2:87177834-87177853 Msa0434420:CDS 60.0%
AGGCCTCATGCGACCAAGGA+TGG + chr3_2:87177840-87177859 None:intergenic 60.0%
GGTTGTCTCCTAGGGAAGGG+TGG - chr3_2:87178250-87178269 Msa0434420:intron 60.0%
CCCATACGCAGTCCCCCAAG+AGG - chr3_2:87176371-87176390 Msa0434420:CDS 65.0%
GAGGGCAGAGAACGACGGAG+CGG + chr3_2:87176448-87176467 None:intergenic 65.0%
GTGGAGGCCTCATGCGACCA+AGG + chr3_2:87177844-87177863 None:intergenic 65.0%
TGGTCGCATGAGGCCTCCAC+CGG - chr3_2:87177844-87177863 Msa0434420:CDS 65.0%
CCCATACGCAGTCCCCCAAG+AGG - chr3_2:87176371-87176390 Msa0434420:CDS 65.0%
GAGGGCAGAGAACGACGGAG+CGG + chr3_2:87176448-87176467 None:intergenic 65.0%
GTGGAGGCCTCATGCGACCA+AGG + chr3_2:87177844-87177863 None:intergenic 65.0%
TGGTCGCATGAGGCCTCCAC+CGG - chr3_2:87177844-87177863 Msa0434420:CDS 65.0%
TCTGCCCTCACCGTCGACGC+CGG - chr3_2:87176459-87176478 Msa0434420:CDS 70.0%
TCTGCCCTCACCGTCGACGC+CGG - chr3_2:87176459-87176478 Msa0434420:CDS 70.0%
!! GGCACCGGCGTCGACGGTGA+GGG + chr3_2:87176466-87176485 None:intergenic 75.0%
!! GGCACCGGCGTCGACGGTGA+GGG + chr3_2:87176466-87176485 None:intergenic 75.0%
!!! CGGCACCGGCGTCGACGGTG+AGG + chr3_2:87176467-87176486 None:intergenic 80.0%
!!! CGGCACCGGCGTCGACGGTG+AGG + chr3_2:87176467-87176486 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 87176346 87178471 87176346 ID=Msa0434420;Name=Msa0434420
chr3_2 mRNA 87176346 87178471 87176346 ID=Msa0434420-mRNA-1;Parent=Msa0434420;Name=Msa0434420-mRNA-1;_AED=0.09;_eAED=0.09;_QI=209|1|0.75|1|0.66|0.75|4|0|481
chr3_2 exon 87176346 87176696 87176346 ID=Msa0434420-mRNA-1:exon:25403;Parent=Msa0434420-mRNA-1
chr3_2 exon 87176784 87177224 87176784 ID=Msa0434420-mRNA-1:exon:25402;Parent=Msa0434420-mRNA-1
chr3_2 exon 87177524 87178226 87177524 ID=Msa0434420-mRNA-1:exon:25401;Parent=Msa0434420-mRNA-1
chr3_2 exon 87178312 87178471 87178312 ID=Msa0434420-mRNA-1:exon:25400;Parent=Msa0434420-mRNA-1
chr3_2 five_prime_UTR 87178312 87178471 87178312 ID=Msa0434420-mRNA-1:five_prime_utr;Parent=Msa0434420-mRNA-1
chr3_2 five_prime_UTR 87178178 87178226 87178178 ID=Msa0434420-mRNA-1:five_prime_utr;Parent=Msa0434420-mRNA-1
chr3_2 CDS 87177524 87178177 87177524 ID=Msa0434420-mRNA-1:cds;Parent=Msa0434420-mRNA-1
chr3_2 CDS 87176784 87177224 87176784 ID=Msa0434420-mRNA-1:cds;Parent=Msa0434420-mRNA-1
chr3_2 CDS 87176346 87176696 87176346 ID=Msa0434420-mRNA-1:cds;Parent=Msa0434420-mRNA-1
Gene Sequence

>Msa0434420

ATGACTAAGAGACCAAAGAAATCAGAATCAAATAGGAGACCAAAAAGAAGAAAGCCATCAGGTGTTTTTTCACCGTTGGATGTATCTTCTAGCGTTGTTTTCCGTTTGCTATGCCCTGCTAGTAAAATTGGGGGTGTAATTGGTAAAGGTGGTTCTATTATATCACAAATTCGCCATGAAACCGGCGTGAAAGTTAAAATTGAAGAGCCTGTTCCGGGCTGTGAAGAAAGGGTTATAACTTTTTTAAAAGAGAGTGAAGAAGGTAGTGTTGAGCAAGGAAAGGAGGTTAATGATAATGATGAGAGTGAAAGCAAGGGGAAGGATGATGAGGGGAAAGAGAATGGCGATGATAATGAAGACAAAGATTCTGTTTCCGTTGAAGATTCGCAAAGTGAGAAGGTGAATTCGAATCCGACTATTATGAGGGCTGTAATGTTAGTTTTTGAGAGGGTGGCTGAGGATGAAGGTGGTGATGAAAGTAAAAAGGGTTACTTTGGTTTAAGGCTACTTATCCTTTCTAATCAAGTTGGATGCATTCTGGGAAAGGGTGGCAGTGTGATAAAGAGAATGTCAGCTGAAAGTGGGGCGCAGATTCGAATTCTTCCTAAAGAAGAAATTCCCGCGTGTGCGTCAGATTCTGACGAGTTAGTTCAGATCACAGGAGGAGTAGAAGTTGTCAGGAGAGCTCTGCAATCTGTTTTTCAGCAGCTTGTGGAGAATTCACCTCGGGATCATGAGTCTCTGCCTACCAATCTTACTGGGCCGTCATCTCATTCATATGGTCAATTCCCACCAACTAAACGCACTTTCGCCGGTCAAGGAGCATCTTTTGCTACTGGGCCTAATGAAATTCCTGTTTTCCATTCTGCTCCTATGATTCCCAAATTTCATGAAGGTGCCATCCTTGGTCGCATGAGGCCTCCACCGGAAATACTTACTTTCCGTTTACTGTGTCCTTCCGAAAGTGTAGGAAATTTAATTGGCAAGGGTGGATCAATCATAAAGATGCTGCAACAAGAGACAGCCAGTGAAATCAAGGTCATTGAAGCCATTCAGGGTTCAGAGGACTGCATTATCATCATATCTGGTCCAGCGCACCCAGATGATAGAATATCTCCTGTGCAAGAGGCTATATTTCGTGTGCAAAATAGAATATCCAGGGCTATACTTGATAGTAAAGAGCACAGTATGTTAGCAAGGGTCATTGTTTCTTCCAAACATATAGGTTGTCTCCTAGGGAAGGGTGGTTCCATCATAGCTGAAATGAGGAATTTATCAGGTGCCCATATTCGTATGCTGGGAAAGGATAAGGGTCCAAAGTGTGTTTCAGAAGATGATGAAGTAATTCAGGTTCAATTTCTACCATATCTGATATTGTGTATATTTAAAATCTACAACTTTATCCCATGTGGGTATAATTTTCATAGTAATGCTGATATATTGTAA
Protein sequence

>Msa0434420

MTKRPKKSESNRRPKRRKPSGVFSPLDVSSSVVFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKIEEPVPGCEERVITFLKESEEGSVEQGKEVNDNDESESKGKDDEGKENGDDNEDKDSVSVEDSQSEKVNSNPTIMRAVMLVFERVAEDEGGDESKKGYFGLRLLILSNQVGCILGKGGSVIKRMSAESGAQIRILPKEEIPACASDSDELVQITGGVEVVRRALQSVFQQLVENSPRDHESLPTNLTGPSSHSYGQFPPTKRTFAGQGASFATGPNEIPVFHSAPMIPKFHEGAILGRMRPPPEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIQGSEDCIIIISGPAHPDDRISPVQEAIFRVQNRISRAILDSKEHSMLARVIVSSKHIGCLLGKGGSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVQFLPYLILCIFKIYNFIPCGYNFHSNADIL*