Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0440230 | XP_003599125.1 | 97.723 | 483 | 8 | 2 | 1 | 482 | 1 | 481 | 0.0 | 979 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0440230 | sp|E0X9N4|C3H69_ARATH | 49.593 | 369 | 153 | 9 | 1 | 357 | 1 | 348 | 5.92e-108 | 327 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0440230 | G7IWL7 | 97.723 | 483 | 8 | 2 | 1 | 482 | 1 | 481 | 0.0 | 979 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0440230 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0440230 | Msa0494210 | 0.952361 | 2.858601e-110 | -8.615850e-47 |
| Msa0440230 | Msa0494400 | 0.951615 | 1.403607e-109 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0440230 | MtrunA17_Chr3g0087881 | 91.304 | 483 | 11 | 2 | 1 | 482 | 1 | 453 | 0.0 | 904 |
| Msa0440230 | MtrunA17_Chr3g0087891 | 52.888 | 329 | 126 | 8 | 1 | 307 | 1 | 322 | 5.86e-106 | 319 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0440230 | AT3G08505.1 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 2.74e-99 | 301 |
| Msa0440230 | AT3G08505.2 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 2.74e-99 | 301 |
| Msa0440230 | AT3G08505.3 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 2.74e-99 | 301 |
Find 121 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCAAGAGGCCATGGTTTC+TGG | 0.092914 | 3_3:+7081543 | Msa0440230:CDS |
| AATCTTTCCATAGGGTATTA+TGG | 0.172622 | 3_3:-7081958 | None:intergenic |
| CCTGCATCCTACTGATAAAA+AGG | 0.246259 | 3_3:+7077792 | Msa0440230:CDS |
| GTTTCTGGGATAGATGATTT+TGG | 0.250360 | 3_3:+7081558 | Msa0440230:CDS |
| CAGAAAGGGTCTTGTGCTTA+TGG | 0.259648 | 3_3:+7077448 | Msa0440230:CDS |
| GATTCGCTGGCTGGCGGTTC+AGG | 0.263297 | 3_3:+7081363 | Msa0440230:CDS |
| GTGCTAAAGTAGCATCAAAT+TGG | 0.277566 | 3_3:+7077560 | Msa0440230:CDS |
| ATCTTTCCATAGGGTATTAT+GGG | 0.286860 | 3_3:-7081957 | None:intergenic |
| TAAGCCAAAACTCCTTAAAA+TGG | 0.290440 | 3_3:-7081882 | None:intergenic |
| AGCATCATCTTCAGCATCTA+TGG | 0.292528 | 3_3:+7077507 | Msa0440230:CDS |
| TTTGAGGACTTGTGACAAAA+AGG | 0.300862 | 3_3:+7077828 | Msa0440230:CDS |
| GCTCTTGGGATGGATGCTTT+TGG | 0.301364 | 3_3:+7081468 | Msa0440230:CDS |
| TTGTCATTCCAAGTGGTATT+TGG | 0.301592 | 3_3:+7078091 | Msa0440230:CDS |
| AAGCCATCAGAATGTAAGTT+TGG | 0.301620 | 3_3:+7077928 | Msa0440230:CDS |
| TGGCGGTTCAGGTCCTTGTT+TGG | 0.314287 | 3_3:+7081374 | Msa0440230:CDS |
| GGCGGTTCAGGTCCTTGTTT+GGG | 0.319796 | 3_3:+7081375 | Msa0440230:CDS |
| GGAAATGGAAATTGTCCATT+TGG | 0.321258 | 3_3:+7078301 | Msa0440230:CDS |
| TCCTCATCGTCATCGTCATC+AGG | 0.328553 | 3_3:-7081492 | None:intergenic |
| AGGTGACACAACTTAGTTAA+AGG | 0.354092 | 3_3:-7081763 | None:intergenic |
| ATGCAAGAGGCCATGGCTCT+TGG | 0.356930 | 3_3:+7081453 | Msa0440230:CDS |
| TATGATAGTTTGCGGCAAAC+AGG | 0.366308 | 3_3:-7078066 | None:intergenic |
| CAGAAAGCGTGATCACATTC+TGG | 0.369919 | 3_3:-7077958 | None:intergenic |
| GAAATGGAAATTGTCCATTT+GGG | 0.373127 | 3_3:+7078302 | Msa0440230:CDS |
| GTTTGTCATGTATTCGCAAT+TGG | 0.373825 | 3_3:+7077980 | Msa0440230:CDS |
| CGATTTCCATTGCAGAGGTT+GGG | 0.374375 | 3_3:-7078014 | None:intergenic |
| CCCTTTACACCACGCTTGTC+AGG | 0.379427 | 3_3:-7077610 | None:intergenic |
| AAACTTACATTCTGATGGCT+TGG | 0.395562 | 3_3:-7077926 | None:intergenic |
| CCTGACAAGCGTGGTGTAAA+GGG | 0.396694 | 3_3:+7077610 | Msa0440230:CDS |
| TGCAAGAGGCCATGGTTTCT+GGG | 0.408782 | 3_3:+7081544 | Msa0440230:CDS |
| AACTTACATTCTGATGGCTT+GGG | 0.410250 | 3_3:-7077925 | None:intergenic |
| TGCAAGAGGCCATGGCTCTT+GGG | 0.417374 | 3_3:+7081454 | Msa0440230:CDS |
| AATGATGATGCATTCTCATA+TGG | 0.418914 | 3_3:+7081629 | Msa0440230:CDS |
| TCAATTCCATGAAAATCATC+AGG | 0.425647 | 3_3:-7081582 | None:intergenic |
| ATAATACCCTATGGAAAGAT+TGG | 0.430057 | 3_3:+7081960 | Msa0440230:three_prime_UTR |
| TGATGAATATTAGATTTACT+TGG | 0.430199 | 3_3:+7081701 | Msa0440230:exon |
| ACCTGACAAGCGTGGTGTAA+AGG | 0.433230 | 3_3:+7077609 | Msa0440230:CDS |
| TCTTATGAAAATCATTTGGC+AGG | 0.435477 | 3_3:+7081792 | Msa0440230:three_prime_UTR |
| GATAATGCCATCATCTCAAA+TGG | 0.443626 | 3_3:-7081339 | None:intergenic |
| AAAATCTCACCATGTCCAAC+AGG | 0.444234 | 3_3:+7076475 | Msa0440230:exon |
| AGCCATCAGAATGTAAGTTT+GGG | 0.447348 | 3_3:+7077929 | Msa0440230:CDS |
| CCGATTTCCATTGCAGAGGT+TGG | 0.450187 | 3_3:-7078015 | None:intergenic |
| GATTCAGACGATGAGGATGA+TGG | 0.450779 | 3_3:+7081405 | Msa0440230:CDS |
| CCAACCTCTGCAATGGAAAT+CGG | 0.452415 | 3_3:+7078015 | Msa0440230:CDS |
| TTTGCTCTTATTATCAGAAA+GGG | 0.457240 | 3_3:+7077434 | Msa0440230:CDS |
| ACATGTCATGCATATCGAAA+TGG | 0.462288 | 3_3:-7081233 | None:intergenic |
| TGCTGCTATGCAAGAGGCCA+TGG | 0.469668 | 3_3:+7081446 | Msa0440230:CDS |
| ATTTGCTCTTATTATCAGAA+AGG | 0.469932 | 3_3:+7077433 | Msa0440230:CDS |
| TACCCTATGGAAAGATTGGT+TGG | 0.476893 | 3_3:+7081964 | Msa0440230:three_prime_UTR |
| GGGTTTACAACGCAAGCATC+AGG | 0.478209 | 3_3:+7077630 | Msa0440230:CDS |
| GCATTATCAGATTCGCTGGC+TGG | 0.489570 | 3_3:+7081354 | Msa0440230:CDS |
| TGCTAAAGTAGCATCAAATT+GGG | 0.490703 | 3_3:+7077561 | Msa0440230:CDS |
| AATGGATCCATTTGAGATGA+TGG | 0.491467 | 3_3:+7081332 | Msa0440230:CDS |
| GATTTCCATTGCAGAGGTTG+GGG | 0.493235 | 3_3:-7078013 | None:intergenic |
| TAGAAACAGCTAGCCCCAAA+TGG | 0.494880 | 3_3:-7078316 | None:intergenic |
| GGCTGCTATGCAAGAGGCCA+TGG | 0.495488 | 3_3:+7081536 | Msa0440230:CDS |
| TGGTCTAGCACTACCAGTAC+TGG | 0.497170 | 3_3:-7077674 | None:intergenic |
| TGTCTCCATGTGTATGAGCC+AGG | 0.499940 | 3_3:-7081180 | None:intergenic |
| TCCTCATCGTCTGAATCAAA+AGG | 0.507460 | 3_3:-7081399 | None:intergenic |
| AAACCAACCAATCTTTCCAT+AGG | 0.507522 | 3_3:-7081967 | None:intergenic |
| GAAGGAACCTTTGTAACCTT+CGG | 0.509713 | 3_3:-7077586 | None:intergenic |
| AGGGCAGGTTCTCACTGTAT+TGG | 0.515799 | 3_3:-7078046 | None:intergenic |
| GATGGCATTATCAGATTCGC+TGG | 0.519486 | 3_3:+7081350 | Msa0440230:CDS |
| GTGAATCCCATAATACCCTA+TGG | 0.520258 | 3_3:+7081951 | Msa0440230:three_prime_UTR |
| TAGTTTGCGGCAAACAGGGC+AGG | 0.521329 | 3_3:-7078061 | None:intergenic |
| TGACAAAATATGATAGTTTG+CGG | 0.523339 | 3_3:-7078074 | None:intergenic |
| AGGAAAAGGAAAATCATTTG+AGG | 0.527601 | 3_3:+7077812 | Msa0440230:CDS |
| AAAATCTGAGTCCCTCATGA+TGG | 0.533480 | 3_3:-7081301 | None:intergenic |
| TGGGGCTAGCTGTTTCTACA+AGG | 0.535393 | 3_3:+7078321 | Msa0440230:CDS |
| CTGATGGCTTGGGTTTCGAA+AGG | 0.535450 | 3_3:-7077915 | None:intergenic |
| ATTCAGACGATGAGGATGAT+GGG | 0.536703 | 3_3:+7081406 | Msa0440230:CDS |
| GCGCGAGGCGTATGTTTGAA+AGG | 0.542739 | 3_3:+7077112 | Msa0440230:CDS |
| TTTGCTGCTGCCAACTGCCC+CGG | 0.543300 | 3_3:+7077718 | Msa0440230:CDS |
| TTCAGATTCTGCTGCGCCTG+TGG | 0.544702 | 3_3:+7077531 | Msa0440230:CDS |
| AACCCAAACTTACATTCTGA+TGG | 0.549424 | 3_3:-7077931 | None:intergenic |
| AACCAACCAATCTTTCCATA+GGG | 0.553971 | 3_3:-7081966 | None:intergenic |
| TTTCAGCATACAGTGAAGCC+TGG | 0.555178 | 3_3:+7081162 | Msa0440230:intron |
| ATGATAGTTTGCGGCAAACA+GGG | 0.556192 | 3_3:-7078065 | None:intergenic |
| GATATCAAAGCTGCATCCAT+AGG | 0.558891 | 3_3:-7081606 | None:intergenic |
| TCAAATTGCTGCTATGCAAG+AGG | 0.561508 | 3_3:+7081440 | Msa0440230:CDS |
| AGAACATCCACCGGGGCAGT+TGG | 0.563489 | 3_3:-7077728 | None:intergenic |
| TGGTATTTGGTTTACTACAA+AGG | 0.568402 | 3_3:+7078104 | Msa0440230:CDS |
| GATGCTACTAAACTTTAACT+AGG | 0.569840 | 3_3:-7081994 | None:intergenic |
| AGCATCAAATTGGGTTCCGA+AGG | 0.575611 | 3_3:+7077570 | Msa0440230:CDS |
| TGCGTTGAGGTGGTGGCCTG+CGG | 0.577755 | 3_3:-7081203 | None:intergenic |
| TAGTGCCCCAACCTCTGCAA+TGG | 0.580807 | 3_3:+7078008 | Msa0440230:CDS |
| TTTCGATATGCATGACATGT+TGG | 0.582133 | 3_3:+7081236 | Msa0440230:CDS |
| CCTCATCGTCATCGTCATCA+GGG | 0.582725 | 3_3:-7081491 | None:intergenic |
| TCGAATGGCTGCTATGCAAG+AGG | 0.583412 | 3_3:+7081530 | Msa0440230:CDS |
| AAGATGATGCTTGAGAAGCT+CGG | 0.587317 | 3_3:-7077495 | None:intergenic |
| AGAGGCCATGGCTCTTGGGA+TGG | 0.587677 | 3_3:+7081458 | Msa0440230:CDS |
| GGTCTTGTGCTTATGGTAGT+CGG | 0.588927 | 3_3:+7077455 | Msa0440230:CDS |
| TTGGGTTCCGAAGGTTACAA+AGG | 0.589756 | 3_3:+7077579 | Msa0440230:CDS |
| ACACCACGCTTGTCAGGTGA+AGG | 0.590498 | 3_3:-7077604 | None:intergenic |
| GGTGGATGTTCTCGTATTCA+CGG | 0.596225 | 3_3:+7077739 | Msa0440230:CDS |
| AGCATCCATCCCAAGAGCCA+TGG | 0.600499 | 3_3:-7081463 | None:intergenic |
| ATCATCTATCCCAGAAACCA+TGG | 0.600753 | 3_3:-7081553 | None:intergenic |
| TGAATACGAGAACATCCACC+GGG | 0.602886 | 3_3:-7077736 | None:intergenic |
| ACTTTAGCACTACGAGCCAC+AGG | 0.603612 | 3_3:-7077547 | None:intergenic |
| TTATCAGATTCGCTGGCTGG+CGG | 0.606192 | 3_3:+7081357 | Msa0440230:CDS |
| GCTGCTGCCAACTGCCCCGG+TGG | 0.606750 | 3_3:+7077721 | Msa0440230:CDS |
| TGAAGCCTGGCTCATACACA+TGG | 0.611090 | 3_3:+7081175 | Msa0440230:CDS |
| AAATGGAAATTGTCCATTTG+GGG | 0.614806 | 3_3:+7078303 | Msa0440230:CDS |
| GATGTCGGTGAATCCAGTAC+TGG | 0.616230 | 3_3:+7077661 | Msa0440230:CDS |
| ATAACTACAAGGCAAACTGC+AGG | 0.617185 | 3_3:+7078148 | Msa0440230:CDS |
| CATGACATGTTGGATGTGCT+CGG | 0.619477 | 3_3:+7081246 | Msa0440230:CDS |
| GTAGTAAACCAAATACCACT+TGG | 0.621876 | 3_3:-7078099 | None:intergenic |
| GGAAATTATTGATAACTACA+AGG | 0.622897 | 3_3:+7078137 | Msa0440230:CDS |
| GAATCAAAAGGACCCAAACA+AGG | 0.628395 | 3_3:-7081387 | None:intergenic |
| CATCAGGACTGTACCGATGT+CGG | 0.630976 | 3_3:+7077646 | Msa0440230:CDS |
| AGTACTGGATTCACCGACAT+CGG | 0.632271 | 3_3:-7077659 | None:intergenic |
| GTGAATACGAGAACATCCAC+CGG | 0.635675 | 3_3:-7077737 | None:intergenic |
| GGTGAGGTTGATCTATCAAG+TGG | 0.638628 | 3_3:+7081267 | Msa0440230:CDS |
| ACTACCGATTTCCATTGCAG+AGG | 0.647818 | 3_3:-7078019 | None:intergenic |
| TGAGATTTACCTGTTGGACA+TGG | 0.648362 | 3_3:-7076484 | None:intergenic |
| CATACACATGGAGACACCGC+AGG | 0.651112 | 3_3:+7081187 | Msa0440230:CDS |
| CAATTCCATGAAAATCATCA+GGG | 0.655793 | 3_3:-7081581 | None:intergenic |
| GTTCCTTCACCTGACAAGCG+TGG | 0.673427 | 3_3:+7077601 | Msa0440230:CDS |
| CCCTGATGACGATGACGATG+AGG | 0.676584 | 3_3:+7081491 | Msa0440230:CDS |
| AGAAGAAGATGAAGATTACG+AGG | 0.692698 | 3_3:+7081659 | Msa0440230:CDS |
| CATGTTGGATGTGCTCGGTG+AGG | 0.698239 | 3_3:+7081251 | Msa0440230:CDS |
| GAATACGAGAACATCCACCG+GGG | 0.861616 | 3_3:-7077735 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAAAAATTTAATTAAA+AGG | + | chr3_3:7080937-7080956 | Msa0440230:intron | 0.0% |
| !! | TTATAAAAATTTAATTAAAA+GGG | + | chr3_3:7080938-7080957 | Msa0440230:intron | 0.0% |
| !!! | TTTAGGTTAATTTAATTTTA+GGG | + | chr3_3:7076806-7076825 | Msa0440230:intron | 10.0% |
| !!! | ATTTTTGAAATTTAACTTTT+AGG | + | chr3_3:7076854-7076873 | Msa0440230:intron | 10.0% |
| !!! | TTTTTGAAATTTAACTTTTA+GGG | + | chr3_3:7076855-7076874 | Msa0440230:intron | 10.0% |
| !! | AACAACATAAATAATCAAAT+GGG | - | chr3_3:7076632-7076651 | None:intergenic | 15.0% |
| !! | TAACAACATAAATAATCAAA+TGG | - | chr3_3:7076633-7076652 | None:intergenic | 15.0% |
| !!! | GTTTAGGTTAATTTAATTTT+AGG | + | chr3_3:7076805-7076824 | Msa0440230:intron | 15.0% |
| !!! | TCAAACATATTTTCAAAAAT+GGG | - | chr3_3:7079338-7079357 | None:intergenic | 15.0% |
| !!! | ATCAAACATATTTTCAAAAA+TGG | - | chr3_3:7079339-7079358 | None:intergenic | 15.0% |
| !!! | GTATTATTTTAATCTGAAAT+TGG | - | chr3_3:7080016-7080035 | None:intergenic | 15.0% |
| !! | ATTTCAGATTAAAATAATAC+TGG | + | chr3_3:7080016-7080035 | Msa0440230:intron | 15.0% |
| !!! | TTTTAGAAAAAAATTACCAA+GGG | - | chr3_3:7080912-7080931 | None:intergenic | 15.0% |
| !! | TCTCAAAAACTAATATAAAA+TGG | - | chr3_3:7081099-7081118 | None:intergenic | 15.0% |
| !!! | TTTTATATTAGTTTTTGAGA+TGG | + | chr3_3:7081099-7081118 | Msa0440230:intron | 15.0% |
| !!! | TTGTATGATTTTTGCAATTT+AGG | + | chr3_3:7076583-7076602 | Msa0440230:intron | 20.0% |
| !! | AAGTACATCATACAAAAAAA+AGG | - | chr3_3:7076967-7076986 | None:intergenic | 20.0% |
| !!! | AGTAATTGAAGATTATTTCT+TGG | + | chr3_3:7077015-7077034 | Msa0440230:intron | 20.0% |
| !! | TTAAATCTATGAATTGTTTC+AGG | + | chr3_3:7077074-7077093 | Msa0440230:intron | 20.0% |
| !! | TAAATCTATGAATTGTTTCA+GGG | + | chr3_3:7077075-7077094 | Msa0440230:intron | 20.0% |
| !! | TGTATTTATATTGTTCTTAC+TGG | + | chr3_3:7077390-7077409 | Msa0440230:intron | 20.0% |
| !!! | TTACAAAACAAATTTTCATG+TGG | - | chr3_3:7077697-7077716 | None:intergenic | 20.0% |
| !! | ATCTGAAAGAGAAAAAAAAT+AGG | - | chr3_3:7078255-7078274 | None:intergenic | 20.0% |
| !! | AAATATAAAAGAAAGAGAGA+TGG | - | chr3_3:7078349-7078368 | None:intergenic | 20.0% |
| !!! | TCTTTCTTTTATATTTTCCT+TGG | + | chr3_3:7078353-7078372 | Msa0440230:intron | 20.0% |
| !! | TATTTCTTATTCTTAGAAGT+AGG | + | chr3_3:7078616-7078635 | Msa0440230:intron | 20.0% |
| !!! | CTTTAATTTAGAATATGGAT+TGG | + | chr3_3:7078660-7078679 | Msa0440230:intron | 20.0% |
| !!! | CAAGTTCTTTTACAAATTTT+AGG | - | chr3_3:7078832-7078851 | None:intergenic | 20.0% |
| !!! | AGTTTACATTTTTTTCTTAC+AGG | + | chr3_3:7078881-7078900 | Msa0440230:intron | 20.0% |
| !!! | GTTTACATTTTTTTCTTACA+GGG | + | chr3_3:7078882-7078901 | Msa0440230:intron | 20.0% |
| !!! | TTTACATTTTTTTCTTACAG+GGG | + | chr3_3:7078883-7078902 | Msa0440230:intron | 20.0% |
| !! | ATATAATACATATGTGTGTA+CGG | - | chr3_3:7078947-7078966 | None:intergenic | 20.0% |
| !! | TATTACTACTTGTCTTTAAT+TGG | + | chr3_3:7079067-7079086 | Msa0440230:intron | 20.0% |
| !! | AATCTCATCTAAAAAACTAA+AGG | + | chr3_3:7079740-7079759 | Msa0440230:intron | 20.0% |
| !! | TTACTAGCATAATACATTAT+TGG | + | chr3_3:7079962-7079981 | Msa0440230:intron | 20.0% |
| !! | ATTAAAATAATACTGGTAGT+GGG | + | chr3_3:7080023-7080042 | Msa0440230:intron | 20.0% |
| !!! | AGCACATATATTTTTTCAAA+GGG | + | chr3_3:7080306-7080325 | Msa0440230:intron | 20.0% |
| !!! | ATATTTCTAAACTATCTTGT+TGG | - | chr3_3:7080636-7080655 | None:intergenic | 20.0% |
| !!! | GTTTTAGAAAAAAATTACCA+AGG | - | chr3_3:7080913-7080932 | None:intergenic | 20.0% |
| !! | CCTAAAATACTATGAAATAT+CGG | + | chr3_3:7081008-7081027 | Msa0440230:intron | 20.0% |
| !! | CTAAAATACTATGAAATATC+GGG | + | chr3_3:7081009-7081028 | Msa0440230:intron | 20.0% |
| !! | GTAAATGTAAATATTGTCTT+TGG | + | chr3_3:7081061-7081080 | Msa0440230:intron | 20.0% |
| !! | TAATATAAAATGGATATGCA+AGG | - | chr3_3:7081089-7081108 | None:intergenic | 20.0% |
| !! | TGATGAATATTAGATTTACT+TGG | + | chr3_3:7081701-7081720 | Msa0440230:exon | 20.0% |
| !!! | TCAAAAACTGTTTAAAACTA+GGG | - | chr3_3:7081738-7081757 | None:intergenic | 20.0% |
| !!! | TTCAAAAACTGTTTAAAACT+AGG | - | chr3_3:7081739-7081758 | None:intergenic | 20.0% |
| !!! | CTTTTCTTATGAAAATCATT+TGG | + | chr3_3:7081788-7081807 | Msa0440230:three_prime_UTR | 20.0% |
| !! | TTTGCAATTTAGGTTTCAAA+AGG | + | chr3_3:7076593-7076612 | Msa0440230:intron | 25.0% |
| !! | TTGCAATTTAGGTTTCAAAA+GGG | + | chr3_3:7076594-7076613 | Msa0440230:intron | 25.0% |
| !!! | GATTGTTTTAAGCTATTTTC+TGG | + | chr3_3:7076705-7076724 | Msa0440230:intron | 25.0% |
| !! | AATCAGTTCTTTTTCTGTTT+AGG | + | chr3_3:7076789-7076808 | Msa0440230:intron | 25.0% |
| ! | ATACAAAGTAGAAAACACAT+TGG | - | chr3_3:7077375-7077394 | None:intergenic | 25.0% |
| ! | ATTTGCTCTTATTATCAGAA+AGG | + | chr3_3:7077433-7077452 | Msa0440230:CDS | 25.0% |
| ! | TTTGCTCTTATTATCAGAAA+GGG | + | chr3_3:7077434-7077453 | Msa0440230:CDS | 25.0% |
| ! | TGACAAAATATGATAGTTTG+CGG | - | chr3_3:7078077-7078096 | None:intergenic | 25.0% |
| !! | GGAAATTATTGATAACTACA+AGG | + | chr3_3:7078137-7078156 | Msa0440230:CDS | 25.0% |
| ! | AATTATTAAGCGTGAATGTT+TGG | + | chr3_3:7078209-7078228 | Msa0440230:intron | 25.0% |
| ! | AATTTATATGGCTATATGGA+TGG | - | chr3_3:7078491-7078510 | None:intergenic | 25.0% |
| ! | GGATAATTTATATGGCTATA+TGG | - | chr3_3:7078495-7078514 | None:intergenic | 25.0% |
| ! | ATTGGCATTTATTGAAAGAA+AGG | - | chr3_3:7078736-7078755 | None:intergenic | 25.0% |
| ! | CAAATTTCAACATTCTGTAT+TGG | - | chr3_3:7078754-7078773 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGTCTCATGTAGT+AGG | + | chr3_3:7079000-7079019 | Msa0440230:intron | 25.0% |
| ! | GATCTATAGATCTAGTAAAA+TGG | - | chr3_3:7079142-7079161 | None:intergenic | 25.0% |
| ! | ATGCTGTGGAAATTAAATAT+GGG | - | chr3_3:7079170-7079189 | None:intergenic | 25.0% |
| !! | AGATTGAAGAAACTATTTCT+AGG | - | chr3_3:7079247-7079266 | None:intergenic | 25.0% |
| ! | AGAAATAGTTTCTTCAATCT+TGG | + | chr3_3:7079247-7079266 | Msa0440230:intron | 25.0% |
| ! | ACTAGTATTTAGTGGTTTAT+AGG | - | chr3_3:7079396-7079415 | None:intergenic | 25.0% |
| ! | ATTGATCAACTAGTATTTAG+TGG | - | chr3_3:7079404-7079423 | None:intergenic | 25.0% |
| ! | AAATACTAGTTGATCAATAG+AGG | + | chr3_3:7079406-7079425 | Msa0440230:intron | 25.0% |
| ! | AATACTAGTTGATCAATAGA+GGG | + | chr3_3:7079407-7079426 | Msa0440230:intron | 25.0% |
| ! | ATCACGAATATAAACCATAT+TGG | - | chr3_3:7079469-7079488 | None:intergenic | 25.0% |
| !! | TGATTTGGACATTGTAAATA+TGG | - | chr3_3:7079626-7079645 | None:intergenic | 25.0% |
| !!! | GATAATTTTGATGGTTTCTT+TGG | - | chr3_3:7079819-7079838 | None:intergenic | 25.0% |
| ! | ACCATCAAAATTATCTTCAA+AGG | + | chr3_3:7079824-7079843 | Msa0440230:intron | 25.0% |
| !!! | TCCTTTGAAGATAATTTTGA+TGG | - | chr3_3:7079828-7079847 | None:intergenic | 25.0% |
| ! | TATTATGCTAGTAACCTATA+GGG | - | chr3_3:7079956-7079975 | None:intergenic | 25.0% |
| ! | ATACATTATTGGAATAATGC+TGG | + | chr3_3:7079973-7079992 | Msa0440230:intron | 25.0% |
| ! | GATTAAAATAATACTGGTAG+TGG | + | chr3_3:7080022-7080041 | Msa0440230:intron | 25.0% |
| !!! | GAGCACATATATTTTTTCAA+AGG | + | chr3_3:7080305-7080324 | Msa0440230:intron | 25.0% |
| !! | TGTTTATTACGTAGTGTTTT+TGG | + | chr3_3:7080590-7080609 | Msa0440230:intron | 25.0% |
| !! | TACAAAGTTATGATTTTGTC+AGG | - | chr3_3:7080796-7080815 | None:intergenic | 25.0% |
| ! | TTAAAAGGGGAAAACAAATT+AGG | + | chr3_3:7080952-7080971 | Msa0440230:intron | 25.0% |
| !! | CCGATATTTCATAGTATTTT+AGG | - | chr3_3:7081011-7081030 | None:intergenic | 25.0% |
| !! | AGAATTTTATTCCATCATGA+GGG | + | chr3_3:7081290-7081309 | Msa0440230:CDS | 25.0% |
| !!! | AGAGTTTAATGTTTTTCGAA+TGG | + | chr3_3:7081515-7081534 | Msa0440230:CDS | 25.0% |
| !! | TGATTTTCATAAGAAAAGAG+AGG | - | chr3_3:7081786-7081805 | None:intergenic | 25.0% |
| GAAAAACGATCGAAGAAAAA+AGG | - | chr3_3:7076514-7076533 | None:intergenic | 30.0% | |
| ! | TGCAATTTAGGTTTCAAAAG+GGG | + | chr3_3:7076595-7076614 | Msa0440230:intron | 30.0% |
| TCTGATGAGAAAAATCACAT+TGG | - | chr3_3:7077141-7077160 | None:intergenic | 30.0% | |
| ! | TGATTTTTCTCATCAGAGAA+AGG | + | chr3_3:7077144-7077163 | Msa0440230:CDS | 30.0% |
| TATCACTAATGTTGATGTGT+CGG | + | chr3_3:7077309-7077328 | Msa0440230:intron | 30.0% | |
| TGCTAAAGTAGCATCAAATT+GGG | + | chr3_3:7077561-7077580 | Msa0440230:CDS | 30.0% | |
| TCCTACTGATAAAAAGGAAA+AGG | + | chr3_3:7077798-7077817 | Msa0440230:CDS | 30.0% | |
| ! | TCCTTTTCCTTTTTATCAGT+AGG | - | chr3_3:7077802-7077821 | None:intergenic | 30.0% |
| AGGAAAAGGAAAATCATTTG+AGG | + | chr3_3:7077812-7077831 | Msa0440230:CDS | 30.0% | |
| ! | TCATATTTTGTCATTCCAAG+TGG | + | chr3_3:7078084-7078103 | Msa0440230:CDS | 30.0% |
| ! | TGGTATTTGGTTTACTACAA+AGG | + | chr3_3:7078104-7078123 | Msa0440230:CDS | 30.0% |
| TACTACAAAGGAAGAAAAAC+AGG | + | chr3_3:7078116-7078135 | Msa0440230:CDS | 30.0% | |
| !!! | GATTGTAAACATTTTGACTC+TGG | + | chr3_3:7078280-7078299 | Msa0440230:CDS | 30.0% |
| !!! | AAACATTTTGACTCTGGAAA+TGG | + | chr3_3:7078286-7078305 | Msa0440230:CDS | 30.0% |
| GAAATGGAAATTGTCCATTT+GGG | + | chr3_3:7078302-7078321 | Msa0440230:CDS | 30.0% | |
| AAATGGAAATTGTCCATTTG+GGG | + | chr3_3:7078303-7078322 | Msa0440230:CDS | 30.0% | |
| AGAACTAATCCAACAAAGAA+AGG | - | chr3_3:7078462-7078481 | None:intergenic | 30.0% | |
| AACAACATCTACAAGGATTT+GGG | - | chr3_3:7078524-7078543 | None:intergenic | 30.0% | |
| ATAAGTCAACAACATCTACA+AGG | - | chr3_3:7078531-7078550 | None:intergenic | 30.0% | |
| ! | TAGGTTTCTTTCCCTTTTAT+GGG | + | chr3_3:7078635-7078654 | Msa0440230:intron | 30.0% |
| AAATTAAAGCCCCCATAAAA+GGG | - | chr3_3:7078649-7078668 | None:intergenic | 30.0% | |
| TAAATTAAAGCCCCCATAAA+AGG | - | chr3_3:7078650-7078669 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTCTTACAGGGGAT+GGG | + | chr3_3:7078888-7078907 | Msa0440230:intron | 30.0% |
| TGCTGTGGAAATTAAATATG+GGG | - | chr3_3:7079169-7079188 | None:intergenic | 30.0% | |
| GATGCTGTGGAAATTAAATA+TGG | - | chr3_3:7079171-7079190 | None:intergenic | 30.0% | |
| TTCAAAAGCTCAAACAGATT+GGG | - | chr3_3:7079222-7079241 | None:intergenic | 30.0% | |
| ATTCAAAAGCTCAAACAGAT+TGG | - | chr3_3:7079223-7079242 | None:intergenic | 30.0% | |
| ATAGTTTCTTCAATCTTGGT+TGG | + | chr3_3:7079251-7079270 | Msa0440230:intron | 30.0% | |
| TAGTGGTTTATAGGAGTAAT+GGG | - | chr3_3:7079387-7079406 | None:intergenic | 30.0% | |
| TTAGTGGTTTATAGGAGTAA+TGG | - | chr3_3:7079388-7079407 | None:intergenic | 30.0% | |
| TAGAGGGAAAATGAGTTTAA+AGG | + | chr3_3:7079423-7079442 | Msa0440230:intron | 30.0% | |
| TTACTACACATTGGAATACA+TGG | - | chr3_3:7079559-7079578 | None:intergenic | 30.0% | |
| TATTCCAATGTGTAGTAACT+AGG | + | chr3_3:7079561-7079580 | Msa0440230:intron | 30.0% | |
| ! | CTTAATCCTAATCACTGATT+TGG | - | chr3_3:7079641-7079660 | None:intergenic | 30.0% |
| CAAATCAGTGATTAGGATTA+AGG | + | chr3_3:7079639-7079658 | Msa0440230:intron | 30.0% | |
| ATGATAGAATGTTGTGTAAG+TGG | - | chr3_3:7079718-7079737 | None:intergenic | 30.0% | |
| ! | TTGATGGTTTCTTTGGATTT+GGG | - | chr3_3:7079812-7079831 | None:intergenic | 30.0% |
| ! | TTTGATGGTTTCTTTGGATT+TGG | - | chr3_3:7079813-7079832 | None:intergenic | 30.0% |
| ! | AGTCAGCCATAAAATTTTGT+AGG | + | chr3_3:7079894-7079913 | Msa0440230:intron | 30.0% |
| !! | ACAAATTTTGGGTGACTATA+GGG | - | chr3_3:7079925-7079944 | None:intergenic | 30.0% |
| !! | TACAAATTTTGGGTGACTAT+AGG | - | chr3_3:7079926-7079945 | None:intergenic | 30.0% |
| TATAGTCACCCAAAATTTGT+AGG | + | chr3_3:7079925-7079944 | Msa0440230:intron | 30.0% | |
| GTATTATGCTAGTAACCTAT+AGG | - | chr3_3:7079957-7079976 | None:intergenic | 30.0% | |
| ATTACCGTTTAGTATTGTAG+TGG | + | chr3_3:7080077-7080096 | Msa0440230:intron | 30.0% | |
| CTAACCACTACAATACTAAA+CGG | - | chr3_3:7080084-7080103 | None:intergenic | 30.0% | |
| TTAGGTTATGGTAGTTTCTA+GGG | + | chr3_3:7080100-7080119 | Msa0440230:intron | 30.0% | |
| !!! | AAGGAGTTTTAAGAAGTTCA+AGG | - | chr3_3:7080132-7080151 | None:intergenic | 30.0% |
| !! | GCAATTTGTTAATCTGAATG+TGG | - | chr3_3:7080243-7080262 | None:intergenic | 30.0% |
| !!! | ATTTTTTCAAAGGGTGAGTA+TGG | + | chr3_3:7080315-7080334 | Msa0440230:intron | 30.0% |
| TGGAAACAAGTACTATCATA+TGG | + | chr3_3:7080335-7080354 | Msa0440230:intron | 30.0% | |
| AACAGAAAAAAGACCAAAGA+GGG | + | chr3_3:7080405-7080424 | Msa0440230:intron | 30.0% | |
| CACTACGTAATAAACACAAT+AGG | - | chr3_3:7080586-7080605 | None:intergenic | 30.0% | |
| ! | AAAGTTATGATTTTGTCAGG+TGG | - | chr3_3:7080793-7080812 | None:intergenic | 30.0% |
| ! | ACTTTTGAACATAGACACTA+AGG | - | chr3_3:7080978-7080997 | None:intergenic | 30.0% |
| ! | GAGAATTTTATTCCATCATG+AGG | + | chr3_3:7081289-7081308 | Msa0440230:CDS | 30.0% |
| CAATTCCATGAAAATCATCA+GGG | - | chr3_3:7081584-7081603 | None:intergenic | 30.0% | |
| TCAATTCCATGAAAATCATC+AGG | - | chr3_3:7081585-7081604 | None:intergenic | 30.0% | |
| ! | TTTTCATGGAATTGATCCTA+TGG | + | chr3_3:7081590-7081609 | Msa0440230:CDS | 30.0% |
| ! | AATGATGATGCATTCTCATA+TGG | + | chr3_3:7081629-7081648 | Msa0440230:CDS | 30.0% |
| TCTTATGAAAATCATTTGGC+AGG | + | chr3_3:7081792-7081811 | Msa0440230:three_prime_UTR | 30.0% | |
| !!! | AGATCATATGCCATTTTTGA+AGG | + | chr3_3:7081851-7081870 | Msa0440230:three_prime_UTR | 30.0% |
| TAAGCCAAAACTCCTTAAAA+TGG | - | chr3_3:7081885-7081904 | None:intergenic | 30.0% | |
| !!! | TTTTAAGGAGTTTTGGCTTA+AGG | + | chr3_3:7081885-7081904 | Msa0440230:three_prime_UTR | 30.0% |
| !!! | TTTAAGGAGTTTTGGCTTAA+GGG | + | chr3_3:7081886-7081905 | Msa0440230:three_prime_UTR | 30.0% |
| ! | ATCTTTCCATAGGGTATTAT+GGG | - | chr3_3:7081960-7081979 | None:intergenic | 30.0% |
| ! | AATCTTTCCATAGGGTATTA+TGG | - | chr3_3:7081961-7081980 | None:intergenic | 30.0% |
| ATAATACCCTATGGAAAGAT+TGG | + | chr3_3:7081960-7081979 | Msa0440230:three_prime_UTR | 30.0% | |
| GATGCTACTAAACTTTAACT+AGG | - | chr3_3:7081997-7082016 | None:intergenic | 30.0% | |
| !! | ACATGGTGAGATTTTAGGAA+CGG | - | chr3_3:7076470-7076489 | None:intergenic | 35.0% |
| CATTGGTCAGTAACAGTAAA+TGG | - | chr3_3:7077203-7077222 | None:intergenic | 35.0% | |
| !! | ATCGGTGCTACAAAATACAT+TGG | - | chr3_3:7077220-7077239 | None:intergenic | 35.0% |
| CAAAGTAGAAAACACATTGG+CGG | - | chr3_3:7077372-7077391 | None:intergenic | 35.0% | |
| GTGCTAAAGTAGCATCAAAT+TGG | + | chr3_3:7077560-7077579 | Msa0440230:CDS | 35.0% | |
| TTTGAGGACTTGTGACAAAA+AGG | + | chr3_3:7077828-7077847 | Msa0440230:CDS | 35.0% | |
| !! | CAAAAAGGAAAAGTACCTTC+TGG | + | chr3_3:7077843-7077862 | Msa0440230:CDS | 35.0% |
| AACTTACATTCTGATGGCTT+GGG | - | chr3_3:7077928-7077947 | None:intergenic | 35.0% | |
| AAACTTACATTCTGATGGCT+TGG | - | chr3_3:7077929-7077948 | None:intergenic | 35.0% | |
| AAGCCATCAGAATGTAAGTT+TGG | + | chr3_3:7077928-7077947 | Msa0440230:CDS | 35.0% | |
| AGCCATCAGAATGTAAGTTT+GGG | + | chr3_3:7077929-7077948 | Msa0440230:CDS | 35.0% | |
| AACCCAAACTTACATTCTGA+TGG | - | chr3_3:7077934-7077953 | None:intergenic | 35.0% | |
| GTTTGTCATGTATTCGCAAT+TGG | + | chr3_3:7077980-7077999 | Msa0440230:CDS | 35.0% | |
| TTGTCATTCCAAGTGGTATT+TGG | + | chr3_3:7078091-7078110 | Msa0440230:CDS | 35.0% | |
| GTAGTAAACCAAATACCACT+TGG | - | chr3_3:7078102-7078121 | None:intergenic | 35.0% | |
| ATTCTTGCAAGCATACACAA+CGG | - | chr3_3:7078192-7078211 | None:intergenic | 35.0% | |
| GGAAATGGAAATTGTCCATT+TGG | + | chr3_3:7078301-7078320 | Msa0440230:CDS | 35.0% | |
| ATGATAATCAAGCTTGACCA+AGG | - | chr3_3:7078373-7078392 | None:intergenic | 35.0% | |
| CAACAAAGAAAGGAAAAGCA+TGG | - | chr3_3:7078452-7078471 | None:intergenic | 35.0% | |
| ! | CATGCTTTTCCTTTCTTTGT+TGG | + | chr3_3:7078450-7078469 | Msa0440230:intron | 35.0% |
| GGGAGAACGGATAATTTATA+TGG | - | chr3_3:7078503-7078522 | None:intergenic | 35.0% | |
| ACAACATCTACAAGGATTTG+GGG | - | chr3_3:7078523-7078542 | None:intergenic | 35.0% | |
| CAACAACATCTACAAGGATT+TGG | - | chr3_3:7078525-7078544 | None:intergenic | 35.0% | |
| GATTATTTAATCCAGATGCG+TGG | - | chr3_3:7078563-7078582 | None:intergenic | 35.0% | |
| ! | GTAGGTTTCTTTCCCTTTTA+TGG | + | chr3_3:7078634-7078653 | Msa0440230:intron | 35.0% |
| ! | AGGTTTCTTTCCCTTTTATG+GGG | + | chr3_3:7078636-7078655 | Msa0440230:intron | 35.0% |
| ! | GGGGGCTTTAATTTAGAATA+TGG | + | chr3_3:7078655-7078674 | Msa0440230:intron | 35.0% |
| GTGAATATCTTTCACCTCAT+AGG | + | chr3_3:7078776-7078795 | Msa0440230:intron | 35.0% | |
| !!! | CATTTTTTTCTTACAGGGGA+TGG | + | chr3_3:7078887-7078906 | Msa0440230:intron | 35.0% |
| ! | GTGAATGATTGTTGTTCAGT+TGG | - | chr3_3:7078925-7078944 | None:intergenic | 35.0% |
| TGAAACTACTTGGAAGATCT+TGG | - | chr3_3:7079104-7079123 | None:intergenic | 35.0% | |
| GTAAAATGGTGAATGTGTCA+AGG | - | chr3_3:7079128-7079147 | None:intergenic | 35.0% | |
| AGATGAAATAAGAGATGCTG+TGG | - | chr3_3:7079184-7079203 | None:intergenic | 35.0% | |
| TTGCGTTAACACAACCAATA+TGG | + | chr3_3:7079452-7079471 | Msa0440230:intron | 35.0% | |
| GAAAGTAGGGAATGTAATTG+AGG | - | chr3_3:7079530-7079549 | None:intergenic | 35.0% | |
| TACATGGAGCATAGAAAGTA+GGG | - | chr3_3:7079543-7079562 | None:intergenic | 35.0% | |
| ATACATGGAGCATAGAAAGT+AGG | - | chr3_3:7079544-7079563 | None:intergenic | 35.0% | |
| TTCTCCTAGTTACTACACAT+TGG | - | chr3_3:7079568-7079587 | None:intergenic | 35.0% | |
| CAATGTCCAAATCAGTGATT+AGG | + | chr3_3:7079632-7079651 | Msa0440230:intron | 35.0% | |
| GAATGTTGTGTAAGTGGTAA+AGG | - | chr3_3:7079712-7079731 | None:intergenic | 35.0% | |
| ! | TTAAGCTTTTACCCACCATA+TGG | + | chr3_3:7079848-7079867 | Msa0440230:intron | 35.0% |
| ! | TAAGCTTTTACCCACCATAT+GGG | + | chr3_3:7079849-7079868 | Msa0440230:intron | 35.0% |
| !! | GTCTACTAGACTTGTTAATG+AGG | + | chr3_3:7079871-7079890 | Msa0440230:intron | 35.0% |
| ! | GCCATAAAATTTTGTAGGCA+TGG | + | chr3_3:7079899-7079918 | Msa0440230:intron | 35.0% |
| ! | GCCATGCCTACAAAATTTTA+TGG | - | chr3_3:7079903-7079922 | None:intergenic | 35.0% |
| TCACCCAAAATTTGTAGGTA+TGG | + | chr3_3:7079930-7079949 | Msa0440230:intron | 35.0% | |
| CGTTTAGTATTGTAGTGGTT+AGG | + | chr3_3:7080082-7080101 | Msa0440230:intron | 35.0% | |
| GTATTGTAGTGGTTAGGTTA+TGG | + | chr3_3:7080088-7080107 | Msa0440230:intron | 35.0% | |
| GTTAGGTTATGGTAGTTTCT+AGG | + | chr3_3:7080099-7080118 | Msa0440230:intron | 35.0% | |
| !!! | GACACTCTTGTTTTTCCATT+TGG | + | chr3_3:7080194-7080213 | Msa0440230:intron | 35.0% |
| GATGTATTCGTTTGACCAAA+TGG | - | chr3_3:7080212-7080231 | None:intergenic | 35.0% | |
| TGAAGTGAAGACAATAGGAA+GGG | - | chr3_3:7080378-7080397 | None:intergenic | 35.0% | |
| ATGAAGTGAAGACAATAGGA+AGG | - | chr3_3:7080379-7080398 | None:intergenic | 35.0% | |
| TGTCATGAAGTGAAGACAAT+AGG | - | chr3_3:7080383-7080402 | None:intergenic | 35.0% | |
| GAACAGAAAAAAGACCAAAG+AGG | + | chr3_3:7080404-7080423 | Msa0440230:intron | 35.0% | |
| ACAGAAAAAAGACCAAAGAG+GGG | + | chr3_3:7080406-7080425 | Msa0440230:intron | 35.0% | |
| ! | TTTTGTGATCCATGAGTTGT+TGG | + | chr3_3:7080450-7080469 | Msa0440230:intron | 35.0% |
| TTGGCTGAAAATGATACTAG+AGG | + | chr3_3:7080473-7080492 | Msa0440230:intron | 35.0% | |
| !!! | TACGTAGTGTTTTTGGTGAT+AGG | + | chr3_3:7080597-7080616 | Msa0440230:intron | 35.0% |
| !!! | ACGTAGTGTTTTTGGTGATA+GGG | + | chr3_3:7080598-7080617 | Msa0440230:intron | 35.0% |
| ACATGTCATGCATATCGAAA+TGG | - | chr3_3:7081236-7081255 | None:intergenic | 35.0% | |
| TTTCGATATGCATGACATGT+TGG | + | chr3_3:7081236-7081255 | Msa0440230:CDS | 35.0% | |
| !!! | AGGGACTCAGATTTTTTTGA+GGG | + | chr3_3:7081309-7081328 | Msa0440230:CDS | 35.0% |
| !!! | CTCAGATTTTTTTGAGGGAA+TGG | + | chr3_3:7081314-7081333 | Msa0440230:CDS | 35.0% |
| ! | AATGGATCCATTTGAGATGA+TGG | + | chr3_3:7081332-7081351 | Msa0440230:CDS | 35.0% |
| GATAATGCCATCATCTCAAA+TGG | - | chr3_3:7081342-7081361 | None:intergenic | 35.0% | |
| !!! | GTTTCTGGGATAGATGATTT+TGG | + | chr3_3:7081558-7081577 | Msa0440230:CDS | 35.0% |
| AGAAGAAGATGAAGATTACG+AGG | + | chr3_3:7081659-7081678 | Msa0440230:CDS | 35.0% | |
| AGGTGACACAACTTAGTTAA+AGG | - | chr3_3:7081766-7081785 | None:intergenic | 35.0% | |
| !!! | AAGGTCATGTTGCCATTTTA+AGG | + | chr3_3:7081870-7081889 | Msa0440230:three_prime_UTR | 35.0% |
| !!! | GTTGCCATTTTAAGGAGTTT+TGG | + | chr3_3:7081878-7081897 | Msa0440230:three_prime_UTR | 35.0% |
| !!! | TTGGCTTAAGGGTTTTGTTT+TGG | + | chr3_3:7081897-7081916 | Msa0440230:three_prime_UTR | 35.0% |
| !!! | GGGTTTTGTTTTGGATTTTG+TGG | + | chr3_3:7081906-7081925 | Msa0440230:three_prime_UTR | 35.0% |
| AACCAACCAATCTTTCCATA+GGG | - | chr3_3:7081969-7081988 | None:intergenic | 35.0% | |
| AAACCAACCAATCTTTCCAT+AGG | - | chr3_3:7081970-7081989 | None:intergenic | 35.0% | |
| ! | GTTGGACATGGTGAGATTTT+AGG | - | chr3_3:7076475-7076494 | None:intergenic | 40.0% |
| AAAATCTCACCATGTCCAAC+AGG | + | chr3_3:7076475-7076494 | Msa0440230:exon | 40.0% | |
| TGAGATTTACCTGTTGGACA+TGG | - | chr3_3:7076487-7076506 | None:intergenic | 40.0% | |
| !! | GGTTGATGAGATTTACCTGT+TGG | - | chr3_3:7076493-7076512 | None:intergenic | 40.0% |
| AAGATGATGCTTGAGAAGCT+CGG | - | chr3_3:7077498-7077517 | None:intergenic | 40.0% | |
| AGCATCATCTTCAGCATCTA+TGG | + | chr3_3:7077507-7077526 | Msa0440230:CDS | 40.0% | |
| GAAGGAACCTTTGTAACCTT+CGG | - | chr3_3:7077589-7077608 | None:intergenic | 40.0% | |
| ! | CCTTTTTATCAGTAGGATGC+AGG | - | chr3_3:7077795-7077814 | None:intergenic | 40.0% |
| CCTGCATCCTACTGATAAAA+AGG | + | chr3_3:7077792-7077811 | Msa0440230:CDS | 40.0% | |
| ! | ATGATAGTTTGCGGCAAACA+GGG | - | chr3_3:7078068-7078087 | None:intergenic | 40.0% |
| ! | TATGATAGTTTGCGGCAAAC+AGG | - | chr3_3:7078069-7078088 | None:intergenic | 40.0% |
| ATAACTACAAGGCAAACTGC+AGG | + | chr3_3:7078148-7078167 | Msa0440230:CDS | 40.0% | |
| ! | GGTTTCTTTCCCTTTTATGG+GGG | + | chr3_3:7078637-7078656 | Msa0440230:intron | 40.0% |
| CTCTACATCATCTTCCTATG+AGG | - | chr3_3:7078793-7078812 | None:intergenic | 40.0% | |
| CTCATAGGAAGATGATGTAG+AGG | + | chr3_3:7078791-7078810 | Msa0440230:intron | 40.0% | |
| ! | GTAGTAGGCAAGTGGTATTT+TGG | + | chr3_3:7079015-7079034 | Msa0440230:intron | 40.0% |
| !! | GCAAGTGGTATTTTGGACTT+TGG | + | chr3_3:7079022-7079041 | Msa0440230:intron | 40.0% |
| GTGTCAAGGATGAAACTACT+TGG | - | chr3_3:7079114-7079133 | None:intergenic | 40.0% | |
| ! | TGGTTTATAGGAGTAATGGG+CGG | - | chr3_3:7079384-7079403 | None:intergenic | 40.0% |
| CAATGCGTCATAACTCAAAG+AGG | - | chr3_3:7079769-7079788 | None:intergenic | 40.0% | |
| TGAGTTATGACGCATTGCAT+TGG | + | chr3_3:7079772-7079791 | Msa0440230:intron | 40.0% | |
| ACAAGTCTAGTAGACCCATA+TGG | - | chr3_3:7079866-7079885 | None:intergenic | 40.0% | |
| ! | GGGCCATACCTACAAATTTT+GGG | - | chr3_3:7079936-7079955 | None:intergenic | 40.0% |
| ! | AGGGCCATACCTACAAATTT+TGG | - | chr3_3:7079937-7079956 | None:intergenic | 40.0% |
| ATTTGTAGGTATGGCCCTAT+AGG | + | chr3_3:7079939-7079958 | Msa0440230:intron | 40.0% | |
| ACCAACTGAGCTACTTACTT+GGG | + | chr3_3:7080168-7080187 | Msa0440230:intron | 40.0% | |
| ! | ACACTTGTAGCTTTACACGT+TGG | - | chr3_3:7080272-7080291 | None:intergenic | 40.0% |
| AATAGGAAGGGTCTGGATAT+AGG | - | chr3_3:7080366-7080385 | None:intergenic | 40.0% | |
| !! | TAACACTGATTTCCCCTCTT+TGG | - | chr3_3:7080421-7080440 | None:intergenic | 40.0% |
| ACTCATTCTCAGATCACTCA+TGG | - | chr3_3:7080518-7080537 | None:intergenic | 40.0% | |
| AAGCATCAACAACAGTGTAG+GGG | - | chr3_3:7080686-7080705 | None:intergenic | 40.0% | |
| CAAGCATCAACAACAGTGTA+GGG | - | chr3_3:7080687-7080706 | None:intergenic | 40.0% | |
| ACAAGCATCAACAACAGTGT+AGG | - | chr3_3:7080688-7080707 | None:intergenic | 40.0% | |
| ! | GTTATGATTTTGTCAGGTGG+AGG | - | chr3_3:7080790-7080809 | None:intergenic | 40.0% |
| !! | GTTTCGGGTGGACTAAATAA+TGG | - | chr3_3:7080850-7080869 | None:intergenic | 40.0% |
| TGTTTAACTGCCCTGTGTTT+CGG | - | chr3_3:7080866-7080885 | None:intergenic | 40.0% | |
| !! | AACACCTCATGGACTAGATA+AGG | + | chr3_3:7080882-7080901 | Msa0440230:intron | 40.0% |
| !!! | AAATGGTTTTGTCTGCGTTG+AGG | - | chr3_3:7081219-7081238 | None:intergenic | 40.0% |
| AAAATCTGAGTCCCTCATGA+TGG | - | chr3_3:7081304-7081323 | None:intergenic | 40.0% | |
| !!! | GAGGGACTCAGATTTTTTTG+AGG | + | chr3_3:7081308-7081327 | Msa0440230:CDS | 40.0% |
| GAATCAAAAGGACCCAAACA+AGG | - | chr3_3:7081390-7081409 | None:intergenic | 40.0% | |
| TCAAATTGCTGCTATGCAAG+AGG | + | chr3_3:7081440-7081459 | Msa0440230:CDS | 40.0% | |
| ATCATCTATCCCAGAAACCA+TGG | - | chr3_3:7081556-7081575 | None:intergenic | 40.0% | |
| ! | TTTGGCCCTGATGATTTTCA+TGG | + | chr3_3:7081576-7081595 | Msa0440230:CDS | 40.0% |
| GATATCAAAGCTGCATCCAT+AGG | - | chr3_3:7081609-7081628 | None:intergenic | 40.0% | |
| GGCAACATGACCTTCAAAAA+TGG | - | chr3_3:7081864-7081883 | None:intergenic | 40.0% | |
| GTGAATCCCATAATACCCTA+TGG | + | chr3_3:7081951-7081970 | Msa0440230:three_prime_UTR | 40.0% | |
| TACCCTATGGAAAGATTGGT+TGG | + | chr3_3:7081964-7081983 | Msa0440230:three_prime_UTR | 40.0% | |
| !! | GTTTGCAAGTTTTATGCGCG+AGG | + | chr3_3:7077097-7077116 | Msa0440230:CDS | 45.0% |
| ! | GTGTCGGTGATTAGAGGTAT+CGG | - | chr3_3:7077238-7077257 | None:intergenic | 45.0% |
| GAGTCAATGTCGTGTTGTGT+CGG | - | chr3_3:7077254-7077273 | None:intergenic | 45.0% | |
| GTGAAACACTGACACCAGAT+AGG | - | chr3_3:7077350-7077369 | None:intergenic | 45.0% | |
| ! | CAGAAAGGGTCTTGTGCTTA+TGG | + | chr3_3:7077448-7077467 | Msa0440230:CDS | 45.0% |
| ! | GGTCTTGTGCTTATGGTAGT+CGG | + | chr3_3:7077455-7077474 | Msa0440230:CDS | 45.0% |
| AGCATCAAATTGGGTTCCGA+AGG | + | chr3_3:7077570-7077589 | Msa0440230:CDS | 45.0% | |
| TTGGGTTCCGAAGGTTACAA+AGG | + | chr3_3:7077579-7077598 | Msa0440230:CDS | 45.0% | |
| ! | AGTACTGGATTCACCGACAT+CGG | - | chr3_3:7077662-7077681 | None:intergenic | 45.0% |
| TGAATACGAGAACATCCACC+GGG | - | chr3_3:7077739-7077758 | None:intergenic | 45.0% | |
| GTGAATACGAGAACATCCAC+CGG | - | chr3_3:7077740-7077759 | None:intergenic | 45.0% | |
| GGTGGATGTTCTCGTATTCA+CGG | + | chr3_3:7077739-7077758 | Msa0440230:CDS | 45.0% | |
| !!! | CGCTGTTTTTCAAAGCCAGA+AGG | - | chr3_3:7077861-7077880 | None:intergenic | 45.0% |
| ! | CAGAAAGCGTGATCACATTC+TGG | - | chr3_3:7077961-7077980 | None:intergenic | 45.0% |
| GATTTCCATTGCAGAGGTTG+GGG | - | chr3_3:7078016-7078035 | None:intergenic | 45.0% | |
| CGATTTCCATTGCAGAGGTT+GGG | - | chr3_3:7078017-7078036 | None:intergenic | 45.0% | |
| CCAACCTCTGCAATGGAAAT+CGG | + | chr3_3:7078015-7078034 | Msa0440230:CDS | 45.0% | |
| !! | ACTACCGATTTCCATTGCAG+AGG | - | chr3_3:7078022-7078041 | None:intergenic | 45.0% |
| TAGAAACAGCTAGCCCCAAA+TGG | - | chr3_3:7078319-7078338 | None:intergenic | 45.0% | |
| CTACAAGGATTTGGGGAGAA+CGG | - | chr3_3:7078516-7078535 | None:intergenic | 45.0% | |
| GGACAAGTTGCTAAAGCTTG+TGG | - | chr3_3:7078715-7078734 | None:intergenic | 45.0% | |
| TGTCTCATGTAGTAGGCAAG+TGG | + | chr3_3:7079007-7079026 | Msa0440230:intron | 45.0% | |
| TTGGAAGATCTTGGAGACGA+TGG | - | chr3_3:7079095-7079114 | None:intergenic | 45.0% | |
| TGCAACATACACTAGCCAGT+AGG | - | chr3_3:7079279-7079298 | None:intergenic | 45.0% | |
| !! | TTATAGGAGTAATGGGCGGA+GGG | - | chr3_3:7079380-7079399 | None:intergenic | 45.0% |
| !! | TTTATAGGAGTAATGGGCGG+AGG | - | chr3_3:7079381-7079400 | None:intergenic | 45.0% |
| AGGACAATGCTAGCAACTAG+CGG | - | chr3_3:7079692-7079711 | None:intergenic | 45.0% | |
| GTCTAGTAGACCCATATGGT+GGG | - | chr3_3:7079862-7079881 | None:intergenic | 45.0% | |
| AGTCTAGTAGACCCATATGG+TGG | - | chr3_3:7079863-7079882 | None:intergenic | 45.0% | |
| TTGGAATAATGCTGGACTGC+TGG | + | chr3_3:7079981-7080000 | Msa0440230:intron | 45.0% | |
| !! | ATACTGGTAGTGGGTAAGAG+TGG | + | chr3_3:7080032-7080051 | Msa0440230:intron | 45.0% |
| ! | TAGTGGGTAAGAGTGGAAGT+AGG | + | chr3_3:7080039-7080058 | Msa0440230:intron | 45.0% |
| !! | TAGCTCAGTTGGTGAGCTAA+GGG | - | chr3_3:7080161-7080180 | None:intergenic | 45.0% |
| CACCAACTGAGCTACTTACT+TGG | + | chr3_3:7080167-7080186 | Msa0440230:intron | 45.0% | |
| TCCCAAGTAAGTAGCTCAGT+TGG | - | chr3_3:7080172-7080191 | None:intergenic | 45.0% | |
| TGAAGACAATAGGAAGGGTC+TGG | - | chr3_3:7080373-7080392 | None:intergenic | 45.0% | |
| GTGATCCATGAGTTGTTGGT+TGG | + | chr3_3:7080454-7080473 | Msa0440230:intron | 45.0% | |
| TTCAGCCAACCAACAACTCA+TGG | - | chr3_3:7080462-7080481 | None:intergenic | 45.0% | |
| GATACTAGAGGCTAGAGCTA+TGG | + | chr3_3:7080485-7080504 | Msa0440230:intron | 45.0% | |
| !!! | AGTGTTTTTGGTGATAGGGC+AGG | + | chr3_3:7080602-7080621 | Msa0440230:intron | 45.0% |
| ATCAACAACAGTGTAGGGGA+GGG | - | chr3_3:7080682-7080701 | None:intergenic | 45.0% | |
| !! | TGGAAGGTGTCTGGAAACAA+GGG | - | chr3_3:7080758-7080777 | None:intergenic | 45.0% |
| !! | ATGGAAGGTGTCTGGAAACA+AGG | - | chr3_3:7080759-7080778 | None:intergenic | 45.0% |
| ! | ATGATTTTGTCAGGTGGAGG+TGG | - | chr3_3:7080787-7080806 | None:intergenic | 45.0% |
| ATTTAGTCCACCCGAAACAC+AGG | + | chr3_3:7080852-7080871 | Msa0440230:intron | 45.0% | |
| TTTAGTCCACCCGAAACACA+GGG | + | chr3_3:7080853-7080872 | Msa0440230:intron | 45.0% | |
| GTTTAACTGCCCTGTGTTTC+GGG | - | chr3_3:7080865-7080884 | None:intergenic | 45.0% | |
| TGCTCCTTATCTAGTCCATG+AGG | - | chr3_3:7080889-7080908 | None:intergenic | 45.0% | |
| TTTCAGCATACAGTGAAGCC+TGG | + | chr3_3:7081162-7081181 | Msa0440230:intron | 45.0% | |
| CATGACATGTTGGATGTGCT+CGG | + | chr3_3:7081246-7081265 | Msa0440230:CDS | 45.0% | |
| ! | GGTGAGGTTGATCTATCAAG+TGG | + | chr3_3:7081267-7081286 | Msa0440230:CDS | 45.0% |
| GATGGCATTATCAGATTCGC+TGG | + | chr3_3:7081350-7081369 | Msa0440230:CDS | 45.0% | |
| !! | TATAAAAATTTAATTAAAAG+GGG | + | chr3_3:7080939-7080958 | Msa0440230:intron | 5.0% |
| ! | CGTGTTGTGTCGGTGATTAG+AGG | - | chr3_3:7077244-7077263 | None:intergenic | 50.0% |
| GTCGTTGTCAGTGTCCTATC+TGG | + | chr3_3:7077333-7077352 | Msa0440230:intron | 50.0% | |
| ACTTTAGCACTACGAGCCAC+AGG | - | chr3_3:7077550-7077569 | None:intergenic | 50.0% | |
| ACCTGACAAGCGTGGTGTAA+AGG | + | chr3_3:7077609-7077628 | Msa0440230:CDS | 50.0% | |
| CCTGACAAGCGTGGTGTAAA+GGG | + | chr3_3:7077610-7077629 | Msa0440230:CDS | 50.0% | |
| GGGTTTACAACGCAAGCATC+AGG | + | chr3_3:7077630-7077649 | Msa0440230:CDS | 50.0% | |
| ! | CATCAGGACTGTACCGATGT+CGG | + | chr3_3:7077646-7077665 | Msa0440230:CDS | 50.0% |
| GATGTCGGTGAATCCAGTAC+TGG | + | chr3_3:7077661-7077680 | Msa0440230:CDS | 50.0% | |
| TGGTCTAGCACTACCAGTAC+TGG | - | chr3_3:7077677-7077696 | None:intergenic | 50.0% | |
| GAATACGAGAACATCCACCG+GGG | - | chr3_3:7077738-7077757 | None:intergenic | 50.0% | |
| ! | CTGATGGCTTGGGTTTCGAA+AGG | - | chr3_3:7077918-7077937 | None:intergenic | 50.0% |
| CCGATTTCCATTGCAGAGGT+TGG | - | chr3_3:7078018-7078037 | None:intergenic | 50.0% | |
| AGGGCAGGTTCTCACTGTAT+TGG | - | chr3_3:7078049-7078068 | None:intergenic | 50.0% | |
| !! | TGGGGCTAGCTGTTTCTACA+AGG | + | chr3_3:7078321-7078340 | Msa0440230:CDS | 50.0% |
| ! | CAATCTTGGTTGGTGCCTAC+TGG | + | chr3_3:7079261-7079280 | Msa0440230:intron | 50.0% |
| !! | TATAGGAGTAATGGGCGGAG+GGG | - | chr3_3:7079379-7079398 | None:intergenic | 50.0% |
| CAACTAGCGGCTCTGTATCA+GGG | - | chr3_3:7079679-7079698 | None:intergenic | 50.0% | |
| ! | ATGACGCATTGCATTGGCGA+TGG | + | chr3_3:7079778-7079797 | Msa0440230:intron | 50.0% |
| TAATGCTGGACTGCTGGTAG+TGG | + | chr3_3:7079987-7080006 | Msa0440230:intron | 50.0% | |
| GGTGAGCTAAGGGACATCAA+AGG | - | chr3_3:7080151-7080170 | None:intergenic | 50.0% | |
| !! | GTAGCTCAGTTGGTGAGCTA+AGG | - | chr3_3:7080162-7080181 | None:intergenic | 50.0% |
| TGCTTGTTCAGCAGCTAGCT+AGG | + | chr3_3:7080551-7080570 | Msa0440230:intron | 50.0% | |
| TCAACAACAGTGTAGGGGAG+GGG | - | chr3_3:7080681-7080700 | None:intergenic | 50.0% | |
| CATCAACAACAGTGTAGGGG+AGG | - | chr3_3:7080683-7080702 | None:intergenic | 50.0% | |
| GTTTCGGTAGGCTAGGACAA+TGG | - | chr3_3:7080720-7080739 | None:intergenic | 50.0% | |
| TTCAAGGGTTTCGGTAGGCT+AGG | - | chr3_3:7080727-7080746 | None:intergenic | 50.0% | |
| CTGTGTTCAAGGGTTTCGGT+AGG | - | chr3_3:7080732-7080751 | None:intergenic | 50.0% | |
| GTGGCTGTGTTCAAGGGTTT+CGG | - | chr3_3:7080736-7080755 | None:intergenic | 50.0% | |
| ACAAGGGTGGCTGTGTTCAA+GGG | - | chr3_3:7080742-7080761 | None:intergenic | 50.0% | |
| AACAAGGGTGGCTGTGTTCA+AGG | - | chr3_3:7080743-7080762 | None:intergenic | 50.0% | |
| ! | AAGGTGTCTGGAAACAAGGG+TGG | - | chr3_3:7080755-7080774 | None:intergenic | 50.0% |
| ! | ATTTTGTCAGGTGGAGGTGG+TGG | - | chr3_3:7080784-7080803 | None:intergenic | 50.0% |
| !! | CGGGTGGACTAAATAATGGC+AGG | - | chr3_3:7080846-7080865 | None:intergenic | 50.0% |
| CAGGGCAGTTAAACACCTCA+TGG | + | chr3_3:7080871-7080890 | Msa0440230:intron | 50.0% | |
| !! | GACTAGATAAGGAGCACCCT+TGG | + | chr3_3:7080893-7080912 | Msa0440230:intron | 50.0% |
| TGAAGCCTGGCTCATACACA+TGG | + | chr3_3:7081175-7081194 | Msa0440230:CDS | 50.0% | |
| TGTCTCCATGTGTATGAGCC+AGG | - | chr3_3:7081183-7081202 | None:intergenic | 50.0% | |
| ! | TTTTGTCTGCGTTGAGGTGG+TGG | - | chr3_3:7081213-7081232 | None:intergenic | 50.0% |
| !!! | TGGTTTTGTCTGCGTTGAGG+TGG | - | chr3_3:7081216-7081235 | None:intergenic | 50.0% |
| GCATTATCAGATTCGCTGGC+TGG | + | chr3_3:7081354-7081373 | Msa0440230:CDS | 50.0% | |
| ! | TTATCAGATTCGCTGGCTGG+CGG | + | chr3_3:7081357-7081376 | Msa0440230:CDS | 50.0% |
| ! | GCTCTTGGGATGGATGCTTT+TGG | + | chr3_3:7081468-7081487 | Msa0440230:CDS | 50.0% |
| CCTCATCGTCATCGTCATCA+GGG | - | chr3_3:7081494-7081513 | None:intergenic | 50.0% | |
| TCCTCATCGTCATCGTCATC+AGG | - | chr3_3:7081495-7081514 | None:intergenic | 50.0% | |
| TCGAATGGCTGCTATGCAAG+AGG | + | chr3_3:7081530-7081549 | Msa0440230:CDS | 50.0% | |
| ATGCAAGAGGCCATGGTTTC+TGG | + | chr3_3:7081543-7081562 | Msa0440230:CDS | 50.0% | |
| TGCAAGAGGCCATGGTTTCT+GGG | + | chr3_3:7081544-7081563 | Msa0440230:CDS | 50.0% | |
| GCGCGAGGCGTATGTTTGAA+AGG | + | chr3_3:7077112-7077131 | Msa0440230:CDS | 55.0% | |
| TTCAGATTCTGCTGCGCCTG+TGG | + | chr3_3:7077531-7077550 | Msa0440230:CDS | 55.0% | |
| GTTCCTTCACCTGACAAGCG+TGG | + | chr3_3:7077601-7077620 | Msa0440230:CDS | 55.0% | |
| ACACCACGCTTGTCAGGTGA+AGG | - | chr3_3:7077607-7077626 | None:intergenic | 55.0% | |
| CCCTTTACACCACGCTTGTC+AGG | - | chr3_3:7077613-7077632 | None:intergenic | 55.0% | |
| TAGTGCCCCAACCTCTGCAA+TGG | + | chr3_3:7078008-7078027 | Msa0440230:CDS | 55.0% | |
| ! | TAGTTTGCGGCAAACAGGGC+AGG | - | chr3_3:7078064-7078083 | None:intergenic | 55.0% |
| GCAACTAGCGGCTCTGTATC+AGG | - | chr3_3:7079680-7079699 | None:intergenic | 55.0% | |
| TCGGTAGGCTAGGACAATGG+TGG | - | chr3_3:7080717-7080736 | None:intergenic | 55.0% | |
| !! | TGGTGGTGATGGAAGGTGTC+TGG | - | chr3_3:7080767-7080786 | None:intergenic | 55.0% |
| TAACTGCCCTGTGTTTCGGG+TGG | - | chr3_3:7080862-7080881 | None:intergenic | 55.0% | |
| CATACACATGGAGACACCGC+AGG | + | chr3_3:7081187-7081206 | Msa0440230:CDS | 55.0% | |
| ! | CATGTTGGATGTGCTCGGTG+AGG | + | chr3_3:7081251-7081270 | Msa0440230:CDS | 55.0% |
| TGGCGGTTCAGGTCCTTGTT+TGG | + | chr3_3:7081374-7081393 | Msa0440230:CDS | 55.0% | |
| ! | GGCGGTTCAGGTCCTTGTTT+GGG | + | chr3_3:7081375-7081394 | Msa0440230:CDS | 55.0% |
| TGCTGCTATGCAAGAGGCCA+TGG | + | chr3_3:7081446-7081465 | Msa0440230:CDS | 55.0% | |
| ATGCAAGAGGCCATGGCTCT+TGG | + | chr3_3:7081453-7081472 | Msa0440230:CDS | 55.0% | |
| TGCAAGAGGCCATGGCTCTT+GGG | + | chr3_3:7081454-7081473 | Msa0440230:CDS | 55.0% | |
| AGCATCCATCCCAAGAGCCA+TGG | - | chr3_3:7081466-7081485 | None:intergenic | 55.0% | |
| ! | CCCTGATGACGATGACGATG+AGG | + | chr3_3:7081491-7081510 | Msa0440230:CDS | 55.0% |
| TTTGCTGCTGCCAACTGCCC+CGG | + | chr3_3:7077718-7077737 | Msa0440230:CDS | 60.0% | |
| AGAACATCCACCGGGGCAGT+TGG | - | chr3_3:7077731-7077750 | None:intergenic | 60.0% | |
| ATGCGCGCTAACCACGCATC+TGG | + | chr3_3:7078549-7078568 | Msa0440230:intron | 60.0% | |
| !! | AGTAATGGGCGGAGGGGTGA+TGG | - | chr3_3:7079373-7079392 | None:intergenic | 60.0% |
| GGGGAGGGGCAAACAAGGTT+GGG | - | chr3_3:7080667-7080686 | None:intergenic | 60.0% | |
| AGGGGAGGGGCAAACAAGGT+TGG | - | chr3_3:7080668-7080687 | None:intergenic | 60.0% | |
| GTGTAGGGGAGGGGCAAACA+AGG | - | chr3_3:7080672-7080691 | None:intergenic | 60.0% | |
| !! | GTGGAGGTGGTGGTGATGGA+AGG | - | chr3_3:7080774-7080793 | None:intergenic | 60.0% |
| ! | TCAGGTGGAGGTGGTGGTGA+TGG | - | chr3_3:7080778-7080797 | None:intergenic | 60.0% |
| AGAGGCCATGGCTCTTGGGA+TGG | + | chr3_3:7081458-7081477 | Msa0440230:CDS | 60.0% | |
| GGCTGCTATGCAAGAGGCCA+TGG | + | chr3_3:7081536-7081555 | Msa0440230:CDS | 60.0% | |
| ! | TGCGTTGAGGTGGTGGCCTG+CGG | - | chr3_3:7081206-7081225 | None:intergenic | 65.0% |
| ! | GATTCGCTGGCTGGCGGTTC+AGG | + | chr3_3:7081363-7081382 | Msa0440230:CDS | 65.0% |
| GCTGCTGCCAACTGCCCCGG+TGG | + | chr3_3:7077721-7077740 | Msa0440230:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 7076410 | 7082065 | 7076410 | ID=Msa0440230;Name=Msa0440230 |
| chr3_3 | mRNA | 7076410 | 7082065 | 7076410 | ID=Msa0440230-mRNA-1;Parent=Msa0440230;Name=Msa0440230-mRNA-1;_AED=0.03;_eAED=0.03;_QI=76|1|1|1|0.75|0.8|5|352|482 |
| chr3_3 | exon | 7076410 | 7076496 | 7076410 | ID=Msa0440230-mRNA-1:exon:1470;Parent=Msa0440230-mRNA-1 |
| chr3_3 | exon | 7077096 | 7077180 | 7077096 | ID=Msa0440230-mRNA-1:exon:1471;Parent=Msa0440230-mRNA-1 |
| chr3_3 | exon | 7077433 | 7078169 | 7077433 | ID=Msa0440230-mRNA-1:exon:1472;Parent=Msa0440230-mRNA-1 |
| chr3_3 | exon | 7078273 | 7078342 | 7078273 | ID=Msa0440230-mRNA-1:exon:1473;Parent=Msa0440230-mRNA-1 |
| chr3_3 | exon | 7081168 | 7082065 | 7081168 | ID=Msa0440230-mRNA-1:exon:1474;Parent=Msa0440230-mRNA-1 |
| chr3_3 | five_prime_UTR | 7076410 | 7076485 | 7076410 | ID=Msa0440230-mRNA-1:five_prime_utr;Parent=Msa0440230-mRNA-1 |
| chr3_3 | CDS | 7076486 | 7076496 | 7076486 | ID=Msa0440230-mRNA-1:cds;Parent=Msa0440230-mRNA-1 |
| chr3_3 | CDS | 7077096 | 7077180 | 7077096 | ID=Msa0440230-mRNA-1:cds;Parent=Msa0440230-mRNA-1 |
| chr3_3 | CDS | 7077433 | 7078169 | 7077433 | ID=Msa0440230-mRNA-1:cds;Parent=Msa0440230-mRNA-1 |
| chr3_3 | CDS | 7078273 | 7078342 | 7078273 | ID=Msa0440230-mRNA-1:cds;Parent=Msa0440230-mRNA-1 |
| chr3_3 | CDS | 7081168 | 7081713 | 7081168 | ID=Msa0440230-mRNA-1:cds;Parent=Msa0440230-mRNA-1 |
| chr3_3 | three_prime_UTR | 7081714 | 7082065 | 7081714 | ID=Msa0440230-mRNA-1:three_prime_utr;Parent=Msa0440230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
