Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494210 | XP_003599125.1 | 97.723 | 483 | 8 | 2 | 1 | 482 | 1 | 481 | 0.0 | 979 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494210 | sp|E0X9N4|C3H69_ARATH | 49.593 | 369 | 153 | 9 | 1 | 357 | 1 | 348 | 5.92e-108 | 327 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494210 | G7IWL7 | 97.723 | 483 | 8 | 2 | 1 | 482 | 1 | 481 | 0.0 | 979 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0494210 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0440230 | Msa0494210 | 0.952361 | 2.858601e-110 | -8.615850e-47 |
| Msa0494210 | Msa0494400 | 0.978556 | 4.490552e-146 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494210 | MtrunA17_Chr3g0087881 | 91.304 | 483 | 11 | 2 | 1 | 482 | 1 | 453 | 0.0 | 904 |
| Msa0494210 | MtrunA17_Chr3g0087891 | 52.888 | 329 | 126 | 8 | 1 | 307 | 1 | 322 | 5.86e-106 | 319 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494210 | AT3G08505.1 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 2.74e-99 | 301 |
| Msa0494210 | AT3G08505.2 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 2.74e-99 | 301 |
| Msa0494210 | AT3G08505.3 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 2.74e-99 | 301 |
Find 121 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCAAGAGGCCATGGTTTC+TGG | 0.092914 | 3_4:+21937946 | Msa0494210:CDS |
| AATCTTTCCATAGGGTATTA+TGG | 0.172622 | 3_4:-21938361 | None:intergenic |
| CCTGCATCCTACTGATAAAA+AGG | 0.246259 | 3_4:+21934195 | Msa0494210:CDS |
| GTTTCTGGGATAGATGATTT+TGG | 0.250360 | 3_4:+21937961 | Msa0494210:CDS |
| CAGAAAGGGTCTTGTGCTTA+TGG | 0.259648 | 3_4:+21933851 | Msa0494210:CDS |
| GATTCGCTGGCTGGCGGTTC+AGG | 0.263297 | 3_4:+21937766 | Msa0494210:CDS |
| GTGCTAAAGTAGCATCAAAT+TGG | 0.277566 | 3_4:+21933963 | Msa0494210:CDS |
| ATCTTTCCATAGGGTATTAT+GGG | 0.286860 | 3_4:-21938360 | None:intergenic |
| TAAGCCAAAACTCCTTAAAA+TGG | 0.290440 | 3_4:-21938285 | None:intergenic |
| AGCATCATCTTCAGCATCTA+TGG | 0.292528 | 3_4:+21933910 | Msa0494210:CDS |
| TTTGAGGACTTGTGACAAAA+AGG | 0.300862 | 3_4:+21934231 | Msa0494210:CDS |
| GCTCTTGGGATGGATGCTTT+TGG | 0.301364 | 3_4:+21937871 | Msa0494210:CDS |
| TTGTCATTCCAAGTGGTATT+TGG | 0.301592 | 3_4:+21934494 | Msa0494210:CDS |
| AAGCCATCAGAATGTAAGTT+TGG | 0.301620 | 3_4:+21934331 | Msa0494210:CDS |
| TGGCGGTTCAGGTCCTTGTT+TGG | 0.314287 | 3_4:+21937777 | Msa0494210:CDS |
| GGCGGTTCAGGTCCTTGTTT+GGG | 0.319796 | 3_4:+21937778 | Msa0494210:CDS |
| GGAAATGGAAATTGTCCATT+TGG | 0.321258 | 3_4:+21934704 | Msa0494210:CDS |
| TCCTCATCGTCATCGTCATC+AGG | 0.328553 | 3_4:-21937895 | None:intergenic |
| AGGTGACACAACTTAGTTAA+AGG | 0.354092 | 3_4:-21938166 | None:intergenic |
| ATGCAAGAGGCCATGGCTCT+TGG | 0.356930 | 3_4:+21937856 | Msa0494210:CDS |
| TATGATAGTTTGCGGCAAAC+AGG | 0.366308 | 3_4:-21934469 | None:intergenic |
| CAGAAAGCGTGATCACATTC+TGG | 0.369919 | 3_4:-21934361 | None:intergenic |
| GAAATGGAAATTGTCCATTT+GGG | 0.373127 | 3_4:+21934705 | Msa0494210:CDS |
| GTTTGTCATGTATTCGCAAT+TGG | 0.373825 | 3_4:+21934383 | Msa0494210:CDS |
| CGATTTCCATTGCAGAGGTT+GGG | 0.374375 | 3_4:-21934417 | None:intergenic |
| CCCTTTACACCACGCTTGTC+AGG | 0.379427 | 3_4:-21934013 | None:intergenic |
| AAACTTACATTCTGATGGCT+TGG | 0.395562 | 3_4:-21934329 | None:intergenic |
| CCTGACAAGCGTGGTGTAAA+GGG | 0.396694 | 3_4:+21934013 | Msa0494210:CDS |
| TGCAAGAGGCCATGGTTTCT+GGG | 0.408782 | 3_4:+21937947 | Msa0494210:CDS |
| AACTTACATTCTGATGGCTT+GGG | 0.410250 | 3_4:-21934328 | None:intergenic |
| TGCAAGAGGCCATGGCTCTT+GGG | 0.417374 | 3_4:+21937857 | Msa0494210:CDS |
| AATGATGATGCATTCTCATA+TGG | 0.418914 | 3_4:+21938032 | Msa0494210:CDS |
| TCAATTCCATGAAAATCATC+AGG | 0.425647 | 3_4:-21937985 | None:intergenic |
| ATAATACCCTATGGAAAGAT+TGG | 0.430057 | 3_4:+21938363 | Msa0494210:three_prime_UTR |
| TGATGAATATTAGATTTACT+TGG | 0.430199 | 3_4:+21938104 | Msa0494210:exon |
| ACCTGACAAGCGTGGTGTAA+AGG | 0.433230 | 3_4:+21934012 | Msa0494210:CDS |
| TCTTATGAAAATCATTTGGC+AGG | 0.435477 | 3_4:+21938195 | Msa0494210:three_prime_UTR |
| GATAATGCCATCATCTCAAA+TGG | 0.443626 | 3_4:-21937742 | None:intergenic |
| AAAATCTCACCATGTCCAAC+AGG | 0.444234 | 3_4:+21932878 | Msa0494210:exon |
| AGCCATCAGAATGTAAGTTT+GGG | 0.447348 | 3_4:+21934332 | Msa0494210:CDS |
| CCGATTTCCATTGCAGAGGT+TGG | 0.450187 | 3_4:-21934418 | None:intergenic |
| GATTCAGACGATGAGGATGA+TGG | 0.450779 | 3_4:+21937808 | Msa0494210:CDS |
| CCAACCTCTGCAATGGAAAT+CGG | 0.452415 | 3_4:+21934418 | Msa0494210:CDS |
| TTTGCTCTTATTATCAGAAA+GGG | 0.457240 | 3_4:+21933837 | Msa0494210:CDS |
| ACATGTCATGCATATCGAAA+TGG | 0.462288 | 3_4:-21937636 | None:intergenic |
| TGCTGCTATGCAAGAGGCCA+TGG | 0.469668 | 3_4:+21937849 | Msa0494210:CDS |
| ATTTGCTCTTATTATCAGAA+AGG | 0.469932 | 3_4:+21933836 | Msa0494210:CDS |
| TACCCTATGGAAAGATTGGT+TGG | 0.476893 | 3_4:+21938367 | Msa0494210:three_prime_UTR |
| GGGTTTACAACGCAAGCATC+AGG | 0.478209 | 3_4:+21934033 | Msa0494210:CDS |
| GCATTATCAGATTCGCTGGC+TGG | 0.489570 | 3_4:+21937757 | Msa0494210:CDS |
| TGCTAAAGTAGCATCAAATT+GGG | 0.490703 | 3_4:+21933964 | Msa0494210:CDS |
| AATGGATCCATTTGAGATGA+TGG | 0.491467 | 3_4:+21937735 | Msa0494210:CDS |
| GATTTCCATTGCAGAGGTTG+GGG | 0.493235 | 3_4:-21934416 | None:intergenic |
| TAGAAACAGCTAGCCCCAAA+TGG | 0.494880 | 3_4:-21934719 | None:intergenic |
| GGCTGCTATGCAAGAGGCCA+TGG | 0.495488 | 3_4:+21937939 | Msa0494210:CDS |
| TGGTCTAGCACTACCAGTAC+TGG | 0.497170 | 3_4:-21934077 | None:intergenic |
| TGTCTCCATGTGTATGAGCC+AGG | 0.499940 | 3_4:-21937583 | None:intergenic |
| TCCTCATCGTCTGAATCAAA+AGG | 0.507460 | 3_4:-21937802 | None:intergenic |
| AAACCAACCAATCTTTCCAT+AGG | 0.507522 | 3_4:-21938370 | None:intergenic |
| GAAGGAACCTTTGTAACCTT+CGG | 0.509713 | 3_4:-21933989 | None:intergenic |
| AGGGCAGGTTCTCACTGTAT+TGG | 0.515799 | 3_4:-21934449 | None:intergenic |
| GATGGCATTATCAGATTCGC+TGG | 0.519486 | 3_4:+21937753 | Msa0494210:CDS |
| GTGAATCCCATAATACCCTA+TGG | 0.520258 | 3_4:+21938354 | Msa0494210:three_prime_UTR |
| TAGTTTGCGGCAAACAGGGC+AGG | 0.521329 | 3_4:-21934464 | None:intergenic |
| TGACAAAATATGATAGTTTG+CGG | 0.523339 | 3_4:-21934477 | None:intergenic |
| AGGAAAAGGAAAATCATTTG+AGG | 0.527601 | 3_4:+21934215 | Msa0494210:CDS |
| AAAATCTGAGTCCCTCATGA+TGG | 0.533480 | 3_4:-21937704 | None:intergenic |
| TGGGGCTAGCTGTTTCTACA+AGG | 0.535393 | 3_4:+21934724 | Msa0494210:CDS |
| CTGATGGCTTGGGTTTCGAA+AGG | 0.535450 | 3_4:-21934318 | None:intergenic |
| ATTCAGACGATGAGGATGAT+GGG | 0.536703 | 3_4:+21937809 | Msa0494210:CDS |
| GCGCGAGGCGTATGTTTGAA+AGG | 0.542739 | 3_4:+21933515 | Msa0494210:CDS |
| TTTGCTGCTGCCAACTGCCC+CGG | 0.543300 | 3_4:+21934121 | Msa0494210:CDS |
| TTCAGATTCTGCTGCGCCTG+TGG | 0.544702 | 3_4:+21933934 | Msa0494210:CDS |
| AACCCAAACTTACATTCTGA+TGG | 0.549424 | 3_4:-21934334 | None:intergenic |
| AACCAACCAATCTTTCCATA+GGG | 0.553971 | 3_4:-21938369 | None:intergenic |
| TTTCAGCATACAGTGAAGCC+TGG | 0.555178 | 3_4:+21937565 | Msa0494210:intron |
| ATGATAGTTTGCGGCAAACA+GGG | 0.556192 | 3_4:-21934468 | None:intergenic |
| GATATCAAAGCTGCATCCAT+AGG | 0.558891 | 3_4:-21938009 | None:intergenic |
| TCAAATTGCTGCTATGCAAG+AGG | 0.561508 | 3_4:+21937843 | Msa0494210:CDS |
| AGAACATCCACCGGGGCAGT+TGG | 0.563489 | 3_4:-21934131 | None:intergenic |
| TGGTATTTGGTTTACTACAA+AGG | 0.568402 | 3_4:+21934507 | Msa0494210:CDS |
| GATGCTACTAAACTTTAACT+AGG | 0.569840 | 3_4:-21938397 | None:intergenic |
| AGCATCAAATTGGGTTCCGA+AGG | 0.575611 | 3_4:+21933973 | Msa0494210:CDS |
| TGCGTTGAGGTGGTGGCCTG+CGG | 0.577755 | 3_4:-21937606 | None:intergenic |
| TAGTGCCCCAACCTCTGCAA+TGG | 0.580807 | 3_4:+21934411 | Msa0494210:CDS |
| TTTCGATATGCATGACATGT+TGG | 0.582133 | 3_4:+21937639 | Msa0494210:CDS |
| CCTCATCGTCATCGTCATCA+GGG | 0.582725 | 3_4:-21937894 | None:intergenic |
| TCGAATGGCTGCTATGCAAG+AGG | 0.583412 | 3_4:+21937933 | Msa0494210:CDS |
| AAGATGATGCTTGAGAAGCT+CGG | 0.587317 | 3_4:-21933898 | None:intergenic |
| AGAGGCCATGGCTCTTGGGA+TGG | 0.587677 | 3_4:+21937861 | Msa0494210:CDS |
| GGTCTTGTGCTTATGGTAGT+CGG | 0.588927 | 3_4:+21933858 | Msa0494210:CDS |
| TTGGGTTCCGAAGGTTACAA+AGG | 0.589756 | 3_4:+21933982 | Msa0494210:CDS |
| ACACCACGCTTGTCAGGTGA+AGG | 0.590498 | 3_4:-21934007 | None:intergenic |
| GGTGGATGTTCTCGTATTCA+CGG | 0.596225 | 3_4:+21934142 | Msa0494210:CDS |
| AGCATCCATCCCAAGAGCCA+TGG | 0.600499 | 3_4:-21937866 | None:intergenic |
| ATCATCTATCCCAGAAACCA+TGG | 0.600753 | 3_4:-21937956 | None:intergenic |
| TGAATACGAGAACATCCACC+GGG | 0.602886 | 3_4:-21934139 | None:intergenic |
| ACTTTAGCACTACGAGCCAC+AGG | 0.603612 | 3_4:-21933950 | None:intergenic |
| TTATCAGATTCGCTGGCTGG+CGG | 0.606192 | 3_4:+21937760 | Msa0494210:CDS |
| GCTGCTGCCAACTGCCCCGG+TGG | 0.606750 | 3_4:+21934124 | Msa0494210:CDS |
| TGAAGCCTGGCTCATACACA+TGG | 0.611090 | 3_4:+21937578 | Msa0494210:CDS |
| AAATGGAAATTGTCCATTTG+GGG | 0.614806 | 3_4:+21934706 | Msa0494210:CDS |
| GATGTCGGTGAATCCAGTAC+TGG | 0.616230 | 3_4:+21934064 | Msa0494210:CDS |
| ATAACTACAAGGCAAACTGC+AGG | 0.617185 | 3_4:+21934551 | Msa0494210:CDS |
| CATGACATGTTGGATGTGCT+CGG | 0.619477 | 3_4:+21937649 | Msa0494210:CDS |
| GTAGTAAACCAAATACCACT+TGG | 0.621876 | 3_4:-21934502 | None:intergenic |
| GGAAATTATTGATAACTACA+AGG | 0.622897 | 3_4:+21934540 | Msa0494210:CDS |
| GAATCAAAAGGACCCAAACA+AGG | 0.628395 | 3_4:-21937790 | None:intergenic |
| CATCAGGACTGTACCGATGT+CGG | 0.630976 | 3_4:+21934049 | Msa0494210:CDS |
| AGTACTGGATTCACCGACAT+CGG | 0.632271 | 3_4:-21934062 | None:intergenic |
| GTGAATACGAGAACATCCAC+CGG | 0.635675 | 3_4:-21934140 | None:intergenic |
| GGTGAGGTTGATCTATCAAG+TGG | 0.638628 | 3_4:+21937670 | Msa0494210:CDS |
| ACTACCGATTTCCATTGCAG+AGG | 0.647818 | 3_4:-21934422 | None:intergenic |
| TGAGATTTACCTGTTGGACA+TGG | 0.648362 | 3_4:-21932887 | None:intergenic |
| CATACACATGGAGACACCGC+AGG | 0.651112 | 3_4:+21937590 | Msa0494210:CDS |
| CAATTCCATGAAAATCATCA+GGG | 0.655793 | 3_4:-21937984 | None:intergenic |
| GTTCCTTCACCTGACAAGCG+TGG | 0.673427 | 3_4:+21934004 | Msa0494210:CDS |
| CCCTGATGACGATGACGATG+AGG | 0.676584 | 3_4:+21937894 | Msa0494210:CDS |
| AGAAGAAGATGAAGATTACG+AGG | 0.692698 | 3_4:+21938062 | Msa0494210:CDS |
| CATGTTGGATGTGCTCGGTG+AGG | 0.698239 | 3_4:+21937654 | Msa0494210:CDS |
| GAATACGAGAACATCCACCG+GGG | 0.861616 | 3_4:-21934138 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAAAAATTTAATTAAA+AGG | + | chr3_4:21937340-21937359 | Msa0494210:intron | 0.0% |
| !! | TTATAAAAATTTAATTAAAA+GGG | + | chr3_4:21937341-21937360 | Msa0494210:intron | 0.0% |
| !!! | TTTAGGTTAATTTAATTTTA+GGG | + | chr3_4:21933209-21933228 | Msa0494210:intron | 10.0% |
| !!! | ATTTTTGAAATTTAACTTTT+AGG | + | chr3_4:21933257-21933276 | Msa0494210:intron | 10.0% |
| !!! | TTTTTGAAATTTAACTTTTA+GGG | + | chr3_4:21933258-21933277 | Msa0494210:intron | 10.0% |
| !! | AACAACATAAATAATCAAAT+GGG | - | chr3_4:21933035-21933054 | None:intergenic | 15.0% |
| !! | TAACAACATAAATAATCAAA+TGG | - | chr3_4:21933036-21933055 | None:intergenic | 15.0% |
| !!! | GTTTAGGTTAATTTAATTTT+AGG | + | chr3_4:21933208-21933227 | Msa0494210:intron | 15.0% |
| !!! | TCAAACATATTTTCAAAAAT+GGG | - | chr3_4:21935741-21935760 | None:intergenic | 15.0% |
| !!! | ATCAAACATATTTTCAAAAA+TGG | - | chr3_4:21935742-21935761 | None:intergenic | 15.0% |
| !!! | GTATTATTTTAATCTGAAAT+TGG | - | chr3_4:21936419-21936438 | None:intergenic | 15.0% |
| !! | ATTTCAGATTAAAATAATAC+TGG | + | chr3_4:21936419-21936438 | Msa0494210:intron | 15.0% |
| !!! | TTTTAGAAAAAAATTACCAA+GGG | - | chr3_4:21937315-21937334 | None:intergenic | 15.0% |
| !! | TCTCAAAAACTAATATAAAA+TGG | - | chr3_4:21937502-21937521 | None:intergenic | 15.0% |
| !!! | TTTTATATTAGTTTTTGAGA+TGG | + | chr3_4:21937502-21937521 | Msa0494210:intron | 15.0% |
| !!! | TTGTATGATTTTTGCAATTT+AGG | + | chr3_4:21932986-21933005 | Msa0494210:intron | 20.0% |
| !! | AAGTACATCATACAAAAAAA+AGG | - | chr3_4:21933370-21933389 | None:intergenic | 20.0% |
| !!! | AGTAATTGAAGATTATTTCT+TGG | + | chr3_4:21933418-21933437 | Msa0494210:intron | 20.0% |
| !! | TTAAATCTATGAATTGTTTC+AGG | + | chr3_4:21933477-21933496 | Msa0494210:intron | 20.0% |
| !! | TAAATCTATGAATTGTTTCA+GGG | + | chr3_4:21933478-21933497 | Msa0494210:intron | 20.0% |
| !! | TGTATTTATATTGTTCTTAC+TGG | + | chr3_4:21933793-21933812 | Msa0494210:intron | 20.0% |
| !!! | TTACAAAACAAATTTTCATG+TGG | - | chr3_4:21934100-21934119 | None:intergenic | 20.0% |
| !! | ATCTGAAAGAGAAAAAAAAT+AGG | - | chr3_4:21934658-21934677 | None:intergenic | 20.0% |
| !! | AAATATAAAAGAAAGAGAGA+TGG | - | chr3_4:21934752-21934771 | None:intergenic | 20.0% |
| !!! | TCTTTCTTTTATATTTTCCT+TGG | + | chr3_4:21934756-21934775 | Msa0494210:intron | 20.0% |
| !! | TATTTCTTATTCTTAGAAGT+AGG | + | chr3_4:21935019-21935038 | Msa0494210:intron | 20.0% |
| !!! | CTTTAATTTAGAATATGGAT+TGG | + | chr3_4:21935063-21935082 | Msa0494210:intron | 20.0% |
| !!! | CAAGTTCTTTTACAAATTTT+AGG | - | chr3_4:21935235-21935254 | None:intergenic | 20.0% |
| !!! | AGTTTACATTTTTTTCTTAC+AGG | + | chr3_4:21935284-21935303 | Msa0494210:intron | 20.0% |
| !!! | GTTTACATTTTTTTCTTACA+GGG | + | chr3_4:21935285-21935304 | Msa0494210:intron | 20.0% |
| !!! | TTTACATTTTTTTCTTACAG+GGG | + | chr3_4:21935286-21935305 | Msa0494210:intron | 20.0% |
| !! | ATATAATACATATGTGTGTA+CGG | - | chr3_4:21935350-21935369 | None:intergenic | 20.0% |
| !! | TATTACTACTTGTCTTTAAT+TGG | + | chr3_4:21935470-21935489 | Msa0494210:intron | 20.0% |
| !! | AATCTCATCTAAAAAACTAA+AGG | + | chr3_4:21936143-21936162 | Msa0494210:intron | 20.0% |
| !! | TTACTAGCATAATACATTAT+TGG | + | chr3_4:21936365-21936384 | Msa0494210:intron | 20.0% |
| !! | ATTAAAATAATACTGGTAGT+GGG | + | chr3_4:21936426-21936445 | Msa0494210:intron | 20.0% |
| !!! | AGCACATATATTTTTTCAAA+GGG | + | chr3_4:21936709-21936728 | Msa0494210:intron | 20.0% |
| !!! | ATATTTCTAAACTATCTTGT+TGG | - | chr3_4:21937039-21937058 | None:intergenic | 20.0% |
| !!! | GTTTTAGAAAAAAATTACCA+AGG | - | chr3_4:21937316-21937335 | None:intergenic | 20.0% |
| !! | CCTAAAATACTATGAAATAT+CGG | + | chr3_4:21937411-21937430 | Msa0494210:intron | 20.0% |
| !! | CTAAAATACTATGAAATATC+GGG | + | chr3_4:21937412-21937431 | Msa0494210:intron | 20.0% |
| !! | GTAAATGTAAATATTGTCTT+TGG | + | chr3_4:21937464-21937483 | Msa0494210:intron | 20.0% |
| !! | TAATATAAAATGGATATGCA+AGG | - | chr3_4:21937492-21937511 | None:intergenic | 20.0% |
| !! | TGATGAATATTAGATTTACT+TGG | + | chr3_4:21938104-21938123 | Msa0494210:exon | 20.0% |
| !!! | TCAAAAACTGTTTAAAACTA+GGG | - | chr3_4:21938141-21938160 | None:intergenic | 20.0% |
| !!! | TTCAAAAACTGTTTAAAACT+AGG | - | chr3_4:21938142-21938161 | None:intergenic | 20.0% |
| !!! | CTTTTCTTATGAAAATCATT+TGG | + | chr3_4:21938191-21938210 | Msa0494210:three_prime_UTR | 20.0% |
| !! | TTTGCAATTTAGGTTTCAAA+AGG | + | chr3_4:21932996-21933015 | Msa0494210:intron | 25.0% |
| !! | TTGCAATTTAGGTTTCAAAA+GGG | + | chr3_4:21932997-21933016 | Msa0494210:intron | 25.0% |
| !!! | GATTGTTTTAAGCTATTTTC+TGG | + | chr3_4:21933108-21933127 | Msa0494210:intron | 25.0% |
| !! | AATCAGTTCTTTTTCTGTTT+AGG | + | chr3_4:21933192-21933211 | Msa0494210:intron | 25.0% |
| ! | ATACAAAGTAGAAAACACAT+TGG | - | chr3_4:21933778-21933797 | None:intergenic | 25.0% |
| ! | ATTTGCTCTTATTATCAGAA+AGG | + | chr3_4:21933836-21933855 | Msa0494210:CDS | 25.0% |
| ! | TTTGCTCTTATTATCAGAAA+GGG | + | chr3_4:21933837-21933856 | Msa0494210:CDS | 25.0% |
| ! | TGACAAAATATGATAGTTTG+CGG | - | chr3_4:21934480-21934499 | None:intergenic | 25.0% |
| !! | GGAAATTATTGATAACTACA+AGG | + | chr3_4:21934540-21934559 | Msa0494210:CDS | 25.0% |
| ! | AATTATTAAGCGTGAATGTT+TGG | + | chr3_4:21934612-21934631 | Msa0494210:intron | 25.0% |
| ! | AATTTATATGGCTATATGGA+TGG | - | chr3_4:21934894-21934913 | None:intergenic | 25.0% |
| ! | GGATAATTTATATGGCTATA+TGG | - | chr3_4:21934898-21934917 | None:intergenic | 25.0% |
| ! | ATTGGCATTTATTGAAAGAA+AGG | - | chr3_4:21935139-21935158 | None:intergenic | 25.0% |
| ! | CAAATTTCAACATTCTGTAT+TGG | - | chr3_4:21935157-21935176 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGTCTCATGTAGT+AGG | + | chr3_4:21935403-21935422 | Msa0494210:intron | 25.0% |
| ! | GATCTATAGATCTAGTAAAA+TGG | - | chr3_4:21935545-21935564 | None:intergenic | 25.0% |
| ! | ATGCTGTGGAAATTAAATAT+GGG | - | chr3_4:21935573-21935592 | None:intergenic | 25.0% |
| !! | AGATTGAAGAAACTATTTCT+AGG | - | chr3_4:21935650-21935669 | None:intergenic | 25.0% |
| ! | AGAAATAGTTTCTTCAATCT+TGG | + | chr3_4:21935650-21935669 | Msa0494210:intron | 25.0% |
| ! | ACTAGTATTTAGTGGTTTAT+AGG | - | chr3_4:21935799-21935818 | None:intergenic | 25.0% |
| ! | ATTGATCAACTAGTATTTAG+TGG | - | chr3_4:21935807-21935826 | None:intergenic | 25.0% |
| ! | AAATACTAGTTGATCAATAG+AGG | + | chr3_4:21935809-21935828 | Msa0494210:intron | 25.0% |
| ! | AATACTAGTTGATCAATAGA+GGG | + | chr3_4:21935810-21935829 | Msa0494210:intron | 25.0% |
| ! | ATCACGAATATAAACCATAT+TGG | - | chr3_4:21935872-21935891 | None:intergenic | 25.0% |
| !! | TGATTTGGACATTGTAAATA+TGG | - | chr3_4:21936029-21936048 | None:intergenic | 25.0% |
| !!! | GATAATTTTGATGGTTTCTT+TGG | - | chr3_4:21936222-21936241 | None:intergenic | 25.0% |
| ! | ACCATCAAAATTATCTTCAA+AGG | + | chr3_4:21936227-21936246 | Msa0494210:intron | 25.0% |
| !!! | TCCTTTGAAGATAATTTTGA+TGG | - | chr3_4:21936231-21936250 | None:intergenic | 25.0% |
| ! | TATTATGCTAGTAACCTATA+GGG | - | chr3_4:21936359-21936378 | None:intergenic | 25.0% |
| ! | ATACATTATTGGAATAATGC+TGG | + | chr3_4:21936376-21936395 | Msa0494210:intron | 25.0% |
| ! | GATTAAAATAATACTGGTAG+TGG | + | chr3_4:21936425-21936444 | Msa0494210:intron | 25.0% |
| !!! | GAGCACATATATTTTTTCAA+AGG | + | chr3_4:21936708-21936727 | Msa0494210:intron | 25.0% |
| !! | TGTTTATTACGTAGTGTTTT+TGG | + | chr3_4:21936993-21937012 | Msa0494210:intron | 25.0% |
| !! | TACAAAGTTATGATTTTGTC+AGG | - | chr3_4:21937199-21937218 | None:intergenic | 25.0% |
| ! | TTAAAAGGGGAAAACAAATT+AGG | + | chr3_4:21937355-21937374 | Msa0494210:intron | 25.0% |
| !! | CCGATATTTCATAGTATTTT+AGG | - | chr3_4:21937414-21937433 | None:intergenic | 25.0% |
| !! | AGAATTTTATTCCATCATGA+GGG | + | chr3_4:21937693-21937712 | Msa0494210:CDS | 25.0% |
| !!! | AGAGTTTAATGTTTTTCGAA+TGG | + | chr3_4:21937918-21937937 | Msa0494210:CDS | 25.0% |
| !! | TGATTTTCATAAGAAAAGAG+AGG | - | chr3_4:21938189-21938208 | None:intergenic | 25.0% |
| GAAAAACGATCGAAGAAAAA+AGG | - | chr3_4:21932917-21932936 | None:intergenic | 30.0% | |
| ! | TGCAATTTAGGTTTCAAAAG+GGG | + | chr3_4:21932998-21933017 | Msa0494210:intron | 30.0% |
| TCTGATGAGAAAAATCACAT+TGG | - | chr3_4:21933544-21933563 | None:intergenic | 30.0% | |
| ! | TGATTTTTCTCATCAGAGAA+AGG | + | chr3_4:21933547-21933566 | Msa0494210:CDS | 30.0% |
| TATCACTAATGTTGATGTGT+CGG | + | chr3_4:21933712-21933731 | Msa0494210:intron | 30.0% | |
| TGCTAAAGTAGCATCAAATT+GGG | + | chr3_4:21933964-21933983 | Msa0494210:CDS | 30.0% | |
| TCCTACTGATAAAAAGGAAA+AGG | + | chr3_4:21934201-21934220 | Msa0494210:CDS | 30.0% | |
| ! | TCCTTTTCCTTTTTATCAGT+AGG | - | chr3_4:21934205-21934224 | None:intergenic | 30.0% |
| AGGAAAAGGAAAATCATTTG+AGG | + | chr3_4:21934215-21934234 | Msa0494210:CDS | 30.0% | |
| ! | TCATATTTTGTCATTCCAAG+TGG | + | chr3_4:21934487-21934506 | Msa0494210:CDS | 30.0% |
| ! | TGGTATTTGGTTTACTACAA+AGG | + | chr3_4:21934507-21934526 | Msa0494210:CDS | 30.0% |
| TACTACAAAGGAAGAAAAAC+AGG | + | chr3_4:21934519-21934538 | Msa0494210:CDS | 30.0% | |
| !!! | GATTGTAAACATTTTGACTC+TGG | + | chr3_4:21934683-21934702 | Msa0494210:CDS | 30.0% |
| !!! | AAACATTTTGACTCTGGAAA+TGG | + | chr3_4:21934689-21934708 | Msa0494210:CDS | 30.0% |
| GAAATGGAAATTGTCCATTT+GGG | + | chr3_4:21934705-21934724 | Msa0494210:CDS | 30.0% | |
| AAATGGAAATTGTCCATTTG+GGG | + | chr3_4:21934706-21934725 | Msa0494210:CDS | 30.0% | |
| AGAACTAATCCAACAAAGAA+AGG | - | chr3_4:21934865-21934884 | None:intergenic | 30.0% | |
| AACAACATCTACAAGGATTT+GGG | - | chr3_4:21934927-21934946 | None:intergenic | 30.0% | |
| ATAAGTCAACAACATCTACA+AGG | - | chr3_4:21934934-21934953 | None:intergenic | 30.0% | |
| ! | TAGGTTTCTTTCCCTTTTAT+GGG | + | chr3_4:21935038-21935057 | Msa0494210:intron | 30.0% |
| AAATTAAAGCCCCCATAAAA+GGG | - | chr3_4:21935052-21935071 | None:intergenic | 30.0% | |
| TAAATTAAAGCCCCCATAAA+AGG | - | chr3_4:21935053-21935072 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTCTTACAGGGGAT+GGG | + | chr3_4:21935291-21935310 | Msa0494210:intron | 30.0% |
| TGCTGTGGAAATTAAATATG+GGG | - | chr3_4:21935572-21935591 | None:intergenic | 30.0% | |
| GATGCTGTGGAAATTAAATA+TGG | - | chr3_4:21935574-21935593 | None:intergenic | 30.0% | |
| TTCAAAAGCTCAAACAGATT+GGG | - | chr3_4:21935625-21935644 | None:intergenic | 30.0% | |
| ATTCAAAAGCTCAAACAGAT+TGG | - | chr3_4:21935626-21935645 | None:intergenic | 30.0% | |
| ATAGTTTCTTCAATCTTGGT+TGG | + | chr3_4:21935654-21935673 | Msa0494210:intron | 30.0% | |
| TAGTGGTTTATAGGAGTAAT+GGG | - | chr3_4:21935790-21935809 | None:intergenic | 30.0% | |
| TTAGTGGTTTATAGGAGTAA+TGG | - | chr3_4:21935791-21935810 | None:intergenic | 30.0% | |
| TAGAGGGAAAATGAGTTTAA+AGG | + | chr3_4:21935826-21935845 | Msa0494210:intron | 30.0% | |
| TTACTACACATTGGAATACA+TGG | - | chr3_4:21935962-21935981 | None:intergenic | 30.0% | |
| TATTCCAATGTGTAGTAACT+AGG | + | chr3_4:21935964-21935983 | Msa0494210:intron | 30.0% | |
| ! | CTTAATCCTAATCACTGATT+TGG | - | chr3_4:21936044-21936063 | None:intergenic | 30.0% |
| CAAATCAGTGATTAGGATTA+AGG | + | chr3_4:21936042-21936061 | Msa0494210:intron | 30.0% | |
| ATGATAGAATGTTGTGTAAG+TGG | - | chr3_4:21936121-21936140 | None:intergenic | 30.0% | |
| ! | TTGATGGTTTCTTTGGATTT+GGG | - | chr3_4:21936215-21936234 | None:intergenic | 30.0% |
| ! | TTTGATGGTTTCTTTGGATT+TGG | - | chr3_4:21936216-21936235 | None:intergenic | 30.0% |
| ! | AGTCAGCCATAAAATTTTGT+AGG | + | chr3_4:21936297-21936316 | Msa0494210:intron | 30.0% |
| !! | ACAAATTTTGGGTGACTATA+GGG | - | chr3_4:21936328-21936347 | None:intergenic | 30.0% |
| !! | TACAAATTTTGGGTGACTAT+AGG | - | chr3_4:21936329-21936348 | None:intergenic | 30.0% |
| TATAGTCACCCAAAATTTGT+AGG | + | chr3_4:21936328-21936347 | Msa0494210:intron | 30.0% | |
| GTATTATGCTAGTAACCTAT+AGG | - | chr3_4:21936360-21936379 | None:intergenic | 30.0% | |
| ATTACCGTTTAGTATTGTAG+TGG | + | chr3_4:21936480-21936499 | Msa0494210:intron | 30.0% | |
| CTAACCACTACAATACTAAA+CGG | - | chr3_4:21936487-21936506 | None:intergenic | 30.0% | |
| TTAGGTTATGGTAGTTTCTA+GGG | + | chr3_4:21936503-21936522 | Msa0494210:intron | 30.0% | |
| !!! | AAGGAGTTTTAAGAAGTTCA+AGG | - | chr3_4:21936535-21936554 | None:intergenic | 30.0% |
| !! | GCAATTTGTTAATCTGAATG+TGG | - | chr3_4:21936646-21936665 | None:intergenic | 30.0% |
| !!! | ATTTTTTCAAAGGGTGAGTA+TGG | + | chr3_4:21936718-21936737 | Msa0494210:intron | 30.0% |
| TGGAAACAAGTACTATCATA+TGG | + | chr3_4:21936738-21936757 | Msa0494210:intron | 30.0% | |
| AACAGAAAAAAGACCAAAGA+GGG | + | chr3_4:21936808-21936827 | Msa0494210:intron | 30.0% | |
| CACTACGTAATAAACACAAT+AGG | - | chr3_4:21936989-21937008 | None:intergenic | 30.0% | |
| ! | AAAGTTATGATTTTGTCAGG+TGG | - | chr3_4:21937196-21937215 | None:intergenic | 30.0% |
| ! | ACTTTTGAACATAGACACTA+AGG | - | chr3_4:21937381-21937400 | None:intergenic | 30.0% |
| ! | GAGAATTTTATTCCATCATG+AGG | + | chr3_4:21937692-21937711 | Msa0494210:CDS | 30.0% |
| CAATTCCATGAAAATCATCA+GGG | - | chr3_4:21937987-21938006 | None:intergenic | 30.0% | |
| TCAATTCCATGAAAATCATC+AGG | - | chr3_4:21937988-21938007 | None:intergenic | 30.0% | |
| ! | TTTTCATGGAATTGATCCTA+TGG | + | chr3_4:21937993-21938012 | Msa0494210:CDS | 30.0% |
| ! | AATGATGATGCATTCTCATA+TGG | + | chr3_4:21938032-21938051 | Msa0494210:CDS | 30.0% |
| TCTTATGAAAATCATTTGGC+AGG | + | chr3_4:21938195-21938214 | Msa0494210:three_prime_UTR | 30.0% | |
| !!! | AGATCATATGCCATTTTTGA+AGG | + | chr3_4:21938254-21938273 | Msa0494210:three_prime_UTR | 30.0% |
| TAAGCCAAAACTCCTTAAAA+TGG | - | chr3_4:21938288-21938307 | None:intergenic | 30.0% | |
| !!! | TTTTAAGGAGTTTTGGCTTA+AGG | + | chr3_4:21938288-21938307 | Msa0494210:three_prime_UTR | 30.0% |
| !!! | TTTAAGGAGTTTTGGCTTAA+GGG | + | chr3_4:21938289-21938308 | Msa0494210:three_prime_UTR | 30.0% |
| ! | ATCTTTCCATAGGGTATTAT+GGG | - | chr3_4:21938363-21938382 | None:intergenic | 30.0% |
| ! | AATCTTTCCATAGGGTATTA+TGG | - | chr3_4:21938364-21938383 | None:intergenic | 30.0% |
| ATAATACCCTATGGAAAGAT+TGG | + | chr3_4:21938363-21938382 | Msa0494210:three_prime_UTR | 30.0% | |
| GATGCTACTAAACTTTAACT+AGG | - | chr3_4:21938400-21938419 | None:intergenic | 30.0% | |
| !! | ACATGGTGAGATTTTAGGAA+CGG | - | chr3_4:21932873-21932892 | None:intergenic | 35.0% |
| CATTGGTCAGTAACAGTAAA+TGG | - | chr3_4:21933606-21933625 | None:intergenic | 35.0% | |
| !! | ATCGGTGCTACAAAATACAT+TGG | - | chr3_4:21933623-21933642 | None:intergenic | 35.0% |
| CAAAGTAGAAAACACATTGG+CGG | - | chr3_4:21933775-21933794 | None:intergenic | 35.0% | |
| GTGCTAAAGTAGCATCAAAT+TGG | + | chr3_4:21933963-21933982 | Msa0494210:CDS | 35.0% | |
| TTTGAGGACTTGTGACAAAA+AGG | + | chr3_4:21934231-21934250 | Msa0494210:CDS | 35.0% | |
| !! | CAAAAAGGAAAAGTACCTTC+TGG | + | chr3_4:21934246-21934265 | Msa0494210:CDS | 35.0% |
| AACTTACATTCTGATGGCTT+GGG | - | chr3_4:21934331-21934350 | None:intergenic | 35.0% | |
| AAACTTACATTCTGATGGCT+TGG | - | chr3_4:21934332-21934351 | None:intergenic | 35.0% | |
| AAGCCATCAGAATGTAAGTT+TGG | + | chr3_4:21934331-21934350 | Msa0494210:CDS | 35.0% | |
| AGCCATCAGAATGTAAGTTT+GGG | + | chr3_4:21934332-21934351 | Msa0494210:CDS | 35.0% | |
| AACCCAAACTTACATTCTGA+TGG | - | chr3_4:21934337-21934356 | None:intergenic | 35.0% | |
| GTTTGTCATGTATTCGCAAT+TGG | + | chr3_4:21934383-21934402 | Msa0494210:CDS | 35.0% | |
| TTGTCATTCCAAGTGGTATT+TGG | + | chr3_4:21934494-21934513 | Msa0494210:CDS | 35.0% | |
| GTAGTAAACCAAATACCACT+TGG | - | chr3_4:21934505-21934524 | None:intergenic | 35.0% | |
| ATTCTTGCAAGCATACACAA+CGG | - | chr3_4:21934595-21934614 | None:intergenic | 35.0% | |
| GGAAATGGAAATTGTCCATT+TGG | + | chr3_4:21934704-21934723 | Msa0494210:CDS | 35.0% | |
| ATGATAATCAAGCTTGACCA+AGG | - | chr3_4:21934776-21934795 | None:intergenic | 35.0% | |
| CAACAAAGAAAGGAAAAGCA+TGG | - | chr3_4:21934855-21934874 | None:intergenic | 35.0% | |
| ! | CATGCTTTTCCTTTCTTTGT+TGG | + | chr3_4:21934853-21934872 | Msa0494210:intron | 35.0% |
| GGGAGAACGGATAATTTATA+TGG | - | chr3_4:21934906-21934925 | None:intergenic | 35.0% | |
| ACAACATCTACAAGGATTTG+GGG | - | chr3_4:21934926-21934945 | None:intergenic | 35.0% | |
| CAACAACATCTACAAGGATT+TGG | - | chr3_4:21934928-21934947 | None:intergenic | 35.0% | |
| GATTATTTAATCCAGATGCG+TGG | - | chr3_4:21934966-21934985 | None:intergenic | 35.0% | |
| ! | GTAGGTTTCTTTCCCTTTTA+TGG | + | chr3_4:21935037-21935056 | Msa0494210:intron | 35.0% |
| ! | AGGTTTCTTTCCCTTTTATG+GGG | + | chr3_4:21935039-21935058 | Msa0494210:intron | 35.0% |
| ! | GGGGGCTTTAATTTAGAATA+TGG | + | chr3_4:21935058-21935077 | Msa0494210:intron | 35.0% |
| GTGAATATCTTTCACCTCAT+AGG | + | chr3_4:21935179-21935198 | Msa0494210:intron | 35.0% | |
| !!! | CATTTTTTTCTTACAGGGGA+TGG | + | chr3_4:21935290-21935309 | Msa0494210:intron | 35.0% |
| ! | GTGAATGATTGTTGTTCAGT+TGG | - | chr3_4:21935328-21935347 | None:intergenic | 35.0% |
| TGAAACTACTTGGAAGATCT+TGG | - | chr3_4:21935507-21935526 | None:intergenic | 35.0% | |
| GTAAAATGGTGAATGTGTCA+AGG | - | chr3_4:21935531-21935550 | None:intergenic | 35.0% | |
| AGATGAAATAAGAGATGCTG+TGG | - | chr3_4:21935587-21935606 | None:intergenic | 35.0% | |
| TTGCGTTAACACAACCAATA+TGG | + | chr3_4:21935855-21935874 | Msa0494210:intron | 35.0% | |
| GAAAGTAGGGAATGTAATTG+AGG | - | chr3_4:21935933-21935952 | None:intergenic | 35.0% | |
| TACATGGAGCATAGAAAGTA+GGG | - | chr3_4:21935946-21935965 | None:intergenic | 35.0% | |
| ATACATGGAGCATAGAAAGT+AGG | - | chr3_4:21935947-21935966 | None:intergenic | 35.0% | |
| TTCTCCTAGTTACTACACAT+TGG | - | chr3_4:21935971-21935990 | None:intergenic | 35.0% | |
| CAATGTCCAAATCAGTGATT+AGG | + | chr3_4:21936035-21936054 | Msa0494210:intron | 35.0% | |
| GAATGTTGTGTAAGTGGTAA+AGG | - | chr3_4:21936115-21936134 | None:intergenic | 35.0% | |
| ! | TTAAGCTTTTACCCACCATA+TGG | + | chr3_4:21936251-21936270 | Msa0494210:intron | 35.0% |
| ! | TAAGCTTTTACCCACCATAT+GGG | + | chr3_4:21936252-21936271 | Msa0494210:intron | 35.0% |
| !! | GTCTACTAGACTTGTTAATG+AGG | + | chr3_4:21936274-21936293 | Msa0494210:intron | 35.0% |
| ! | GCCATAAAATTTTGTAGGCA+TGG | + | chr3_4:21936302-21936321 | Msa0494210:intron | 35.0% |
| ! | GCCATGCCTACAAAATTTTA+TGG | - | chr3_4:21936306-21936325 | None:intergenic | 35.0% |
| TCACCCAAAATTTGTAGGTA+TGG | + | chr3_4:21936333-21936352 | Msa0494210:intron | 35.0% | |
| CGTTTAGTATTGTAGTGGTT+AGG | + | chr3_4:21936485-21936504 | Msa0494210:intron | 35.0% | |
| GTATTGTAGTGGTTAGGTTA+TGG | + | chr3_4:21936491-21936510 | Msa0494210:intron | 35.0% | |
| GTTAGGTTATGGTAGTTTCT+AGG | + | chr3_4:21936502-21936521 | Msa0494210:intron | 35.0% | |
| !!! | GACACTCTTGTTTTTCCATT+TGG | + | chr3_4:21936597-21936616 | Msa0494210:intron | 35.0% |
| GATGTATTCGTTTGACCAAA+TGG | - | chr3_4:21936615-21936634 | None:intergenic | 35.0% | |
| TGAAGTGAAGACAATAGGAA+GGG | - | chr3_4:21936781-21936800 | None:intergenic | 35.0% | |
| ATGAAGTGAAGACAATAGGA+AGG | - | chr3_4:21936782-21936801 | None:intergenic | 35.0% | |
| TGTCATGAAGTGAAGACAAT+AGG | - | chr3_4:21936786-21936805 | None:intergenic | 35.0% | |
| GAACAGAAAAAAGACCAAAG+AGG | + | chr3_4:21936807-21936826 | Msa0494210:intron | 35.0% | |
| ACAGAAAAAAGACCAAAGAG+GGG | + | chr3_4:21936809-21936828 | Msa0494210:intron | 35.0% | |
| ! | TTTTGTGATCCATGAGTTGT+TGG | + | chr3_4:21936853-21936872 | Msa0494210:intron | 35.0% |
| TTGGCTGAAAATGATACTAG+AGG | + | chr3_4:21936876-21936895 | Msa0494210:intron | 35.0% | |
| !!! | TACGTAGTGTTTTTGGTGAT+AGG | + | chr3_4:21937000-21937019 | Msa0494210:intron | 35.0% |
| !!! | ACGTAGTGTTTTTGGTGATA+GGG | + | chr3_4:21937001-21937020 | Msa0494210:intron | 35.0% |
| ACATGTCATGCATATCGAAA+TGG | - | chr3_4:21937639-21937658 | None:intergenic | 35.0% | |
| TTTCGATATGCATGACATGT+TGG | + | chr3_4:21937639-21937658 | Msa0494210:CDS | 35.0% | |
| !!! | AGGGACTCAGATTTTTTTGA+GGG | + | chr3_4:21937712-21937731 | Msa0494210:CDS | 35.0% |
| !!! | CTCAGATTTTTTTGAGGGAA+TGG | + | chr3_4:21937717-21937736 | Msa0494210:CDS | 35.0% |
| ! | AATGGATCCATTTGAGATGA+TGG | + | chr3_4:21937735-21937754 | Msa0494210:CDS | 35.0% |
| GATAATGCCATCATCTCAAA+TGG | - | chr3_4:21937745-21937764 | None:intergenic | 35.0% | |
| !!! | GTTTCTGGGATAGATGATTT+TGG | + | chr3_4:21937961-21937980 | Msa0494210:CDS | 35.0% |
| AGAAGAAGATGAAGATTACG+AGG | + | chr3_4:21938062-21938081 | Msa0494210:CDS | 35.0% | |
| AGGTGACACAACTTAGTTAA+AGG | - | chr3_4:21938169-21938188 | None:intergenic | 35.0% | |
| !!! | AAGGTCATGTTGCCATTTTA+AGG | + | chr3_4:21938273-21938292 | Msa0494210:three_prime_UTR | 35.0% |
| !!! | GTTGCCATTTTAAGGAGTTT+TGG | + | chr3_4:21938281-21938300 | Msa0494210:three_prime_UTR | 35.0% |
| !!! | TTGGCTTAAGGGTTTTGTTT+TGG | + | chr3_4:21938300-21938319 | Msa0494210:three_prime_UTR | 35.0% |
| !!! | GGGTTTTGTTTTGGATTTTG+TGG | + | chr3_4:21938309-21938328 | Msa0494210:three_prime_UTR | 35.0% |
| AACCAACCAATCTTTCCATA+GGG | - | chr3_4:21938372-21938391 | None:intergenic | 35.0% | |
| AAACCAACCAATCTTTCCAT+AGG | - | chr3_4:21938373-21938392 | None:intergenic | 35.0% | |
| ! | GTTGGACATGGTGAGATTTT+AGG | - | chr3_4:21932878-21932897 | None:intergenic | 40.0% |
| AAAATCTCACCATGTCCAAC+AGG | + | chr3_4:21932878-21932897 | Msa0494210:exon | 40.0% | |
| TGAGATTTACCTGTTGGACA+TGG | - | chr3_4:21932890-21932909 | None:intergenic | 40.0% | |
| !! | GGTTGATGAGATTTACCTGT+TGG | - | chr3_4:21932896-21932915 | None:intergenic | 40.0% |
| AAGATGATGCTTGAGAAGCT+CGG | - | chr3_4:21933901-21933920 | None:intergenic | 40.0% | |
| AGCATCATCTTCAGCATCTA+TGG | + | chr3_4:21933910-21933929 | Msa0494210:CDS | 40.0% | |
| GAAGGAACCTTTGTAACCTT+CGG | - | chr3_4:21933992-21934011 | None:intergenic | 40.0% | |
| ! | CCTTTTTATCAGTAGGATGC+AGG | - | chr3_4:21934198-21934217 | None:intergenic | 40.0% |
| CCTGCATCCTACTGATAAAA+AGG | + | chr3_4:21934195-21934214 | Msa0494210:CDS | 40.0% | |
| ! | ATGATAGTTTGCGGCAAACA+GGG | - | chr3_4:21934471-21934490 | None:intergenic | 40.0% |
| ! | TATGATAGTTTGCGGCAAAC+AGG | - | chr3_4:21934472-21934491 | None:intergenic | 40.0% |
| ATAACTACAAGGCAAACTGC+AGG | + | chr3_4:21934551-21934570 | Msa0494210:CDS | 40.0% | |
| ! | GGTTTCTTTCCCTTTTATGG+GGG | + | chr3_4:21935040-21935059 | Msa0494210:intron | 40.0% |
| CTCTACATCATCTTCCTATG+AGG | - | chr3_4:21935196-21935215 | None:intergenic | 40.0% | |
| CTCATAGGAAGATGATGTAG+AGG | + | chr3_4:21935194-21935213 | Msa0494210:intron | 40.0% | |
| ! | GTAGTAGGCAAGTGGTATTT+TGG | + | chr3_4:21935418-21935437 | Msa0494210:intron | 40.0% |
| !! | GCAAGTGGTATTTTGGACTT+TGG | + | chr3_4:21935425-21935444 | Msa0494210:intron | 40.0% |
| GTGTCAAGGATGAAACTACT+TGG | - | chr3_4:21935517-21935536 | None:intergenic | 40.0% | |
| ! | TGGTTTATAGGAGTAATGGG+CGG | - | chr3_4:21935787-21935806 | None:intergenic | 40.0% |
| CAATGCGTCATAACTCAAAG+AGG | - | chr3_4:21936172-21936191 | None:intergenic | 40.0% | |
| TGAGTTATGACGCATTGCAT+TGG | + | chr3_4:21936175-21936194 | Msa0494210:intron | 40.0% | |
| ACAAGTCTAGTAGACCCATA+TGG | - | chr3_4:21936269-21936288 | None:intergenic | 40.0% | |
| ! | GGGCCATACCTACAAATTTT+GGG | - | chr3_4:21936339-21936358 | None:intergenic | 40.0% |
| ! | AGGGCCATACCTACAAATTT+TGG | - | chr3_4:21936340-21936359 | None:intergenic | 40.0% |
| ATTTGTAGGTATGGCCCTAT+AGG | + | chr3_4:21936342-21936361 | Msa0494210:intron | 40.0% | |
| ACCAACTGAGCTACTTACTT+GGG | + | chr3_4:21936571-21936590 | Msa0494210:intron | 40.0% | |
| ! | ACACTTGTAGCTTTACACGT+TGG | - | chr3_4:21936675-21936694 | None:intergenic | 40.0% |
| AATAGGAAGGGTCTGGATAT+AGG | - | chr3_4:21936769-21936788 | None:intergenic | 40.0% | |
| !! | TAACACTGATTTCCCCTCTT+TGG | - | chr3_4:21936824-21936843 | None:intergenic | 40.0% |
| ACTCATTCTCAGATCACTCA+TGG | - | chr3_4:21936921-21936940 | None:intergenic | 40.0% | |
| AAGCATCAACAACAGTGTAG+GGG | - | chr3_4:21937089-21937108 | None:intergenic | 40.0% | |
| CAAGCATCAACAACAGTGTA+GGG | - | chr3_4:21937090-21937109 | None:intergenic | 40.0% | |
| ACAAGCATCAACAACAGTGT+AGG | - | chr3_4:21937091-21937110 | None:intergenic | 40.0% | |
| ! | GTTATGATTTTGTCAGGTGG+AGG | - | chr3_4:21937193-21937212 | None:intergenic | 40.0% |
| !! | GTTTCGGGTGGACTAAATAA+TGG | - | chr3_4:21937253-21937272 | None:intergenic | 40.0% |
| TGTTTAACTGCCCTGTGTTT+CGG | - | chr3_4:21937269-21937288 | None:intergenic | 40.0% | |
| !! | AACACCTCATGGACTAGATA+AGG | + | chr3_4:21937285-21937304 | Msa0494210:intron | 40.0% |
| !!! | AAATGGTTTTGTCTGCGTTG+AGG | - | chr3_4:21937622-21937641 | None:intergenic | 40.0% |
| AAAATCTGAGTCCCTCATGA+TGG | - | chr3_4:21937707-21937726 | None:intergenic | 40.0% | |
| !!! | GAGGGACTCAGATTTTTTTG+AGG | + | chr3_4:21937711-21937730 | Msa0494210:CDS | 40.0% |
| GAATCAAAAGGACCCAAACA+AGG | - | chr3_4:21937793-21937812 | None:intergenic | 40.0% | |
| TCAAATTGCTGCTATGCAAG+AGG | + | chr3_4:21937843-21937862 | Msa0494210:CDS | 40.0% | |
| ATCATCTATCCCAGAAACCA+TGG | - | chr3_4:21937959-21937978 | None:intergenic | 40.0% | |
| ! | TTTGGCCCTGATGATTTTCA+TGG | + | chr3_4:21937979-21937998 | Msa0494210:CDS | 40.0% |
| GATATCAAAGCTGCATCCAT+AGG | - | chr3_4:21938012-21938031 | None:intergenic | 40.0% | |
| GGCAACATGACCTTCAAAAA+TGG | - | chr3_4:21938267-21938286 | None:intergenic | 40.0% | |
| GTGAATCCCATAATACCCTA+TGG | + | chr3_4:21938354-21938373 | Msa0494210:three_prime_UTR | 40.0% | |
| TACCCTATGGAAAGATTGGT+TGG | + | chr3_4:21938367-21938386 | Msa0494210:three_prime_UTR | 40.0% | |
| !! | GTTTGCAAGTTTTATGCGCG+AGG | + | chr3_4:21933500-21933519 | Msa0494210:CDS | 45.0% |
| ! | GTGTCGGTGATTAGAGGTAT+CGG | - | chr3_4:21933641-21933660 | None:intergenic | 45.0% |
| GAGTCAATGTCGTGTTGTGT+CGG | - | chr3_4:21933657-21933676 | None:intergenic | 45.0% | |
| GTGAAACACTGACACCAGAT+AGG | - | chr3_4:21933753-21933772 | None:intergenic | 45.0% | |
| ! | CAGAAAGGGTCTTGTGCTTA+TGG | + | chr3_4:21933851-21933870 | Msa0494210:CDS | 45.0% |
| ! | GGTCTTGTGCTTATGGTAGT+CGG | + | chr3_4:21933858-21933877 | Msa0494210:CDS | 45.0% |
| AGCATCAAATTGGGTTCCGA+AGG | + | chr3_4:21933973-21933992 | Msa0494210:CDS | 45.0% | |
| TTGGGTTCCGAAGGTTACAA+AGG | + | chr3_4:21933982-21934001 | Msa0494210:CDS | 45.0% | |
| ! | AGTACTGGATTCACCGACAT+CGG | - | chr3_4:21934065-21934084 | None:intergenic | 45.0% |
| TGAATACGAGAACATCCACC+GGG | - | chr3_4:21934142-21934161 | None:intergenic | 45.0% | |
| GTGAATACGAGAACATCCAC+CGG | - | chr3_4:21934143-21934162 | None:intergenic | 45.0% | |
| GGTGGATGTTCTCGTATTCA+CGG | + | chr3_4:21934142-21934161 | Msa0494210:CDS | 45.0% | |
| !!! | CGCTGTTTTTCAAAGCCAGA+AGG | - | chr3_4:21934264-21934283 | None:intergenic | 45.0% |
| ! | CAGAAAGCGTGATCACATTC+TGG | - | chr3_4:21934364-21934383 | None:intergenic | 45.0% |
| GATTTCCATTGCAGAGGTTG+GGG | - | chr3_4:21934419-21934438 | None:intergenic | 45.0% | |
| CGATTTCCATTGCAGAGGTT+GGG | - | chr3_4:21934420-21934439 | None:intergenic | 45.0% | |
| CCAACCTCTGCAATGGAAAT+CGG | + | chr3_4:21934418-21934437 | Msa0494210:CDS | 45.0% | |
| !! | ACTACCGATTTCCATTGCAG+AGG | - | chr3_4:21934425-21934444 | None:intergenic | 45.0% |
| TAGAAACAGCTAGCCCCAAA+TGG | - | chr3_4:21934722-21934741 | None:intergenic | 45.0% | |
| CTACAAGGATTTGGGGAGAA+CGG | - | chr3_4:21934919-21934938 | None:intergenic | 45.0% | |
| GGACAAGTTGCTAAAGCTTG+TGG | - | chr3_4:21935118-21935137 | None:intergenic | 45.0% | |
| TGTCTCATGTAGTAGGCAAG+TGG | + | chr3_4:21935410-21935429 | Msa0494210:intron | 45.0% | |
| TTGGAAGATCTTGGAGACGA+TGG | - | chr3_4:21935498-21935517 | None:intergenic | 45.0% | |
| TGCAACATACACTAGCCAGT+AGG | - | chr3_4:21935682-21935701 | None:intergenic | 45.0% | |
| !! | TTATAGGAGTAATGGGCGGA+GGG | - | chr3_4:21935783-21935802 | None:intergenic | 45.0% |
| !! | TTTATAGGAGTAATGGGCGG+AGG | - | chr3_4:21935784-21935803 | None:intergenic | 45.0% |
| AGGACAATGCTAGCAACTAG+CGG | - | chr3_4:21936095-21936114 | None:intergenic | 45.0% | |
| GTCTAGTAGACCCATATGGT+GGG | - | chr3_4:21936265-21936284 | None:intergenic | 45.0% | |
| AGTCTAGTAGACCCATATGG+TGG | - | chr3_4:21936266-21936285 | None:intergenic | 45.0% | |
| TTGGAATAATGCTGGACTGC+TGG | + | chr3_4:21936384-21936403 | Msa0494210:intron | 45.0% | |
| !! | ATACTGGTAGTGGGTAAGAG+TGG | + | chr3_4:21936435-21936454 | Msa0494210:intron | 45.0% |
| ! | TAGTGGGTAAGAGTGGAAGT+AGG | + | chr3_4:21936442-21936461 | Msa0494210:intron | 45.0% |
| !! | TAGCTCAGTTGGTGAGCTAA+GGG | - | chr3_4:21936564-21936583 | None:intergenic | 45.0% |
| CACCAACTGAGCTACTTACT+TGG | + | chr3_4:21936570-21936589 | Msa0494210:intron | 45.0% | |
| TCCCAAGTAAGTAGCTCAGT+TGG | - | chr3_4:21936575-21936594 | None:intergenic | 45.0% | |
| TGAAGACAATAGGAAGGGTC+TGG | - | chr3_4:21936776-21936795 | None:intergenic | 45.0% | |
| GTGATCCATGAGTTGTTGGT+TGG | + | chr3_4:21936857-21936876 | Msa0494210:intron | 45.0% | |
| TTCAGCCAACCAACAACTCA+TGG | - | chr3_4:21936865-21936884 | None:intergenic | 45.0% | |
| GATACTAGAGGCTAGAGCTA+TGG | + | chr3_4:21936888-21936907 | Msa0494210:intron | 45.0% | |
| !!! | AGTGTTTTTGGTGATAGGGC+AGG | + | chr3_4:21937005-21937024 | Msa0494210:intron | 45.0% |
| ATCAACAACAGTGTAGGGGA+GGG | - | chr3_4:21937085-21937104 | None:intergenic | 45.0% | |
| !! | TGGAAGGTGTCTGGAAACAA+GGG | - | chr3_4:21937161-21937180 | None:intergenic | 45.0% |
| !! | ATGGAAGGTGTCTGGAAACA+AGG | - | chr3_4:21937162-21937181 | None:intergenic | 45.0% |
| ! | ATGATTTTGTCAGGTGGAGG+TGG | - | chr3_4:21937190-21937209 | None:intergenic | 45.0% |
| ATTTAGTCCACCCGAAACAC+AGG | + | chr3_4:21937255-21937274 | Msa0494210:intron | 45.0% | |
| TTTAGTCCACCCGAAACACA+GGG | + | chr3_4:21937256-21937275 | Msa0494210:intron | 45.0% | |
| GTTTAACTGCCCTGTGTTTC+GGG | - | chr3_4:21937268-21937287 | None:intergenic | 45.0% | |
| TGCTCCTTATCTAGTCCATG+AGG | - | chr3_4:21937292-21937311 | None:intergenic | 45.0% | |
| TTTCAGCATACAGTGAAGCC+TGG | + | chr3_4:21937565-21937584 | Msa0494210:intron | 45.0% | |
| CATGACATGTTGGATGTGCT+CGG | + | chr3_4:21937649-21937668 | Msa0494210:CDS | 45.0% | |
| ! | GGTGAGGTTGATCTATCAAG+TGG | + | chr3_4:21937670-21937689 | Msa0494210:CDS | 45.0% |
| GATGGCATTATCAGATTCGC+TGG | + | chr3_4:21937753-21937772 | Msa0494210:CDS | 45.0% | |
| !! | TATAAAAATTTAATTAAAAG+GGG | + | chr3_4:21937342-21937361 | Msa0494210:intron | 5.0% |
| ! | CGTGTTGTGTCGGTGATTAG+AGG | - | chr3_4:21933647-21933666 | None:intergenic | 50.0% |
| GTCGTTGTCAGTGTCCTATC+TGG | + | chr3_4:21933736-21933755 | Msa0494210:intron | 50.0% | |
| ACTTTAGCACTACGAGCCAC+AGG | - | chr3_4:21933953-21933972 | None:intergenic | 50.0% | |
| ACCTGACAAGCGTGGTGTAA+AGG | + | chr3_4:21934012-21934031 | Msa0494210:CDS | 50.0% | |
| CCTGACAAGCGTGGTGTAAA+GGG | + | chr3_4:21934013-21934032 | Msa0494210:CDS | 50.0% | |
| GGGTTTACAACGCAAGCATC+AGG | + | chr3_4:21934033-21934052 | Msa0494210:CDS | 50.0% | |
| ! | CATCAGGACTGTACCGATGT+CGG | + | chr3_4:21934049-21934068 | Msa0494210:CDS | 50.0% |
| GATGTCGGTGAATCCAGTAC+TGG | + | chr3_4:21934064-21934083 | Msa0494210:CDS | 50.0% | |
| TGGTCTAGCACTACCAGTAC+TGG | - | chr3_4:21934080-21934099 | None:intergenic | 50.0% | |
| GAATACGAGAACATCCACCG+GGG | - | chr3_4:21934141-21934160 | None:intergenic | 50.0% | |
| ! | CTGATGGCTTGGGTTTCGAA+AGG | - | chr3_4:21934321-21934340 | None:intergenic | 50.0% |
| CCGATTTCCATTGCAGAGGT+TGG | - | chr3_4:21934421-21934440 | None:intergenic | 50.0% | |
| AGGGCAGGTTCTCACTGTAT+TGG | - | chr3_4:21934452-21934471 | None:intergenic | 50.0% | |
| !! | TGGGGCTAGCTGTTTCTACA+AGG | + | chr3_4:21934724-21934743 | Msa0494210:CDS | 50.0% |
| ! | CAATCTTGGTTGGTGCCTAC+TGG | + | chr3_4:21935664-21935683 | Msa0494210:intron | 50.0% |
| !! | TATAGGAGTAATGGGCGGAG+GGG | - | chr3_4:21935782-21935801 | None:intergenic | 50.0% |
| CAACTAGCGGCTCTGTATCA+GGG | - | chr3_4:21936082-21936101 | None:intergenic | 50.0% | |
| ! | ATGACGCATTGCATTGGCGA+TGG | + | chr3_4:21936181-21936200 | Msa0494210:intron | 50.0% |
| TAATGCTGGACTGCTGGTAG+TGG | + | chr3_4:21936390-21936409 | Msa0494210:intron | 50.0% | |
| GGTGAGCTAAGGGACATCAA+AGG | - | chr3_4:21936554-21936573 | None:intergenic | 50.0% | |
| !! | GTAGCTCAGTTGGTGAGCTA+AGG | - | chr3_4:21936565-21936584 | None:intergenic | 50.0% |
| TGCTTGTTCAGCAGCTAGCT+AGG | + | chr3_4:21936954-21936973 | Msa0494210:intron | 50.0% | |
| TCAACAACAGTGTAGGGGAG+GGG | - | chr3_4:21937084-21937103 | None:intergenic | 50.0% | |
| CATCAACAACAGTGTAGGGG+AGG | - | chr3_4:21937086-21937105 | None:intergenic | 50.0% | |
| GTTTCGGTAGGCTAGGACAA+TGG | - | chr3_4:21937123-21937142 | None:intergenic | 50.0% | |
| TTCAAGGGTTTCGGTAGGCT+AGG | - | chr3_4:21937130-21937149 | None:intergenic | 50.0% | |
| CTGTGTTCAAGGGTTTCGGT+AGG | - | chr3_4:21937135-21937154 | None:intergenic | 50.0% | |
| GTGGCTGTGTTCAAGGGTTT+CGG | - | chr3_4:21937139-21937158 | None:intergenic | 50.0% | |
| ACAAGGGTGGCTGTGTTCAA+GGG | - | chr3_4:21937145-21937164 | None:intergenic | 50.0% | |
| AACAAGGGTGGCTGTGTTCA+AGG | - | chr3_4:21937146-21937165 | None:intergenic | 50.0% | |
| ! | AAGGTGTCTGGAAACAAGGG+TGG | - | chr3_4:21937158-21937177 | None:intergenic | 50.0% |
| ! | ATTTTGTCAGGTGGAGGTGG+TGG | - | chr3_4:21937187-21937206 | None:intergenic | 50.0% |
| !! | CGGGTGGACTAAATAATGGC+AGG | - | chr3_4:21937249-21937268 | None:intergenic | 50.0% |
| CAGGGCAGTTAAACACCTCA+TGG | + | chr3_4:21937274-21937293 | Msa0494210:intron | 50.0% | |
| !! | GACTAGATAAGGAGCACCCT+TGG | + | chr3_4:21937296-21937315 | Msa0494210:intron | 50.0% |
| TGAAGCCTGGCTCATACACA+TGG | + | chr3_4:21937578-21937597 | Msa0494210:CDS | 50.0% | |
| TGTCTCCATGTGTATGAGCC+AGG | - | chr3_4:21937586-21937605 | None:intergenic | 50.0% | |
| ! | TTTTGTCTGCGTTGAGGTGG+TGG | - | chr3_4:21937616-21937635 | None:intergenic | 50.0% |
| !!! | TGGTTTTGTCTGCGTTGAGG+TGG | - | chr3_4:21937619-21937638 | None:intergenic | 50.0% |
| GCATTATCAGATTCGCTGGC+TGG | + | chr3_4:21937757-21937776 | Msa0494210:CDS | 50.0% | |
| ! | TTATCAGATTCGCTGGCTGG+CGG | + | chr3_4:21937760-21937779 | Msa0494210:CDS | 50.0% |
| ! | GCTCTTGGGATGGATGCTTT+TGG | + | chr3_4:21937871-21937890 | Msa0494210:CDS | 50.0% |
| CCTCATCGTCATCGTCATCA+GGG | - | chr3_4:21937897-21937916 | None:intergenic | 50.0% | |
| TCCTCATCGTCATCGTCATC+AGG | - | chr3_4:21937898-21937917 | None:intergenic | 50.0% | |
| TCGAATGGCTGCTATGCAAG+AGG | + | chr3_4:21937933-21937952 | Msa0494210:CDS | 50.0% | |
| ATGCAAGAGGCCATGGTTTC+TGG | + | chr3_4:21937946-21937965 | Msa0494210:CDS | 50.0% | |
| TGCAAGAGGCCATGGTTTCT+GGG | + | chr3_4:21937947-21937966 | Msa0494210:CDS | 50.0% | |
| GCGCGAGGCGTATGTTTGAA+AGG | + | chr3_4:21933515-21933534 | Msa0494210:CDS | 55.0% | |
| TTCAGATTCTGCTGCGCCTG+TGG | + | chr3_4:21933934-21933953 | Msa0494210:CDS | 55.0% | |
| GTTCCTTCACCTGACAAGCG+TGG | + | chr3_4:21934004-21934023 | Msa0494210:CDS | 55.0% | |
| ACACCACGCTTGTCAGGTGA+AGG | - | chr3_4:21934010-21934029 | None:intergenic | 55.0% | |
| CCCTTTACACCACGCTTGTC+AGG | - | chr3_4:21934016-21934035 | None:intergenic | 55.0% | |
| TAGTGCCCCAACCTCTGCAA+TGG | + | chr3_4:21934411-21934430 | Msa0494210:CDS | 55.0% | |
| ! | TAGTTTGCGGCAAACAGGGC+AGG | - | chr3_4:21934467-21934486 | None:intergenic | 55.0% |
| GCAACTAGCGGCTCTGTATC+AGG | - | chr3_4:21936083-21936102 | None:intergenic | 55.0% | |
| TCGGTAGGCTAGGACAATGG+TGG | - | chr3_4:21937120-21937139 | None:intergenic | 55.0% | |
| !! | TGGTGGTGATGGAAGGTGTC+TGG | - | chr3_4:21937170-21937189 | None:intergenic | 55.0% |
| TAACTGCCCTGTGTTTCGGG+TGG | - | chr3_4:21937265-21937284 | None:intergenic | 55.0% | |
| CATACACATGGAGACACCGC+AGG | + | chr3_4:21937590-21937609 | Msa0494210:CDS | 55.0% | |
| ! | CATGTTGGATGTGCTCGGTG+AGG | + | chr3_4:21937654-21937673 | Msa0494210:CDS | 55.0% |
| TGGCGGTTCAGGTCCTTGTT+TGG | + | chr3_4:21937777-21937796 | Msa0494210:CDS | 55.0% | |
| ! | GGCGGTTCAGGTCCTTGTTT+GGG | + | chr3_4:21937778-21937797 | Msa0494210:CDS | 55.0% |
| TGCTGCTATGCAAGAGGCCA+TGG | + | chr3_4:21937849-21937868 | Msa0494210:CDS | 55.0% | |
| ATGCAAGAGGCCATGGCTCT+TGG | + | chr3_4:21937856-21937875 | Msa0494210:CDS | 55.0% | |
| TGCAAGAGGCCATGGCTCTT+GGG | + | chr3_4:21937857-21937876 | Msa0494210:CDS | 55.0% | |
| AGCATCCATCCCAAGAGCCA+TGG | - | chr3_4:21937869-21937888 | None:intergenic | 55.0% | |
| ! | CCCTGATGACGATGACGATG+AGG | + | chr3_4:21937894-21937913 | Msa0494210:CDS | 55.0% |
| TTTGCTGCTGCCAACTGCCC+CGG | + | chr3_4:21934121-21934140 | Msa0494210:CDS | 60.0% | |
| AGAACATCCACCGGGGCAGT+TGG | - | chr3_4:21934134-21934153 | None:intergenic | 60.0% | |
| ATGCGCGCTAACCACGCATC+TGG | + | chr3_4:21934952-21934971 | Msa0494210:intron | 60.0% | |
| !! | AGTAATGGGCGGAGGGGTGA+TGG | - | chr3_4:21935776-21935795 | None:intergenic | 60.0% |
| GGGGAGGGGCAAACAAGGTT+GGG | - | chr3_4:21937070-21937089 | None:intergenic | 60.0% | |
| AGGGGAGGGGCAAACAAGGT+TGG | - | chr3_4:21937071-21937090 | None:intergenic | 60.0% | |
| GTGTAGGGGAGGGGCAAACA+AGG | - | chr3_4:21937075-21937094 | None:intergenic | 60.0% | |
| !! | GTGGAGGTGGTGGTGATGGA+AGG | - | chr3_4:21937177-21937196 | None:intergenic | 60.0% |
| ! | TCAGGTGGAGGTGGTGGTGA+TGG | - | chr3_4:21937181-21937200 | None:intergenic | 60.0% |
| AGAGGCCATGGCTCTTGGGA+TGG | + | chr3_4:21937861-21937880 | Msa0494210:CDS | 60.0% | |
| GGCTGCTATGCAAGAGGCCA+TGG | + | chr3_4:21937939-21937958 | Msa0494210:CDS | 60.0% | |
| ! | TGCGTTGAGGTGGTGGCCTG+CGG | - | chr3_4:21937609-21937628 | None:intergenic | 65.0% |
| ! | GATTCGCTGGCTGGCGGTTC+AGG | + | chr3_4:21937766-21937785 | Msa0494210:CDS | 65.0% |
| GCTGCTGCCAACTGCCCCGG+TGG | + | chr3_4:21934124-21934143 | Msa0494210:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 21932813 | 21938468 | 21932813 | ID=Msa0494210;Name=Msa0494210 |
| chr3_4 | mRNA | 21932813 | 21938468 | 21932813 | ID=Msa0494210-mRNA-1;Parent=Msa0494210;Name=Msa0494210-mRNA-1;_AED=0.03;_eAED=0.03;_QI=76|1|1|1|0.75|0.8|5|352|482 |
| chr3_4 | exon | 21932813 | 21932899 | 21932813 | ID=Msa0494210-mRNA-1:exon:5533;Parent=Msa0494210-mRNA-1 |
| chr3_4 | exon | 21933499 | 21933583 | 21933499 | ID=Msa0494210-mRNA-1:exon:5534;Parent=Msa0494210-mRNA-1 |
| chr3_4 | exon | 21933836 | 21934572 | 21933836 | ID=Msa0494210-mRNA-1:exon:5535;Parent=Msa0494210-mRNA-1 |
| chr3_4 | exon | 21934676 | 21934745 | 21934676 | ID=Msa0494210-mRNA-1:exon:5536;Parent=Msa0494210-mRNA-1 |
| chr3_4 | exon | 21937571 | 21938468 | 21937571 | ID=Msa0494210-mRNA-1:exon:5537;Parent=Msa0494210-mRNA-1 |
| chr3_4 | five_prime_UTR | 21932813 | 21932888 | 21932813 | ID=Msa0494210-mRNA-1:five_prime_utr;Parent=Msa0494210-mRNA-1 |
| chr3_4 | CDS | 21932889 | 21932899 | 21932889 | ID=Msa0494210-mRNA-1:cds;Parent=Msa0494210-mRNA-1 |
| chr3_4 | CDS | 21933499 | 21933583 | 21933499 | ID=Msa0494210-mRNA-1:cds;Parent=Msa0494210-mRNA-1 |
| chr3_4 | CDS | 21933836 | 21934572 | 21933836 | ID=Msa0494210-mRNA-1:cds;Parent=Msa0494210-mRNA-1 |
| chr3_4 | CDS | 21934676 | 21934745 | 21934676 | ID=Msa0494210-mRNA-1:cds;Parent=Msa0494210-mRNA-1 |
| chr3_4 | CDS | 21937571 | 21938116 | 21937571 | ID=Msa0494210-mRNA-1:cds;Parent=Msa0494210-mRNA-1 |
| chr3_4 | three_prime_UTR | 21938117 | 21938468 | 21938117 | ID=Msa0494210-mRNA-1:three_prime_utr;Parent=Msa0494210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
