Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494400 | XP_003599125.1 | 97.723 | 483 | 8 | 2 | 1 | 482 | 1 | 481 | 0.0 | 979 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494400 | sp|E0X9N4|C3H69_ARATH | 49.593 | 369 | 153 | 9 | 1 | 357 | 1 | 348 | 5.92e-108 | 327 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494400 | G7IWL7 | 97.723 | 483 | 8 | 2 | 1 | 482 | 1 | 481 | 0.0 | 979 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0494400 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0440230 | Msa0494400 | 0.951615 | 1.403607e-109 | -8.615850e-47 |
| Msa0494210 | Msa0494400 | 0.978556 | 4.490552e-146 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494400 | MtrunA17_Chr3g0087881 | 91.304 | 483 | 11 | 2 | 1 | 482 | 1 | 453 | 0.0 | 904 |
| Msa0494400 | MtrunA17_Chr3g0087891 | 52.888 | 329 | 126 | 8 | 1 | 307 | 1 | 322 | 5.86e-106 | 319 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494400 | AT3G08505.1 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 2.74e-99 | 301 |
| Msa0494400 | AT3G08505.2 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 2.74e-99 | 301 |
| Msa0494400 | AT3G08505.3 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 2.74e-99 | 301 |
Find 121 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCAAGAGGCCATGGTTTC+TGG | 0.092914 | 3_4:+22287163 | Msa0494400:CDS |
| AATCTTTCCATAGGGTATTA+TGG | 0.172622 | 3_4:-22287578 | None:intergenic |
| CCTGCATCCTACTGATAAAA+AGG | 0.246259 | 3_4:+22283412 | Msa0494400:CDS |
| GTTTCTGGGATAGATGATTT+TGG | 0.250360 | 3_4:+22287178 | Msa0494400:CDS |
| CAGAAAGGGTCTTGTGCTTA+TGG | 0.259648 | 3_4:+22283068 | Msa0494400:CDS |
| GATTCGCTGGCTGGCGGTTC+AGG | 0.263297 | 3_4:+22286983 | Msa0494400:CDS |
| GTGCTAAAGTAGCATCAAAT+TGG | 0.277566 | 3_4:+22283180 | Msa0494400:CDS |
| ATCTTTCCATAGGGTATTAT+GGG | 0.286860 | 3_4:-22287577 | None:intergenic |
| TAAGCCAAAACTCCTTAAAA+TGG | 0.290440 | 3_4:-22287502 | None:intergenic |
| AGCATCATCTTCAGCATCTA+TGG | 0.292528 | 3_4:+22283127 | Msa0494400:CDS |
| TTTGAGGACTTGTGACAAAA+AGG | 0.300862 | 3_4:+22283448 | Msa0494400:CDS |
| GCTCTTGGGATGGATGCTTT+TGG | 0.301364 | 3_4:+22287088 | Msa0494400:CDS |
| TTGTCATTCCAAGTGGTATT+TGG | 0.301592 | 3_4:+22283711 | Msa0494400:CDS |
| AAGCCATCAGAATGTAAGTT+TGG | 0.301620 | 3_4:+22283548 | Msa0494400:CDS |
| TGGCGGTTCAGGTCCTTGTT+TGG | 0.314287 | 3_4:+22286994 | Msa0494400:CDS |
| GGCGGTTCAGGTCCTTGTTT+GGG | 0.319796 | 3_4:+22286995 | Msa0494400:CDS |
| GGAAATGGAAATTGTCCATT+TGG | 0.321258 | 3_4:+22283921 | Msa0494400:CDS |
| TCCTCATCGTCATCGTCATC+AGG | 0.328553 | 3_4:-22287112 | None:intergenic |
| AGGTGACACAACTTAGTTAA+AGG | 0.354092 | 3_4:-22287383 | None:intergenic |
| ATGCAAGAGGCCATGGCTCT+TGG | 0.356930 | 3_4:+22287073 | Msa0494400:CDS |
| TATGATAGTTTGCGGCAAAC+AGG | 0.366308 | 3_4:-22283686 | None:intergenic |
| CAGAAAGCGTGATCACATTC+TGG | 0.369919 | 3_4:-22283578 | None:intergenic |
| GAAATGGAAATTGTCCATTT+GGG | 0.373127 | 3_4:+22283922 | Msa0494400:CDS |
| GTTTGTCATGTATTCGCAAT+TGG | 0.373825 | 3_4:+22283600 | Msa0494400:CDS |
| CGATTTCCATTGCAGAGGTT+GGG | 0.374375 | 3_4:-22283634 | None:intergenic |
| CCCTTTACACCACGCTTGTC+AGG | 0.379427 | 3_4:-22283230 | None:intergenic |
| AAACTTACATTCTGATGGCT+TGG | 0.395562 | 3_4:-22283546 | None:intergenic |
| CCTGACAAGCGTGGTGTAAA+GGG | 0.396694 | 3_4:+22283230 | Msa0494400:CDS |
| TGCAAGAGGCCATGGTTTCT+GGG | 0.408782 | 3_4:+22287164 | Msa0494400:CDS |
| AACTTACATTCTGATGGCTT+GGG | 0.410250 | 3_4:-22283545 | None:intergenic |
| TGCAAGAGGCCATGGCTCTT+GGG | 0.417374 | 3_4:+22287074 | Msa0494400:CDS |
| AATGATGATGCATTCTCATA+TGG | 0.418914 | 3_4:+22287249 | Msa0494400:CDS |
| TCAATTCCATGAAAATCATC+AGG | 0.425647 | 3_4:-22287202 | None:intergenic |
| ATAATACCCTATGGAAAGAT+TGG | 0.430057 | 3_4:+22287580 | Msa0494400:three_prime_UTR |
| TGATGAATATTAGATTTACT+TGG | 0.430199 | 3_4:+22287321 | Msa0494400:exon |
| ACCTGACAAGCGTGGTGTAA+AGG | 0.433230 | 3_4:+22283229 | Msa0494400:CDS |
| TCTTATGAAAATCATTTGGC+AGG | 0.435477 | 3_4:+22287412 | Msa0494400:three_prime_UTR |
| GATAATGCCATCATCTCAAA+TGG | 0.443626 | 3_4:-22286959 | None:intergenic |
| AAAATCTCACCATGTCCAAC+AGG | 0.444234 | 3_4:+22282095 | Msa0494400:exon |
| AGCCATCAGAATGTAAGTTT+GGG | 0.447348 | 3_4:+22283549 | Msa0494400:CDS |
| CCGATTTCCATTGCAGAGGT+TGG | 0.450187 | 3_4:-22283635 | None:intergenic |
| GATTCAGACGATGAGGATGA+TGG | 0.450779 | 3_4:+22287025 | Msa0494400:CDS |
| CCAACCTCTGCAATGGAAAT+CGG | 0.452415 | 3_4:+22283635 | Msa0494400:CDS |
| TTTGCTCTTATTATCAGAAA+GGG | 0.457240 | 3_4:+22283054 | Msa0494400:CDS |
| ACATGTCATGCATATCGAAA+TGG | 0.462288 | 3_4:-22286853 | None:intergenic |
| TGCTGCTATGCAAGAGGCCA+TGG | 0.469668 | 3_4:+22287066 | Msa0494400:CDS |
| ATTTGCTCTTATTATCAGAA+AGG | 0.469932 | 3_4:+22283053 | Msa0494400:CDS |
| TACCCTATGGAAAGATTGGT+TGG | 0.476893 | 3_4:+22287584 | Msa0494400:three_prime_UTR |
| GGGTTTACAACGCAAGCATC+AGG | 0.478209 | 3_4:+22283250 | Msa0494400:CDS |
| GCATTATCAGATTCGCTGGC+TGG | 0.489570 | 3_4:+22286974 | Msa0494400:CDS |
| TGCTAAAGTAGCATCAAATT+GGG | 0.490703 | 3_4:+22283181 | Msa0494400:CDS |
| AATGGATCCATTTGAGATGA+TGG | 0.491467 | 3_4:+22286952 | Msa0494400:CDS |
| GATTTCCATTGCAGAGGTTG+GGG | 0.493235 | 3_4:-22283633 | None:intergenic |
| TAGAAACAGCTAGCCCCAAA+TGG | 0.494880 | 3_4:-22283936 | None:intergenic |
| GGCTGCTATGCAAGAGGCCA+TGG | 0.495488 | 3_4:+22287156 | Msa0494400:CDS |
| TGGTCTAGCACTACCAGTAC+TGG | 0.497170 | 3_4:-22283294 | None:intergenic |
| TGTCTCCATGTGTATGAGCC+AGG | 0.499940 | 3_4:-22286800 | None:intergenic |
| TCCTCATCGTCTGAATCAAA+AGG | 0.507460 | 3_4:-22287019 | None:intergenic |
| AAACCAACCAATCTTTCCAT+AGG | 0.507522 | 3_4:-22287587 | None:intergenic |
| GAAGGAACCTTTGTAACCTT+CGG | 0.509713 | 3_4:-22283206 | None:intergenic |
| AGGGCAGGTTCTCACTGTAT+TGG | 0.515799 | 3_4:-22283666 | None:intergenic |
| GATGGCATTATCAGATTCGC+TGG | 0.519486 | 3_4:+22286970 | Msa0494400:CDS |
| GTGAATCCCATAATACCCTA+TGG | 0.520258 | 3_4:+22287571 | Msa0494400:three_prime_UTR |
| TAGTTTGCGGCAAACAGGGC+AGG | 0.521329 | 3_4:-22283681 | None:intergenic |
| TGACAAAATATGATAGTTTG+CGG | 0.523339 | 3_4:-22283694 | None:intergenic |
| AGGAAAAGGAAAATCATTTG+AGG | 0.527601 | 3_4:+22283432 | Msa0494400:CDS |
| AAAATCTGAGTCCCTCATGA+TGG | 0.533480 | 3_4:-22286921 | None:intergenic |
| TGGGGCTAGCTGTTTCTACA+AGG | 0.535393 | 3_4:+22283941 | Msa0494400:CDS |
| CTGATGGCTTGGGTTTCGAA+AGG | 0.535450 | 3_4:-22283535 | None:intergenic |
| ATTCAGACGATGAGGATGAT+GGG | 0.536703 | 3_4:+22287026 | Msa0494400:CDS |
| GCGCGAGGCGTATGTTTGAA+AGG | 0.542739 | 3_4:+22282732 | Msa0494400:CDS |
| TTTGCTGCTGCCAACTGCCC+CGG | 0.543300 | 3_4:+22283338 | Msa0494400:CDS |
| TTCAGATTCTGCTGCGCCTG+TGG | 0.544702 | 3_4:+22283151 | Msa0494400:CDS |
| AACCCAAACTTACATTCTGA+TGG | 0.549424 | 3_4:-22283551 | None:intergenic |
| AACCAACCAATCTTTCCATA+GGG | 0.553971 | 3_4:-22287586 | None:intergenic |
| TTTCAGCATACAGTGAAGCC+TGG | 0.555178 | 3_4:+22286782 | Msa0494400:intron |
| ATGATAGTTTGCGGCAAACA+GGG | 0.556192 | 3_4:-22283685 | None:intergenic |
| GATATCAAAGCTGCATCCAT+AGG | 0.558891 | 3_4:-22287226 | None:intergenic |
| TCAAATTGCTGCTATGCAAG+AGG | 0.561508 | 3_4:+22287060 | Msa0494400:CDS |
| AGAACATCCACCGGGGCAGT+TGG | 0.563489 | 3_4:-22283348 | None:intergenic |
| TGGTATTTGGTTTACTACAA+AGG | 0.568402 | 3_4:+22283724 | Msa0494400:CDS |
| GATGCTACTAAACTTTAACT+AGG | 0.569840 | 3_4:-22287614 | None:intergenic |
| AGCATCAAATTGGGTTCCGA+AGG | 0.575611 | 3_4:+22283190 | Msa0494400:CDS |
| TGCGTTGAGGTGGTGGCCTG+CGG | 0.577755 | 3_4:-22286823 | None:intergenic |
| TAGTGCCCCAACCTCTGCAA+TGG | 0.580807 | 3_4:+22283628 | Msa0494400:CDS |
| TTTCGATATGCATGACATGT+TGG | 0.582133 | 3_4:+22286856 | Msa0494400:CDS |
| CCTCATCGTCATCGTCATCA+GGG | 0.582725 | 3_4:-22287111 | None:intergenic |
| TCGAATGGCTGCTATGCAAG+AGG | 0.583412 | 3_4:+22287150 | Msa0494400:CDS |
| AAGATGATGCTTGAGAAGCT+CGG | 0.587317 | 3_4:-22283115 | None:intergenic |
| AGAGGCCATGGCTCTTGGGA+TGG | 0.587677 | 3_4:+22287078 | Msa0494400:CDS |
| GGTCTTGTGCTTATGGTAGT+CGG | 0.588927 | 3_4:+22283075 | Msa0494400:CDS |
| TTGGGTTCCGAAGGTTACAA+AGG | 0.589756 | 3_4:+22283199 | Msa0494400:CDS |
| ACACCACGCTTGTCAGGTGA+AGG | 0.590498 | 3_4:-22283224 | None:intergenic |
| GGTGGATGTTCTCGTATTCA+CGG | 0.596225 | 3_4:+22283359 | Msa0494400:CDS |
| AGCATCCATCCCAAGAGCCA+TGG | 0.600499 | 3_4:-22287083 | None:intergenic |
| ATCATCTATCCCAGAAACCA+TGG | 0.600753 | 3_4:-22287173 | None:intergenic |
| TGAATACGAGAACATCCACC+GGG | 0.602886 | 3_4:-22283356 | None:intergenic |
| ACTTTAGCACTACGAGCCAC+AGG | 0.603612 | 3_4:-22283167 | None:intergenic |
| TTATCAGATTCGCTGGCTGG+CGG | 0.606192 | 3_4:+22286977 | Msa0494400:CDS |
| GCTGCTGCCAACTGCCCCGG+TGG | 0.606750 | 3_4:+22283341 | Msa0494400:CDS |
| TGAAGCCTGGCTCATACACA+TGG | 0.611090 | 3_4:+22286795 | Msa0494400:CDS |
| AAATGGAAATTGTCCATTTG+GGG | 0.614806 | 3_4:+22283923 | Msa0494400:CDS |
| GATGTCGGTGAATCCAGTAC+TGG | 0.616230 | 3_4:+22283281 | Msa0494400:CDS |
| ATAACTACAAGGCAAACTGC+AGG | 0.617185 | 3_4:+22283768 | Msa0494400:CDS |
| CATGACATGTTGGATGTGCT+CGG | 0.619477 | 3_4:+22286866 | Msa0494400:CDS |
| GTAGTAAACCAAATACCACT+TGG | 0.621876 | 3_4:-22283719 | None:intergenic |
| GGAAATTATTGATAACTACA+AGG | 0.622897 | 3_4:+22283757 | Msa0494400:CDS |
| GAATCAAAAGGACCCAAACA+AGG | 0.628395 | 3_4:-22287007 | None:intergenic |
| CATCAGGACTGTACCGATGT+CGG | 0.630976 | 3_4:+22283266 | Msa0494400:CDS |
| AGTACTGGATTCACCGACAT+CGG | 0.632271 | 3_4:-22283279 | None:intergenic |
| GTGAATACGAGAACATCCAC+CGG | 0.635675 | 3_4:-22283357 | None:intergenic |
| GGTGAGGTTGATCTATCAAG+TGG | 0.638628 | 3_4:+22286887 | Msa0494400:CDS |
| ACTACCGATTTCCATTGCAG+AGG | 0.647818 | 3_4:-22283639 | None:intergenic |
| TGAGATTTACCTGTTGGACA+TGG | 0.648362 | 3_4:-22282104 | None:intergenic |
| CATACACATGGAGACACCGC+AGG | 0.651112 | 3_4:+22286807 | Msa0494400:CDS |
| CAATTCCATGAAAATCATCA+GGG | 0.655793 | 3_4:-22287201 | None:intergenic |
| GTTCCTTCACCTGACAAGCG+TGG | 0.673427 | 3_4:+22283221 | Msa0494400:CDS |
| CCCTGATGACGATGACGATG+AGG | 0.676584 | 3_4:+22287111 | Msa0494400:CDS |
| AGAAGAAGATGAAGATTACG+AGG | 0.692698 | 3_4:+22287279 | Msa0494400:CDS |
| CATGTTGGATGTGCTCGGTG+AGG | 0.698239 | 3_4:+22286871 | Msa0494400:CDS |
| GAATACGAGAACATCCACCG+GGG | 0.861616 | 3_4:-22283355 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAAAAATTTAATTAAA+AGG | + | chr3_4:22286557-22286576 | Msa0494400:intron | 0.0% |
| !! | TTATAAAAATTTAATTAAAA+GGG | + | chr3_4:22286558-22286577 | Msa0494400:intron | 0.0% |
| !!! | TTTAGGTTAATTTAATTTTA+GGG | + | chr3_4:22282426-22282445 | Msa0494400:intron | 10.0% |
| !!! | ATTTTTGAAATTTAACTTTT+AGG | + | chr3_4:22282474-22282493 | Msa0494400:intron | 10.0% |
| !!! | TTTTTGAAATTTAACTTTTA+GGG | + | chr3_4:22282475-22282494 | Msa0494400:intron | 10.0% |
| !! | AACAACATAAATAATCAAAT+GGG | - | chr3_4:22282252-22282271 | None:intergenic | 15.0% |
| !! | TAACAACATAAATAATCAAA+TGG | - | chr3_4:22282253-22282272 | None:intergenic | 15.0% |
| !!! | GTTTAGGTTAATTTAATTTT+AGG | + | chr3_4:22282425-22282444 | Msa0494400:intron | 15.0% |
| !!! | TCAAACATATTTTCAAAAAT+GGG | - | chr3_4:22284958-22284977 | None:intergenic | 15.0% |
| !!! | ATCAAACATATTTTCAAAAA+TGG | - | chr3_4:22284959-22284978 | None:intergenic | 15.0% |
| !!! | GTATTATTTTAATCTGAAAT+TGG | - | chr3_4:22285636-22285655 | None:intergenic | 15.0% |
| !! | ATTTCAGATTAAAATAATAC+TGG | + | chr3_4:22285636-22285655 | Msa0494400:intron | 15.0% |
| !!! | TTTTAGAAAAAAATTACCAA+GGG | - | chr3_4:22286532-22286551 | None:intergenic | 15.0% |
| !! | TCTCAAAAACTAATATAAAA+TGG | - | chr3_4:22286719-22286738 | None:intergenic | 15.0% |
| !!! | TTTTATATTAGTTTTTGAGA+TGG | + | chr3_4:22286719-22286738 | Msa0494400:intron | 15.0% |
| !!! | TTGTATGATTTTTGCAATTT+AGG | + | chr3_4:22282203-22282222 | Msa0494400:intron | 20.0% |
| !! | AAGTACATCATACAAAAAAA+AGG | - | chr3_4:22282587-22282606 | None:intergenic | 20.0% |
| !!! | AGTAATTGAAGATTATTTCT+TGG | + | chr3_4:22282635-22282654 | Msa0494400:intron | 20.0% |
| !! | TTAAATCTATGAATTGTTTC+AGG | + | chr3_4:22282694-22282713 | Msa0494400:intron | 20.0% |
| !! | TAAATCTATGAATTGTTTCA+GGG | + | chr3_4:22282695-22282714 | Msa0494400:intron | 20.0% |
| !! | TGTATTTATATTGTTCTTAC+TGG | + | chr3_4:22283010-22283029 | Msa0494400:intron | 20.0% |
| !!! | TTACAAAACAAATTTTCATG+TGG | - | chr3_4:22283317-22283336 | None:intergenic | 20.0% |
| !! | ATCTGAAAGAGAAAAAAAAT+AGG | - | chr3_4:22283875-22283894 | None:intergenic | 20.0% |
| !! | AAATATAAAAGAAAGAGAGA+TGG | - | chr3_4:22283969-22283988 | None:intergenic | 20.0% |
| !!! | TCTTTCTTTTATATTTTCCT+TGG | + | chr3_4:22283973-22283992 | Msa0494400:intron | 20.0% |
| !! | TATTTCTTATTCTTAGAAGT+AGG | + | chr3_4:22284236-22284255 | Msa0494400:intron | 20.0% |
| !!! | CTTTAATTTAGAATATGGAT+TGG | + | chr3_4:22284280-22284299 | Msa0494400:intron | 20.0% |
| !!! | CAAGTTCTTTTACAAATTTT+AGG | - | chr3_4:22284452-22284471 | None:intergenic | 20.0% |
| !!! | AGTTTACATTTTTTTCTTAC+AGG | + | chr3_4:22284501-22284520 | Msa0494400:intron | 20.0% |
| !!! | GTTTACATTTTTTTCTTACA+GGG | + | chr3_4:22284502-22284521 | Msa0494400:intron | 20.0% |
| !!! | TTTACATTTTTTTCTTACAG+GGG | + | chr3_4:22284503-22284522 | Msa0494400:intron | 20.0% |
| !! | ATATAATACATATGTGTGTA+CGG | - | chr3_4:22284567-22284586 | None:intergenic | 20.0% |
| !! | TATTACTACTTGTCTTTAAT+TGG | + | chr3_4:22284687-22284706 | Msa0494400:intron | 20.0% |
| !! | AATCTCATCTAAAAAACTAA+AGG | + | chr3_4:22285360-22285379 | Msa0494400:intron | 20.0% |
| !! | TTACTAGCATAATACATTAT+TGG | + | chr3_4:22285582-22285601 | Msa0494400:intron | 20.0% |
| !! | ATTAAAATAATACTGGTAGT+GGG | + | chr3_4:22285643-22285662 | Msa0494400:intron | 20.0% |
| !!! | AGCACATATATTTTTTCAAA+GGG | + | chr3_4:22285926-22285945 | Msa0494400:intron | 20.0% |
| !!! | ATATTTCTAAACTATCTTGT+TGG | - | chr3_4:22286256-22286275 | None:intergenic | 20.0% |
| !!! | GTTTTAGAAAAAAATTACCA+AGG | - | chr3_4:22286533-22286552 | None:intergenic | 20.0% |
| !! | CCTAAAATACTATGAAATAT+CGG | + | chr3_4:22286628-22286647 | Msa0494400:intron | 20.0% |
| !! | CTAAAATACTATGAAATATC+GGG | + | chr3_4:22286629-22286648 | Msa0494400:intron | 20.0% |
| !! | GTAAATGTAAATATTGTCTT+TGG | + | chr3_4:22286681-22286700 | Msa0494400:intron | 20.0% |
| !! | TAATATAAAATGGATATGCA+AGG | - | chr3_4:22286709-22286728 | None:intergenic | 20.0% |
| !! | TGATGAATATTAGATTTACT+TGG | + | chr3_4:22287321-22287340 | Msa0494400:exon | 20.0% |
| !!! | TCAAAAACTGTTTAAAACTA+GGG | - | chr3_4:22287358-22287377 | None:intergenic | 20.0% |
| !!! | TTCAAAAACTGTTTAAAACT+AGG | - | chr3_4:22287359-22287378 | None:intergenic | 20.0% |
| !!! | CTTTTCTTATGAAAATCATT+TGG | + | chr3_4:22287408-22287427 | Msa0494400:three_prime_UTR | 20.0% |
| !! | TTTGCAATTTAGGTTTCAAA+AGG | + | chr3_4:22282213-22282232 | Msa0494400:intron | 25.0% |
| !! | TTGCAATTTAGGTTTCAAAA+GGG | + | chr3_4:22282214-22282233 | Msa0494400:intron | 25.0% |
| !!! | GATTGTTTTAAGCTATTTTC+TGG | + | chr3_4:22282325-22282344 | Msa0494400:intron | 25.0% |
| !! | AATCAGTTCTTTTTCTGTTT+AGG | + | chr3_4:22282409-22282428 | Msa0494400:intron | 25.0% |
| ! | ATACAAAGTAGAAAACACAT+TGG | - | chr3_4:22282995-22283014 | None:intergenic | 25.0% |
| ! | ATTTGCTCTTATTATCAGAA+AGG | + | chr3_4:22283053-22283072 | Msa0494400:CDS | 25.0% |
| ! | TTTGCTCTTATTATCAGAAA+GGG | + | chr3_4:22283054-22283073 | Msa0494400:CDS | 25.0% |
| ! | TGACAAAATATGATAGTTTG+CGG | - | chr3_4:22283697-22283716 | None:intergenic | 25.0% |
| !! | GGAAATTATTGATAACTACA+AGG | + | chr3_4:22283757-22283776 | Msa0494400:CDS | 25.0% |
| ! | AATTATTAAGCGTGAATGTT+TGG | + | chr3_4:22283829-22283848 | Msa0494400:intron | 25.0% |
| ! | AATTTATATGGCTATATGGA+TGG | - | chr3_4:22284111-22284130 | None:intergenic | 25.0% |
| ! | GGATAATTTATATGGCTATA+TGG | - | chr3_4:22284115-22284134 | None:intergenic | 25.0% |
| ! | ATTGGCATTTATTGAAAGAA+AGG | - | chr3_4:22284356-22284375 | None:intergenic | 25.0% |
| ! | CAAATTTCAACATTCTGTAT+TGG | - | chr3_4:22284374-22284393 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGTCTCATGTAGT+AGG | + | chr3_4:22284620-22284639 | Msa0494400:intron | 25.0% |
| ! | GATCTATAGATCTAGTAAAA+TGG | - | chr3_4:22284762-22284781 | None:intergenic | 25.0% |
| ! | ATGCTGTGGAAATTAAATAT+GGG | - | chr3_4:22284790-22284809 | None:intergenic | 25.0% |
| !! | AGATTGAAGAAACTATTTCT+AGG | - | chr3_4:22284867-22284886 | None:intergenic | 25.0% |
| ! | AGAAATAGTTTCTTCAATCT+TGG | + | chr3_4:22284867-22284886 | Msa0494400:intron | 25.0% |
| ! | ACTAGTATTTAGTGGTTTAT+AGG | - | chr3_4:22285016-22285035 | None:intergenic | 25.0% |
| ! | ATTGATCAACTAGTATTTAG+TGG | - | chr3_4:22285024-22285043 | None:intergenic | 25.0% |
| ! | AAATACTAGTTGATCAATAG+AGG | + | chr3_4:22285026-22285045 | Msa0494400:intron | 25.0% |
| ! | AATACTAGTTGATCAATAGA+GGG | + | chr3_4:22285027-22285046 | Msa0494400:intron | 25.0% |
| ! | ATCACGAATATAAACCATAT+TGG | - | chr3_4:22285089-22285108 | None:intergenic | 25.0% |
| !! | TGATTTGGACATTGTAAATA+TGG | - | chr3_4:22285246-22285265 | None:intergenic | 25.0% |
| !!! | GATAATTTTGATGGTTTCTT+TGG | - | chr3_4:22285439-22285458 | None:intergenic | 25.0% |
| ! | ACCATCAAAATTATCTTCAA+AGG | + | chr3_4:22285444-22285463 | Msa0494400:intron | 25.0% |
| !!! | TCCTTTGAAGATAATTTTGA+TGG | - | chr3_4:22285448-22285467 | None:intergenic | 25.0% |
| ! | TATTATGCTAGTAACCTATA+GGG | - | chr3_4:22285576-22285595 | None:intergenic | 25.0% |
| ! | ATACATTATTGGAATAATGC+TGG | + | chr3_4:22285593-22285612 | Msa0494400:intron | 25.0% |
| ! | GATTAAAATAATACTGGTAG+TGG | + | chr3_4:22285642-22285661 | Msa0494400:intron | 25.0% |
| !!! | GAGCACATATATTTTTTCAA+AGG | + | chr3_4:22285925-22285944 | Msa0494400:intron | 25.0% |
| !! | TGTTTATTACGTAGTGTTTT+TGG | + | chr3_4:22286210-22286229 | Msa0494400:intron | 25.0% |
| !! | TACAAAGTTATGATTTTGTC+AGG | - | chr3_4:22286416-22286435 | None:intergenic | 25.0% |
| ! | TTAAAAGGGGAAAACAAATT+AGG | + | chr3_4:22286572-22286591 | Msa0494400:intron | 25.0% |
| !! | CCGATATTTCATAGTATTTT+AGG | - | chr3_4:22286631-22286650 | None:intergenic | 25.0% |
| !! | AGAATTTTATTCCATCATGA+GGG | + | chr3_4:22286910-22286929 | Msa0494400:CDS | 25.0% |
| !!! | AGAGTTTAATGTTTTTCGAA+TGG | + | chr3_4:22287135-22287154 | Msa0494400:CDS | 25.0% |
| !! | TGATTTTCATAAGAAAAGAG+AGG | - | chr3_4:22287406-22287425 | None:intergenic | 25.0% |
| GAAAAACGATCGAAGAAAAA+AGG | - | chr3_4:22282134-22282153 | None:intergenic | 30.0% | |
| ! | TGCAATTTAGGTTTCAAAAG+GGG | + | chr3_4:22282215-22282234 | Msa0494400:intron | 30.0% |
| TCTGATGAGAAAAATCACAT+TGG | - | chr3_4:22282761-22282780 | None:intergenic | 30.0% | |
| ! | TGATTTTTCTCATCAGAGAA+AGG | + | chr3_4:22282764-22282783 | Msa0494400:CDS | 30.0% |
| TATCACTAATGTTGATGTGT+CGG | + | chr3_4:22282929-22282948 | Msa0494400:intron | 30.0% | |
| TGCTAAAGTAGCATCAAATT+GGG | + | chr3_4:22283181-22283200 | Msa0494400:CDS | 30.0% | |
| TCCTACTGATAAAAAGGAAA+AGG | + | chr3_4:22283418-22283437 | Msa0494400:CDS | 30.0% | |
| ! | TCCTTTTCCTTTTTATCAGT+AGG | - | chr3_4:22283422-22283441 | None:intergenic | 30.0% |
| AGGAAAAGGAAAATCATTTG+AGG | + | chr3_4:22283432-22283451 | Msa0494400:CDS | 30.0% | |
| ! | TCATATTTTGTCATTCCAAG+TGG | + | chr3_4:22283704-22283723 | Msa0494400:CDS | 30.0% |
| ! | TGGTATTTGGTTTACTACAA+AGG | + | chr3_4:22283724-22283743 | Msa0494400:CDS | 30.0% |
| TACTACAAAGGAAGAAAAAC+AGG | + | chr3_4:22283736-22283755 | Msa0494400:CDS | 30.0% | |
| !!! | GATTGTAAACATTTTGACTC+TGG | + | chr3_4:22283900-22283919 | Msa0494400:CDS | 30.0% |
| !!! | AAACATTTTGACTCTGGAAA+TGG | + | chr3_4:22283906-22283925 | Msa0494400:CDS | 30.0% |
| GAAATGGAAATTGTCCATTT+GGG | + | chr3_4:22283922-22283941 | Msa0494400:CDS | 30.0% | |
| AAATGGAAATTGTCCATTTG+GGG | + | chr3_4:22283923-22283942 | Msa0494400:CDS | 30.0% | |
| AGAACTAATCCAACAAAGAA+AGG | - | chr3_4:22284082-22284101 | None:intergenic | 30.0% | |
| AACAACATCTACAAGGATTT+GGG | - | chr3_4:22284144-22284163 | None:intergenic | 30.0% | |
| ATAAGTCAACAACATCTACA+AGG | - | chr3_4:22284151-22284170 | None:intergenic | 30.0% | |
| ! | TAGGTTTCTTTCCCTTTTAT+GGG | + | chr3_4:22284255-22284274 | Msa0494400:intron | 30.0% |
| AAATTAAAGCCCCCATAAAA+GGG | - | chr3_4:22284269-22284288 | None:intergenic | 30.0% | |
| TAAATTAAAGCCCCCATAAA+AGG | - | chr3_4:22284270-22284289 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTCTTACAGGGGAT+GGG | + | chr3_4:22284508-22284527 | Msa0494400:intron | 30.0% |
| TGCTGTGGAAATTAAATATG+GGG | - | chr3_4:22284789-22284808 | None:intergenic | 30.0% | |
| GATGCTGTGGAAATTAAATA+TGG | - | chr3_4:22284791-22284810 | None:intergenic | 30.0% | |
| TTCAAAAGCTCAAACAGATT+GGG | - | chr3_4:22284842-22284861 | None:intergenic | 30.0% | |
| ATTCAAAAGCTCAAACAGAT+TGG | - | chr3_4:22284843-22284862 | None:intergenic | 30.0% | |
| ATAGTTTCTTCAATCTTGGT+TGG | + | chr3_4:22284871-22284890 | Msa0494400:intron | 30.0% | |
| TAGTGGTTTATAGGAGTAAT+GGG | - | chr3_4:22285007-22285026 | None:intergenic | 30.0% | |
| TTAGTGGTTTATAGGAGTAA+TGG | - | chr3_4:22285008-22285027 | None:intergenic | 30.0% | |
| TAGAGGGAAAATGAGTTTAA+AGG | + | chr3_4:22285043-22285062 | Msa0494400:intron | 30.0% | |
| TTACTACACATTGGAATACA+TGG | - | chr3_4:22285179-22285198 | None:intergenic | 30.0% | |
| TATTCCAATGTGTAGTAACT+AGG | + | chr3_4:22285181-22285200 | Msa0494400:intron | 30.0% | |
| ! | CTTAATCCTAATCACTGATT+TGG | - | chr3_4:22285261-22285280 | None:intergenic | 30.0% |
| CAAATCAGTGATTAGGATTA+AGG | + | chr3_4:22285259-22285278 | Msa0494400:intron | 30.0% | |
| ATGATAGAATGTTGTGTAAG+TGG | - | chr3_4:22285338-22285357 | None:intergenic | 30.0% | |
| ! | TTGATGGTTTCTTTGGATTT+GGG | - | chr3_4:22285432-22285451 | None:intergenic | 30.0% |
| ! | TTTGATGGTTTCTTTGGATT+TGG | - | chr3_4:22285433-22285452 | None:intergenic | 30.0% |
| ! | AGTCAGCCATAAAATTTTGT+AGG | + | chr3_4:22285514-22285533 | Msa0494400:intron | 30.0% |
| !! | ACAAATTTTGGGTGACTATA+GGG | - | chr3_4:22285545-22285564 | None:intergenic | 30.0% |
| !! | TACAAATTTTGGGTGACTAT+AGG | - | chr3_4:22285546-22285565 | None:intergenic | 30.0% |
| TATAGTCACCCAAAATTTGT+AGG | + | chr3_4:22285545-22285564 | Msa0494400:intron | 30.0% | |
| GTATTATGCTAGTAACCTAT+AGG | - | chr3_4:22285577-22285596 | None:intergenic | 30.0% | |
| ATTACCGTTTAGTATTGTAG+TGG | + | chr3_4:22285697-22285716 | Msa0494400:intron | 30.0% | |
| CTAACCACTACAATACTAAA+CGG | - | chr3_4:22285704-22285723 | None:intergenic | 30.0% | |
| TTAGGTTATGGTAGTTTCTA+GGG | + | chr3_4:22285720-22285739 | Msa0494400:intron | 30.0% | |
| !!! | AAGGAGTTTTAAGAAGTTCA+AGG | - | chr3_4:22285752-22285771 | None:intergenic | 30.0% |
| !! | GCAATTTGTTAATCTGAATG+TGG | - | chr3_4:22285863-22285882 | None:intergenic | 30.0% |
| !!! | ATTTTTTCAAAGGGTGAGTA+TGG | + | chr3_4:22285935-22285954 | Msa0494400:intron | 30.0% |
| TGGAAACAAGTACTATCATA+TGG | + | chr3_4:22285955-22285974 | Msa0494400:intron | 30.0% | |
| AACAGAAAAAAGACCAAAGA+GGG | + | chr3_4:22286025-22286044 | Msa0494400:intron | 30.0% | |
| CACTACGTAATAAACACAAT+AGG | - | chr3_4:22286206-22286225 | None:intergenic | 30.0% | |
| ! | AAAGTTATGATTTTGTCAGG+TGG | - | chr3_4:22286413-22286432 | None:intergenic | 30.0% |
| ! | ACTTTTGAACATAGACACTA+AGG | - | chr3_4:22286598-22286617 | None:intergenic | 30.0% |
| ! | GAGAATTTTATTCCATCATG+AGG | + | chr3_4:22286909-22286928 | Msa0494400:CDS | 30.0% |
| CAATTCCATGAAAATCATCA+GGG | - | chr3_4:22287204-22287223 | None:intergenic | 30.0% | |
| TCAATTCCATGAAAATCATC+AGG | - | chr3_4:22287205-22287224 | None:intergenic | 30.0% | |
| ! | TTTTCATGGAATTGATCCTA+TGG | + | chr3_4:22287210-22287229 | Msa0494400:CDS | 30.0% |
| ! | AATGATGATGCATTCTCATA+TGG | + | chr3_4:22287249-22287268 | Msa0494400:CDS | 30.0% |
| TCTTATGAAAATCATTTGGC+AGG | + | chr3_4:22287412-22287431 | Msa0494400:three_prime_UTR | 30.0% | |
| !!! | AGATCATATGCCATTTTTGA+AGG | + | chr3_4:22287471-22287490 | Msa0494400:three_prime_UTR | 30.0% |
| TAAGCCAAAACTCCTTAAAA+TGG | - | chr3_4:22287505-22287524 | None:intergenic | 30.0% | |
| !!! | TTTTAAGGAGTTTTGGCTTA+AGG | + | chr3_4:22287505-22287524 | Msa0494400:three_prime_UTR | 30.0% |
| !!! | TTTAAGGAGTTTTGGCTTAA+GGG | + | chr3_4:22287506-22287525 | Msa0494400:three_prime_UTR | 30.0% |
| ! | ATCTTTCCATAGGGTATTAT+GGG | - | chr3_4:22287580-22287599 | None:intergenic | 30.0% |
| ! | AATCTTTCCATAGGGTATTA+TGG | - | chr3_4:22287581-22287600 | None:intergenic | 30.0% |
| ATAATACCCTATGGAAAGAT+TGG | + | chr3_4:22287580-22287599 | Msa0494400:three_prime_UTR | 30.0% | |
| GATGCTACTAAACTTTAACT+AGG | - | chr3_4:22287617-22287636 | None:intergenic | 30.0% | |
| !! | ACATGGTGAGATTTTAGGAA+CGG | - | chr3_4:22282090-22282109 | None:intergenic | 35.0% |
| CATTGGTCAGTAACAGTAAA+TGG | - | chr3_4:22282823-22282842 | None:intergenic | 35.0% | |
| !! | ATCGGTGCTACAAAATACAT+TGG | - | chr3_4:22282840-22282859 | None:intergenic | 35.0% |
| CAAAGTAGAAAACACATTGG+CGG | - | chr3_4:22282992-22283011 | None:intergenic | 35.0% | |
| GTGCTAAAGTAGCATCAAAT+TGG | + | chr3_4:22283180-22283199 | Msa0494400:CDS | 35.0% | |
| TTTGAGGACTTGTGACAAAA+AGG | + | chr3_4:22283448-22283467 | Msa0494400:CDS | 35.0% | |
| !! | CAAAAAGGAAAAGTACCTTC+TGG | + | chr3_4:22283463-22283482 | Msa0494400:CDS | 35.0% |
| AACTTACATTCTGATGGCTT+GGG | - | chr3_4:22283548-22283567 | None:intergenic | 35.0% | |
| AAACTTACATTCTGATGGCT+TGG | - | chr3_4:22283549-22283568 | None:intergenic | 35.0% | |
| AAGCCATCAGAATGTAAGTT+TGG | + | chr3_4:22283548-22283567 | Msa0494400:CDS | 35.0% | |
| AGCCATCAGAATGTAAGTTT+GGG | + | chr3_4:22283549-22283568 | Msa0494400:CDS | 35.0% | |
| AACCCAAACTTACATTCTGA+TGG | - | chr3_4:22283554-22283573 | None:intergenic | 35.0% | |
| GTTTGTCATGTATTCGCAAT+TGG | + | chr3_4:22283600-22283619 | Msa0494400:CDS | 35.0% | |
| TTGTCATTCCAAGTGGTATT+TGG | + | chr3_4:22283711-22283730 | Msa0494400:CDS | 35.0% | |
| GTAGTAAACCAAATACCACT+TGG | - | chr3_4:22283722-22283741 | None:intergenic | 35.0% | |
| ATTCTTGCAAGCATACACAA+CGG | - | chr3_4:22283812-22283831 | None:intergenic | 35.0% | |
| GGAAATGGAAATTGTCCATT+TGG | + | chr3_4:22283921-22283940 | Msa0494400:CDS | 35.0% | |
| ATGATAATCAAGCTTGACCA+AGG | - | chr3_4:22283993-22284012 | None:intergenic | 35.0% | |
| CAACAAAGAAAGGAAAAGCA+TGG | - | chr3_4:22284072-22284091 | None:intergenic | 35.0% | |
| ! | CATGCTTTTCCTTTCTTTGT+TGG | + | chr3_4:22284070-22284089 | Msa0494400:intron | 35.0% |
| GGGAGAACGGATAATTTATA+TGG | - | chr3_4:22284123-22284142 | None:intergenic | 35.0% | |
| ACAACATCTACAAGGATTTG+GGG | - | chr3_4:22284143-22284162 | None:intergenic | 35.0% | |
| CAACAACATCTACAAGGATT+TGG | - | chr3_4:22284145-22284164 | None:intergenic | 35.0% | |
| GATTATTTAATCCAGATGCG+TGG | - | chr3_4:22284183-22284202 | None:intergenic | 35.0% | |
| ! | GTAGGTTTCTTTCCCTTTTA+TGG | + | chr3_4:22284254-22284273 | Msa0494400:intron | 35.0% |
| ! | AGGTTTCTTTCCCTTTTATG+GGG | + | chr3_4:22284256-22284275 | Msa0494400:intron | 35.0% |
| ! | GGGGGCTTTAATTTAGAATA+TGG | + | chr3_4:22284275-22284294 | Msa0494400:intron | 35.0% |
| GTGAATATCTTTCACCTCAT+AGG | + | chr3_4:22284396-22284415 | Msa0494400:intron | 35.0% | |
| !!! | CATTTTTTTCTTACAGGGGA+TGG | + | chr3_4:22284507-22284526 | Msa0494400:intron | 35.0% |
| ! | GTGAATGATTGTTGTTCAGT+TGG | - | chr3_4:22284545-22284564 | None:intergenic | 35.0% |
| TGAAACTACTTGGAAGATCT+TGG | - | chr3_4:22284724-22284743 | None:intergenic | 35.0% | |
| GTAAAATGGTGAATGTGTCA+AGG | - | chr3_4:22284748-22284767 | None:intergenic | 35.0% | |
| AGATGAAATAAGAGATGCTG+TGG | - | chr3_4:22284804-22284823 | None:intergenic | 35.0% | |
| TTGCGTTAACACAACCAATA+TGG | + | chr3_4:22285072-22285091 | Msa0494400:intron | 35.0% | |
| GAAAGTAGGGAATGTAATTG+AGG | - | chr3_4:22285150-22285169 | None:intergenic | 35.0% | |
| TACATGGAGCATAGAAAGTA+GGG | - | chr3_4:22285163-22285182 | None:intergenic | 35.0% | |
| ATACATGGAGCATAGAAAGT+AGG | - | chr3_4:22285164-22285183 | None:intergenic | 35.0% | |
| TTCTCCTAGTTACTACACAT+TGG | - | chr3_4:22285188-22285207 | None:intergenic | 35.0% | |
| CAATGTCCAAATCAGTGATT+AGG | + | chr3_4:22285252-22285271 | Msa0494400:intron | 35.0% | |
| GAATGTTGTGTAAGTGGTAA+AGG | - | chr3_4:22285332-22285351 | None:intergenic | 35.0% | |
| ! | TTAAGCTTTTACCCACCATA+TGG | + | chr3_4:22285468-22285487 | Msa0494400:intron | 35.0% |
| ! | TAAGCTTTTACCCACCATAT+GGG | + | chr3_4:22285469-22285488 | Msa0494400:intron | 35.0% |
| !! | GTCTACTAGACTTGTTAATG+AGG | + | chr3_4:22285491-22285510 | Msa0494400:intron | 35.0% |
| ! | GCCATAAAATTTTGTAGGCA+TGG | + | chr3_4:22285519-22285538 | Msa0494400:intron | 35.0% |
| ! | GCCATGCCTACAAAATTTTA+TGG | - | chr3_4:22285523-22285542 | None:intergenic | 35.0% |
| TCACCCAAAATTTGTAGGTA+TGG | + | chr3_4:22285550-22285569 | Msa0494400:intron | 35.0% | |
| CGTTTAGTATTGTAGTGGTT+AGG | + | chr3_4:22285702-22285721 | Msa0494400:intron | 35.0% | |
| GTATTGTAGTGGTTAGGTTA+TGG | + | chr3_4:22285708-22285727 | Msa0494400:intron | 35.0% | |
| GTTAGGTTATGGTAGTTTCT+AGG | + | chr3_4:22285719-22285738 | Msa0494400:intron | 35.0% | |
| !!! | GACACTCTTGTTTTTCCATT+TGG | + | chr3_4:22285814-22285833 | Msa0494400:intron | 35.0% |
| GATGTATTCGTTTGACCAAA+TGG | - | chr3_4:22285832-22285851 | None:intergenic | 35.0% | |
| TGAAGTGAAGACAATAGGAA+GGG | - | chr3_4:22285998-22286017 | None:intergenic | 35.0% | |
| ATGAAGTGAAGACAATAGGA+AGG | - | chr3_4:22285999-22286018 | None:intergenic | 35.0% | |
| TGTCATGAAGTGAAGACAAT+AGG | - | chr3_4:22286003-22286022 | None:intergenic | 35.0% | |
| GAACAGAAAAAAGACCAAAG+AGG | + | chr3_4:22286024-22286043 | Msa0494400:intron | 35.0% | |
| ACAGAAAAAAGACCAAAGAG+GGG | + | chr3_4:22286026-22286045 | Msa0494400:intron | 35.0% | |
| ! | TTTTGTGATCCATGAGTTGT+TGG | + | chr3_4:22286070-22286089 | Msa0494400:intron | 35.0% |
| TTGGCTGAAAATGATACTAG+AGG | + | chr3_4:22286093-22286112 | Msa0494400:intron | 35.0% | |
| !!! | TACGTAGTGTTTTTGGTGAT+AGG | + | chr3_4:22286217-22286236 | Msa0494400:intron | 35.0% |
| !!! | ACGTAGTGTTTTTGGTGATA+GGG | + | chr3_4:22286218-22286237 | Msa0494400:intron | 35.0% |
| ACATGTCATGCATATCGAAA+TGG | - | chr3_4:22286856-22286875 | None:intergenic | 35.0% | |
| TTTCGATATGCATGACATGT+TGG | + | chr3_4:22286856-22286875 | Msa0494400:CDS | 35.0% | |
| !!! | AGGGACTCAGATTTTTTTGA+GGG | + | chr3_4:22286929-22286948 | Msa0494400:CDS | 35.0% |
| !!! | CTCAGATTTTTTTGAGGGAA+TGG | + | chr3_4:22286934-22286953 | Msa0494400:CDS | 35.0% |
| ! | AATGGATCCATTTGAGATGA+TGG | + | chr3_4:22286952-22286971 | Msa0494400:CDS | 35.0% |
| GATAATGCCATCATCTCAAA+TGG | - | chr3_4:22286962-22286981 | None:intergenic | 35.0% | |
| !!! | GTTTCTGGGATAGATGATTT+TGG | + | chr3_4:22287178-22287197 | Msa0494400:CDS | 35.0% |
| AGAAGAAGATGAAGATTACG+AGG | + | chr3_4:22287279-22287298 | Msa0494400:CDS | 35.0% | |
| AGGTGACACAACTTAGTTAA+AGG | - | chr3_4:22287386-22287405 | None:intergenic | 35.0% | |
| !!! | AAGGTCATGTTGCCATTTTA+AGG | + | chr3_4:22287490-22287509 | Msa0494400:three_prime_UTR | 35.0% |
| !!! | GTTGCCATTTTAAGGAGTTT+TGG | + | chr3_4:22287498-22287517 | Msa0494400:three_prime_UTR | 35.0% |
| !!! | TTGGCTTAAGGGTTTTGTTT+TGG | + | chr3_4:22287517-22287536 | Msa0494400:three_prime_UTR | 35.0% |
| !!! | GGGTTTTGTTTTGGATTTTG+TGG | + | chr3_4:22287526-22287545 | Msa0494400:three_prime_UTR | 35.0% |
| AACCAACCAATCTTTCCATA+GGG | - | chr3_4:22287589-22287608 | None:intergenic | 35.0% | |
| AAACCAACCAATCTTTCCAT+AGG | - | chr3_4:22287590-22287609 | None:intergenic | 35.0% | |
| ! | GTTGGACATGGTGAGATTTT+AGG | - | chr3_4:22282095-22282114 | None:intergenic | 40.0% |
| AAAATCTCACCATGTCCAAC+AGG | + | chr3_4:22282095-22282114 | Msa0494400:exon | 40.0% | |
| TGAGATTTACCTGTTGGACA+TGG | - | chr3_4:22282107-22282126 | None:intergenic | 40.0% | |
| !! | GGTTGATGAGATTTACCTGT+TGG | - | chr3_4:22282113-22282132 | None:intergenic | 40.0% |
| AAGATGATGCTTGAGAAGCT+CGG | - | chr3_4:22283118-22283137 | None:intergenic | 40.0% | |
| AGCATCATCTTCAGCATCTA+TGG | + | chr3_4:22283127-22283146 | Msa0494400:CDS | 40.0% | |
| GAAGGAACCTTTGTAACCTT+CGG | - | chr3_4:22283209-22283228 | None:intergenic | 40.0% | |
| ! | CCTTTTTATCAGTAGGATGC+AGG | - | chr3_4:22283415-22283434 | None:intergenic | 40.0% |
| CCTGCATCCTACTGATAAAA+AGG | + | chr3_4:22283412-22283431 | Msa0494400:CDS | 40.0% | |
| ! | ATGATAGTTTGCGGCAAACA+GGG | - | chr3_4:22283688-22283707 | None:intergenic | 40.0% |
| ! | TATGATAGTTTGCGGCAAAC+AGG | - | chr3_4:22283689-22283708 | None:intergenic | 40.0% |
| ATAACTACAAGGCAAACTGC+AGG | + | chr3_4:22283768-22283787 | Msa0494400:CDS | 40.0% | |
| ! | GGTTTCTTTCCCTTTTATGG+GGG | + | chr3_4:22284257-22284276 | Msa0494400:intron | 40.0% |
| CTCTACATCATCTTCCTATG+AGG | - | chr3_4:22284413-22284432 | None:intergenic | 40.0% | |
| CTCATAGGAAGATGATGTAG+AGG | + | chr3_4:22284411-22284430 | Msa0494400:intron | 40.0% | |
| ! | GTAGTAGGCAAGTGGTATTT+TGG | + | chr3_4:22284635-22284654 | Msa0494400:intron | 40.0% |
| !! | GCAAGTGGTATTTTGGACTT+TGG | + | chr3_4:22284642-22284661 | Msa0494400:intron | 40.0% |
| GTGTCAAGGATGAAACTACT+TGG | - | chr3_4:22284734-22284753 | None:intergenic | 40.0% | |
| ! | TGGTTTATAGGAGTAATGGG+CGG | - | chr3_4:22285004-22285023 | None:intergenic | 40.0% |
| CAATGCGTCATAACTCAAAG+AGG | - | chr3_4:22285389-22285408 | None:intergenic | 40.0% | |
| TGAGTTATGACGCATTGCAT+TGG | + | chr3_4:22285392-22285411 | Msa0494400:intron | 40.0% | |
| ACAAGTCTAGTAGACCCATA+TGG | - | chr3_4:22285486-22285505 | None:intergenic | 40.0% | |
| ! | GGGCCATACCTACAAATTTT+GGG | - | chr3_4:22285556-22285575 | None:intergenic | 40.0% |
| ! | AGGGCCATACCTACAAATTT+TGG | - | chr3_4:22285557-22285576 | None:intergenic | 40.0% |
| ATTTGTAGGTATGGCCCTAT+AGG | + | chr3_4:22285559-22285578 | Msa0494400:intron | 40.0% | |
| ACCAACTGAGCTACTTACTT+GGG | + | chr3_4:22285788-22285807 | Msa0494400:intron | 40.0% | |
| ! | ACACTTGTAGCTTTACACGT+TGG | - | chr3_4:22285892-22285911 | None:intergenic | 40.0% |
| AATAGGAAGGGTCTGGATAT+AGG | - | chr3_4:22285986-22286005 | None:intergenic | 40.0% | |
| !! | TAACACTGATTTCCCCTCTT+TGG | - | chr3_4:22286041-22286060 | None:intergenic | 40.0% |
| ACTCATTCTCAGATCACTCA+TGG | - | chr3_4:22286138-22286157 | None:intergenic | 40.0% | |
| AAGCATCAACAACAGTGTAG+GGG | - | chr3_4:22286306-22286325 | None:intergenic | 40.0% | |
| CAAGCATCAACAACAGTGTA+GGG | - | chr3_4:22286307-22286326 | None:intergenic | 40.0% | |
| ACAAGCATCAACAACAGTGT+AGG | - | chr3_4:22286308-22286327 | None:intergenic | 40.0% | |
| ! | GTTATGATTTTGTCAGGTGG+AGG | - | chr3_4:22286410-22286429 | None:intergenic | 40.0% |
| !! | GTTTCGGGTGGACTAAATAA+TGG | - | chr3_4:22286470-22286489 | None:intergenic | 40.0% |
| TGTTTAACTGCCCTGTGTTT+CGG | - | chr3_4:22286486-22286505 | None:intergenic | 40.0% | |
| !! | AACACCTCATGGACTAGATA+AGG | + | chr3_4:22286502-22286521 | Msa0494400:intron | 40.0% |
| !!! | AAATGGTTTTGTCTGCGTTG+AGG | - | chr3_4:22286839-22286858 | None:intergenic | 40.0% |
| AAAATCTGAGTCCCTCATGA+TGG | - | chr3_4:22286924-22286943 | None:intergenic | 40.0% | |
| !!! | GAGGGACTCAGATTTTTTTG+AGG | + | chr3_4:22286928-22286947 | Msa0494400:CDS | 40.0% |
| GAATCAAAAGGACCCAAACA+AGG | - | chr3_4:22287010-22287029 | None:intergenic | 40.0% | |
| TCAAATTGCTGCTATGCAAG+AGG | + | chr3_4:22287060-22287079 | Msa0494400:CDS | 40.0% | |
| ATCATCTATCCCAGAAACCA+TGG | - | chr3_4:22287176-22287195 | None:intergenic | 40.0% | |
| ! | TTTGGCCCTGATGATTTTCA+TGG | + | chr3_4:22287196-22287215 | Msa0494400:CDS | 40.0% |
| GATATCAAAGCTGCATCCAT+AGG | - | chr3_4:22287229-22287248 | None:intergenic | 40.0% | |
| GGCAACATGACCTTCAAAAA+TGG | - | chr3_4:22287484-22287503 | None:intergenic | 40.0% | |
| GTGAATCCCATAATACCCTA+TGG | + | chr3_4:22287571-22287590 | Msa0494400:three_prime_UTR | 40.0% | |
| TACCCTATGGAAAGATTGGT+TGG | + | chr3_4:22287584-22287603 | Msa0494400:three_prime_UTR | 40.0% | |
| !! | GTTTGCAAGTTTTATGCGCG+AGG | + | chr3_4:22282717-22282736 | Msa0494400:CDS | 45.0% |
| ! | GTGTCGGTGATTAGAGGTAT+CGG | - | chr3_4:22282858-22282877 | None:intergenic | 45.0% |
| GAGTCAATGTCGTGTTGTGT+CGG | - | chr3_4:22282874-22282893 | None:intergenic | 45.0% | |
| GTGAAACACTGACACCAGAT+AGG | - | chr3_4:22282970-22282989 | None:intergenic | 45.0% | |
| ! | CAGAAAGGGTCTTGTGCTTA+TGG | + | chr3_4:22283068-22283087 | Msa0494400:CDS | 45.0% |
| ! | GGTCTTGTGCTTATGGTAGT+CGG | + | chr3_4:22283075-22283094 | Msa0494400:CDS | 45.0% |
| AGCATCAAATTGGGTTCCGA+AGG | + | chr3_4:22283190-22283209 | Msa0494400:CDS | 45.0% | |
| TTGGGTTCCGAAGGTTACAA+AGG | + | chr3_4:22283199-22283218 | Msa0494400:CDS | 45.0% | |
| ! | AGTACTGGATTCACCGACAT+CGG | - | chr3_4:22283282-22283301 | None:intergenic | 45.0% |
| TGAATACGAGAACATCCACC+GGG | - | chr3_4:22283359-22283378 | None:intergenic | 45.0% | |
| GTGAATACGAGAACATCCAC+CGG | - | chr3_4:22283360-22283379 | None:intergenic | 45.0% | |
| GGTGGATGTTCTCGTATTCA+CGG | + | chr3_4:22283359-22283378 | Msa0494400:CDS | 45.0% | |
| !!! | CGCTGTTTTTCAAAGCCAGA+AGG | - | chr3_4:22283481-22283500 | None:intergenic | 45.0% |
| ! | CAGAAAGCGTGATCACATTC+TGG | - | chr3_4:22283581-22283600 | None:intergenic | 45.0% |
| GATTTCCATTGCAGAGGTTG+GGG | - | chr3_4:22283636-22283655 | None:intergenic | 45.0% | |
| CGATTTCCATTGCAGAGGTT+GGG | - | chr3_4:22283637-22283656 | None:intergenic | 45.0% | |
| CCAACCTCTGCAATGGAAAT+CGG | + | chr3_4:22283635-22283654 | Msa0494400:CDS | 45.0% | |
| !! | ACTACCGATTTCCATTGCAG+AGG | - | chr3_4:22283642-22283661 | None:intergenic | 45.0% |
| TAGAAACAGCTAGCCCCAAA+TGG | - | chr3_4:22283939-22283958 | None:intergenic | 45.0% | |
| CTACAAGGATTTGGGGAGAA+CGG | - | chr3_4:22284136-22284155 | None:intergenic | 45.0% | |
| GGACAAGTTGCTAAAGCTTG+TGG | - | chr3_4:22284335-22284354 | None:intergenic | 45.0% | |
| TGTCTCATGTAGTAGGCAAG+TGG | + | chr3_4:22284627-22284646 | Msa0494400:intron | 45.0% | |
| TTGGAAGATCTTGGAGACGA+TGG | - | chr3_4:22284715-22284734 | None:intergenic | 45.0% | |
| TGCAACATACACTAGCCAGT+AGG | - | chr3_4:22284899-22284918 | None:intergenic | 45.0% | |
| !! | TTATAGGAGTAATGGGCGGA+GGG | - | chr3_4:22285000-22285019 | None:intergenic | 45.0% |
| !! | TTTATAGGAGTAATGGGCGG+AGG | - | chr3_4:22285001-22285020 | None:intergenic | 45.0% |
| AGGACAATGCTAGCAACTAG+CGG | - | chr3_4:22285312-22285331 | None:intergenic | 45.0% | |
| GTCTAGTAGACCCATATGGT+GGG | - | chr3_4:22285482-22285501 | None:intergenic | 45.0% | |
| AGTCTAGTAGACCCATATGG+TGG | - | chr3_4:22285483-22285502 | None:intergenic | 45.0% | |
| TTGGAATAATGCTGGACTGC+TGG | + | chr3_4:22285601-22285620 | Msa0494400:intron | 45.0% | |
| !! | ATACTGGTAGTGGGTAAGAG+TGG | + | chr3_4:22285652-22285671 | Msa0494400:intron | 45.0% |
| ! | TAGTGGGTAAGAGTGGAAGT+AGG | + | chr3_4:22285659-22285678 | Msa0494400:intron | 45.0% |
| !! | TAGCTCAGTTGGTGAGCTAA+GGG | - | chr3_4:22285781-22285800 | None:intergenic | 45.0% |
| CACCAACTGAGCTACTTACT+TGG | + | chr3_4:22285787-22285806 | Msa0494400:intron | 45.0% | |
| TCCCAAGTAAGTAGCTCAGT+TGG | - | chr3_4:22285792-22285811 | None:intergenic | 45.0% | |
| TGAAGACAATAGGAAGGGTC+TGG | - | chr3_4:22285993-22286012 | None:intergenic | 45.0% | |
| GTGATCCATGAGTTGTTGGT+TGG | + | chr3_4:22286074-22286093 | Msa0494400:intron | 45.0% | |
| TTCAGCCAACCAACAACTCA+TGG | - | chr3_4:22286082-22286101 | None:intergenic | 45.0% | |
| GATACTAGAGGCTAGAGCTA+TGG | + | chr3_4:22286105-22286124 | Msa0494400:intron | 45.0% | |
| !!! | AGTGTTTTTGGTGATAGGGC+AGG | + | chr3_4:22286222-22286241 | Msa0494400:intron | 45.0% |
| ATCAACAACAGTGTAGGGGA+GGG | - | chr3_4:22286302-22286321 | None:intergenic | 45.0% | |
| !! | TGGAAGGTGTCTGGAAACAA+GGG | - | chr3_4:22286378-22286397 | None:intergenic | 45.0% |
| !! | ATGGAAGGTGTCTGGAAACA+AGG | - | chr3_4:22286379-22286398 | None:intergenic | 45.0% |
| ! | ATGATTTTGTCAGGTGGAGG+TGG | - | chr3_4:22286407-22286426 | None:intergenic | 45.0% |
| ATTTAGTCCACCCGAAACAC+AGG | + | chr3_4:22286472-22286491 | Msa0494400:intron | 45.0% | |
| TTTAGTCCACCCGAAACACA+GGG | + | chr3_4:22286473-22286492 | Msa0494400:intron | 45.0% | |
| GTTTAACTGCCCTGTGTTTC+GGG | - | chr3_4:22286485-22286504 | None:intergenic | 45.0% | |
| TGCTCCTTATCTAGTCCATG+AGG | - | chr3_4:22286509-22286528 | None:intergenic | 45.0% | |
| TTTCAGCATACAGTGAAGCC+TGG | + | chr3_4:22286782-22286801 | Msa0494400:intron | 45.0% | |
| CATGACATGTTGGATGTGCT+CGG | + | chr3_4:22286866-22286885 | Msa0494400:CDS | 45.0% | |
| ! | GGTGAGGTTGATCTATCAAG+TGG | + | chr3_4:22286887-22286906 | Msa0494400:CDS | 45.0% |
| GATGGCATTATCAGATTCGC+TGG | + | chr3_4:22286970-22286989 | Msa0494400:CDS | 45.0% | |
| !! | TATAAAAATTTAATTAAAAG+GGG | + | chr3_4:22286559-22286578 | Msa0494400:intron | 5.0% |
| ! | CGTGTTGTGTCGGTGATTAG+AGG | - | chr3_4:22282864-22282883 | None:intergenic | 50.0% |
| GTCGTTGTCAGTGTCCTATC+TGG | + | chr3_4:22282953-22282972 | Msa0494400:intron | 50.0% | |
| ACTTTAGCACTACGAGCCAC+AGG | - | chr3_4:22283170-22283189 | None:intergenic | 50.0% | |
| ACCTGACAAGCGTGGTGTAA+AGG | + | chr3_4:22283229-22283248 | Msa0494400:CDS | 50.0% | |
| CCTGACAAGCGTGGTGTAAA+GGG | + | chr3_4:22283230-22283249 | Msa0494400:CDS | 50.0% | |
| GGGTTTACAACGCAAGCATC+AGG | + | chr3_4:22283250-22283269 | Msa0494400:CDS | 50.0% | |
| ! | CATCAGGACTGTACCGATGT+CGG | + | chr3_4:22283266-22283285 | Msa0494400:CDS | 50.0% |
| GATGTCGGTGAATCCAGTAC+TGG | + | chr3_4:22283281-22283300 | Msa0494400:CDS | 50.0% | |
| TGGTCTAGCACTACCAGTAC+TGG | - | chr3_4:22283297-22283316 | None:intergenic | 50.0% | |
| GAATACGAGAACATCCACCG+GGG | - | chr3_4:22283358-22283377 | None:intergenic | 50.0% | |
| ! | CTGATGGCTTGGGTTTCGAA+AGG | - | chr3_4:22283538-22283557 | None:intergenic | 50.0% |
| CCGATTTCCATTGCAGAGGT+TGG | - | chr3_4:22283638-22283657 | None:intergenic | 50.0% | |
| AGGGCAGGTTCTCACTGTAT+TGG | - | chr3_4:22283669-22283688 | None:intergenic | 50.0% | |
| !! | TGGGGCTAGCTGTTTCTACA+AGG | + | chr3_4:22283941-22283960 | Msa0494400:CDS | 50.0% |
| ! | CAATCTTGGTTGGTGCCTAC+TGG | + | chr3_4:22284881-22284900 | Msa0494400:intron | 50.0% |
| !! | TATAGGAGTAATGGGCGGAG+GGG | - | chr3_4:22284999-22285018 | None:intergenic | 50.0% |
| CAACTAGCGGCTCTGTATCA+GGG | - | chr3_4:22285299-22285318 | None:intergenic | 50.0% | |
| ! | ATGACGCATTGCATTGGCGA+TGG | + | chr3_4:22285398-22285417 | Msa0494400:intron | 50.0% |
| TAATGCTGGACTGCTGGTAG+TGG | + | chr3_4:22285607-22285626 | Msa0494400:intron | 50.0% | |
| GGTGAGCTAAGGGACATCAA+AGG | - | chr3_4:22285771-22285790 | None:intergenic | 50.0% | |
| !! | GTAGCTCAGTTGGTGAGCTA+AGG | - | chr3_4:22285782-22285801 | None:intergenic | 50.0% |
| TGCTTGTTCAGCAGCTAGCT+AGG | + | chr3_4:22286171-22286190 | Msa0494400:intron | 50.0% | |
| TCAACAACAGTGTAGGGGAG+GGG | - | chr3_4:22286301-22286320 | None:intergenic | 50.0% | |
| CATCAACAACAGTGTAGGGG+AGG | - | chr3_4:22286303-22286322 | None:intergenic | 50.0% | |
| GTTTCGGTAGGCTAGGACAA+TGG | - | chr3_4:22286340-22286359 | None:intergenic | 50.0% | |
| TTCAAGGGTTTCGGTAGGCT+AGG | - | chr3_4:22286347-22286366 | None:intergenic | 50.0% | |
| CTGTGTTCAAGGGTTTCGGT+AGG | - | chr3_4:22286352-22286371 | None:intergenic | 50.0% | |
| GTGGCTGTGTTCAAGGGTTT+CGG | - | chr3_4:22286356-22286375 | None:intergenic | 50.0% | |
| ACAAGGGTGGCTGTGTTCAA+GGG | - | chr3_4:22286362-22286381 | None:intergenic | 50.0% | |
| AACAAGGGTGGCTGTGTTCA+AGG | - | chr3_4:22286363-22286382 | None:intergenic | 50.0% | |
| ! | AAGGTGTCTGGAAACAAGGG+TGG | - | chr3_4:22286375-22286394 | None:intergenic | 50.0% |
| ! | ATTTTGTCAGGTGGAGGTGG+TGG | - | chr3_4:22286404-22286423 | None:intergenic | 50.0% |
| !! | CGGGTGGACTAAATAATGGC+AGG | - | chr3_4:22286466-22286485 | None:intergenic | 50.0% |
| CAGGGCAGTTAAACACCTCA+TGG | + | chr3_4:22286491-22286510 | Msa0494400:intron | 50.0% | |
| !! | GACTAGATAAGGAGCACCCT+TGG | + | chr3_4:22286513-22286532 | Msa0494400:intron | 50.0% |
| TGAAGCCTGGCTCATACACA+TGG | + | chr3_4:22286795-22286814 | Msa0494400:CDS | 50.0% | |
| TGTCTCCATGTGTATGAGCC+AGG | - | chr3_4:22286803-22286822 | None:intergenic | 50.0% | |
| ! | TTTTGTCTGCGTTGAGGTGG+TGG | - | chr3_4:22286833-22286852 | None:intergenic | 50.0% |
| !!! | TGGTTTTGTCTGCGTTGAGG+TGG | - | chr3_4:22286836-22286855 | None:intergenic | 50.0% |
| GCATTATCAGATTCGCTGGC+TGG | + | chr3_4:22286974-22286993 | Msa0494400:CDS | 50.0% | |
| ! | TTATCAGATTCGCTGGCTGG+CGG | + | chr3_4:22286977-22286996 | Msa0494400:CDS | 50.0% |
| ! | GCTCTTGGGATGGATGCTTT+TGG | + | chr3_4:22287088-22287107 | Msa0494400:CDS | 50.0% |
| CCTCATCGTCATCGTCATCA+GGG | - | chr3_4:22287114-22287133 | None:intergenic | 50.0% | |
| TCCTCATCGTCATCGTCATC+AGG | - | chr3_4:22287115-22287134 | None:intergenic | 50.0% | |
| TCGAATGGCTGCTATGCAAG+AGG | + | chr3_4:22287150-22287169 | Msa0494400:CDS | 50.0% | |
| ATGCAAGAGGCCATGGTTTC+TGG | + | chr3_4:22287163-22287182 | Msa0494400:CDS | 50.0% | |
| TGCAAGAGGCCATGGTTTCT+GGG | + | chr3_4:22287164-22287183 | Msa0494400:CDS | 50.0% | |
| GCGCGAGGCGTATGTTTGAA+AGG | + | chr3_4:22282732-22282751 | Msa0494400:CDS | 55.0% | |
| TTCAGATTCTGCTGCGCCTG+TGG | + | chr3_4:22283151-22283170 | Msa0494400:CDS | 55.0% | |
| GTTCCTTCACCTGACAAGCG+TGG | + | chr3_4:22283221-22283240 | Msa0494400:CDS | 55.0% | |
| ACACCACGCTTGTCAGGTGA+AGG | - | chr3_4:22283227-22283246 | None:intergenic | 55.0% | |
| CCCTTTACACCACGCTTGTC+AGG | - | chr3_4:22283233-22283252 | None:intergenic | 55.0% | |
| TAGTGCCCCAACCTCTGCAA+TGG | + | chr3_4:22283628-22283647 | Msa0494400:CDS | 55.0% | |
| ! | TAGTTTGCGGCAAACAGGGC+AGG | - | chr3_4:22283684-22283703 | None:intergenic | 55.0% |
| GCAACTAGCGGCTCTGTATC+AGG | - | chr3_4:22285300-22285319 | None:intergenic | 55.0% | |
| TCGGTAGGCTAGGACAATGG+TGG | - | chr3_4:22286337-22286356 | None:intergenic | 55.0% | |
| !! | TGGTGGTGATGGAAGGTGTC+TGG | - | chr3_4:22286387-22286406 | None:intergenic | 55.0% |
| TAACTGCCCTGTGTTTCGGG+TGG | - | chr3_4:22286482-22286501 | None:intergenic | 55.0% | |
| CATACACATGGAGACACCGC+AGG | + | chr3_4:22286807-22286826 | Msa0494400:CDS | 55.0% | |
| ! | CATGTTGGATGTGCTCGGTG+AGG | + | chr3_4:22286871-22286890 | Msa0494400:CDS | 55.0% |
| TGGCGGTTCAGGTCCTTGTT+TGG | + | chr3_4:22286994-22287013 | Msa0494400:CDS | 55.0% | |
| ! | GGCGGTTCAGGTCCTTGTTT+GGG | + | chr3_4:22286995-22287014 | Msa0494400:CDS | 55.0% |
| TGCTGCTATGCAAGAGGCCA+TGG | + | chr3_4:22287066-22287085 | Msa0494400:CDS | 55.0% | |
| ATGCAAGAGGCCATGGCTCT+TGG | + | chr3_4:22287073-22287092 | Msa0494400:CDS | 55.0% | |
| TGCAAGAGGCCATGGCTCTT+GGG | + | chr3_4:22287074-22287093 | Msa0494400:CDS | 55.0% | |
| AGCATCCATCCCAAGAGCCA+TGG | - | chr3_4:22287086-22287105 | None:intergenic | 55.0% | |
| ! | CCCTGATGACGATGACGATG+AGG | + | chr3_4:22287111-22287130 | Msa0494400:CDS | 55.0% |
| TTTGCTGCTGCCAACTGCCC+CGG | + | chr3_4:22283338-22283357 | Msa0494400:CDS | 60.0% | |
| AGAACATCCACCGGGGCAGT+TGG | - | chr3_4:22283351-22283370 | None:intergenic | 60.0% | |
| ATGCGCGCTAACCACGCATC+TGG | + | chr3_4:22284169-22284188 | Msa0494400:intron | 60.0% | |
| !! | AGTAATGGGCGGAGGGGTGA+TGG | - | chr3_4:22284993-22285012 | None:intergenic | 60.0% |
| GGGGAGGGGCAAACAAGGTT+GGG | - | chr3_4:22286287-22286306 | None:intergenic | 60.0% | |
| AGGGGAGGGGCAAACAAGGT+TGG | - | chr3_4:22286288-22286307 | None:intergenic | 60.0% | |
| GTGTAGGGGAGGGGCAAACA+AGG | - | chr3_4:22286292-22286311 | None:intergenic | 60.0% | |
| !! | GTGGAGGTGGTGGTGATGGA+AGG | - | chr3_4:22286394-22286413 | None:intergenic | 60.0% |
| ! | TCAGGTGGAGGTGGTGGTGA+TGG | - | chr3_4:22286398-22286417 | None:intergenic | 60.0% |
| AGAGGCCATGGCTCTTGGGA+TGG | + | chr3_4:22287078-22287097 | Msa0494400:CDS | 60.0% | |
| GGCTGCTATGCAAGAGGCCA+TGG | + | chr3_4:22287156-22287175 | Msa0494400:CDS | 60.0% | |
| ! | TGCGTTGAGGTGGTGGCCTG+CGG | - | chr3_4:22286826-22286845 | None:intergenic | 65.0% |
| ! | GATTCGCTGGCTGGCGGTTC+AGG | + | chr3_4:22286983-22287002 | Msa0494400:CDS | 65.0% |
| GCTGCTGCCAACTGCCCCGG+TGG | + | chr3_4:22283341-22283360 | Msa0494400:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 22282030 | 22287685 | 22282030 | ID=Msa0494400;Name=Msa0494400 |
| chr3_4 | mRNA | 22282030 | 22287685 | 22282030 | ID=Msa0494400-mRNA-1;Parent=Msa0494400;Name=Msa0494400-mRNA-1;_AED=0.03;_eAED=0.03;_QI=76|1|1|1|0.75|0.8|5|352|482 |
| chr3_4 | exon | 22282030 | 22282116 | 22282030 | ID=Msa0494400-mRNA-1:exon:5587;Parent=Msa0494400-mRNA-1 |
| chr3_4 | exon | 22282716 | 22282800 | 22282716 | ID=Msa0494400-mRNA-1:exon:5588;Parent=Msa0494400-mRNA-1 |
| chr3_4 | exon | 22283053 | 22283789 | 22283053 | ID=Msa0494400-mRNA-1:exon:5589;Parent=Msa0494400-mRNA-1 |
| chr3_4 | exon | 22283893 | 22283962 | 22283893 | ID=Msa0494400-mRNA-1:exon:5590;Parent=Msa0494400-mRNA-1 |
| chr3_4 | exon | 22286788 | 22287685 | 22286788 | ID=Msa0494400-mRNA-1:exon:5591;Parent=Msa0494400-mRNA-1 |
| chr3_4 | five_prime_UTR | 22282030 | 22282105 | 22282030 | ID=Msa0494400-mRNA-1:five_prime_utr;Parent=Msa0494400-mRNA-1 |
| chr3_4 | CDS | 22282106 | 22282116 | 22282106 | ID=Msa0494400-mRNA-1:cds;Parent=Msa0494400-mRNA-1 |
| chr3_4 | CDS | 22282716 | 22282800 | 22282716 | ID=Msa0494400-mRNA-1:cds;Parent=Msa0494400-mRNA-1 |
| chr3_4 | CDS | 22283053 | 22283789 | 22283053 | ID=Msa0494400-mRNA-1:cds;Parent=Msa0494400-mRNA-1 |
| chr3_4 | CDS | 22283893 | 22283962 | 22283893 | ID=Msa0494400-mRNA-1:cds;Parent=Msa0494400-mRNA-1 |
| chr3_4 | CDS | 22286788 | 22287333 | 22286788 | ID=Msa0494400-mRNA-1:cds;Parent=Msa0494400-mRNA-1 |
| chr3_4 | three_prime_UTR | 22287334 | 22287685 | 22287334 | ID=Msa0494400-mRNA-1:three_prime_utr;Parent=Msa0494400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
