AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0443810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0443810 MtrunA17_Chr3g0088461 96.501 343 7 4 1 338 1 343 0.0 667
Msa0443810 MtrunA17_Chr4g0032401 45.504 367 130 12 3 336 1 330 1.77e-84 258
Msa0443810 MtrunA17_Chr2g0328771 46.628 341 145 10 3 331 1 316 5.75e-77 239
Msa0443810 MtrunA17_Chr1g0193371 78.899 109 23 0 19 127 9 117 3.84e-59 194
Msa0443810 MtrunA17_Chr1g0193801 76.147 109 26 0 19 127 9 117 4.93e-58 192
Msa0443810 MtrunA17_Chr1g0211161 59.146 164 63 3 19 180 10 171 1.52e-57 186
Msa0443810 MtrunA17_Chr2g0330041 73.394 109 29 0 18 126 8 116 1.70e-57 191
Msa0443810 MtrunA17_Chr8g0342541 72.477 109 30 0 18 126 8 116 2.71e-57 189
Msa0443810 MtrunA17_Chr3g0117091 59.064 171 59 4 19 182 9 175 3.45e-57 189
Msa0443810 MtrunA17_Chr7g0270891 76.147 109 26 0 19 127 9 117 3.87e-57 189
Msa0443810 MtrunA17_Chr8g0342521 73.394 109 29 0 18 126 8 116 5.79e-57 188
Msa0443810 MtrunA17_Chr4g0058631 76.852 108 25 0 19 126 9 116 1.01e-56 188
Msa0443810 MtrunA17_Chr8g0387421 67.273 110 36 0 18 127 8 117 9.82e-55 181
Msa0443810 MtrunA17_Chr8g0342481 66.942 121 39 1 18 137 8 128 2.51e-54 182
Msa0443810 MtrunA17_Chr5g0397231 69.903 103 31 0 18 120 8 110 1.53e-53 179
Msa0443810 MtrunA17_Chr7g0271241 60.403 149 44 2 19 152 9 157 1.55e-53 180
Msa0443810 MtrunA17_Chr2g0309911 42.922 219 110 5 18 223 7 223 2.22e-52 175
Msa0443810 MtrunA17_Chr1g0203441 70.370 108 32 0 19 126 10 117 3.27e-50 168
Msa0443810 MtrunA17_Chr4g0037141 34.169 319 152 10 19 324 9 282 5.26e-50 168
Msa0443810 MtrunA17_Chr6g0470971 66.055 109 37 0 17 125 9 117 4.22e-48 163
Msa0443810 MtrunA17_Chr5g0435101 58.871 124 42 2 3 126 1 115 5.11e-48 160
Msa0443810 MtrunA17_Chr3g0131121 64.815 108 38 0 19 126 9 116 5.27e-48 163
Msa0443810 MtrunA17_Chr2g0323411 66.972 109 36 0 18 126 8 116 5.33e-48 164
Msa0443810 MtrunA17_Chr3g0115821 65.138 109 38 0 18 126 8 116 5.88e-48 164
Msa0443810 MtrunA17_Chr2g0281071 67.619 105 34 0 22 126 13 117 6.95e-48 164
Msa0443810 MtrunA17_Chr2g0323351 55.303 132 56 1 18 146 8 139 2.82e-47 160
Msa0443810 MtrunA17_Chr4g0048511 66.667 105 35 0 22 126 13 117 3.99e-47 162
Msa0443810 MtrunA17_Chr8g0385321 61.261 111 43 0 24 134 14 124 6.58e-47 161
Msa0443810 MtrunA17_Chr1g0203411 54.615 130 57 1 19 146 9 138 8.93e-47 160
Msa0443810 MtrunA17_Chr7g0217741 64.815 108 38 0 19 126 9 116 5.66e-46 158
Msa0443810 MtrunA17_Chr6g0453471 64.220 109 39 0 18 126 8 116 7.49e-46 159
Msa0443810 MtrunA17_Chr4g0042671 65.741 108 37 0 19 126 9 116 9.85e-46 160
Msa0443810 MtrunA17_Chr7g0274581 62.264 106 40 0 22 127 12 117 1.68e-45 154
Msa0443810 MtrunA17_Chr8g0349261 61.017 118 45 1 10 126 1 118 1.92e-45 157
Msa0443810 MtrunA17_Chr4g0057031 61.468 109 42 0 18 126 8 116 2.15e-45 155
Msa0443810 MtrunA17_Chr4g0022931 56.061 132 55 1 19 147 10 141 2.39e-45 155
Msa0443810 MtrunA17_Chr5g0410961 61.905 105 40 0 22 126 12 116 4.08e-45 157
Msa0443810 MtrunA17_Chr3g0110351 61.818 110 42 0 18 127 8 117 4.41e-45 156
Msa0443810 MtrunA17_Chr5g0434571 55.556 144 57 4 9 146 36 178 6.49e-45 157
Msa0443810 MtrunA17_Chr4g0044421 58.065 124 44 1 3 126 1 116 6.70e-45 152
Msa0443810 MtrunA17_Chr5g0395281 63.303 109 40 0 18 126 8 116 8.52e-45 155
Msa0443810 MtrunA17_Chr4g0070611 58.678 121 46 1 19 135 9 129 1.21e-44 155
Msa0443810 MtrunA17_Chr4g0070641 58.197 122 47 1 19 136 9 130 1.69e-44 150
Msa0443810 MtrunA17_Chr4g0039971 61.468 109 42 0 18 126 9 117 2.12e-44 155
Msa0443810 MtrunA17_Chr1g0167661 57.364 129 55 0 19 147 9 137 2.14e-44 152
Msa0443810 MtrunA17_Chr6g0452271 57.798 109 46 0 18 126 8 116 3.03e-44 154
Msa0443810 MtrunA17_Chr4g0068061 61.111 108 42 0 19 126 9 116 6.05e-44 154
Msa0443810 MtrunA17_Chr4g0022901 62.617 107 40 0 19 125 10 116 1.03e-43 151
Msa0443810 MtrunA17_Chr1g0187761 55.556 135 54 1 19 147 9 143 1.19e-43 150
Msa0443810 MtrunA17_Chr7g0275911 59.091 110 45 0 18 127 8 117 1.82e-43 150
Msa0443810 MtrunA17_Chr7g0228891 60.909 110 43 0 18 127 8 117 2.25e-43 150
Msa0443810 MtrunA17_Chr8g0343831 61.538 104 40 0 24 127 10 113 2.87e-43 150
Msa0443810 MtrunA17_Chr8g0346561 53.125 128 59 1 19 146 9 135 3.72e-43 150
Msa0443810 MtrunA17_Chr3g0103281 62.037 108 41 0 19 126 9 116 4.38e-43 151
Msa0443810 MtrunA17_Chr7g0261281 59.664 119 45 1 19 134 9 127 5.83e-43 149
Msa0443810 MtrunA17_Chr3g0121241 59.259 108 44 0 19 126 39 146 8.09e-43 150
Msa0443810 MtrunA17_Chr1g0167691 62.963 108 40 0 19 126 9 116 1.10e-42 148
Msa0443810 MtrunA17_Chr4g0022911 41.176 204 106 4 20 220 11 203 2.04e-42 149
Msa0443810 MtrunA17_Chr4g0055981 55.085 118 53 0 8 125 41 158 2.15e-42 147
Msa0443810 MtrunA17_Chr7g0254411 51.773 141 63 2 19 156 9 147 1.04e-41 148
Msa0443810 MtrunA17_Chr7g0228231 53.982 113 52 0 22 134 14 126 1.55e-41 144
Msa0443810 MtrunA17_Chr1g0151941 49.612 129 55 2 18 136 8 136 2.59e-41 144
Msa0443810 MtrunA17_Chr1g0194951 60.185 108 43 0 19 126 9 116 4.06e-41 147
Msa0443810 MtrunA17_Chr6g0450101 53.448 116 54 0 12 127 4 119 8.68e-41 142
Msa0443810 MtrunA17_Chr2g0311221 61.165 103 40 0 18 120 10 112 9.78e-41 145
Msa0443810 MtrunA17_Chr1g0209661 53.982 113 52 0 15 127 20 132 1.25e-40 144
Msa0443810 MtrunA17_Chr1g0168661 60.000 105 42 0 23 127 22 126 1.39e-40 143
Msa0443810 MtrunA17_Chr7g0217221 55.932 118 49 1 17 131 7 124 4.40e-40 142
Msa0443810 MtrunA17_Chr1g0186061 51.639 122 59 0 17 138 15 136 7.08e-40 141
Msa0443810 MtrunA17_Chr8g0342511 71.605 81 23 0 17 97 7 87 2.28e-39 134
Msa0443810 MtrunA17_Chr8g0342531 64.773 88 31 0 12 99 2 89 3.84e-39 136
Msa0443810 MtrunA17_Chr3g0099131 54.630 108 49 0 20 127 39 146 3.92e-39 145
Msa0443810 MtrunA17_Chr4g0060721 38.889 180 100 1 19 198 10 179 4.03e-39 141
Msa0443810 MtrunA17_Chr3g0092401 55.357 112 50 0 19 130 10 121 6.05e-39 140
Msa0443810 MtrunA17_Chr5g0417821 59.048 105 43 0 22 126 7 111 6.16e-39 139
Msa0443810 MtrunA17_Chr1g0154031 56.481 108 47 0 22 129 76 183 8.30e-39 142
Msa0443810 MtrunA17_Chr1g0194291 57.273 110 47 0 18 127 17 126 9.76e-39 138
Msa0443810 MtrunA17_Chr4g0022881 48.092 131 68 0 17 147 7 137 1.09e-38 137
Msa0443810 MtrunA17_Chr1g0180391 49.618 131 64 1 22 150 19 149 1.12e-38 137
Msa0443810 MtrunA17_Chr6g0453211 58.252 103 43 0 18 120 8 110 1.92e-38 139
Msa0443810 MtrunA17_Chr3g0080861 55.140 107 48 0 22 128 37 143 2.29e-38 142
Msa0443810 MtrunA17_Chr4g0022891 46.154 143 73 1 18 160 8 146 2.47e-38 136
Msa0443810 MtrunA17_Chr5g0400821 55.455 110 48 1 18 126 8 117 3.40e-38 138
Msa0443810 MtrunA17_Chr1g0152011 56.364 110 47 1 18 126 8 117 3.56e-38 139
Msa0443810 MtrunA17_Chr8g0354661 55.769 104 46 0 22 125 37 140 4.75e-38 142
Msa0443810 MtrunA17_Chr4g0028311 55.455 110 48 1 18 126 8 117 6.05e-38 137
Msa0443810 MtrunA17_Chr7g0247131 74.667 75 19 0 54 128 10 84 1.16e-37 135
Msa0443810 MtrunA17_Chr7g0269831 57.851 121 51 0 19 139 9 129 2.09e-37 137
Msa0443810 MtrunA17_Chr3g0135311 53.636 110 50 1 18 126 8 117 2.55e-37 136
Msa0443810 MtrunA17_Chr7g0264641 48.760 121 61 1 18 137 8 128 7.75e-37 133
Msa0443810 MtrunA17_Chr1g0194301 53.774 106 49 0 22 127 33 138 9.45e-37 133
Msa0443810 MtrunA17_Chr4g0030881 50.833 120 52 1 23 135 8 127 9.87e-37 133
Msa0443810 MtrunA17_Chr8g0342461 68.675 83 25 1 18 99 8 90 1.35e-36 129
Msa0443810 MtrunA17_Chr2g0327351 55.769 104 45 1 18 120 8 111 2.28e-36 133
Msa0443810 MtrunA17_Chr8g0342471 68.675 83 25 1 18 99 8 90 2.94e-36 128
Msa0443810 MtrunA17_Chr2g0327821 50.000 118 59 0 19 136 3 120 3.65e-36 130
Msa0443810 MtrunA17_Chr2g0322521 53.636 110 51 0 19 128 26 135 3.96e-36 134
Msa0443810 MtrunA17_Chr5g0434931 48.855 131 61 4 1 126 10 139 2.85e-35 129
Msa0443810 MtrunA17_Chr7g0240821 49.138 116 59 0 27 142 6 121 6.45e-35 127
Msa0443810 MtrunA17_Chr4g0054391 55.340 103 45 1 18 119 8 110 8.02e-35 129
Msa0443810 MtrunA17_Chr6g0487491 42.262 168 85 4 18 173 8 175 8.56e-35 127
Msa0443810 MtrunA17_Chr5g0434911 47.581 124 62 1 6 126 2 125 1.11e-34 128
Msa0443810 MtrunA17_Chr4g0072751 53.846 104 47 1 18 120 8 111 1.56e-34 129
Msa0443810 MtrunA17_Chr1g0192411 52.336 107 51 0 21 127 11 117 3.71e-34 129
Msa0443810 MtrunA17_Chr2g0293911 55.660 106 47 0 22 127 24 129 3.81e-34 127
Msa0443810 MtrunA17_Chr8g0360111 53.333 105 49 0 18 122 21 125 6.64e-34 125
Msa0443810 MtrunA17_Chr4g0068921 54.717 106 48 0 22 127 24 129 1.08e-33 123
Msa0443810 MtrunA17_Chr5g0434831 52.381 105 50 0 22 126 7 111 2.92e-33 121
Msa0443810 MtrunA17_Chr7g0220341 45.455 132 70 1 18 147 21 152 3.96e-33 124
Msa0443810 MtrunA17_Chr5g0440781 48.305 118 57 2 23 139 13 127 6.63e-33 120
Msa0443810 MtrunA17_Chr5g0440761 48.305 118 57 2 23 139 13 127 1.59e-32 122
Msa0443810 MtrunA17_Chr5g0441141 48.305 118 57 2 23 139 13 127 1.72e-32 122
Msa0443810 MtrunA17_Chr4g0042611 60.000 80 32 0 19 98 9 88 2.83e-32 115
Msa0443810 MtrunA17_Chr5g0434841 49.524 105 53 0 22 126 20 124 1.36e-31 120
Msa0443810 MtrunA17_Chr7g0228991 51.887 106 49 2 22 126 29 133 1.88e-31 119
Msa0443810 MtrunA17_Chr5g0395221 64.198 81 29 0 18 98 8 88 6.89e-31 112
Msa0443810 MtrunA17_Chr5g0441131 44.355 124 65 2 23 145 10 130 4.30e-30 113
Msa0443810 MtrunA17_Chr8g0334881 50.962 104 50 1 22 124 10 113 1.81e-29 115
Msa0443810 MtrunA17_Chr4g0013361 49.573 117 56 3 22 137 10 124 2.05e-29 114
Msa0443810 MtrunA17_Chr4g0053431 41.566 166 76 4 24 169 5 169 2.15e-29 114
Msa0443810 MtrunA17_Chr4g0008551 54.902 102 45 1 24 125 38 138 4.11e-29 114
Msa0443810 MtrunA17_Chr2g0323321 61.728 81 31 0 22 102 11 91 9.79e-29 107
Msa0443810 MtrunA17_Chr5g0401731 37.500 200 91 6 13 180 2 199 2.34e-28 112
Msa0443810 MtrunA17_Chr5g0429661 41.880 117 67 1 9 125 107 222 2.94e-28 112
Msa0443810 MtrunA17_Chr3g0099141 49.425 87 44 0 18 104 36 122 3.17e-28 107
Msa0443810 MtrunA17_Chr6g0454921 49.524 105 52 1 24 128 15 118 6.26e-28 108
Msa0443810 MtrunA17_Chr3g0133601 53.636 110 50 1 16 125 29 137 1.59e-27 107
Msa0443810 MtrunA17_Chr2g0294811 56.790 81 35 0 18 98 8 88 2.45e-27 103
Msa0443810 MtrunA17_Chr3g0117511 30.258 271 168 8 4 271 170 422 2.50e-26 108
Msa0443810 MtrunA17_Chr7g0238631 50.000 106 52 1 21 126 110 214 5.32e-26 108
Msa0443810 MtrunA17_Chr5g0417621 42.149 121 69 1 11 131 121 240 1.88e-25 105
Msa0443810 MtrunA17_Chr5g0437321 51.515 99 47 1 24 122 19 116 1.97e-25 103
Msa0443810 MtrunA17_Chr3g0139671 49.057 106 53 1 21 126 82 186 2.74e-25 107
Msa0443810 MtrunA17_Chr5g0434901 60.294 68 27 0 56 123 7 74 1.13e-24 96.7
Msa0443810 MtrunA17_Chr7g0229131 39.456 147 77 4 54 197 4 141 1.81e-24 97.8
Msa0443810 MtrunA17_Chr7g0229101 60.000 70 28 0 54 123 4 73 2.16e-24 99.0
Msa0443810 MtrunA17_Chr4g0058991 43.925 107 59 1 19 125 204 309 2.99e-24 102
Msa0443810 MtrunA17_Chr6g0480581 47.525 101 52 1 24 124 4 103 4.07e-24 99.0
Msa0443810 MtrunA17_Chr4g0042501 40.336 119 70 1 9 127 90 207 4.73e-23 99.0
Msa0443810 MtrunA17_Chr1g0157731 45.283 106 57 1 21 126 88 192 5.44e-23 100
Msa0443810 MtrunA17_Chr6g0460661 40.541 111 63 2 16 125 8 116 8.42e-23 93.2
Msa0443810 MtrunA17_Chr5g0425591 50.000 82 40 1 23 103 10 91 2.16e-22 90.1
Msa0443810 MtrunA17_Chr6g0460671 41.739 115 65 2 12 125 86 199 2.83e-22 95.9
Msa0443810 MtrunA17_Chr7g0228531 44.037 109 58 3 24 132 220 325 5.50e-22 96.3
Msa0443810 MtrunA17_Chr6g0453751 47.253 91 39 2 22 103 20 110 7.17e-22 89.7
Msa0443810 MtrunA17_Chr5g0397841 46.939 98 51 1 22 119 108 204 9.19e-22 95.9
Msa0443810 MtrunA17_Chr1g0177901 46.809 94 48 2 35 128 5 96 1.55e-21 91.3
Msa0443810 MtrunA17_Chr7g0228401 46.154 104 49 3 35 138 290 386 4.67e-21 94.0
Msa0443810 MtrunA17_Chr3g0093811 49.398 83 39 1 47 126 4 86 8.98e-21 90.5
Msa0443810 MtrunA17_Chr3g0125801 44.762 105 55 2 24 127 16 118 2.68e-19 86.7
Msa0443810 MtrunA17_Chr7g0228481 40.708 113 62 3 24 133 220 330 9.10e-19 86.7
Msa0443810 MtrunA17_Chr7g0254261 42.727 110 61 2 17 125 81 189 4.02e-18 84.3
Msa0443810 MtrunA17_Chr7g0233061 38.095 126 62 5 9 129 171 285 6.59e-18 83.6
Msa0443810 MtrunA17_Chr5g0416341 36.296 135 78 3 27 154 29 162 1.38e-17 83.6
Msa0443810 MtrunA17_Chr7g0238651 38.298 94 56 1 27 118 10 103 4.65e-16 78.2
Msa0443810 MtrunA17_Chr1g0193901 51.515 66 30 2 14 78 4 68 1.01e-15 72.4
Msa0443810 MtrunA17_Chr1g0193891 51.515 66 30 2 14 78 4 68 1.01e-15 72.4
Msa0443810 MtrunA17_Chr1g0193871 51.515 66 30 2 14 78 4 68 1.01e-15 72.4
Msa0443810 MtrunA17_Chr1g0193881 51.515 66 30 2 14 78 4 68 1.01e-15 72.4
Msa0443810 MtrunA17_Chr8g0362231 37.624 101 62 1 27 127 25 124 2.52e-15 76.6
Msa0443810 MtrunA17_Chr5g0434871 58.140 43 18 0 84 126 2 44 4.63e-13 63.5
Msa0443810 MtrunA17_Chr3g0104491 39.474 76 41 2 64 135 2 76 3.08e-12 66.2
Msa0443810 MtrunA17_Chr2g0322831 58.537 41 17 0 80 120 34 74 7.94e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0443810 AT3G08500.1 45.161 372 140 12 1 338 1 342 3.92e-80 248
Msa0443810 AT5G12870.1 78.400 125 25 1 3 127 1 123 1.02e-69 219
Msa0443810 AT4G01680.3 77.982 109 24 0 19 127 9 117 2.47e-59 191
Msa0443810 AT4G01680.1 77.982 109 24 0 19 127 9 117 1.21e-58 192
Msa0443810 AT5G26660.1 53.226 186 71 2 19 204 9 178 1.36e-58 193
Msa0443810 AT3G13890.2 74.312 109 28 0 18 126 8 116 2.55e-58 192
Msa0443810 AT1G09540.1 76.147 109 26 0 19 127 9 117 2.89e-58 192
Msa0443810 AT1G57560.1 75.000 108 27 0 19 126 9 116 3.34e-57 188
Msa0443810 AT1G57560.2 75.000 108 27 0 19 126 9 116 3.56e-57 187
Msa0443810 AT1G63910.1 68.182 110 35 0 18 127 8 117 1.67e-55 185
Msa0443810 AT3G13890.1 68.644 118 28 1 18 126 8 125 3.41e-55 184
Msa0443810 AT4G01680.2 70.248 121 24 1 19 127 9 129 4.47e-55 184
Msa0443810 AT3G12720.1 68.519 108 34 0 19 126 19 126 2.58e-52 175
Msa0443810 AT4G05100.1 64.103 117 42 0 10 126 1 117 6.58e-50 169
Msa0443810 AT2G16720.1 66.667 108 36 0 19 126 9 116 1.90e-48 164
Msa0443810 AT4G21440.1 67.593 108 35 0 19 126 9 116 1.99e-48 166
Msa0443810 AT3G48920.1 45.263 190 92 2 18 195 14 203 4.25e-48 163
Msa0443810 AT5G54230.1 67.619 105 34 0 22 126 12 116 6.16e-48 164
Msa0443810 AT4G38620.1 45.213 188 85 5 19 203 9 181 6.86e-48 163
Msa0443810 AT4G34990.1 59.350 123 49 1 24 145 14 136 1.05e-47 162
Msa0443810 AT1G22640.1 51.389 144 66 1 19 162 9 148 1.18e-47 161
Msa0443810 AT5G10280.1 65.421 107 37 0 20 126 10 116 5.92e-47 162
Msa0443810 AT3G01140.2 64.220 109 39 0 18 126 8 116 6.25e-47 162
Msa0443810 AT4G28110.1 63.303 109 40 0 18 126 8 116 8.48e-47 160
Msa0443810 AT5G15310.4 53.472 144 62 2 22 164 12 151 1.65e-46 158
Msa0443810 AT4G12350.1 57.812 128 53 1 18 144 8 135 2.14e-46 159
Msa0443810 AT5G65230.1 62.385 109 41 0 18 126 8 116 2.22e-46 160
Msa0443810 AT3G01140.1 64.220 109 39 0 18 126 51 159 2.42e-46 162
Msa0443810 AT4G09460.1 62.037 108 41 0 19 126 9 116 2.55e-46 157
Msa0443810 AT5G15310.1 52.703 148 65 2 18 164 8 151 2.85e-46 160
Msa0443810 AT5G15310.2 52.703 148 65 2 18 164 8 151 3.01e-46 159
Msa0443810 AT5G52600.1 55.385 130 57 1 19 147 9 138 3.12e-46 156
Msa0443810 AT5G60890.1 61.321 106 41 0 22 127 12 117 3.53e-46 159
Msa0443810 AT3G61250.1 64.220 109 39 0 18 126 8 116 3.63e-46 159
Msa0443810 AT2G31180.1 62.281 114 43 0 19 132 9 122 3.67e-46 157
Msa0443810 AT5G14750.1 47.126 174 75 4 3 165 1 168 3.68e-46 156
Msa0443810 AT5G56110.1 63.889 108 39 0 19 126 9 116 1.73e-45 158
Msa0443810 AT3G02940.2 59.633 109 44 0 18 126 8 116 1.91e-45 157
Msa0443810 AT5G40330.1 40.191 209 114 4 23 222 13 219 1.97e-45 154
Msa0443810 AT1G74430.1 65.714 105 36 0 22 126 12 116 2.03e-45 156
Msa0443810 AT4G25560.1 67.961 103 33 0 23 125 11 113 3.31e-45 156
Msa0443810 AT1G34670.1 64.762 105 37 0 22 126 12 116 4.04e-45 158
Msa0443810 AT3G02940.1 59.633 109 44 0 18 126 8 116 4.08e-45 157
Msa0443810 AT3G02940.3 59.633 109 44 0 18 126 8 116 4.08e-45 157
Msa0443810 AT3G23250.1 45.402 174 92 2 19 192 9 179 7.98e-45 155
Msa0443810 AT5G52260.1 59.375 128 45 1 19 139 9 136 1.14e-44 154
Msa0443810 AT5G35550.1 46.369 179 92 2 10 187 1 176 1.63e-44 153
Msa0443810 AT1G56160.1 46.512 172 84 1 18 189 10 173 2.69e-44 154
Msa0443810 AT1G66230.1 60.909 110 43 0 18 127 8 117 4.68e-44 153
Msa0443810 AT4G22680.1 53.571 140 62 2 18 156 8 145 6.39e-44 152
Msa0443810 AT5G16770.4 60.952 105 41 0 22 126 12 116 1.11e-43 153
Msa0443810 AT5G16770.3 60.952 105 41 0 22 126 12 116 1.11e-43 153
Msa0443810 AT1G06180.1 63.889 108 39 0 19 126 9 116 1.41e-43 150
Msa0443810 AT1G35515.1 57.407 108 46 0 19 126 9 116 2.03e-43 149
Msa0443810 AT5G61420.2 61.905 105 40 0 22 126 12 116 2.39e-43 153
Msa0443810 AT5G16770.1 60.952 105 41 0 22 126 12 116 2.62e-43 152
Msa0443810 AT5G16770.2 60.952 105 41 0 22 126 12 116 2.62e-43 152
Msa0443810 AT2G47460.1 61.111 108 42 0 19 126 9 116 2.75e-43 153
Msa0443810 AT5G07700.1 61.905 105 40 0 22 126 12 116 2.83e-43 152
Msa0443810 AT5G07700.2 61.905 105 40 0 22 126 12 116 2.83e-43 152
Msa0443810 AT1G79180.1 46.914 162 83 2 18 176 10 171 3.62e-43 151
Msa0443810 AT5G16600.1 60.000 110 44 0 18 127 8 117 4.30e-43 152
Msa0443810 AT1G18570.1 61.905 105 40 0 22 126 13 117 6.80e-43 152
Msa0443810 AT5G07690.1 61.905 105 40 0 22 126 12 116 7.91e-43 151
Msa0443810 AT1G16490.1 57.018 114 49 0 18 131 10 123 1.77e-42 149
Msa0443810 AT5G49330.1 61.111 108 42 0 19 126 9 116 2.22e-42 150
Msa0443810 AT3G62610.1 59.259 108 44 0 19 126 9 116 2.39e-42 150
Msa0443810 AT3G27920.1 51.220 123 60 0 21 143 13 135 3.19e-42 146
Msa0443810 AT3G27810.1 49.206 126 64 0 19 144 17 142 4.33e-42 146
Msa0443810 AT3G13540.1 46.575 146 77 1 18 162 19 164 4.78e-42 147
Msa0443810 AT5G62320.1 41.848 184 95 3 10 185 1 180 1.27e-41 145
Msa0443810 AT4G17785.2 59.048 105 43 0 22 126 13 117 1.41e-41 148
Msa0443810 AT5G14340.1 51.007 149 70 2 18 165 20 166 1.66e-41 146
Msa0443810 AT4G17785.1 59.048 105 43 0 22 126 13 117 1.89e-41 148
Msa0443810 AT3G28470.1 62.136 103 39 0 18 120 8 110 2.84e-41 147
Msa0443810 AT3G01530.1 54.054 111 51 0 22 132 25 135 3.38e-41 143
Msa0443810 AT5G40350.1 49.180 122 62 0 20 141 15 136 5.58e-41 143
Msa0443810 AT3G24310.1 56.034 116 51 0 23 138 19 134 6.26e-41 144
Msa0443810 AT1G68320.1 41.143 175 88 2 21 195 18 177 6.58e-41 145
Msa0443810 AT4G13480.1 56.757 111 48 0 23 133 7 117 7.61e-41 144
Msa0443810 AT3G30210.1 58.333 108 45 0 23 130 28 135 8.59e-41 144
Msa0443810 AT3G12820.1 58.716 109 45 0 18 126 10 118 1.19e-40 143
Msa0443810 AT3G47600.1 51.128 133 64 1 18 149 8 140 2.18e-40 145
Msa0443810 AT1G08810.1 56.881 109 47 0 18 126 8 116 3.38e-40 143
Msa0443810 AT1G74080.1 60.000 105 42 0 22 126 12 116 3.42e-40 144
Msa0443810 AT2G26960.1 54.386 114 52 0 11 124 9 122 4.64e-40 146
Msa0443810 AT1G18710.1 58.095 105 44 0 22 126 12 116 5.60e-40 142
Msa0443810 AT5G26660.2 50.000 156 62 2 49 204 8 147 6.30e-40 143
Msa0443810 AT5G55020.1 57.547 106 45 0 22 127 26 131 1.30e-39 146
Msa0443810 AT4G26930.1 57.282 103 44 0 22 124 19 121 1.93e-39 144
Msa0443810 AT1G74650.1 57.407 108 46 0 19 126 9 116 2.30e-39 142
Msa0443810 AT2G32460.2 54.206 107 49 0 22 128 6 112 2.67e-39 145
Msa0443810 AT3G28910.1 54.310 116 53 0 18 133 8 123 2.69e-39 142
Msa0443810 AT2G32460.1 54.206 107 49 0 22 128 18 124 2.75e-39 145
Msa0443810 AT5G62470.2 54.386 114 52 0 19 132 9 122 4.80e-39 142
Msa0443810 AT3G11440.2 49.593 123 62 0 6 128 25 147 6.33e-39 144
Msa0443810 AT1G48000.1 57.009 107 46 0 21 127 31 137 1.28e-38 137
Msa0443810 AT3G49690.1 56.364 110 47 1 18 126 8 117 1.29e-38 139
Msa0443810 AT5G06100.1 55.140 107 48 0 22 128 32 138 1.44e-38 142
Msa0443810 AT3G11440.3 49.593 123 62 0 6 128 25 147 2.69e-38 143
Msa0443810 AT3G11440.4 49.593 123 62 0 6 128 25 147 2.69e-38 143
Msa0443810 AT3G11440.1 49.593 123 62 0 6 128 25 147 2.69e-38 143
Msa0443810 AT5G06100.5 55.140 107 48 0 22 128 32 138 4.16e-38 142
Msa0443810 AT5G06100.2 55.140 107 48 0 22 128 32 138 4.16e-38 142
Msa0443810 AT5G06100.3 55.140 107 48 0 22 128 32 138 4.16e-38 142
Msa0443810 AT5G06100.4 55.140 107 48 0 22 128 32 138 4.16e-38 142
Msa0443810 AT2G47190.1 45.695 151 75 2 20 170 18 161 5.25e-38 137
Msa0443810 AT5G23000.1 55.455 110 48 1 18 126 8 117 7.72e-38 138
Msa0443810 AT5G65790.1 55.455 110 48 1 18 126 8 117 9.29e-38 139
Msa0443810 AT1G25340.1 50.820 122 60 0 12 133 8 129 1.11e-37 136
Msa0443810 AT5G57620.1 55.455 110 48 1 18 126 8 117 1.35e-37 137
Msa0443810 AT1G79180.2 43.713 167 59 2 18 149 10 176 1.74e-37 137
Msa0443810 AT5G62470.1 54.386 114 51 1 19 132 9 121 2.83e-37 137
Msa0443810 AT3G06490.1 55.172 116 52 0 12 127 9 124 3.13e-36 133
Msa0443810 AT5G59780.3 48.305 118 61 0 19 136 5 122 1.08e-35 130
Msa0443810 AT4G37780.1 37.321 209 116 4 18 215 8 212 1.10e-35 131
Msa0443810 AT3G53200.1 53.211 109 51 0 22 130 9 117 1.16e-35 130
Msa0443810 AT2G36890.1 52.727 110 51 1 18 126 8 117 1.22e-35 131
Msa0443810 AT3G46130.1 50.877 114 56 0 23 136 10 123 1.52e-35 130
Msa0443810 AT2G36890.2 48.819 127 63 2 1 126 33 158 2.21e-35 132
Msa0443810 AT5G35550.2 42.458 179 92 2 9 187 12 179 4.49e-34 126
Msa0443810 AT1G66370.1 47.015 134 61 2 22 148 8 138 2.61e-33 124
Msa0443810 AT5G49620.1 53.774 106 49 0 22 127 26 131 6.69e-33 124
Msa0443810 AT1G25340.2 48.361 122 58 1 12 133 8 124 7.06e-33 123
Msa0443810 AT1G25340.3 48.361 122 58 1 12 133 8 124 1.61e-32 123
Msa0443810 AT5G14750.3 50.420 119 46 3 58 165 18 134 4.06e-32 118
Msa0443810 AT2G26950.1 47.706 109 56 1 19 127 13 120 2.30e-31 122
Msa0443810 AT3G47600.2 49.573 117 54 2 34 149 22 134 2.84e-31 120
Msa0443810 AT1G66380.1 54.808 104 47 0 22 125 8 111 5.54e-31 114
Msa0443810 AT3G27810.2 53.333 90 42 0 55 144 4 93 1.81e-30 114
Msa0443810 AT3G12820.2 72.464 69 19 0 58 126 2 70 2.00e-30 114
Msa0443810 AT1G56650.1 49.180 122 56 1 22 137 8 129 3.17e-30 115
Msa0443810 AT3G60460.1 48.696 115 58 1 18 131 7 121 5.60e-30 116
Msa0443810 AT1G66390.1 56.190 105 44 2 22 125 8 111 1.54e-29 114
Msa0443810 AT5G49620.2 47.500 120 49 1 22 127 26 145 2.57e-29 115
Msa0443810 AT5G40350.2 52.809 89 42 0 53 141 3 91 2.76e-29 110
Msa0443810 AT3G46130.3 55.422 83 37 0 54 136 9 91 5.09e-29 112
Msa0443810 AT5G59780.2 56.098 82 36 0 55 136 20 101 8.12e-29 111
Msa0443810 AT3G46130.4 56.098 82 36 0 55 136 20 101 1.05e-28 111
Msa0443810 AT5G40360.1 45.833 120 62 3 7 126 142 258 1.88e-28 113
Msa0443810 AT3G53200.2 59.211 76 31 0 55 130 9 84 2.89e-27 106
Msa0443810 AT2G39880.1 52.212 113 52 2 13 125 40 150 3.40e-27 110
Msa0443810 AT4G18770.1 44.628 121 65 2 19 138 212 331 3.77e-27 110
Msa0443810 AT3G27785.1 47.222 108 54 2 19 125 184 289 1.63e-26 109
Msa0443810 AT5G67300.1 50.000 102 50 1 24 125 6 106 2.40e-26 106
Msa0443810 AT3G55730.1 44.595 148 77 3 19 166 52 194 1.19e-25 106
Msa0443810 AT4G37260.1 51.961 102 48 1 24 125 13 113 2.02e-25 104
Msa0443810 AT5G58850.1 39.200 125 75 1 22 146 103 226 2.94e-25 105
Msa0443810 AT3G50060.1 44.715 123 66 2 24 146 6 126 3.72e-25 103
Msa0443810 AT3G09230.1 52.427 103 48 1 24 126 55 156 4.59e-25 104
Msa0443810 AT5G11050.1 40.164 122 71 2 24 144 105 225 4.96e-25 105
Msa0443810 AT5G02320.3 46.729 107 56 1 21 127 64 169 1.29e-24 104
Msa0443810 AT5G02320.1 46.729 107 56 1 21 127 124 229 1.38e-24 104
Msa0443810 AT5G02320.2 46.729 107 56 1 21 127 124 229 1.38e-24 104
Msa0443810 AT1G69560.1 39.516 124 72 2 5 127 88 209 3.13e-24 101
Msa0443810 AT3G09370.2 49.038 104 52 1 22 125 133 235 3.47e-24 103
Msa0443810 AT3G09370.1 49.038 104 52 1 22 125 128 230 3.59e-24 103
Msa0443810 AT1G69560.2 39.516 124 72 2 5 127 104 225 4.36e-24 101
Msa0443810 AT3G09370.3 49.038 104 52 1 22 125 141 243 4.57e-24 103
Msa0443810 AT5G11510.3 47.170 106 55 1 21 126 78 182 9.12e-24 102
Msa0443810 AT5G11510.1 47.170 106 55 1 21 126 78 182 9.12e-24 102
Msa0443810 AT5G11510.4 47.170 106 55 1 21 126 78 182 9.12e-24 102
Msa0443810 AT5G11510.2 47.170 106 55 1 21 126 78 182 1.08e-23 102
Msa0443810 AT5G11510.5 47.170 106 55 1 21 126 78 182 1.08e-23 102
Msa0443810 AT2G25230.1 40.496 121 69 2 17 137 19 136 1.09e-23 97.8
Msa0443810 AT3G23250.2 43.200 125 68 2 68 192 1 122 1.76e-23 97.1
Msa0443810 AT1G22640.3 69.492 59 18 0 68 126 1 59 1.87e-23 96.3
Msa0443810 AT2G23290.1 49.020 102 51 1 24 125 13 113 3.87e-23 98.2
Msa0443810 AT1G66380.3 61.111 72 28 0 54 125 7 78 5.92e-23 92.0
Msa0443810 AT1G17950.1 47.059 102 53 1 24 125 5 105 7.37e-23 95.9
Msa0443810 AT5G14750.4 45.872 109 46 3 68 165 1 107 1.06e-22 92.8
Msa0443810 AT5G14750.2 45.872 109 46 3 68 165 1 107 1.06e-22 92.8
Msa0443810 AT1G26780.1 42.342 111 61 2 22 131 96 204 4.16e-22 94.7
Msa0443810 AT1G26780.2 42.342 111 61 2 22 131 96 204 4.46e-22 95.9
Msa0443810 AT4G33450.1 36.090 133 84 1 7 139 2 133 1.76e-21 92.4
Msa0443810 AT4G32730.5 43.396 106 59 1 21 126 84 188 2.13e-21 95.9
Msa0443810 AT4G32730.4 43.396 106 59 1 21 126 84 188 2.13e-21 95.9
Msa0443810 AT4G32730.3 43.396 106 59 1 21 126 84 188 2.13e-21 95.9
Msa0443810 AT4G32730.2 43.396 106 59 1 21 126 84 188 2.13e-21 95.9
Msa0443810 AT4G32730.1 43.396 106 59 1 21 126 84 188 2.26e-21 95.5
Msa0443810 AT5G17800.1 35.036 137 87 2 12 147 81 216 2.18e-20 90.5
Msa0443810 AT1G73410.1 46.154 104 55 1 24 127 6 108 2.66e-20 89.0
Msa0443810 AT2G02820.3 41.584 101 58 1 27 127 33 132 4.35e-20 90.1
Msa0443810 AT1G71030.2 56.061 66 29 0 61 126 5 70 5.22e-20 86.7
Msa0443810 AT2G02820.1 41.584 101 58 1 27 127 33 132 5.24e-20 90.9
Msa0443810 AT2G02820.2 41.584 101 58 1 27 127 33 132 7.21e-20 90.5
Msa0443810 AT1G73410.2 46.154 104 55 1 24 127 6 108 7.24e-20 86.7
Msa0443810 AT1G71030.1 56.061 66 29 0 61 126 19 84 7.68e-20 86.3
Msa0443810 AT3G29020.1 33.846 130 85 1 24 153 65 193 7.80e-20 87.4
Msa0443810 AT3G29020.2 33.846 130 85 1 24 153 67 195 1.64e-19 87.8
Msa0443810 AT1G18960.1 42.857 105 53 4 24 126 10 109 1.85e-19 87.8
Msa0443810 AT5G40430.1 36.937 111 67 3 17 127 47 154 2.68e-19 86.3
Msa0443810 AT4G00540.2 41.284 109 60 2 22 127 101 208 1.22e-18 86.7
Msa0443810 AT4G00540.1 41.284 109 60 2 22 127 99 206 2.14e-18 86.3
Msa0443810 AT1G66380.2 50.633 79 39 0 22 100 8 86 7.59e-18 78.6
Msa0443810 AT1G14350.2 40.594 101 59 1 27 127 28 127 1.49e-17 83.6
Msa0443810 AT1G14350.1 40.594 101 59 1 27 127 28 127 1.49e-17 83.6
Msa0443810 AT5G39700.1 33.884 121 79 1 19 139 51 170 8.75e-15 72.4
Msa0443810 AT2G37630.1 38.947 95 56 1 27 119 7 101 9.55e-15 74.7
Msa0443810 AT4G25560.2 71.111 45 13 0 81 125 3 47 1.93e-14 72.0
Msa0443810 AT5G59780.1 47.368 57 30 0 80 136 1 57 4.22e-14 69.7
Msa0443810 AT3G46130.2 48.214 56 29 0 81 136 2 57 7.81e-14 69.7
Msa0443810 AT1G14350.3 46.774 62 33 0 66 127 23 84 9.84e-13 68.9
Msa0443810 AT1G14350.4 46.774 62 33 0 66 127 23 84 9.84e-13 68.9
Msa0443810 AT3G28910.2 55.319 47 21 0 87 133 1 47 1.96e-11 63.9
Msa0443810 AT1G74650.3 62.500 40 15 0 87 126 1 40 2.79e-11 63.5

Find 140 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACATTATAATCACCAATT+AGG 0.155481 3_3:-15806697 None:intergenic
ACTTGTCTTTGTTTATATTT+TGG 0.168716 3_3:-15807551 None:intergenic
ATTAGTTCTTGTTCATTAAT+TGG 0.192848 3_3:-15806365 None:intergenic
TAGTGATGATTATGGGATTT+TGG 0.233974 3_3:+15806592 Msa0443810:CDS
TAGAAAGTCTAAGAGAAAAT+TGG 0.237860 3_3:-15807388 None:intergenic
ACATTTGTGTATATGCAAAT+TGG 0.244524 3_3:-15807453 None:intergenic
ATTCATTTCCACTCCATTCT+TGG 0.254594 3_3:+15804542 Msa0443810:CDS
GGCAATATGGTTGATGATAT+TGG 0.254643 3_3:+15806563 Msa0443810:CDS
GGGCTTCATAGTGATGATTA+TGG 0.261414 3_3:+15806584 Msa0443810:CDS
ATGCTAATTCTACTTTCTAA+TGG 0.275558 3_3:-15806659 None:intergenic
CACATTATAATCACCAATTA+GGG 0.286005 3_3:-15806696 None:intergenic
CCTCTGATCTCTCTCTAAAT+TGG 0.292372 3_3:+15806946 Msa0443810:three_prime_UTR
TAAAATACCTTATGGAATCT+TGG 0.317280 3_3:+15807499 Msa0443810:three_prime_UTR
TAGATTAATCTAATGGCTAT+AGG 0.317469 3_3:+15807186 Msa0443810:three_prime_UTR
GCAATATGGTTGATGATATT+GGG 0.322671 3_3:+15806564 Msa0443810:CDS
AAAATCAAGAGGAGGAAAAT+AGG 0.323976 3_3:-15806873 None:intergenic
AACTCCAATGAGGACTTGTT+TGG 0.324640 3_3:+15806776 Msa0443810:CDS
AATGAGGACTTGTTTGGGTT+TGG 0.327586 3_3:+15806782 Msa0443810:CDS
TATTATTGAAGTGGTTGTTA+TGG 0.328348 3_3:-15806724 None:intergenic
TTATTAGACAACAAGGAAAA+TGG 0.334913 3_3:-15806479 None:intergenic
CAGGTAGACGTGCTGCAATT+TGG 0.342428 3_3:-15806187 None:intergenic
AGGTAGACGTGCTGCAATTT+GGG 0.345262 3_3:-15806186 None:intergenic
ATTTCTCTATTTGAATTTAA+CGG 0.349533 3_3:+15807030 Msa0443810:three_prime_UTR
TTTAACACAAGTTGGCAATA+TGG 0.356129 3_3:+15806550 Msa0443810:CDS
GGCTTCATAGTGATGATTAT+GGG 0.357696 3_3:+15806585 Msa0443810:CDS
TATCTACCACAACATACAAT+TGG 0.357750 3_3:-15807645 None:intergenic
TCCACTCCATTCTTGGCAAC+AGG 0.366668 3_3:+15804549 Msa0443810:CDS
TTTCTCCTTGAATATCTTTG+TGG 0.371969 3_3:+15807112 Msa0443810:three_prime_UTR
TGGAGTAGAGTTGTTGTTGT+TGG 0.373139 3_3:-15806270 None:intergenic
TTGTTTGGGTTTGGAAATCA+TGG 0.373866 3_3:+15806791 Msa0443810:CDS
AAGAATGGGAGAATGGGATT+TGG 0.378844 3_3:+15806829 Msa0443810:CDS
GAAGATAAGAGTGCCCTAAT+TGG 0.381814 3_3:+15806683 Msa0443810:CDS
AAAATTCTTTATTTCATTGT+CGG 0.387116 3_3:-15806216 None:intergenic
TGCATTCTTTGTGCCCTTGT+GGG 0.388916 3_3:+15807732 Msa0443810:three_prime_UTR
ATACTCTACAACGAACCTTA+TGG 0.395015 3_3:+15806969 Msa0443810:three_prime_UTR
GTGAAGATTAAGAGAAATCA+AGG 0.400765 3_3:-15807357 None:intergenic
GATCTTTGAGAAAGCTATAT+AGG 0.402970 3_3:-15804156 None:intergenic
ACTCCAATGAGGACTTGTTT+GGG 0.403680 3_3:+15806777 Msa0443810:CDS
ACAAGGAAAATGGATCAAAT+TGG 0.406250 3_3:-15806469 None:intergenic
AAAATACCTTATGGAATCTT+GGG 0.410847 3_3:+15807500 Msa0443810:three_prime_UTR
TCCGAAGTGTCACTGTTGTT+TGG 0.430031 3_3:-15806296 None:intergenic
CAGAGGGGACAAGGGGTGAA+TGG 0.434055 3_3:-15806929 None:intergenic
AAAACTTAAGAATGGGAGAA+TGG 0.437647 3_3:+15806822 Msa0443810:CDS
AATTTAACGGTACGTACAAC+CGG 0.438874 3_3:+15807043 Msa0443810:three_prime_UTR
CAAAGATATTCAAGGAGAAA+AGG 0.439458 3_3:-15807109 None:intergenic
TAACTAAAGGACAAGGTTGT+TGG 0.440286 3_3:+15804396 Msa0443810:CDS
TCTTATGAAGAAGCACTTTG+AGG 0.443236 3_3:-15804213 None:intergenic
GCAAGCTAAGGAAAGGGTTA+TGG 0.448835 3_3:+15804336 Msa0443810:CDS
AATGTACCTGTTGCCAAGAA+TGG 0.449357 3_3:-15804555 None:intergenic
CTACAGCCGGCTGCACCATA+AGG 0.454463 3_3:-15806984 None:intergenic
AAACTTAAGAATGGGAGAAT+GGG 0.456783 3_3:+15806823 Msa0443810:CDS
AATAGTTGTTTAACACAAGT+TGG 0.457134 3_3:+15806542 Msa0443810:CDS
GAACTAAAGACAAGAAAGAA+TGG 0.462003 3_3:-15807526 None:intergenic
AAACCCAAACAAGTCCTCAT+TGG 0.462806 3_3:-15806780 None:intergenic
CTCTCTCTCTAATGCAAATG+AGG 0.464940 3_3:+15804267 Msa0443810:exon
GAGGAAACCTGATTTGATCA+TGG 0.466267 3_3:+15804286 Msa0443810:CDS
GTGTATACATAGTCTTGCTT+CGG 0.472005 3_3:+15807702 Msa0443810:three_prime_UTR
GTAAAAGTTGCCGTCTTCGT+TGG 0.474947 3_3:+15804456 Msa0443810:CDS
ACCAACTTCTCATCTTCCTC+AGG 0.478429 3_3:-15804362 None:intergenic
GAGAGAGATCAGAGGGGACA+AGG 0.483920 3_3:-15806938 None:intergenic
GAAAATGGATCAAATTGGTC+AGG 0.485864 3_3:-15806464 None:intergenic
AAGGTGACTAAAATACCTTA+TGG 0.487741 3_3:+15807491 Msa0443810:three_prime_UTR
GATTTCCACAAAGATATTCA+AGG 0.489134 3_3:-15807117 None:intergenic
AATGGGAGAATGGGATTTGG+AGG 0.489531 3_3:+15806832 Msa0443810:CDS
TTCAAATGAAATGTGAATAG+TGG 0.489585 3_3:+15807826 Msa0443810:three_prime_UTR
AGAGATAGAAAGACTTTGAA+AGG 0.490896 3_3:-15807299 None:intergenic
ATCTACCACAACATACAATT+GGG 0.496280 3_3:-15807644 None:intergenic
TGAAGCAACTATTATTGAAG+TGG 0.497587 3_3:-15806733 None:intergenic
ACATATATGTATGAAACAAA+AGG 0.497809 3_3:-15807574 None:intergenic
AATGCGCCGCGCTTAAGATC+AGG 0.500512 3_3:-15804494 None:intergenic
CAAATTGCAGCACGTCTACC+TGG 0.503672 3_3:+15806188 Msa0443810:CDS
CAAAAGAGGCAAATAAATGT+AGG 0.507043 3_3:+15807863 Msa0443810:three_prime_UTR
GCAAGGAGAAAACTTAAGAA+TGG 0.509485 3_3:+15806814 Msa0443810:CDS
TTGCATTCTTTGTGCCCTTG+TGG 0.514381 3_3:+15807731 Msa0443810:three_prime_UTR
ATAGAGGACGAGATCCTCTT+CGG 0.515443 3_3:-15807270 None:intergenic
TCCAAGTCAATGTCTTCTCA+TGG 0.517738 3_3:+15807417 Msa0443810:three_prime_UTR
CAATTTAGAGAGAGATCAGA+GGG 0.520054 3_3:-15806945 None:intergenic
AGAGAGATCAGAGGGGACAA+GGG 0.521321 3_3:-15806937 None:intergenic
AGGAAACCTGATTTGATCAT+GGG 0.522620 3_3:+15804287 Msa0443810:CDS
AGTGACATTGCTAGGAATGC+TGG 0.522915 3_3:+15804419 Msa0443810:CDS
AACTAAAGACAAGAAAGAAT+GGG 0.525033 3_3:-15807525 None:intergenic
CTTTGAAAGGATTGTCATAG+AGG 0.528220 3_3:-15807286 None:intergenic
CAAGGAGAAAACTTAAGAAT+GGG 0.528613 3_3:+15806815 Msa0443810:CDS
ATGAGAAGACATTGACTTGG+AGG 0.530705 3_3:-15807415 None:intergenic
CAGGTATAGTTGTCTACAGC+CGG 0.536191 3_3:-15806997 None:intergenic
AACAAGAGCAAGCTAAGGAA+AGG 0.537747 3_3:+15804329 Msa0443810:CDS
GTGTCACTGTTGTTTGGAGA+TGG 0.538069 3_3:-15806290 None:intergenic
GGGTTTGGAAATCATGGGCA+AGG 0.539922 3_3:+15806797 Msa0443810:CDS
GTTGTTGGAGTGACATTGCT+AGG 0.540759 3_3:+15804411 Msa0443810:CDS
GTAAGATACATGATAACTAA+AGG 0.545634 3_3:+15804383 Msa0443810:CDS
CTAGGAATGCTGGTCTTCAA+AGG 0.546339 3_3:+15804429 Msa0443810:CDS
ACCTGAGGAAGATGAGAAGT+TGG 0.546873 3_3:+15804361 Msa0443810:CDS
TACAACCCAATTGTATGTTG+TGG 0.547350 3_3:+15807639 Msa0443810:three_prime_UTR
CTAATTCTACTTTCTAATGG+AGG 0.556799 3_3:-15806656 None:intergenic
ACAAGAGCAAGCTAAGGAAA+GGG 0.557354 3_3:+15804330 Msa0443810:CDS
ATTACACAAAGTGCTTTACA+AGG 0.561207 3_3:-15807758 None:intergenic
ATTCATCTTTACAATGCAGC+CGG 0.565105 3_3:-15807062 None:intergenic
ATGGGAGAATGGGATTTGGA+GGG 0.566954 3_3:+15806833 Msa0443810:CDS
AACGAACCTTATGGTGCAGC+CGG 0.567251 3_3:+15806978 Msa0443810:three_prime_UTR
ATGCATGTGCATGGATTGCA+TGG 0.568158 3_3:-15806429 None:intergenic
AGTAATTAATCCAACGAAGA+CGG 0.569053 3_3:-15804466 None:intergenic
TGGGTGCCCAAGATTCCATA+AGG 0.570181 3_3:-15807506 None:intergenic
AGAACTAATGACATTATGCA+TGG 0.576802 3_3:+15806379 Msa0443810:CDS
GGAAACTTGTCATGTCATAA+CGG 0.578159 3_3:-15806502 None:intergenic
ACCATGAGAAGACATTGACT+TGG 0.579728 3_3:-15807418 None:intergenic
TTCAAGGAGAAAAGGAAGAG+TGG 0.581796 3_3:-15807101 None:intergenic
ATTTCATTGTCGGTACGACC+AGG 0.583529 3_3:-15806206 None:intergenic
AACCATGGTATGCATGTGCA+TGG 0.586474 3_3:-15806438 None:intergenic
TCCAAACAACAGTGACACTT+CGG 0.586789 3_3:+15806295 Msa0443810:CDS
ATGTCTTCAATCAATATGCA+AGG 0.592778 3_3:+15807472 Msa0443810:three_prime_UTR
ATGATGAGTTCTTCCTCTTG+TGG 0.593884 3_3:-15804521 None:intergenic
TCATTTAGAAATGTCAAAAG+AGG 0.599559 3_3:+15807849 Msa0443810:three_prime_UTR
GAGAGATCAGAGGGGACAAG+GGG 0.603225 3_3:-15806936 None:intergenic
TGTTTGGGTTTGGAAATCAT+GGG 0.605173 3_3:+15806792 Msa0443810:CDS
TTAGCAGTGTTTATAGCACT+AGG 0.605228 3_3:+15807903 Msa0443810:three_prime_UTR
TAGGTAATACTATACACCGT+TGG 0.605293 3_3:+15807205 Msa0443810:three_prime_UTR
TATTTGACATGTCATGAGCA+TGG 0.605554 3_3:-15806523 None:intergenic
CAATTGTTGAATTAATCCAA+CGG 0.606586 3_3:-15807221 None:intergenic
CCAATTTAGAGAGAGATCAG+AGG 0.607332 3_3:-15806946 None:intergenic
AAAAGGTAGATGGGCCGAAG+AGG 0.611350 3_3:+15807256 Msa0443810:three_prime_UTR
TGATGATGAAGTTGATGATG+AGG 0.619533 3_3:-15806405 None:intergenic
AACTAAACTTGAAAATCAAG+AGG 0.620765 3_3:-15806884 None:intergenic
TAAACTTGAAAATCAAGAGG+AGG 0.642017 3_3:-15806881 None:intergenic
ACATTAACAAGAGCAAGCTA+AGG 0.643937 3_3:+15804324 Msa0443810:CDS
CATTGTAAAGATGAATGTAG+AGG 0.647469 3_3:+15807069 Msa0443810:three_prime_UTR
GCTTTACAAGGAAACCCACA+AGG 0.648903 3_3:-15807746 None:intergenic
AATGCTGGTCTTCAAAGGTG+TGG 0.659770 3_3:+15804434 Msa0443810:CDS
ATCCATGCACATGCATACCA+TGG 0.661611 3_3:+15806436 Msa0443810:CDS
TTGAGACCTGATCTTAAGCG+CGG 0.663731 3_3:+15804488 Msa0443810:CDS
TCACATTCAAAACTCCAATG+AGG 0.667734 3_3:+15806766 Msa0443810:CDS
AGGTTGGTACAAATAATCAA+AGG 0.668289 3_3:+15807793 Msa0443810:three_prime_UTR
ACCTGTTGCCAAGAATGGAG+TGG 0.673651 3_3:-15804550 None:intergenic
GAAAGGGTTATGGTCACCTG+AGG 0.691016 3_3:+15804346 Msa0443810:CDS
TACATGATAACTAAAGGACA+AGG 0.707656 3_3:+15804389 Msa0443810:CDS
ATAACGGTTATTAGACAACA+AGG 0.710003 3_3:-15806486 None:intergenic
AAATTGGTCAGGTAAAACCA+TGG 0.714456 3_3:-15806453 None:intergenic
GGAAGTAAGAGGGGTCATAG+CGG 0.749256 3_3:-15807144 None:intergenic
TTATAGCACTAGGAACAATG+TGG 0.760025 3_3:+15807913 Msa0443810:three_prime_UTR
CTTTACAAGGAAACCCACAA+GGG 0.761370 3_3:-15807745 None:intergenic
AATTTAGAGAGAGATCAGAG+GGG 0.794291 3_3:-15806944 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTATATATATTTTTTT+TGG + chr3_3:15805057-15805076 Msa0443810:intron 0.0%
!! AATATTTAAAAAAAAATTAA+GGG - chr3_3:15805333-15805352 None:intergenic 0.0%
!! AAATATTTAAAAAAAAATTA+AGG - chr3_3:15805334-15805353 None:intergenic 0.0%
!!! TTTTTTTAAATATTTTAATT+AGG + chr3_3:15805339-15805358 Msa0443810:intron 0.0%
!! AATTAATTATTTATTTCAGA+AGG + chr3_3:15805126-15805145 Msa0443810:intron 10.0%
!! ATTAATTATTTATTTCAGAA+GGG + chr3_3:15805127-15805146 Msa0443810:intron 10.0%
!! TATATACATATAGAATAATT+TGG + chr3_3:15805467-15805486 Msa0443810:intron 10.0%
!! AAAGTGAATTAAAAAAATAT+AGG - chr3_3:15805759-15805778 None:intergenic 10.0%
!!! TTTTATTTATTACATCTTTT+GGG - chr3_3:15805808-15805827 None:intergenic 10.0%
!!! TTTTTATTTATTACATCTTT+TGG - chr3_3:15805809-15805828 None:intergenic 10.0%
!!! TATCTTTTTATCTTTTTTTT+AGG - chr3_3:15805851-15805870 None:intergenic 10.0%
!! GTTATTCAAAAAAACAATTA+CGG - chr3_3:15804690-15804709 None:intergenic 15.0%
!!! ATATTTTTTTTATCTCTCAA+AGG - chr3_3:15804860-15804879 None:intergenic 15.0%
!! TTAAAACTTCTTGATTAATA+AGG - chr3_3:15804954-15804973 None:intergenic 15.0%
!!! ATATTCATTTTGTTATTGAA+TGG - chr3_3:15804988-15805007 None:intergenic 15.0%
!! TTGAAATTTGATTGAAAATA+GGG + chr3_3:15805505-15805524 Msa0443810:intron 15.0%
!! TCAAATAAAGTTGTTAAAAA+AGG + chr3_3:15805879-15805898 Msa0443810:intron 15.0%
!! ATGCTATACAAAAATTTATA+AGG + chr3_3:15805973-15805992 Msa0443810:intron 15.0%
!! AATTTATAAGGAAATATTGA+AGG + chr3_3:15805985-15806004 Msa0443810:intron 15.0%
!!! GTGTAACTTTTTTTTTTATA+TGG + chr3_3:15806089-15806108 Msa0443810:intron 15.0%
!!! AAAGAAGAAAAATCTAAAAT+AGG - chr3_3:15806128-15806147 None:intergenic 15.0%
!!! ATTTTAGATTTTTCTTCTTT+CGG + chr3_3:15806128-15806147 Msa0443810:intron 15.0%
!!! AAAATTCTTTATTTCATTGT+CGG - chr3_3:15806219-15806238 None:intergenic 15.0%
!!! ACAATGAAATAAAGAATTTT+TGG + chr3_3:15806219-15806238 Msa0443810:CDS 15.0%
!! ATTTCTCTATTTGAATTTAA+CGG + chr3_3:15807030-15807049 Msa0443810:three_prime_UTR 15.0%
!!! AATTGAAATTTTGCTATAAA+AGG + chr3_3:15807239-15807258 Msa0443810:three_prime_UTR 15.0%
!!! TGAATTATGGTTTTAAATTG+TGG - chr3_3:15804727-15804746 None:intergenic 20.0%
!! TATCAATTTCAGTAAAACAA+TGG - chr3_3:15804896-15804915 None:intergenic 20.0%
!!! TTGCTTGAATACTTTTTTAT+TGG - chr3_3:15805039-15805058 None:intergenic 20.0%
!!! TTTTCATTTTTTTGAGAGAA+GGG - chr3_3:15805197-15805216 None:intergenic 20.0%
!! ATAAATCTTAAGATCTTAGT+GGG - chr3_3:15805444-15805463 None:intergenic 20.0%
!! TATAAATCTTAAGATCTTAG+TGG - chr3_3:15805445-15805464 None:intergenic 20.0%
!! GTTGAAATTTGATTGAAAAT+AGG + chr3_3:15805504-15805523 Msa0443810:intron 20.0%
!! TCACTTTGATATTTATTTGA+TGG + chr3_3:15805772-15805791 Msa0443810:intron 20.0%
!! CTTGAATTGAATTAAAAAAC+TGG - chr3_3:15805947-15805966 None:intergenic 20.0%
!! AATAATTTATAAGCTGAAAG+TGG + chr3_3:15806024-15806043 Msa0443810:intron 20.0%
!! AAATGCTAATAATTGAAGAA+GGG - chr3_3:15806057-15806076 None:intergenic 20.0%
!! ACATCAAAAACATTATCTAT+AGG - chr3_3:15806326-15806345 None:intergenic 20.0%
!!! ATTAGTTCTTGTTCATTAAT+TGG - chr3_3:15806368-15806387 None:intergenic 20.0%
!!! ACTTGTCTTTGTTTATATTT+TGG - chr3_3:15807554-15807573 None:intergenic 20.0%
!! ACATATATGTATGAAACAAA+AGG - chr3_3:15807577-15807596 None:intergenic 20.0%
!!! GTTTGTTATATTTTAGTGTT+AGG + chr3_3:15807944-15807963 Msa0443810:three_prime_UTR 20.0%
! GTAAGATACATGATAACTAA+AGG + chr3_3:15804383-15804402 Msa0443810:CDS 25.0%
!! TATTTTCATATTTGAACCCT+AGG + chr3_3:15804620-15804639 Msa0443810:intron 25.0%
! TGTCAAAAAACAAATCTTGA+AGG + chr3_3:15804786-15804805 Msa0443810:intron 25.0%
! GTCAAAAAACAAATCTTGAA+GGG + chr3_3:15804787-15804806 Msa0443810:intron 25.0%
! TCAAAAAACAAATCTTGAAG+GGG + chr3_3:15804788-15804807 Msa0443810:intron 25.0%
!!! CTTTTCATTTTTTTGAGAGA+AGG - chr3_3:15805198-15805217 None:intergenic 25.0%
! ATGTAAGTTAAACTTTCATC+TGG - chr3_3:15805375-15805394 None:intergenic 25.0%
! TAAATCTTAAGATCTTAGTG+GGG - chr3_3:15805443-15805462 None:intergenic 25.0%
! ATTTGATTGAAAATAGGGTT+TGG + chr3_3:15805510-15805529 Msa0443810:intron 25.0%
!! ATAAAGCATATCGATTATTG+AGG + chr3_3:15805695-15805714 Msa0443810:intron 25.0%
! GAAATGCTAATAATTGAAGA+AGG - chr3_3:15806058-15806077 None:intergenic 25.0%
! TTACTATAAACAATCTCAGA+TGG + chr3_3:15806162-15806181 Msa0443810:intron 25.0%
! TTATTAGACAACAAGGAAAA+TGG - chr3_3:15806482-15806501 None:intergenic 25.0%
! AATAGTTGTTTAACACAAGT+TGG + chr3_3:15806542-15806561 Msa0443810:CDS 25.0%
!!! ATTTTGGAGGCTAATAAAAT+GGG + chr3_3:15806608-15806627 Msa0443810:CDS 25.0%
! ATGCTAATTCTACTTTCTAA+TGG - chr3_3:15806662-15806681 None:intergenic 25.0%
! CACATTATAATCACCAATTA+GGG - chr3_3:15806699-15806718 None:intergenic 25.0%
! TCACATTATAATCACCAATT+AGG - chr3_3:15806700-15806719 None:intergenic 25.0%
! TATTATTGAAGTGGTTGTTA+TGG - chr3_3:15806727-15806746 None:intergenic 25.0%
! AACTAAACTTGAAAATCAAG+AGG - chr3_3:15806887-15806906 None:intergenic 25.0%
!! TAGAGAAATTTTCTCTATTC+AGG - chr3_3:15807019-15807038 None:intergenic 25.0%
!! CAGCTTTTAGATTAATCTAA+TGG + chr3_3:15807179-15807198 Msa0443810:three_prime_UTR 25.0%
! TAGATTAATCTAATGGCTAT+AGG + chr3_3:15807186-15807205 Msa0443810:three_prime_UTR 25.0%
! CAATTGTTGAATTAATCCAA+CGG - chr3_3:15807224-15807243 None:intergenic 25.0%
!!! ATTTTGCTATAAAAGGTAGA+TGG + chr3_3:15807246-15807265 Msa0443810:three_prime_UTR 25.0%
!!! TTTTGCTATAAAAGGTAGAT+GGG + chr3_3:15807247-15807266 Msa0443810:three_prime_UTR 25.0%
! TAGAAAGTCTAAGAGAAAAT+TGG - chr3_3:15807391-15807410 None:intergenic 25.0%
! ACATTTGTGTATATGCAAAT+TGG - chr3_3:15807456-15807475 None:intergenic 25.0%
! TAAAATACCTTATGGAATCT+TGG + chr3_3:15807499-15807518 Msa0443810:three_prime_UTR 25.0%
! AAAATACCTTATGGAATCTT+GGG + chr3_3:15807500-15807519 Msa0443810:three_prime_UTR 25.0%
! AACTAAAGACAAGAAAGAAT+GGG - chr3_3:15807528-15807547 None:intergenic 25.0%
!!! TAGTTTTGCAATGAAAATTG+CGG + chr3_3:15807676-15807695 Msa0443810:three_prime_UTR 25.0%
!! AAGCACTTTGTGTAATTTTT+CGG + chr3_3:15807765-15807784 Msa0443810:three_prime_UTR 25.0%
! TTCAAATGAAATGTGAATAG+TGG + chr3_3:15807826-15807845 Msa0443810:three_prime_UTR 25.0%
! TCATTTAGAAATGTCAAAAG+AGG + chr3_3:15807849-15807868 Msa0443810:three_prime_UTR 25.0%
!!! ATTTTAGTGTTAGGTGATAT+AGG + chr3_3:15807953-15807972 Msa0443810:three_prime_UTR 25.0%
! GATCTTTGAGAAAGCTATAT+AGG - chr3_3:15804159-15804178 None:intergenic 30.0%
TACATGATAACTAAAGGACA+AGG + chr3_3:15804389-15804408 Msa0443810:CDS 30.0%
AGTAATTAATCCAACGAAGA+CGG - chr3_3:15804469-15804488 None:intergenic 30.0%
ATCCTAAAATGTAACCAATC+TGG + chr3_3:15805220-15805239 Msa0443810:intron 30.0%
! CAGATTCCAAACCTTTTAAA+GGG + chr3_3:15805300-15805319 Msa0443810:intron 30.0%
! ACATTTCCCTTTAAAAGGTT+TGG - chr3_3:15805309-15805328 None:intergenic 30.0%
CATGCATATTCAATCACATA+AGG + chr3_3:15805392-15805411 Msa0443810:intron 30.0%
AAATCTTAAGATCTTAGTGG+GGG - chr3_3:15805442-15805461 None:intergenic 30.0%
!!! GTCCAACTTTTTTTTTTCGA+GGG + chr3_3:15805532-15805551 Msa0443810:intron 30.0%
TTCCCTCGAAAAAAAAAAGT+TGG - chr3_3:15805537-15805556 None:intergenic 30.0%
!!! AACTTTTTTTTTTCGAGGGA+AGG + chr3_3:15805536-15805555 Msa0443810:intron 30.0%
!!! ACTTTTTTTTTTCGAGGGAA+GGG + chr3_3:15805537-15805556 Msa0443810:intron 30.0%
TAATATGTAACACAGACAGT+TGG - chr3_3:15805569-15805588 None:intergenic 30.0%
! TTTCAATCTTTTCTTCAGTG+TGG - chr3_3:15806249-15806268 None:intergenic 30.0%
AGAACTAATGACATTATGCA+TGG + chr3_3:15806379-15806398 Msa0443810:CDS 30.0%
ACAAGGAAAATGGATCAAAT+TGG - chr3_3:15806472-15806491 None:intergenic 30.0%
ATAACGGTTATTAGACAACA+AGG - chr3_3:15806489-15806508 None:intergenic 30.0%
! TTTAACACAAGTTGGCAATA+TGG + chr3_3:15806550-15806569 Msa0443810:CDS 30.0%
!! GCAATATGGTTGATGATATT+GGG + chr3_3:15806564-15806583 Msa0443810:CDS 30.0%
! TAGTGATGATTATGGGATTT+TGG + chr3_3:15806592-15806611 Msa0443810:CDS 30.0%
!! GATTTTGGAGGCTAATAAAA+TGG + chr3_3:15806607-15806626 Msa0443810:CDS 30.0%
!! TTTTGGAGGCTAATAAAATG+GGG + chr3_3:15806609-15806628 Msa0443810:CDS 30.0%
CTAATTCTACTTTCTAATGG+AGG - chr3_3:15806659-15806678 None:intergenic 30.0%
TGAAGCAACTATTATTGAAG+TGG - chr3_3:15806736-15806755 None:intergenic 30.0%
CAAGGAGAAAACTTAAGAAT+GGG + chr3_3:15806815-15806834 Msa0443810:CDS 30.0%
AAAACTTAAGAATGGGAGAA+TGG + chr3_3:15806822-15806841 Msa0443810:CDS 30.0%
AAACTTAAGAATGGGAGAAT+GGG + chr3_3:15806823-15806842 Msa0443810:CDS 30.0%
AAAATCAAGAGGAGGAAAAT+AGG - chr3_3:15806876-15806895 None:intergenic 30.0%
TAAACTTGAAAATCAAGAGG+AGG - chr3_3:15806884-15806903 None:intergenic 30.0%
CATTGTAAAGATGAATGTAG+AGG + chr3_3:15807069-15807088 Msa0443810:three_prime_UTR 30.0%
CAAAGATATTCAAGGAGAAA+AGG - chr3_3:15807112-15807131 None:intergenic 30.0%
TTTCTCCTTGAATATCTTTG+TGG + chr3_3:15807112-15807131 Msa0443810:three_prime_UTR 30.0%
GATTTCCACAAAGATATTCA+AGG - chr3_3:15807120-15807139 None:intergenic 30.0%
! ATTTTACTGAGGAAGTAAGA+GGG - chr3_3:15807157-15807176 None:intergenic 30.0%
! TAAAAGCTGAGATTTTACTG+AGG - chr3_3:15807168-15807187 None:intergenic 30.0%
AGAGATAGAAAGACTTTGAA+AGG - chr3_3:15807302-15807321 None:intergenic 30.0%
GTGAAGATTAAGAGAAATCA+AGG - chr3_3:15807360-15807379 None:intergenic 30.0%
ATGTCTTCAATCAATATGCA+AGG + chr3_3:15807472-15807491 Msa0443810:three_prime_UTR 30.0%
AAGGTGACTAAAATACCTTA+TGG + chr3_3:15807491-15807510 Msa0443810:three_prime_UTR 30.0%
GAACTAAAGACAAGAAAGAA+TGG - chr3_3:15807529-15807548 None:intergenic 30.0%
!!! ACATTCGTTGTTTCTTTTCT+TGG + chr3_3:15807606-15807625 Msa0443810:three_prime_UTR 30.0%
ATCTACCACAACATACAATT+GGG - chr3_3:15807647-15807666 None:intergenic 30.0%
TATCTACCACAACATACAAT+TGG - chr3_3:15807648-15807667 None:intergenic 30.0%
! ATTACACAAAGTGCTTTACA+AGG - chr3_3:15807761-15807780 None:intergenic 30.0%
!! TGTGTAATTTTTCGGTATGT+AGG + chr3_3:15807773-15807792 Msa0443810:three_prime_UTR 30.0%
!! TAATTTTTCGGTATGTAGGT+TGG + chr3_3:15807777-15807796 Msa0443810:three_prime_UTR 30.0%
!! AGGTTGGTACAAATAATCAA+AGG + chr3_3:15807793-15807812 Msa0443810:three_prime_UTR 30.0%
CAAAAGAGGCAAATAAATGT+AGG + chr3_3:15807863-15807882 Msa0443810:three_prime_UTR 30.0%
!! TCTTATGAAGAAGCACTTTG+AGG - chr3_3:15804216-15804235 None:intergenic 35.0%
! AGGAAACCTGATTTGATCAT+GGG + chr3_3:15804287-15804306 Msa0443810:CDS 35.0%
! TCTTTTCCCATGATCAAATC+AGG - chr3_3:15804296-15804315 None:intergenic 35.0%
ACATTAACAAGAGCAAGCTA+AGG + chr3_3:15804324-15804343 Msa0443810:CDS 35.0%
TAACTAAAGGACAAGGTTGT+TGG + chr3_3:15804396-15804415 Msa0443810:CDS 35.0%
ATTCATTTCCACTCCATTCT+TGG + chr3_3:15804542-15804561 Msa0443810:CDS 35.0%
!! TATGGTGTGGACTAGTTAAA+TGG - chr3_3:15804646-15804665 None:intergenic 35.0%
CACACCATAGCTATAAATTG+CGG + chr3_3:15804657-15804676 Msa0443810:intron 35.0%
AAGACCGCAATTTATAGCTA+TGG - chr3_3:15804664-15804683 None:intergenic 35.0%
CAAAGATACTCTTAGTTGAG+AGG + chr3_3:15804762-15804781 Msa0443810:intron 35.0%
TCCAACAAGACTACTTTGAA+AGG + chr3_3:15804828-15804847 Msa0443810:intron 35.0%
!! TCCTTTCAAAGTAGTCTTGT+TGG - chr3_3:15804832-15804851 None:intergenic 35.0%
!! GTCCAGATTGGTTACATTTT+AGG - chr3_3:15805225-15805244 None:intergenic 35.0%
! GCAGATTCCAAACCTTTTAA+AGG + chr3_3:15805299-15805318 Msa0443810:intron 35.0%
AGGGTACATTTCCCTTTAAA+AGG - chr3_3:15805314-15805333 None:intergenic 35.0%
AATCTTAAGATCTTAGTGGG+GGG - chr3_3:15805441-15805460 None:intergenic 35.0%
!!! GGTCCAACTTTTTTTTTTCG+AGG + chr3_3:15805531-15805550 Msa0443810:intron 35.0%
! TATAAGCATGCTAGGGTTTT+TGG + chr3_3:15805618-15805637 Msa0443810:intron 35.0%
GGCAGCATTAGCTATTATTA+AGG + chr3_3:15805639-15805658 Msa0443810:intron 35.0%
GGTCTATAGCTTTCAACTTA+AGG + chr3_3:15805660-15805679 Msa0443810:intron 35.0%
!! TGATGATGAAGTTGATGATG+AGG - chr3_3:15806408-15806427 None:intergenic 35.0%
AAATTGGTCAGGTAAAACCA+TGG - chr3_3:15806456-15806475 None:intergenic 35.0%
GAAAATGGATCAAATTGGTC+AGG - chr3_3:15806467-15806486 None:intergenic 35.0%
GGAAACTTGTCATGTCATAA+CGG - chr3_3:15806505-15806524 None:intergenic 35.0%
TATTTGACATGTCATGAGCA+TGG - chr3_3:15806526-15806545 None:intergenic 35.0%
!! GGCAATATGGTTGATGATAT+TGG + chr3_3:15806563-15806582 Msa0443810:CDS 35.0%
GGCTTCATAGTGATGATTAT+GGG + chr3_3:15806585-15806604 Msa0443810:CDS 35.0%
! TGATGATTATGGGATTTTGG+AGG + chr3_3:15806595-15806614 Msa0443810:CDS 35.0%
TCACATTCAAAACTCCAATG+AGG + chr3_3:15806766-15806785 Msa0443810:CDS 35.0%
! TTGTTTGGGTTTGGAAATCA+TGG + chr3_3:15806791-15806810 Msa0443810:CDS 35.0%
! TGTTTGGGTTTGGAAATCAT+GGG + chr3_3:15806792-15806811 Msa0443810:CDS 35.0%
GCAAGGAGAAAACTTAAGAA+TGG + chr3_3:15806814-15806833 Msa0443810:CDS 35.0%
AATTTAGAGAGAGATCAGAG+GGG - chr3_3:15806947-15806966 None:intergenic 35.0%
CAATTTAGAGAGAGATCAGA+GGG - chr3_3:15806948-15806967 None:intergenic 35.0%
ATACTCTACAACGAACCTTA+TGG + chr3_3:15806969-15806988 Msa0443810:three_prime_UTR 35.0%
AATTTAACGGTACGTACAAC+CGG + chr3_3:15807043-15807062 Msa0443810:three_prime_UTR 35.0%
ATTCATCTTTACAATGCAGC+CGG - chr3_3:15807065-15807084 None:intergenic 35.0%
! TTTTACTGAGGAAGTAAGAG+GGG - chr3_3:15807156-15807175 None:intergenic 35.0%
! GATTTTACTGAGGAAGTAAG+AGG - chr3_3:15807158-15807177 None:intergenic 35.0%
TAGGTAATACTATACACCGT+TGG + chr3_3:15807205-15807224 Msa0443810:three_prime_UTR 35.0%
! CTTTGAAAGGATTGTCATAG+AGG - chr3_3:15807289-15807308 None:intergenic 35.0%
TACAACCCAATTGTATGTTG+TGG + chr3_3:15807639-15807658 Msa0443810:three_prime_UTR 35.0%
! GTGTATACATAGTCTTGCTT+CGG + chr3_3:15807702-15807721 Msa0443810:three_prime_UTR 35.0%
TTAGCAGTGTTTATAGCACT+AGG + chr3_3:15807903-15807922 Msa0443810:three_prime_UTR 35.0%
TTATAGCACTAGGAACAATG+TGG + chr3_3:15807913-15807932 Msa0443810:three_prime_UTR 35.0%
CTCTCTCTCTAATGCAAATG+AGG + chr3_3:15804267-15804286 Msa0443810:exon 40.0%
! GAGGAAACCTGATTTGATCA+TGG + chr3_3:15804286-15804305 Msa0443810:CDS 40.0%
AACAAGAGCAAGCTAAGGAA+AGG + chr3_3:15804329-15804348 Msa0443810:CDS 40.0%
ACAAGAGCAAGCTAAGGAAA+GGG + chr3_3:15804330-15804349 Msa0443810:CDS 40.0%
ATGATGAGTTCTTCCTCTTG+TGG - chr3_3:15804524-15804543 None:intergenic 40.0%
AATGTACCTGTTGCCAAGAA+TGG - chr3_3:15804558-15804577 None:intergenic 40.0%
!! TGGACTAGTTAAATGGCCTA+GGG - chr3_3:15804639-15804658 None:intergenic 40.0%
CGCAATTTATAGCTATGGTG+TGG - chr3_3:15804659-15804678 None:intergenic 40.0%
GCATTCTGACGTGTGAATTA+TGG - chr3_3:15804740-15804759 None:intergenic 40.0%
GCAGTGAAAATTGTCCAGAT+TGG - chr3_3:15805237-15805256 None:intergenic 40.0%
GGAATCTGCTATTGCTATGA+AGG - chr3_3:15805288-15805307 None:intergenic 40.0%
ATCTTAAGATCTTAGTGGGG+GGG - chr3_3:15805440-15805459 None:intergenic 40.0%
!!! TTTTTTTCGAGGGAAGGGTT+TGG + chr3_3:15805542-15805561 Msa0443810:intron 40.0%
ACGTAGCATATAAGCATGCT+AGG + chr3_3:15805610-15805629 Msa0443810:intron 40.0%
CGTAGCATATAAGCATGCTA+GGG + chr3_3:15805611-15805630 Msa0443810:intron 40.0%
! TGGAGTAGAGTTGTTGTTGT+TGG - chr3_3:15806273-15806292 None:intergenic 40.0%
TCCAAACAACAGTGACACTT+CGG + chr3_3:15806295-15806314 Msa0443810:CDS 40.0%
GGGCTTCATAGTGATGATTA+TGG + chr3_3:15806584-15806603 Msa0443810:CDS 40.0%
!! GAAGATAAGAGTGCCCTAAT+TGG + chr3_3:15806683-15806702 Msa0443810:CDS 40.0%
! AACTCCAATGAGGACTTGTT+TGG + chr3_3:15806776-15806795 Msa0443810:CDS 40.0%
! ACTCCAATGAGGACTTGTTT+GGG + chr3_3:15806777-15806796 Msa0443810:CDS 40.0%
AAACCCAAACAAGTCCTCAT+TGG - chr3_3:15806783-15806802 None:intergenic 40.0%
! AATGAGGACTTGTTTGGGTT+TGG + chr3_3:15806782-15806801 Msa0443810:CDS 40.0%
AAGAATGGGAGAATGGGATT+TGG + chr3_3:15806829-15806848 Msa0443810:CDS 40.0%
CCAATTTAGAGAGAGATCAG+AGG - chr3_3:15806949-15806968 None:intergenic 40.0%
CCTCTGATCTCTCTCTAAAT+TGG + chr3_3:15806946-15806965 Msa0443810:three_prime_UTR 40.0%
TTCAAGGAGAAAAGGAAGAG+TGG - chr3_3:15807104-15807123 None:intergenic 40.0%
!! ATGAGAAGACATTGACTTGG+AGG - chr3_3:15807418-15807437 None:intergenic 40.0%
TCCAAGTCAATGTCTTCTCA+TGG + chr3_3:15807417-15807436 Msa0443810:three_prime_UTR 40.0%
! ACCATGAGAAGACATTGACT+TGG - chr3_3:15807421-15807440 None:intergenic 40.0%
CTTTACAAGGAAACCCACAA+GGG - chr3_3:15807748-15807767 None:intergenic 40.0%
GCAAGCTAAGGAAAGGGTTA+TGG + chr3_3:15804336-15804355 Msa0443810:CDS 45.0%
ACCTGAGGAAGATGAGAAGT+TGG + chr3_3:15804361-15804380 Msa0443810:CDS 45.0%
ACCAACTTCTCATCTTCCTC+AGG - chr3_3:15804365-15804384 None:intergenic 45.0%
GTTGTTGGAGTGACATTGCT+AGG + chr3_3:15804411-15804430 Msa0443810:CDS 45.0%
AGTGACATTGCTAGGAATGC+TGG + chr3_3:15804419-15804438 Msa0443810:CDS 45.0%
!! CTAGGAATGCTGGTCTTCAA+AGG + chr3_3:15804429-15804448 Msa0443810:CDS 45.0%
!! AATGCTGGTCTTCAAAGGTG+TGG + chr3_3:15804434-15804453 Msa0443810:CDS 45.0%
GTAAAAGTTGCCGTCTTCGT+TGG + chr3_3:15804456-15804475 Msa0443810:CDS 45.0%
TTGAGACCTGATCTTAAGCG+CGG + chr3_3:15804488-15804507 Msa0443810:CDS 45.0%
!! GTGGACTAGTTAAATGGCCT+AGG - chr3_3:15804640-15804659 None:intergenic 45.0%
AGGTAGACGTGCTGCAATTT+GGG - chr3_3:15806189-15806208 None:intergenic 45.0%
ATTTCATTGTCGGTACGACC+AGG - chr3_3:15806209-15806228 None:intergenic 45.0%
! GTGTCACTGTTGTTTGGAGA+TGG - chr3_3:15806293-15806312 None:intergenic 45.0%
! TCCGAAGTGTCACTGTTGTT+TGG - chr3_3:15806299-15806318 None:intergenic 45.0%
! ATGCATGTGCATGGATTGCA+TGG - chr3_3:15806432-15806451 None:intergenic 45.0%
ATCCATGCACATGCATACCA+TGG + chr3_3:15806436-15806455 Msa0443810:CDS 45.0%
AACCATGGTATGCATGTGCA+TGG - chr3_3:15806441-15806460 None:intergenic 45.0%
AATGGGAGAATGGGATTTGG+AGG + chr3_3:15806832-15806851 Msa0443810:CDS 45.0%
ATGGGAGAATGGGATTTGGA+GGG + chr3_3:15806833-15806852 Msa0443810:CDS 45.0%
CAGGTATAGTTGTCTACAGC+CGG - chr3_3:15807000-15807019 None:intergenic 45.0%
ATAGAGGACGAGATCCTCTT+CGG - chr3_3:15807273-15807292 None:intergenic 45.0%
TTGCATTCTTTGTGCCCTTG+TGG + chr3_3:15807731-15807750 Msa0443810:three_prime_UTR 45.0%
TGCATTCTTTGTGCCCTTGT+GGG + chr3_3:15807732-15807751 Msa0443810:three_prime_UTR 45.0%
GCTTTACAAGGAAACCCACA+AGG - chr3_3:15807749-15807768 None:intergenic 45.0%
GAAAGGGTTATGGTCACCTG+AGG + chr3_3:15804346-15804365 Msa0443810:CDS 50.0%
TCCACTCCATTCTTGGCAAC+AGG + chr3_3:15804549-15804568 Msa0443810:CDS 50.0%
ACCTGTTGCCAAGAATGGAG+TGG - chr3_3:15804553-15804572 None:intergenic 50.0%
TTGAGGTCTGTCTTGTGCAG+TGG + chr3_3:15805712-15805731 Msa0443810:intron 50.0%
CAGGTAGACGTGCTGCAATT+TGG - chr3_3:15806190-15806209 None:intergenic 50.0%
CAAATTGCAGCACGTCTACC+TGG + chr3_3:15806188-15806207 Msa0443810:CDS 50.0%
GGGTTTGGAAATCATGGGCA+AGG + chr3_3:15806797-15806816 Msa0443810:CDS 50.0%
AGAGAGATCAGAGGGGACAA+GGG - chr3_3:15806940-15806959 None:intergenic 50.0%
AACGAACCTTATGGTGCAGC+CGG + chr3_3:15806978-15806997 Msa0443810:three_prime_UTR 50.0%
GGAAGTAAGAGGGGTCATAG+CGG - chr3_3:15807147-15807166 None:intergenic 50.0%
AAAAGGTAGATGGGCCGAAG+AGG + chr3_3:15807256-15807275 Msa0443810:three_prime_UTR 50.0%
TGGGTGCCCAAGATTCCATA+AGG - chr3_3:15807509-15807528 None:intergenic 50.0%
AATGCGCCGCGCTTAAGATC+AGG - chr3_3:15804497-15804516 None:intergenic 55.0%
GAGAGATCAGAGGGGACAAG+GGG - chr3_3:15806939-15806958 None:intergenic 55.0%
GAGAGAGATCAGAGGGGACA+AGG - chr3_3:15806941-15806960 None:intergenic 55.0%
! CGGCGCATTTTCGCCACAAG+AGG + chr3_3:15804508-15804527 Msa0443810:CDS 60.0%
CAGAGGGGACAAGGGGTGAA+TGG - chr3_3:15806932-15806951 None:intergenic 60.0%
CTACAGCCGGCTGCACCATA+AGG - chr3_3:15806987-15807006 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 15804122 15807995 15804122 ID=Msa0443810;Name=Msa0443810
chr3_3 mRNA 15804122 15807995 15804122 ID=Msa0443810-mRNA-1;Parent=Msa0443810;Name=Msa0443810-mRNA-1;_AED=0.03;_eAED=0.03;_QI=156|1|1|1|1|1|2|1091|338
chr3_3 exon 15804122 15804570 15804122 ID=Msa0443810-mRNA-1:exon:3322;Parent=Msa0443810-mRNA-1
chr3_3 exon 15806181 15807995 15806181 ID=Msa0443810-mRNA-1:exon:3323;Parent=Msa0443810-mRNA-1
chr3_3 five_prime_UTR 15804122 15804277 15804122 ID=Msa0443810-mRNA-1:five_prime_utr;Parent=Msa0443810-mRNA-1
chr3_3 CDS 15804278 15804570 15804278 ID=Msa0443810-mRNA-1:cds;Parent=Msa0443810-mRNA-1
chr3_3 CDS 15806181 15806904 15806181 ID=Msa0443810-mRNA-1:cds;Parent=Msa0443810-mRNA-1
chr3_3 three_prime_UTR 15806905 15807995 15806905 ID=Msa0443810-mRNA-1:three_prime_utr;Parent=Msa0443810-mRNA-1
Gene Sequence

>Msa0443810

ATGCAAATGAGGAAACCTGATTTGATCATGGGAAAAGACAACAACAACATTAACAAGAGCAAGCTAAGGAAAGGGTTATGGTCACCTGAGGAAGATGAGAAGTTGGTAAGATACATGATAACTAAAGGACAAGGTTGTTGGAGTGACATTGCTAGGAATGCTGGTCTTCAAAGGTGTGGTAAAAGTTGCCGTCTTCGTTGGATTAATTACTTGAGACCTGATCTTAAGCGCGGCGCATTTTCGCCACAAGAGGAAGAACTCATCATTCATTTCCACTCCATTCTTGGCAACAGATGGTCCCAAATTGCAGCACGTCTACCTGGTCGTACCGACAATGAAATAAAGAATTTTTGGAATTCCACACTGAAGAAAAGATTGAAAACCAACAACAACAACTCTACTCCATCTCCAAACAACAGTGACACTTCGGATCAACCTATAGATAATGTTTTTGATGTGAAAAATAACATGATCATGCCAATTAATGAACAAGAACTAATGACATTATGCATGGATTCCTCATCATCAACTTCATCATCATCCATGCAATCCATGCACATGCATACCATGGTTTTACCTGACCAATTTGATCCATTTTCCTTGTTGTCTAATAACCGTTATGACATGACAAGTTTCCATGCTCATGACATGTCAAATAGTTGTTTAACACAAGTTGGCAATATGGTTGATGATATTGGGCTTCATAGTGATGATTATGGGATTTTGGAGGCTAATAAAATGGGGTTATTAGAAAATGATTTTGAACTTCCTCCATTAGAAAGTAGAATTAGCATTGAAGATAAGAGTGCCCTAATTGGTGATTATAATGTGAAAAGCCATAACAACCACTTCAATAATAGTTGCTTCAATAACACTAATCACATTCAAAACTCCAATGAGGACTTGTTTGGGTTTGGAAATCATGGGCAAGGAGAAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTTTGATGCAAGACATATCCTATTTTCCTCCTCTTGATTTTCAAGTTTAG
Protein sequence

>Msa0443810

MQMRKPDLIMGKDNNNINKSKLRKGLWSPEEDEKLVRYMITKGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRLKTNNNNSTPSPNNSDTSDQPIDNVFDVKNNMIMPINEQELMTLCMDSSSSTSSSSMQSMHMHTMVLPDQFDPFSLLSNNRYDMTSFHAHDMSNSCLTQVGNMVDDIGLHSDDYGILEANKMGLLENDFELPPLESRISIEDKSALIGDYNVKSHNNHFNNSCFNNTNHIQNSNEDLFGFGNHGQGENLRMGEWDLEGLMQDISYFPPLDFQV*