AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0454580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0454580 MtrunA17_Chr3g0101051 97.899 1380 28 1 1 1379 2 1381 0.0 2833
Msa0454580 MtrunA17_Chr6g0487241 72.050 161 40 3 573 732 1 157 7.74e-66 219
Msa0454580 MtrunA17_Chr5g0414351 23.188 414 269 11 51 459 155 524 7.07e-13 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0454580 AT5G55540.1 66.257 1384 450 9 4 1379 6 1380 0.0 1870
Msa0454580 AT5G55540.2 64.668 1384 445 10 4 1379 6 1353 0.0 1810
Msa0454580 AT1G10510.1 24.259 371 244 10 121 461 162 525 7.14e-14 77.0
Msa0454580 AT1G10510.1 25.517 290 196 6 100 380 197 475 4.62e-13 74.3

Find 271 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGAAATGTTTATGTTTA+TGG 0.116193 3_3:+45979861 None:intergenic
TCTTTGATCAAATCCATTTC+TGG 0.176671 3_3:+45978572 None:intergenic
GCATTGTTGTCCTGCTCTTT+TGG 0.181227 3_3:+45977688 None:intergenic
CTCATTTCAATCAGCATTAA+TGG 0.187721 3_3:-45976173 Msa0454580:CDS
CTCGATCGGATTCTCAAATA+TGG 0.193162 3_3:+45977320 None:intergenic
TTTACTTGCTTCTTCACTTA+TGG 0.195146 3_3:-45979557 Msa0454580:CDS
CTGATCACCACCATGGTTTC+TGG 0.216059 3_3:-45975411 Msa0454580:CDS
AGGAAATGCTGTGTAGATTT+TGG 0.217443 3_3:+45979932 None:intergenic
AGAACACCTTTACATAATTC+TGG 0.246215 3_3:-45978644 Msa0454580:CDS
GCGCAAAATCAAACCCTTCT+TGG 0.261347 3_3:+45975826 None:intergenic
GCAACTGCAGCTGGTGTTGT+AGG 0.266692 3_3:-45975123 Msa0454580:CDS
AATTACATGTAGCAGGAAAT+TGG 0.270647 3_3:-45979033 Msa0454580:CDS
CATAATTCTGGAGAGTCTAT+TGG 0.275346 3_3:-45978632 Msa0454580:CDS
ACCTCTTATATCTGCAGTTT+TGG 0.276444 3_3:-45979395 Msa0454580:CDS
ATCAAATCCATTTCTGGTTC+AGG 0.279533 3_3:+45978578 None:intergenic
ACCATGAACTTCTTCATATA+TGG 0.293141 3_3:+45975270 None:intergenic
TTCCTCAACTTGTGCATTGA+AGG 0.294852 3_3:+45975488 None:intergenic
GCCTTCTGACATTCAACTTT+AGG 0.296582 3_3:+45977153 None:intergenic
AGTTTGAAATGTGTTACTTT+GGG 0.297713 3_3:-45978935 Msa0454580:CDS
CGCTTCTCTTTGGTGCAGCC+GGG 0.297890 3_3:-45975146 Msa0454580:CDS
TTGAAGAGGATTTGCAATAT+TGG 0.298003 3_3:-45977733 Msa0454580:CDS
GTTTGGAGGAGTTGCAGATT+TGG 0.298424 3_3:-45979525 Msa0454580:CDS
GAGCAAGGAAGTGGCTCATT+TGG 0.298435 3_3:-45975178 Msa0454580:CDS
AATGGATGGTTGATTTCTTA+AGG 0.304447 3_3:-45975023 Msa0454580:CDS
AGGATTCTTCCCTCGCTTAC+AGG 0.305620 3_3:-45976811 Msa0454580:intron
TGTAGGGTTGCTTGTTCCTT+AGG 0.305998 3_3:-45979244 Msa0454580:CDS
GTCAAACTTTGCACACATTC+AGG 0.308345 3_3:+45975984 None:intergenic
TCGTTATATTGAGTTTATTC+AGG 0.311199 3_3:-45977793 Msa0454580:CDS
TGGAGTCCGGTCTTGGATTC+TGG 0.317434 3_3:-45975861 Msa0454580:CDS
GGTGGCTCTTCGCTTCTCTT+TGG 0.319305 3_3:-45975156 Msa0454580:CDS
TTATGGAGTTGTTTGTTTCT+TGG 0.321100 3_3:+45979878 None:intergenic
AAAGATATTGCAGAGAAGTT+TGG 0.325496 3_3:-45974979 Msa0454580:CDS
TTTGGAGGAGTTGCAGATTT+GGG 0.328085 3_3:-45979524 Msa0454580:CDS
TTTCTCAGCTTCATTGCTTA+AGG 0.331927 3_3:+45975677 None:intergenic
AAGGATTTCTTGTTTCAAAT+AGG 0.332981 3_3:+45974865 None:intergenic
TCGCTTCTCTTTGGTGCAGC+CGG 0.339989 3_3:-45975147 Msa0454580:CDS
TTGGGATTTATCAGAGATTA+GGG 0.342048 3_3:-45978613 Msa0454580:CDS
GATAAACTCGTGGTACTCTT+TGG 0.342219 3_3:+45977450 None:intergenic
ACTTATGGTGAATCATAGTT+TGG 0.344900 3_3:-45979542 Msa0454580:CDS
ATTGGGATTTATCAGAGATT+AGG 0.351652 3_3:-45978614 Msa0454580:CDS
CAACTGCAGCTGGTGTTGTA+GGG 0.359162 3_3:-45975122 Msa0454580:CDS
ATAATTCTGGAGAGTCTATT+GGG 0.359329 3_3:-45978631 Msa0454580:CDS
TCCTTTGGTGGCATTGCAAA+AGG 0.365823 3_3:-45975645 Msa0454580:CDS
AGTTGGTTGGGAAAGGTAGA+AGG 0.368124 3_3:+45979912 None:intergenic
GCTCATCTTGCAGCTGGAAT+GGG 0.371188 3_3:-45975219 Msa0454580:CDS
GGAAGTCATCATCCGATAAA+AGG 0.376093 3_3:+45975799 None:intergenic
TGTGAGAATGATGCTAAAAC+TGG 0.376260 3_3:-45977003 Msa0454580:CDS
TTCAATTATCTCTGCAGATC+TGG 0.377228 3_3:+45974891 None:intergenic
AGCAAGGAAGTGGCTCATTT+GGG 0.378472 3_3:-45975177 Msa0454580:CDS
AGCTCATCTTGCAGCTGGAA+TGG 0.379937 3_3:-45975220 Msa0454580:CDS
TTTGACCCCATACCAGGAAT+TGG 0.380446 3_3:+45977056 None:intergenic
GCACACATGGAGTCCGGTCT+TGG 0.386550 3_3:-45975868 Msa0454580:CDS
TGAAAATCCTGAACCAGAAA+TGG 0.389486 3_3:-45978585 Msa0454580:CDS
GCCACTTCCTTGCTCAAATC+TGG 0.391496 3_3:+45975186 None:intergenic
AATGAGACGGTGACACGGTT+CGG 0.392545 3_3:-45978851 Msa0454580:CDS
TCCTCTACCTTCTTCAAGAA+TGG 0.393754 3_3:+45976926 None:intergenic
CAGATTTGGGAAGATTCAAT+AGG 0.394441 3_3:-45979511 Msa0454580:CDS
CAAGGTTGTAAAGGTGTTCA+AGG 0.394744 3_3:-45978737 Msa0454580:CDS
TAACATGGCTGTGAAGTCTT+TGG 0.395233 3_3:-45975295 Msa0454580:CDS
TTTAGAAGAAACAGGTTCAA+TGG 0.396164 3_3:-45979676 Msa0454580:CDS
TAGTTTGAAATGTGTTACTT+TGG 0.396559 3_3:-45978936 Msa0454580:CDS
ATGGATGGTTGATTTCTTAA+GGG 0.398061 3_3:-45975022 Msa0454580:CDS
TCAAACCCTTCTTGGAGAAT+AGG 0.399155 3_3:+45975834 None:intergenic
ACACCTTCACAACAAAATAA+AGG 0.403888 3_3:-45976240 Msa0454580:CDS
ATTTCAATATGGAATCTTGC+TGG 0.404539 3_3:-45977881 Msa0454580:CDS
TTGCTTGATGAGACCATTGT+AGG 0.408705 3_3:+45979971 None:intergenic
GACTGTGGCGAGTAAGGTAT+AGG 0.411733 3_3:-45974957 Msa0454580:CDS
ATGATGCTAATGTTGCTAAA+AGG 0.413163 3_3:+45979815 None:intergenic
CTGCTATCGGTCATAGAAAC+AGG 0.413634 3_3:-45975095 Msa0454580:CDS
AGGATTTGCAATATTGGCTT+AGG 0.417926 3_3:-45977727 Msa0454580:CDS
GAATCATGTATTGGTTCTGT+TGG 0.419627 3_3:-45979586 Msa0454580:CDS
TGGAGTTTCACAAAGTTGAA+TGG 0.420095 3_3:-45979762 Msa0454580:CDS
GAACCATGGAAGTTCATGTT+TGG 0.420107 3_3:-45979363 Msa0454580:CDS
GCTATGAAGTGGAAGGAGTT+TGG 0.421009 3_3:-45977365 Msa0454580:CDS
AGGATACAAAGATTTCAATA+TGG 0.424721 3_3:-45977892 Msa0454580:CDS
ATGAGACGGTGACACGGTTC+GGG 0.425729 3_3:-45978850 Msa0454580:CDS
ACAAAGTCCAATTCCTGGTA+TGG 0.427215 3_3:-45977063 Msa0454580:CDS
GTAACAAGTTGAAGTTGGTT+GGG 0.427639 3_3:+45979900 None:intergenic
AAGGTTGTTGAGTTTGTACC+TGG 0.430964 3_3:-45979310 Msa0454580:CDS
ACCTGCGATGAAGCACTTCT+CGG 0.431159 3_3:+45975778 None:intergenic
TGTCAGAAGGCAACAATCTT+CGG 0.431407 3_3:-45977141 Msa0454580:CDS
AACTGTGAAATTCATTCCTA+AGG 0.437895 3_3:+45979228 None:intergenic
GAGAAAGTTGAACCATCCTT+TGG 0.439001 3_3:-45975660 Msa0454580:CDS
AAAACAATGGATTCATTAGT+AGG 0.439101 3_3:-45977118 Msa0454580:CDS
ATCGACGCACTACCGCTACC+TGG 0.440012 3_3:+45977821 None:intergenic
AATAGGAAGGGATGGTTTAG+TGG 0.442776 3_3:-45978897 Msa0454580:CDS
GTGCTTGTTTCAGTTGCTGC+AGG 0.444508 3_3:+45975928 None:intergenic
CGTCAACTGTGAATACAGTT+TGG 0.446323 3_3:+45977537 None:intergenic
GGAGTTTCACAAAGTTGAAT+GGG 0.446865 3_3:-45979761 Msa0454580:CDS
TTTACAAAATAGAACATGTT+CGG 0.450499 3_3:+45975456 None:intergenic
GGAAATTGGTTCCGCGGAAT+CGG 0.450926 3_3:-45979019 Msa0454580:CDS
AGTGTGCTAAGGAATTTAGA+TGG 0.451740 3_3:-45979168 Msa0454580:CDS
AAGAACATGTCTGAAAGATA+AGG 0.451824 3_3:-45979104 Msa0454580:CDS
AGTTTACAAAGTCCAATTCC+TGG 0.452290 3_3:-45977068 Msa0454580:CDS
GCAGCCGGGGCAACTGCAGC+TGG 0.461917 3_3:-45975132 Msa0454580:CDS
AACTCCTTCCACTTCATAGC+TGG 0.462416 3_3:+45977368 None:intergenic
GGCAAACACTTTGAATCGCC+GGG 0.464630 3_3:+45976039 None:intergenic
AGAACATGTCTGAAAGATAA+GGG 0.466224 3_3:-45979103 Msa0454580:CDS
TAATCATACATGCTGTCTGC+TGG 0.466276 3_3:+45975894 None:intergenic
GGTAACAAGTTGAAGTTGGT+TGG 0.467768 3_3:+45979899 None:intergenic
AAGAAAACTCTGCAACTCTT+AGG 0.467893 3_3:+45978533 None:intergenic
AGATTGAGAGACAAGTTTCA+AGG 0.468901 3_3:-45977575 Msa0454580:CDS
AGTTTGGACTGTGGCGAGTA+AGG 0.469872 3_3:-45974963 Msa0454580:CDS
GTTTGGAGTGGTGATCAAAA+TGG 0.470838 3_3:-45979346 Msa0454580:CDS
GGCATTGTGTATATTGCTGC+TGG 0.472498 3_3:-45979082 Msa0454580:CDS
GTTCATAATATCTTAGCCCT+TGG 0.473223 3_3:+45975556 None:intergenic
CAAAGTCCAATTCCTGGTAT+GGG 0.476100 3_3:-45977062 Msa0454580:CDS
GAACTTGAGAAAATCTTAAG+AGG 0.476785 3_3:-45977092 Msa0454580:CDS
TGGTTGATTTCTTAAGGGAA+AGG 0.477175 3_3:-45975017 Msa0454580:CDS
ATTCCTTCCATTCTTGAAGA+AGG 0.478294 3_3:-45976933 Msa0454580:CDS
CCTTTGGTGGCATTGCAAAA+GGG 0.478587 3_3:-45975644 Msa0454580:CDS
CTCCATGATCTTATGTTCCC+AGG 0.480380 3_3:-45977839 Msa0454580:CDS
ATCGGAGCTCATCTTGCAGC+TGG 0.483084 3_3:-45975225 Msa0454580:CDS
ATTCTTAATGTATTGTTCCC+AGG 0.488933 3_3:+45979292 None:intergenic
TCCATATATGAAGAAGTTCA+TGG 0.489278 3_3:-45975271 Msa0454580:CDS
GTTGTAGGGGCTGCTGCTAT+CGG 0.491746 3_3:-45975108 Msa0454580:CDS
AACTGCAGCTGGTGTTGTAG+GGG 0.492310 3_3:-45975121 Msa0454580:CDS
CTTTGGTGGCATTGCAAAAG+GGG 0.493158 3_3:-45975643 Msa0454580:CDS
ATCACATTCAAGATGGCGTC+CGG 0.494478 3_3:+45976860 None:intergenic
GTTGAGCTTGGAGGACAACT+AGG 0.494771 3_3:-45976137 Msa0454580:CDS
GCCAAAACTGCAGATATAAG+AGG 0.495083 3_3:+45979394 None:intergenic
AGTTGAATGGGAATCACAAC+AGG 0.499162 3_3:-45979749 Msa0454580:CDS
ATTGAGTTCTTCTGTACCTA+GGG 0.499869 3_3:+45975958 None:intergenic
CGTCCGGCATAAAGACAGTC+TGG 0.500594 3_3:+45976876 None:intergenic
TTGAAATGTTTGTCTTTACA+AGG 0.502527 3_3:-45978755 Msa0454580:CDS
TCGATCGGATTCTCAAATAT+GGG 0.502774 3_3:+45977321 None:intergenic
CTTTATTATAATGTCTCGAT+CGG 0.503330 3_3:+45977306 None:intergenic
TACCCTACTTGGATCAAGTA+AGG 0.505509 3_3:-45977982 Msa0454580:CDS
CGATTCAAAGTGTTTGCCAT+GGG 0.506288 3_3:-45976034 Msa0454580:CDS
ATTGTTAACAGCTTAAGAGA+TGG 0.507649 3_3:+45979445 None:intergenic
AATAGTGAATCCAGTGGAGC+AGG 0.510322 3_3:-45977957 Msa0454580:CDS
TTCAGCGGCACTACCCTACT+TGG 0.511010 3_3:-45977993 Msa0454580:CDS
GTCCTTACTTGATCCAAGTA+GGG 0.512812 3_3:+45977980 None:intergenic
GTTTCCAATTCCAAAAGAGC+AGG 0.513081 3_3:-45977698 Msa0454580:CDS
TGGCAAACACTTTGAATCGC+CGG 0.514179 3_3:+45976038 None:intergenic
AGATCAATTTCTTCAATCCA+AGG 0.517939 3_3:+45978671 None:intergenic
AGGGAAAGGAGGTGTTCCAC+AGG 0.522993 3_3:-45975003 Msa0454580:CDS
CATTAATGCTGATTGAAATG+AGG 0.525756 3_3:+45976174 None:intergenic
GTTTGAAATGTGTTACTTTG+GGG 0.525788 3_3:-45978934 Msa0454580:CDS
ACCAGATTTGAGCAAGGAAG+TGG 0.525989 3_3:-45975187 Msa0454580:CDS
GTGTGCTAAGGAATTTAGAT+GGG 0.527357 3_3:-45979167 Msa0454580:CDS
AATTGAGTTCTTCTGTACCT+AGG 0.527777 3_3:+45975957 None:intergenic
TGTCCTTACTTGATCCAAGT+AGG 0.528039 3_3:+45977979 None:intergenic
TTGTCTTTACAAGGTTGTAA+AGG 0.528673 3_3:-45978746 Msa0454580:CDS
TCCGAGAAGTGCTTCATCGC+AGG 0.529629 3_3:-45975779 Msa0454580:CDS
TCGACGCACTACCGCTACCT+GGG 0.530432 3_3:+45977822 None:intergenic
AACCTTCAATGCACAAGTTG+AGG 0.532208 3_3:-45975490 Msa0454580:CDS
GAGGGAGAACAAGAATAGGA+AGG 0.533094 3_3:-45978910 Msa0454580:CDS
ACAAAACCAAACCCTAAAAG+AGG 0.534302 3_3:-45979137 Msa0454580:CDS
GAGCAGGCTGTCAAAACAGT+TGG 0.534744 3_3:-45977941 Msa0454580:CDS
AATACCTTTGACCCCATACC+AGG 0.534830 3_3:+45977050 None:intergenic
GGGACAATGGTCAGATTGCA+TGG 0.535141 3_3:-45974936 Msa0454580:CDS
ATCACAAAATCTGCAGCAAA+CGG 0.535719 3_3:-45977612 Msa0454580:CDS
GATAAAATCAAAGTGTGCTA+AGG 0.538432 3_3:-45979179 Msa0454580:CDS
TGTAAGCGAGGGAAGAATCC+TGG 0.539506 3_3:+45976813 None:intergenic
TCTTGGTAACAAGTTGAAGT+TGG 0.540060 3_3:+45979895 None:intergenic
TCCATTCTTGAAGAAGGTAG+AGG 0.540987 3_3:-45976927 Msa0454580:CDS
AGACACTTCAGATAAATCCT+TGG 0.541930 3_3:-45978688 Msa0454580:CDS
GCTTCTCTTTGGTGCAGCCG+GGG 0.542369 3_3:-45975145 Msa0454580:CDS
GGTAGGCCTATTCTCCAAGA+AGG 0.542554 3_3:-45975840 Msa0454580:CDS
GACTCTCCAGAATTATGTAA+AGG 0.543966 3_3:+45978638 None:intergenic
TTGAAATGTGTTACTTTGGG+GGG 0.544048 3_3:-45978932 Msa0454580:CDS
CTACCTTCTTCAAGAATGGA+AGG 0.544381 3_3:+45976930 None:intergenic
CAACAACATGCATTTGTCCT+CGG 0.544654 3_3:+45975352 None:intergenic
TGCTAATGTTGCTAAAAGGT+TGG 0.545609 3_3:+45979819 None:intergenic
AACACCAGCTGCAGTTGCCC+CGG 0.545986 3_3:+45975128 None:intergenic
AAGTTGAAGTTGGTTGGGAA+AGG 0.546265 3_3:+45979905 None:intergenic
TTATCAGCACACATGGAGTC+CGG 0.549633 3_3:-45975874 Msa0454580:CDS
TACATGATGATGAGAGTTTG+AGG 0.549768 3_3:-45978826 Msa0454580:CDS
AATGCCTCTTGAACCTTCCG+CGG 0.550135 3_3:+45975071 None:intergenic
AATTCCTGGTATGGGGTCAA+AGG 0.551237 3_3:-45977054 Msa0454580:CDS
AGGGAGAACAAGAATAGGAA+GGG 0.551693 3_3:-45978909 Msa0454580:CDS
TGACCTACACAATCTTGCTC+AGG 0.556654 3_3:-45975751 Msa0454580:CDS
TATGAAGAAGTTCATGGTCA+TGG 0.557304 3_3:-45975265 Msa0454580:CDS
TCATCAAGCAATCAACATGA+TGG 0.558304 3_3:-45979959 Msa0454580:CDS
GTTAAATCACTTGATATGAC+TGG 0.559368 3_3:-45979208 Msa0454580:CDS
CATAGAAACAGGTCCGCGGA+AGG 0.560192 3_3:-45975084 Msa0454580:CDS
ACTGTGGCGAGTAAGGTATA+GGG 0.561203 3_3:-45974956 Msa0454580:CDS
CATTCAGCAACTTATAATCC+CGG 0.561221 3_3:-45976057 Msa0454580:CDS
AAAGTTGAACCATCCTTTGG+TGG 0.562478 3_3:-45975657 Msa0454580:CDS
TTGATTTCTTAAGGGAAAGG+AGG 0.563375 3_3:-45975014 Msa0454580:CDS
CTTTGCGATGAAGCTCAAGT+AGG 0.565243 3_3:+45975526 None:intergenic
GATCTTATGTTCCCAGGTAG+CGG 0.566131 3_3:-45977833 Msa0454580:CDS
AGAACAAGAATAGGAAGGGA+TGG 0.567452 3_3:-45978905 Msa0454580:CDS
TGCTTGTTTCAGTTGCTGCA+GGG 0.568022 3_3:+45975929 None:intergenic
GTCCGGTCTTGGATTCTGGT+AGG 0.568535 3_3:-45975857 Msa0454580:CDS
TTTGCAATGCCACCAAAGGA+TGG 0.568881 3_3:+45975648 None:intergenic
TGGTTCTGTGGTGAAGTACT+TGG 0.570534 3_3:-45977182 Msa0454580:CDS
ATATACATCAGAGTTGAGCT+TGG 0.570915 3_3:-45976149 Msa0454580:CDS
ACTCCAAACATGAACTTCCA+TGG 0.572043 3_3:+45979360 None:intergenic
AGTCATACGTTTCTAACACC+AGG 0.573223 3_3:-45976831 Msa0454580:CDS
CTCATCTTGCAGCTGGAATG+GGG 0.574100 3_3:-45975218 Msa0454580:CDS
ACAACAAGCCAGCTATGAAG+TGG 0.574316 3_3:-45977376 Msa0454580:CDS
ACATAAAAGCAGCACAGCAA+TGG 0.574810 3_3:-45975041 Msa0454580:CDS
GCGATTCAAAGTGTTTGCCA+TGG 0.574828 3_3:-45976035 Msa0454580:CDS
GCATGTTGTTGAAGATCAGA+TGG 0.575589 3_3:-45975340 Msa0454580:CDS
TATGGTGAATCATAGTTTGG+AGG 0.576492 3_3:-45979539 Msa0454580:CDS
TGATATTGAATGACAAAGTG+TGG 0.577837 3_3:+45978030 None:intergenic
TAAAAGCAGAAAACTACTCA+AGG 0.578182 3_3:-45975437 Msa0454580:CDS
TTTCTGGCATGACTGCTCTC+CGG 0.578842 3_3:-45975395 Msa0454580:CDS
GATTACTCAGAAGAGTTCCA+AGG 0.579043 3_3:+45979719 None:intergenic
TACATCAGAGTTGAGCTTGG+AGG 0.579654 3_3:-45976146 Msa0454580:CDS
CCACCTGAAAATAACACTGA+AGG 0.580669 3_3:-45975717 Msa0454580:CDS
CAACAATCTTCGGAAAACAA+TGG 0.581284 3_3:-45977131 Msa0454580:CDS
CAATGGATTCATTAGTAGGA+AGG 0.583501 3_3:-45977114 Msa0454580:CDS
AACGATGAAAATCTACTCAA+AGG 0.585295 3_3:+45978977 None:intergenic
AAATGGTGAAAGAAGTTCCA+AGG 0.588115 3_3:-45979329 Msa0454580:CDS
GTAGGCCTATTCTCCAAGAA+GGG 0.591836 3_3:-45975839 Msa0454580:CDS
GTCAGATTGCATGGATCTGT+AGG 0.593739 3_3:-45974927 Msa0454580:CDS
TCGAATCATCACATTCAAGA+TGG 0.597262 3_3:+45976853 None:intergenic
GGCCTACCAGAATCCAAGAC+CGG 0.597737 3_3:+45975855 None:intergenic
AAGGTAGAGGAAGGCCTCAG+AGG 0.598482 3_3:-45976914 Msa0454580:CDS
GAAGATTCAATAGGTTCAAG+AGG 0.598512 3_3:-45979502 Msa0454580:CDS
TCACCAGACTGTCTTTATGC+CGG 0.598584 3_3:-45976879 Msa0454580:CDS
GAGCTTATCTGCCACCTCTG+AGG 0.599765 3_3:+45976900 None:intergenic
AAGCACTGCAGAGATTGAAG+AGG 0.601491 3_3:-45977747 Msa0454580:CDS
AGCAGTCATGCCAGAAACCA+TGG 0.602472 3_3:+45975401 None:intergenic
GGCTAAGATATTATGAACAC+AGG 0.603626 3_3:-45975551 Msa0454580:CDS
TCCTAAAGTTGAATGTCAGA+AGG 0.606115 3_3:-45977154 Msa0454580:CDS
TTTCTGTCAAGGTGATCCCA+TGG 0.606176 3_3:+45976018 None:intergenic
CACCTGAAAATAACACTGAA+GGG 0.606197 3_3:-45975716 Msa0454580:CDS
GCAAGATCATCAGCATCAGT+TGG 0.607498 3_3:-45977515 Msa0454580:CDS
TACCTGGGAACATAAGATCA+TGG 0.608114 3_3:+45977837 None:intergenic
TCAATGCACAAGTTGAGGAA+AGG 0.608590 3_3:-45975485 Msa0454580:CDS
TGGGAACATAAGATCATGGA+GGG 0.611832 3_3:+45977841 None:intergenic
AGGTCCGCGGAAGGTTCAAG+AGG 0.611944 3_3:-45975075 Msa0454580:CDS
AGGTACAAACTCAACAACCT+TGG 0.612952 3_3:+45979312 None:intergenic
AAAAGCAGCACAGCAATGGA+TGG 0.613462 3_3:-45975037 Msa0454580:CDS
GCTACTTGTCTTCATCACAT+TGG 0.614311 3_3:-45977254 Msa0454580:CDS
AGAACCTAAAAGACCTACAA+TGG 0.614915 3_3:-45979984 Msa0454580:CDS
ACATTATAATAAAGAAGCGG+TGG 0.617616 3_3:-45977297 Msa0454580:CDS
AAGGAAGTGGCTCATTTGGG+TGG 0.621207 3_3:-45975174 Msa0454580:CDS
ACTCGCATAACATGTGAAGC+CGG 0.621346 3_3:+45975376 None:intergenic
TGTATGATTATCAGCACACA+TGG 0.621872 3_3:-45975881 Msa0454580:CDS
CTCTGCAATATCTTTCCCTG+TGG 0.623302 3_3:+45974987 None:intergenic
TTAGATTGTGAGTGGTTCTG+TGG 0.623452 3_3:-45977194 Msa0454580:CDS
CGAGTAAGGTATAGGGACAA+TGG 0.627040 3_3:-45974949 Msa0454580:CDS
GTCAGCACTACAGCTACACT+TGG 0.629205 3_3:+45977659 None:intergenic
GTAGAGGAAGGCCTCAGAGG+TGG 0.629846 3_3:-45976911 Msa0454580:CDS
ACAAAACTTCTCTGCTTCAG+CGG 0.629862 3_3:-45978008 Msa0454580:CDS
TTTGAAATGTGTTACTTTGG+GGG 0.630099 3_3:-45978933 Msa0454580:CDS
TAACGAATGAGACGGTGACA+CGG 0.632074 3_3:-45978856 Msa0454580:CDS
CAAGCCAGCTATGAAGTGGA+AGG 0.634796 3_3:-45977372 Msa0454580:CDS
AAAGTCCAATTCCTGGTATG+GGG 0.641375 3_3:-45977061 Msa0454580:CDS
TTCTTGAAGAAGGTAGAGGA+AGG 0.641803 3_3:-45976923 Msa0454580:CDS
AATGCTCGACACCGATTCCG+CGG 0.647732 3_3:+45979008 None:intergenic
GACTTGAAGCAAGAAATCCA+AGG 0.649497 3_3:-45975573 Msa0454580:CDS
CAACTCTTAGGCTCAGTGAG+TGG 0.649892 3_3:+45978545 None:intergenic
ACTTGAAGCAAGAAATCCAA+GGG 0.650453 3_3:-45975572 Msa0454580:CDS
GTAGCAGGAAATTGGTTCCG+CGG 0.650851 3_3:-45979025 Msa0454580:CDS
TTTGGCTAGGAATAGAACCA+TGG 0.652685 3_3:-45979377 Msa0454580:CDS
GCTCCTGAGCAAGATTGTGT+AGG 0.654318 3_3:+45975748 None:intergenic
GGGAAAGGAGGTGTTCCACA+GGG 0.660507 3_3:-45975002 Msa0454580:CDS
AAGGACAATAGTGAATCCAG+TGG 0.668983 3_3:-45977963 Msa0454580:CDS
TTGCAAAGTTGATAAACTCG+TGG 0.672470 3_3:+45977440 None:intergenic
AATGATACCAGATTTGAGCA+AGG 0.674900 3_3:-45975193 Msa0454580:CDS
GAGACATTATAATAAAGAAG+CGG 0.676650 3_3:-45977300 Msa0454580:CDS
AATGATGCAAGTTGATAACA+TGG 0.682849 3_3:-45975310 Msa0454580:CDS
CTGGGAACATAAGATCATGG+AGG 0.683507 3_3:+45977840 None:intergenic
TTGCAGAGAAGTTTGGACTG+TGG 0.684126 3_3:-45974972 Msa0454580:CDS
ATGGAAGTTCATGTTTGGAG+TGG 0.684397 3_3:-45979358 Msa0454580:CDS
TTGAGTTCTTCTGTACCTAG+GGG 0.684619 3_3:+45975959 None:intergenic
AGGTTGTTGAGTTTGTACCT+GGG 0.685999 3_3:-45979309 Msa0454580:CDS
CACATGTTATGCGAGTTCCG+AGG 0.686509 3_3:-45975369 Msa0454580:CDS
TGAGTTCTTCTGTACCTAGG+GGG 0.688886 3_3:+45975960 None:intergenic
CATGTTGTTGAAGATCAGAT+GGG 0.691804 3_3:-45975339 Msa0454580:CDS
GTTTCTAGTAACGAATGAGA+CGG 0.697498 3_3:-45978864 Msa0454580:CDS
CGGTCATAGAAACAGGTCCG+CGG 0.717099 3_3:-45975088 Msa0454580:CDS
AAGGAGACTGATCACCACCA+TGG 0.719229 3_3:-45975418 Msa0454580:CDS
AAGGCTCTGATGAATCAACA+CGG 0.752541 3_3:-45976221 Msa0454580:CDS
AGTCATGCCAGAAACCATGG+TGG 0.783670 3_3:+45975404 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTATTTTATTTACATTTTA+AGG + chr3_3:45976446-45976465 None:intergenic 10.0%
!! TTAAAAGTTAAAACAATTTA+TGG + chr3_3:45976611-45976630 None:intergenic 10.0%
!!! ATTTTATTTACATTTTAAGG+TGG + chr3_3:45976443-45976462 None:intergenic 15.0%
!! TATAAAATAAGAACATCATT+AGG - chr3_3:45978465-45978484 Msa0454580:intron 15.0%
!! TTTGGAAATGTTTATGTTTA+TGG + chr3_3:45975018-45975037 None:intergenic 20.0%
!!! TGAAAAATTAACCTCTTTTA+GGG + chr3_3:45975753-45975772 None:intergenic 20.0%
!!! TTGAAAAATTAACCTCTTTT+AGG + chr3_3:45975754-45975773 None:intergenic 20.0%
!!! AAGATTTTAACAAAATCATC+TGG + chr3_3:45976076-45976095 None:intergenic 20.0%
!!! ATGATTTTGTTAAAATCTTC+AGG - chr3_3:45976077-45976096 Msa0454580:CDS 20.0%
!! AATGAAGATAAAAACATTCA+AGG - chr3_3:45976958-45976977 Msa0454580:CDS 20.0%
!!! TTTTAATTTTAGATTGTGAG+TGG - chr3_3:45977674-45977693 Msa0454580:CDS 20.0%
!! ACTAACATTTAATGAACTTT+GGG + chr3_3:45978388-45978407 None:intergenic 20.0%
!! AACTAACATTTAATGAACTT+TGG + chr3_3:45978389-45978408 None:intergenic 20.0%
!!! TAAAGTTTCTGTCAAATTTT+TGG + chr3_3:45978794-45978813 None:intergenic 20.0%
!! TTTACAAAATAGAACATGTT+CGG + chr3_3:45979423-45979442 None:intergenic 20.0%
!!! AAAATGTTGCTGATTTTGTT+TGG + chr3_3:45975036-45975055 None:intergenic 25.0%
! AAATTCAACCTTGAAAAACT+TGG - chr3_3:45975094-45975113 Msa0454580:CDS 25.0%
!!! AAGTTGTTTTTAGAAGAAAC+AGG - chr3_3:45975192-45975211 Msa0454580:CDS 25.0%
!! ATGTTTTCAGAATCATGTAT+TGG - chr3_3:45975281-45975300 Msa0454580:CDS 25.0%
!! ATTTACAAGCTTAACTTTTC+AGG - chr3_3:45975605-45975624 Msa0454580:CDS 25.0%
!!! TAGTTTGAAATGTGTTACTT+TGG - chr3_3:45975940-45975959 Msa0454580:CDS 25.0%
!!! AGTTTGAAATGTGTTACTTT+GGG - chr3_3:45975941-45975960 Msa0454580:CDS 25.0%
! TTGAAATGTTTGTCTTTACA+AGG - chr3_3:45976121-45976140 Msa0454580:CDS 25.0%
! TAGTTTAAACTCATATTTCC+AGG - chr3_3:45976818-45976837 Msa0454580:CDS 25.0%
! AGGATACAAAGATTTCAATA+TGG - chr3_3:45976984-45977003 Msa0454580:CDS 25.0%
! TCGTTATATTGAGTTTATTC+AGG - chr3_3:45977083-45977102 Msa0454580:CDS 25.0%
!! TAATACAGATTTTATCAGAG+TGG - chr3_3:45977464-45977483 Msa0454580:CDS 25.0%
! CTTTATTATAATGTCTCGAT+CGG + chr3_3:45977573-45977592 None:intergenic 25.0%
! GAGACATTATAATAAAGAAG+CGG - chr3_3:45977576-45977595 Msa0454580:CDS 25.0%
!!! AGTGATTTATTTTGATGAGT+TGG - chr3_3:45977648-45977667 Msa0454580:CDS 25.0%
!! AAAACAATGGATTCATTAGT+AGG - chr3_3:45977758-45977777 Msa0454580:CDS 25.0%
! TAGAAGATCACGAAAAATAA+TGG - chr3_3:45978219-45978238 Msa0454580:intron 25.0%
! TTAGTACAAAGTCTTTATAG+AGG + chr3_3:45978281-45978300 None:intergenic 25.0%
! TTGTACTAAATAGCATATCA+TGG - chr3_3:45978292-45978311 Msa0454580:intron 25.0%
! TGTAAAAATACAGTAGCATA+TGG + chr3_3:45978513-45978532 None:intergenic 25.0%
!!! ATGTAGCTTTAAAGACTTAT+GGG + chr3_3:45978559-45978578 None:intergenic 25.0%
!!! AATGTAGCTTTAAAGACTTA+TGG + chr3_3:45978560-45978579 None:intergenic 25.0%
!!! TCTTTAAAGCTACATTTTCT+AGG - chr3_3:45978564-45978583 Msa0454580:CDS 25.0%
!! GTAACTTTTGCTCTTAAAAT+CGG - chr3_3:45979633-45979652 Msa0454580:CDS 25.0%
! TTATGGAGTTGTTTGTTTCT+TGG + chr3_3:45975001-45975020 None:intergenic 30.0%
ATGATGCTAATGTTGCTAAA+AGG + chr3_3:45975064-45975083 None:intergenic 30.0%
!! TTTTCAAGGTTGAATTTGTG+TGG + chr3_3:45975091-45975110 None:intergenic 30.0%
TTTAGAAGAAACAGGTTCAA+TGG - chr3_3:45975200-45975219 Msa0454580:CDS 30.0%
! AGATCTTTCTGACATTTTGA+AGG - chr3_3:45975235-45975254 Msa0454580:CDS 30.0%
TTTACTTGCTTCTTCACTTA+TGG - chr3_3:45975319-45975338 Msa0454580:CDS 30.0%
ACTTATGGTGAATCATAGTT+TGG - chr3_3:45975334-45975353 Msa0454580:CDS 30.0%
ATTGTTAACAGCTTAAGAGA+TGG + chr3_3:45975434-45975453 None:intergenic 30.0%
ATTCTTAATGTATTGTTCCC+AGG + chr3_3:45975587-45975606 None:intergenic 30.0%
!!! TTAACTTTTCAGGTACTTGT+AGG - chr3_3:45975615-45975634 Msa0454580:CDS 30.0%
!!! TAACTTTTCAGGTACTTGTA+GGG - chr3_3:45975616-45975635 Msa0454580:CDS 30.0%
AACTGTGAAATTCATTCCTA+AGG + chr3_3:45975651-45975670 None:intergenic 30.0%
GTTAAATCACTTGATATGAC+TGG - chr3_3:45975668-45975687 Msa0454580:CDS 30.0%
GATAAAATCAAAGTGTGCTA+AGG - chr3_3:45975697-45975716 Msa0454580:CDS 30.0%
!!! AATTAACCTCTTTTAGGGTT+TGG + chr3_3:45975748-45975767 None:intergenic 30.0%
AAGAACATGTCTGAAAGATA+AGG - chr3_3:45975772-45975791 Msa0454580:CDS 30.0%
AGAACATGTCTGAAAGATAA+GGG - chr3_3:45975773-45975792 Msa0454580:CDS 30.0%
AATTACATGTAGCAGGAAAT+TGG - chr3_3:45975843-45975862 Msa0454580:CDS 30.0%
AACGATGAAAATCTACTCAA+AGG + chr3_3:45975902-45975921 None:intergenic 30.0%
!! GTTTGAAATGTGTTACTTTG+GGG - chr3_3:45975942-45975961 Msa0454580:CDS 30.0%
!! TTTGAAATGTGTTACTTTGG+GGG - chr3_3:45975943-45975962 Msa0454580:CDS 30.0%
TTGTCTTTACAAGGTTGTAA+AGG - chr3_3:45976130-45976149 Msa0454580:CDS 30.0%
AGATCAATTTCTTCAATCCA+AGG + chr3_3:45976208-45976227 None:intergenic 30.0%
AGAACACCTTTACATAATTC+TGG - chr3_3:45976232-45976251 Msa0454580:CDS 30.0%
! ATAATTCTGGAGAGTCTATT+GGG - chr3_3:45976245-45976264 Msa0454580:CDS 30.0%
ATTGGGATTTATCAGAGATT+AGG - chr3_3:45976262-45976281 Msa0454580:intron 30.0%
TTGGGATTTATCAGAGATTA+GGG - chr3_3:45976263-45976282 Msa0454580:intron 30.0%
TCTTTGATCAAATCCATTTC+TGG + chr3_3:45976307-45976326 None:intergenic 30.0%
CAGAACTTTCATATAAACAC+AGG - chr3_3:45976485-45976504 Msa0454580:intron 30.0%
TAAACACAGGCTAATAGTAA+AGG - chr3_3:45976498-45976517 Msa0454580:intron 30.0%
!! CTTATTTTCATAAGCTCTAC+AGG - chr3_3:45976632-45976651 Msa0454580:intron 30.0%
TGATATTGAATGACAAAGTG+TGG + chr3_3:45976849-45976868 None:intergenic 30.0%
GATAAAAACATTCAAGGATG+AGG - chr3_3:45976964-45976983 Msa0454580:CDS 30.0%
ATTTCAATATGGAATCTTGC+TGG - chr3_3:45976995-45977014 Msa0454580:CDS 30.0%
TTGAAGAGGATTTGCAATAT+TGG - chr3_3:45977143-45977162 Msa0454580:CDS 30.0%
ACATTATAATAAAGAAGCGG+TGG - chr3_3:45977579-45977598 Msa0454580:CDS 30.0%
GAACTTGAGAAAATCTTAAG+AGG - chr3_3:45977784-45977803 Msa0454580:CDS 30.0%
!! AGTAGAGAATTTTGATCTGA+CGG + chr3_3:45977919-45977938 None:intergenic 30.0%
TTGCAAGAAACAATTGCAAA+GGG + chr3_3:45978135-45978154 None:intergenic 30.0%
TGATTGAAATACTAAGTGCA+GGG + chr3_3:45978189-45978208 None:intergenic 30.0%
TTGATTGAAATACTAAGTGC+AGG + chr3_3:45978190-45978209 None:intergenic 30.0%
AAACGAGAAAATTGTAGTCA+AGG + chr3_3:45978604-45978623 None:intergenic 30.0%
ACACCTTCACAACAAAATAA+AGG - chr3_3:45978636-45978655 Msa0454580:CDS 30.0%
! CATTAATGCTGATTGAAATG+AGG + chr3_3:45978705-45978724 None:intergenic 30.0%
CTCATTTCAATCAGCATTAA+TGG - chr3_3:45978703-45978722 Msa0454580:CDS 30.0%
!! AGTTTCTGTCAAATTTTTGG+TGG + chr3_3:45978791-45978810 None:intergenic 30.0%
! TCTAATGACATTTTCTGTCA+AGG + chr3_3:45978872-45978891 None:intergenic 30.0%
TAAAAGCAGAAAACTACTCA+AGG - chr3_3:45979439-45979458 Msa0454580:CDS 30.0%
!! AATGATGCAAGTTGATAACA+TGG - chr3_3:45979566-45979585 Msa0454580:CDS 30.0%
TCCATATATGAAGAAGTTCA+TGG - chr3_3:45979605-45979624 Msa0454580:CDS 30.0%
ACCATGAACTTCTTCATATA+TGG + chr3_3:45979609-45979628 None:intergenic 30.0%
! AATGGATGGTTGATTTCTTA+AGG - chr3_3:45979853-45979872 Msa0454580:CDS 30.0%
! ATGGATGGTTGATTTCTTAA+GGG - chr3_3:45979854-45979873 Msa0454580:CDS 30.0%
AAAGATATTGCAGAGAAGTT+TGG - chr3_3:45979897-45979916 Msa0454580:CDS 30.0%
!!! ATTGTAGGTCTTTTAGGTTC+TGG + chr3_3:45974893-45974912 None:intergenic 35.0%
AGAACCTAAAAGACCTACAA+TGG - chr3_3:45974892-45974911 Msa0454580:CDS 35.0%
TCATCAAGCAATCAACATGA+TGG - chr3_3:45974917-45974936 Msa0454580:CDS 35.0%
! AGGAAATGCTGTGTAGATTT+TGG + chr3_3:45974947-45974966 None:intergenic 35.0%
! GTAACAAGTTGAAGTTGGTT+GGG + chr3_3:45974979-45974998 None:intergenic 35.0%
! TCTTGGTAACAAGTTGAAGT+TGG + chr3_3:45974984-45975003 None:intergenic 35.0%
TGCTAATGTTGCTAAAAGGT+TGG + chr3_3:45975060-45975079 None:intergenic 35.0%
! GTGAAACTCCAAGTTTTTCA+AGG + chr3_3:45975105-45975124 None:intergenic 35.0%
TGGAGTTTCACAAAGTTGAA+TGG - chr3_3:45975114-45975133 Msa0454580:CDS 35.0%
GGAGTTTCACAAAGTTGAAT+GGG - chr3_3:45975115-45975134 Msa0454580:CDS 35.0%
TCACAACAGGTAAAAAACCT+TGG - chr3_3:45975140-45975159 Msa0454580:CDS 35.0%
!! GAATCATGTATTGGTTCTGT+TGG - chr3_3:45975290-45975309 Msa0454580:CDS 35.0%
TATGGTGAATCATAGTTTGG+AGG - chr3_3:45975337-45975356 Msa0454580:CDS 35.0%
CAGATTTGGGAAGATTCAAT+AGG - chr3_3:45975365-45975384 Msa0454580:CDS 35.0%
GAAGATTCAATAGGTTCAAG+AGG - chr3_3:45975374-45975393 Msa0454580:CDS 35.0%
! ACCTCTTATATCTGCAGTTT+TGG - chr3_3:45975481-45975500 Msa0454580:CDS 35.0%
!!! TTATATCTGCAGTTTTGGCT+AGG - chr3_3:45975486-45975505 Msa0454580:CDS 35.0%
AAATGGTGAAAGAAGTTCCA+AGG - chr3_3:45975547-45975566 Msa0454580:CDS 35.0%
AGTGTGCTAAGGAATTTAGA+TGG - chr3_3:45975708-45975727 Msa0454580:CDS 35.0%
GTGTGCTAAGGAATTTAGAT+GGG - chr3_3:45975709-45975728 Msa0454580:CDS 35.0%
ACAAAACCAAACCCTAAAAG+AGG - chr3_3:45975739-45975758 Msa0454580:CDS 35.0%
CTGCAAAAATTACATGTAGC+AGG - chr3_3:45975836-45975855 Msa0454580:CDS 35.0%
!! TTGAAATGTGTTACTTTGGG+GGG - chr3_3:45975944-45975963 Msa0454580:CDS 35.0%
!! GTTTCTAGTAACGAATGAGA+CGG - chr3_3:45976012-45976031 Msa0454580:CDS 35.0%
! TACATGATGATGAGAGTTTG+AGG - chr3_3:45976050-45976069 Msa0454580:CDS 35.0%
! GATTTTGCTGCAGACAATTA+TGG - chr3_3:45976165-45976184 Msa0454580:CDS 35.0%
AGACACTTCAGATAAATCCT+TGG - chr3_3:45976188-45976207 Msa0454580:CDS 35.0%
GACTCTCCAGAATTATGTAA+AGG + chr3_3:45976241-45976260 None:intergenic 35.0%
! CATAATTCTGGAGAGTCTAT+TGG - chr3_3:45976244-45976263 Msa0454580:CDS 35.0%
TGAAAATCCTGAACCAGAAA+TGG - chr3_3:45976291-45976310 Msa0454580:intron 35.0%
!! ATCAAATCCATTTCTGGTTC+AGG + chr3_3:45976301-45976320 None:intergenic 35.0%
AAGAAAACTCTGCAACTCTT+AGG + chr3_3:45976346-45976365 None:intergenic 35.0%
! AGTTGCAGAGTTTTCTTTTG+TGG - chr3_3:45976349-45976368 Msa0454580:intron 35.0%
! TTTTGTGGACAAGAATATGC+AGG - chr3_3:45976364-45976383 Msa0454580:intron 35.0%
GCTAATAGTAAAGGTCTGTT+TGG - chr3_3:45976507-45976526 Msa0454580:intron 35.0%
!!! CTTTTTGGTTCTCTGTTACT+TGG + chr3_3:45977112-45977131 None:intergenic 35.0%
!! AGGATTTGCAATATTGGCTT+AGG - chr3_3:45977149-45977168 Msa0454580:CDS 35.0%
ATCACAAAATCTGCAGCAAA+CGG - chr3_3:45977264-45977283 Msa0454580:CDS 35.0%
AGATTGAGAGACAAGTTTCA+AGG - chr3_3:45977301-45977320 Msa0454580:CDS 35.0%
!! GAATTGTTTTGCACGTCTTT+CGG + chr3_3:45977405-45977424 None:intergenic 35.0%
!! TTGCAAAGTTGATAAACTCG+TGG + chr3_3:45977439-45977458 None:intergenic 35.0%
TCGATCGGATTCTCAAATAT+GGG + chr3_3:45977558-45977577 None:intergenic 35.0%
TCCTAAAGTTGAATGTCAGA+AGG - chr3_3:45977722-45977741 Msa0454580:CDS 35.0%
CAACAATCTTCGGAAAACAA+TGG - chr3_3:45977745-45977764 Msa0454580:CDS 35.0%
! CAATGGATTCATTAGTAGGA+AGG - chr3_3:45977762-45977781 Msa0454580:CDS 35.0%
AGTTTACAAAGTCCAATTCC+TGG - chr3_3:45977808-45977827 Msa0454580:CDS 35.0%
!! GTTTTAGCATCATTCTCACA+AGG + chr3_3:45977873-45977892 None:intergenic 35.0%
TGTGAGAATGATGCTAAAAC+TGG - chr3_3:45977873-45977892 Msa0454580:CDS 35.0%
ATTCCTTCCATTCTTGAAGA+AGG - chr3_3:45977943-45977962 Msa0454580:CDS 35.0%
TCGAATCATCACATTCAAGA+TGG + chr3_3:45978026-45978045 None:intergenic 35.0%
TGAAACTGAGGGAATAAAAG+AGG + chr3_3:45978112-45978131 None:intergenic 35.0%
GTTGCAAGAAACAATTGCAA+AGG + chr3_3:45978136-45978155 None:intergenic 35.0%
GTTCAAATTGTGTTGTGCTA+TGG - chr3_3:45978329-45978348 Msa0454580:intron 35.0%
TCAGAAACCTAACTCAAATG+AGG - chr3_3:45978423-45978442 Msa0454580:intron 35.0%
! CTTTGAACCTCATTTGAGTT+AGG + chr3_3:45978433-45978452 None:intergenic 35.0%
!! ATATGGCTTGTGTATTTTGC+AGG + chr3_3:45978496-45978515 None:intergenic 35.0%
GGTGAAGATCAAAATCGAAA+CGG + chr3_3:45978538-45978557 None:intergenic 35.0%
!!! GAGCCTTTATTTTGTTGTGA+AGG + chr3_3:45978642-45978661 None:intergenic 35.0%
ATATACATCAGAGTTGAGCT+TGG - chr3_3:45978727-45978746 Msa0454580:CDS 35.0%
CATTCAGCAACTTATAATCC+CGG - chr3_3:45978819-45978838 Msa0454580:CDS 35.0%
ATTGAGTTCTTCTGTACCTA+GGG + chr3_3:45978921-45978940 None:intergenic 35.0%
AATTGAGTTCTTCTGTACCT+AGG + chr3_3:45978922-45978941 None:intergenic 35.0%
TGTATGATTATCAGCACACA+TGG - chr3_3:45978995-45979014 Msa0454580:CDS 35.0%
!!! CTTCAGTGTTATTTTCAGGT+GGG + chr3_3:45979161-45979180 None:intergenic 35.0%
CACCTGAAAATAACACTGAA+GGG - chr3_3:45979160-45979179 Msa0454580:CDS 35.0%
TTTCTCAGCTTCATTGCTTA+AGG + chr3_3:45979202-45979221 None:intergenic 35.0%
ACTTGAAGCAAGAAATCCAA+GGG - chr3_3:45979304-45979323 Msa0454580:CDS 35.0%
GTTCATAATATCTTAGCCCT+TGG + chr3_3:45979323-45979342 None:intergenic 35.0%
GGCTAAGATATTATGAACAC+AGG - chr3_3:45979325-45979344 Msa0454580:CDS 35.0%
CATGTTGTTGAAGATCAGAT+GGG - chr3_3:45979537-45979556 Msa0454580:CDS 35.0%
TATGAAGAAGTTCATGGTCA+TGG - chr3_3:45979611-45979630 Msa0454580:CDS 35.0%
AATGATACCAGATTTGAGCA+AGG - chr3_3:45979683-45979702 Msa0454580:CDS 35.0%
! TGGTTGATTTCTTAAGGGAA+AGG - chr3_3:45979859-45979878 Msa0454580:CDS 35.0%
TTGATTTCTTAAGGGAAAGG+AGG - chr3_3:45979862-45979881 Msa0454580:CDS 35.0%
TTCAATTATCTCTGCAGATC+TGG + chr3_3:45979988-45980007 None:intergenic 35.0%
! GAGACCATTGTAGGTCTTTT+AGG + chr3_3:45974899-45974918 None:intergenic 40.0%
TTGCTTGATGAGACCATTGT+AGG + chr3_3:45974908-45974927 None:intergenic 40.0%
! AAGTTGAAGTTGGTTGGGAA+AGG + chr3_3:45974974-45974993 None:intergenic 40.0%
! GGTAACAAGTTGAAGTTGGT+TGG + chr3_3:45974980-45974999 None:intergenic 40.0%
AGTTGAATGGGAATCACAAC+AGG - chr3_3:45975127-45975146 Msa0454580:CDS 40.0%
GATTACTCAGAAGAGTTCCA+AGG + chr3_3:45975160-45975179 None:intergenic 40.0%
TTTGGAGGAGTTGCAGATTT+GGG - chr3_3:45975352-45975371 Msa0454580:CDS 40.0%
GCCAAAACTGCAGATATAAG+AGG + chr3_3:45975485-45975504 None:intergenic 40.0%
TTTGGCTAGGAATAGAACCA+TGG - chr3_3:45975499-45975518 Msa0454580:CDS 40.0%
GAACCATGGAAGTTCATGTT+TGG - chr3_3:45975513-45975532 Msa0454580:CDS 40.0%
ACTCCAAACATGAACTTCCA+TGG + chr3_3:45975519-45975538 None:intergenic 40.0%
ATGGAAGTTCATGTTTGGAG+TGG - chr3_3:45975518-45975537 Msa0454580:CDS 40.0%
! GTTTGGAGTGGTGATCAAAA+TGG - chr3_3:45975530-45975549 Msa0454580:CDS 40.0%
AGGTACAAACTCAACAACCT+TGG + chr3_3:45975567-45975586 None:intergenic 40.0%
AAGGTTGTTGAGTTTGTACC+TGG - chr3_3:45975566-45975585 Msa0454580:CDS 40.0%
AGGTTGTTGAGTTTGTACCT+GGG - chr3_3:45975567-45975586 Msa0454580:CDS 40.0%
AGGGAGAACAAGAATAGGAA+GGG - chr3_3:45975967-45975986 Msa0454580:CDS 40.0%
AGAACAAGAATAGGAAGGGA+TGG - chr3_3:45975971-45975990 Msa0454580:CDS 40.0%
AATAGGAAGGGATGGTTTAG+TGG - chr3_3:45975979-45975998 Msa0454580:CDS 40.0%
!! CAAGGTTGTAAAGGTGTTCA+AGG - chr3_3:45976139-45976158 Msa0454580:CDS 40.0%
TGGACAAGAATATGCAGGTA+AGG - chr3_3:45976369-45976388 Msa0454580:intron 40.0%
! TGACAAAGTGTGGTTTTTCC+TGG + chr3_3:45976839-45976858 None:intergenic 40.0%
ACAAAACTTCTCTGCTTCAG+CGG - chr3_3:45976868-45976887 Msa0454580:CDS 40.0%
TACCCTACTTGGATCAAGTA+AGG - chr3_3:45976894-45976913 Msa0454580:CDS 40.0%
GTCCTTACTTGATCCAAGTA+GGG + chr3_3:45976899-45976918 None:intergenic 40.0%
TGTCCTTACTTGATCCAAGT+AGG + chr3_3:45976900-45976919 None:intergenic 40.0%
AAGGACAATAGTGAATCCAG+TGG - chr3_3:45976913-45976932 Msa0454580:CDS 40.0%
TGGGAACATAAGATCATGGA+GGG + chr3_3:45977038-45977057 None:intergenic 40.0%
TACCTGGGAACATAAGATCA+TGG + chr3_3:45977042-45977061 None:intergenic 40.0%
! TCAATCTCTGCAGTGCTTTT+TGG + chr3_3:45977127-45977146 None:intergenic 40.0%
GTTTCCAATTCCAAAAGAGC+AGG - chr3_3:45977178-45977197 Msa0454580:CDS 40.0%
!!! TTGTCCTGCTCTTTTGGAAT+TGG + chr3_3:45977185-45977204 None:intergenic 40.0%
! GCTGCAGATTTTGTGATGAT+TGG + chr3_3:45977261-45977280 None:intergenic 40.0%
CGTCAACTGTGAATACAGTT+TGG + chr3_3:45977342-45977361 None:intergenic 40.0%
GATAAACTCGTGGTACTCTT+TGG + chr3_3:45977429-45977448 None:intergenic 40.0%
CTCGATCGGATTCTCAAATA+TGG + chr3_3:45977559-45977578 None:intergenic 40.0%
GCTACTTGTCTTCATCACAT+TGG - chr3_3:45977622-45977641 Msa0454580:CDS 40.0%
! TTAGATTGTGAGTGGTTCTG+TGG - chr3_3:45977682-45977701 Msa0454580:CDS 40.0%
GCCTTCTGACATTCAACTTT+AGG + chr3_3:45977726-45977745 None:intergenic 40.0%
TGTCAGAAGGCAACAATCTT+CGG - chr3_3:45977735-45977754 Msa0454580:CDS 40.0%
ACAAAGTCCAATTCCTGGTA+TGG - chr3_3:45977813-45977832 Msa0454580:CDS 40.0%
CAAAGTCCAATTCCTGGTAT+GGG - chr3_3:45977814-45977833 Msa0454580:CDS 40.0%
AAAGTCCAATTCCTGGTATG+GGG - chr3_3:45977815-45977834 Msa0454580:CDS 40.0%
CTACCTTCTTCAAGAATGGA+AGG + chr3_3:45977949-45977968 None:intergenic 40.0%
TCCATTCTTGAAGAAGGTAG+AGG - chr3_3:45977949-45977968 Msa0454580:CDS 40.0%
TCCTCTACCTTCTTCAAGAA+TGG + chr3_3:45977953-45977972 None:intergenic 40.0%
TTCTTGAAGAAGGTAGAGGA+AGG - chr3_3:45977953-45977972 Msa0454580:CDS 40.0%
AGTCATACGTTTCTAACACC+AGG - chr3_3:45978045-45978064 Msa0454580:intron 40.0%
AAAAACTTGCCTGTAAGCGA+GGG + chr3_3:45978077-45978096 None:intergenic 40.0%
! GGAATAAAAGAGGAGCATGA+TGG + chr3_3:45978102-45978121 None:intergenic 40.0%
ATTGCAAAGGGTGAAACTGA+GGG + chr3_3:45978123-45978142 None:intergenic 40.0%
AATTGCAAAGGGTGAAACTG+AGG + chr3_3:45978124-45978143 None:intergenic 40.0%
! AAGGCTCTGATGAATCAACA+CGG - chr3_3:45978655-45978674 Msa0454580:CDS 40.0%
! CGATTCAAAGTGTTTGCCAT+GGG - chr3_3:45978842-45978861 Msa0454580:CDS 40.0%
GTCAAACTTTGCACACATTC+AGG + chr3_3:45978895-45978914 None:intergenic 40.0%
TTGAGTTCTTCTGTACCTAG+GGG + chr3_3:45978920-45978939 None:intergenic 40.0%
TAATCATACATGCTGTCTGC+TGG + chr3_3:45978985-45979004 None:intergenic 40.0%
TCAAACCCTTCTTGGAGAAT+AGG + chr3_3:45979045-45979064 None:intergenic 40.0%
! TTTTGCGCGAGACCTTTTAT+CGG - chr3_3:45979065-45979084 Msa0454580:CDS 40.0%
GGAAGTCATCATCCGATAAA+AGG + chr3_3:45979080-45979099 None:intergenic 40.0%
!!! CCTTCAGTGTTATTTTCAGG+TGG + chr3_3:45979162-45979181 None:intergenic 40.0%
CCACCTGAAAATAACACTGA+AGG - chr3_3:45979159-45979178 Msa0454580:CDS 40.0%
GAGAAAGTTGAACCATCCTT+TGG - chr3_3:45979216-45979235 Msa0454580:CDS 40.0%
AAAGTTGAACCATCCTTTGG+TGG - chr3_3:45979219-45979238 Msa0454580:CDS 40.0%
GACTTGAAGCAAGAAATCCA+AGG - chr3_3:45979303-45979322 Msa0454580:CDS 40.0%
AACCTTCAATGCACAAGTTG+AGG - chr3_3:45979386-45979405 Msa0454580:CDS 40.0%
TTCCTCAACTTGTGCATTGA+AGG + chr3_3:45979391-45979410 None:intergenic 40.0%
! TCAATGCACAAGTTGAGGAA+AGG - chr3_3:45979391-45979410 Msa0454580:CDS 40.0%
CAACAACATGCATTTGTCCT+CGG + chr3_3:45979527-45979546 None:intergenic 40.0%
GCATGTTGTTGAAGATCAGA+TGG - chr3_3:45979536-45979555 Msa0454580:CDS 40.0%
TAACATGGCTGTGAAGTCTT+TGG - chr3_3:45979581-45979600 Msa0454580:CDS 40.0%
ACATAAAAGCAGCACAGCAA+TGG - chr3_3:45979835-45979854 Msa0454580:CDS 40.0%
AGTTGGTTGGGAAAGGTAGA+AGG + chr3_3:45974967-45974986 None:intergenic 45.0%
GTTTGGAGGAGTTGCAGATT+TGG - chr3_3:45975351-45975370 Msa0454580:CDS 45.0%
TGTAGGGTTGCTTGTTCCTT+AGG - chr3_3:45975632-45975651 Msa0454580:CDS 45.0%
GGCATTGTGTATATTGCTGC+TGG - chr3_3:45975794-45975813 Msa0454580:CDS 45.0%
!! AAATGTGTTACTTTGGGGGG+AGG - chr3_3:45975947-45975966 Msa0454580:CDS 45.0%
!! AATGTGTTACTTTGGGGGGA+GGG - chr3_3:45975948-45975967 Msa0454580:CDS 45.0%
GAGGGAGAACAAGAATAGGA+AGG - chr3_3:45975966-45975985 Msa0454580:CDS 45.0%
TAACGAATGAGACGGTGACA+CGG - chr3_3:45976020-45976039 Msa0454580:CDS 45.0%
AATAGTGAATCCAGTGGAGC+AGG - chr3_3:45976919-45976938 Msa0454580:CDS 45.0%
CTGGGAACATAAGATCATGG+AGG + chr3_3:45977039-45977058 None:intergenic 45.0%
CTCCATGATCTTATGTTCCC+AGG - chr3_3:45977037-45977056 Msa0454580:CDS 45.0%
GATCTTATGTTCCCAGGTAG+CGG - chr3_3:45977043-45977062 Msa0454580:CDS 45.0%
! AAGCACTGCAGAGATTGAAG+AGG - chr3_3:45977129-45977148 Msa0454580:CDS 45.0%
! GCATTGTTGTCCTGCTCTTT+TGG + chr3_3:45977191-45977210 None:intergenic 45.0%
GCAAGATCATCAGCATCAGT+TGG - chr3_3:45977361-45977380 Msa0454580:CDS 45.0%
ACAACAAGCCAGCTATGAAG+TGG - chr3_3:45977500-45977519 Msa0454580:CDS 45.0%
AACTCCTTCCACTTCATAGC+TGG + chr3_3:45977511-45977530 None:intergenic 45.0%
GCTATGAAGTGGAAGGAGTT+TGG - chr3_3:45977511-45977530 Msa0454580:CDS 45.0%
! TGGTTCTGTGGTGAAGTACT+TGG - chr3_3:45977694-45977713 Msa0454580:CDS 45.0%
TTTGACCCCATACCAGGAAT+TGG + chr3_3:45977823-45977842 None:intergenic 45.0%
AATTCCTGGTATGGGGTCAA+AGG - chr3_3:45977822-45977841 Msa0454580:CDS 45.0%
AATACCTTTGACCCCATACC+AGG + chr3_3:45977829-45977848 None:intergenic 45.0%
TCACCAGACTGTCTTTATGC+CGG - chr3_3:45977997-45978016 Msa0454580:CDS 45.0%
ATCACATTCAAGATGGCGTC+CGG + chr3_3:45978019-45978038 None:intergenic 45.0%
GAAAAACTTGCCTGTAAGCG+AGG + chr3_3:45978078-45978097 None:intergenic 45.0%
GGGACACTATTGTCAAACAG+CGG + chr3_3:45978368-45978387 None:intergenic 45.0%
! ATTTTCTCGTTTCGTGCTGC+AGG - chr3_3:45978612-45978631 Msa0454580:CDS 45.0%
TACATCAGAGTTGAGCTTGG+AGG - chr3_3:45978730-45978749 Msa0454580:CDS 45.0%
TGGCAAACACTTTGAATCGC+CGG + chr3_3:45978841-45978860 None:intergenic 45.0%
! GCGATTCAAAGTGTTTGCCA+TGG - chr3_3:45978841-45978860 Msa0454580:CDS 45.0%
TTTCTGTCAAGGTGATCCCA+TGG + chr3_3:45978861-45978880 None:intergenic 45.0%
TGAGTTCTTCTGTACCTAGG+GGG + chr3_3:45978919-45978938 None:intergenic 45.0%
TGCTTGTTTCAGTTGCTGCA+GGG + chr3_3:45978950-45978969 None:intergenic 45.0%
TTATCAGCACACATGGAGTC+CGG - chr3_3:45979002-45979021 Msa0454580:CDS 45.0%
GTAGGCCTATTCTCCAAGAA+GGG - chr3_3:45979037-45979056 Msa0454580:CDS 45.0%
GCGCAAAATCAAACCCTTCT+TGG + chr3_3:45979053-45979072 None:intergenic 45.0%
TGACCTACACAATCTTGCTC+AGG - chr3_3:45979125-45979144 Msa0454580:CDS 45.0%
!!! CGCCCTTCAGTGTTATTTTC+AGG + chr3_3:45979165-45979184 None:intergenic 45.0%
TTTGCAATGCCACCAAAGGA+TGG + chr3_3:45979231-45979250 None:intergenic 45.0%
! TCCTTTGGTGGCATTGCAAA+AGG - chr3_3:45979231-45979250 Msa0454580:CDS 45.0%
! CCTTTGGTGGCATTGCAAAA+GGG - chr3_3:45979232-45979251 Msa0454580:CDS 45.0%
! CTTTGGTGGCATTGCAAAAG+GGG - chr3_3:45979233-45979252 Msa0454580:CDS 45.0%
CTTTGCGATGAAGCTCAAGT+AGG + chr3_3:45979353-45979372 None:intergenic 45.0%
ACTCGCATAACATGTGAAGC+CGG + chr3_3:45979503-45979522 None:intergenic 45.0%
ACCAGATTTGAGCAAGGAAG+TGG - chr3_3:45979689-45979708 Msa0454580:CDS 45.0%
AGCAAGGAAGTGGCTCATTT+GGG - chr3_3:45979699-45979718 Msa0454580:CDS 45.0%
CTGCTATCGGTCATAGAAAC+AGG - chr3_3:45979781-45979800 Msa0454580:CDS 45.0%
AAAAGCAGCACAGCAATGGA+TGG - chr3_3:45979839-45979858 Msa0454580:CDS 45.0%
CTCTGCAATATCTTTCCCTG+TGG + chr3_3:45979892-45979911 None:intergenic 45.0%
TTGCAGAGAAGTTTGGACTG+TGG - chr3_3:45979904-45979923 Msa0454580:CDS 45.0%
ACTGTGGCGAGTAAGGTATA+GGG - chr3_3:45979920-45979939 Msa0454580:CDS 45.0%
CGAGTAAGGTATAGGGACAA+TGG - chr3_3:45979927-45979946 Msa0454580:CDS 45.0%
GTCAGATTGCATGGATCTGT+AGG - chr3_3:45979949-45979968 Msa0454580:CDS 45.0%
! GTAGCAGGAAATTGGTTCCG+CGG - chr3_3:45975851-45975870 Msa0454580:CDS 50.0%
! GGAAATTGGTTCCGCGGAAT+CGG - chr3_3:45975857-45975876 Msa0454580:CDS 50.0%
AATGAGACGGTGACACGGTT+CGG - chr3_3:45976025-45976044 Msa0454580:CDS 50.0%
CAACTCTTAGGCTCAGTGAG+TGG + chr3_3:45976334-45976353 None:intergenic 50.0%
GAGCAGGCTGTCAAAACAGT+TGG - chr3_3:45976935-45976954 Msa0454580:CDS 50.0%
GTCAGCACTACAGCTACACT+TGG + chr3_3:45977220-45977239 None:intergenic 50.0%
CAAGCCAGCTATGAAGTGGA+AGG - chr3_3:45977504-45977523 Msa0454580:CDS 50.0%
TGTAAGCGAGGGAAGAATCC+TGG + chr3_3:45978066-45978085 None:intergenic 50.0%
AGGATTCTTCCCTCGCTTAC+AGG - chr3_3:45978065-45978084 Msa0454580:intron 50.0%
GTTGAGCTTGGAGGACAACT+AGG - chr3_3:45978739-45978758 Msa0454580:CDS 50.0%
GGCAAACACTTTGAATCGCC+GGG + chr3_3:45978840-45978859 None:intergenic 50.0%
TGCAAAGTTTGACACCCCCT+AGG - chr3_3:45978902-45978921 Msa0454580:CDS 50.0%
GTGCTTGTTTCAGTTGCTGC+AGG + chr3_3:45978951-45978970 None:intergenic 50.0%
GGTAGGCCTATTCTCCAAGA+AGG - chr3_3:45979036-45979055 Msa0454580:CDS 50.0%
! ACCTGCGATGAAGCACTTCT+CGG + chr3_3:45979101-45979120 None:intergenic 50.0%
GCTCCTGAGCAAGATTGTGT+AGG + chr3_3:45979131-45979150 None:intergenic 50.0%
! CCCTTTTGCAATGCCACCAA+AGG + chr3_3:45979235-45979254 None:intergenic 50.0%
AAGGAGACTGATCACCACCA+TGG - chr3_3:45979458-45979477 Msa0454580:CDS 50.0%
CTGATCACCACCATGGTTTC+TGG - chr3_3:45979465-45979484 Msa0454580:CDS 50.0%
AGTCATGCCAGAAACCATGG+TGG + chr3_3:45979475-45979494 None:intergenic 50.0%
AGCAGTCATGCCAGAAACCA+TGG + chr3_3:45979478-45979497 None:intergenic 50.0%
! TTTCTGGCATGACTGCTCTC+CGG - chr3_3:45979481-45979500 Msa0454580:CDS 50.0%
CACATGTTATGCGAGTTCCG+AGG - chr3_3:45979507-45979526 Msa0454580:CDS 50.0%
AGCTCATCTTGCAGCTGGAA+TGG - chr3_3:45979656-45979675 Msa0454580:CDS 50.0%
GCTCATCTTGCAGCTGGAAT+GGG - chr3_3:45979657-45979676 Msa0454580:CDS 50.0%
CTCATCTTGCAGCTGGAATG+GGG - chr3_3:45979658-45979677 Msa0454580:CDS 50.0%
GCCACTTCCTTGCTCAAATC+TGG + chr3_3:45979693-45979712 None:intergenic 50.0%
GAGCAAGGAAGTGGCTCATT+TGG - chr3_3:45979698-45979717 Msa0454580:CDS 50.0%
AAGGAAGTGGCTCATTTGGG+TGG - chr3_3:45979702-45979721 Msa0454580:CDS 50.0%
!! CAACTGCAGCTGGTGTTGTA+GGG - chr3_3:45979754-45979773 Msa0454580:CDS 50.0%
!! AACTGCAGCTGGTGTTGTAG+GGG - chr3_3:45979755-45979774 Msa0454580:CDS 50.0%
AATGCCTCTTGAACCTTCCG+CGG + chr3_3:45979808-45979827 None:intergenic 50.0%
AGTTTGGACTGTGGCGAGTA+AGG - chr3_3:45979913-45979932 Msa0454580:CDS 50.0%
GACTGTGGCGAGTAAGGTAT+AGG - chr3_3:45979919-45979938 Msa0454580:CDS 50.0%
GGGACAATGGTCAGATTGCA+TGG - chr3_3:45979940-45979959 Msa0454580:CDS 50.0%
!! AATGCTCGACACCGATTCCG+CGG + chr3_3:45975871-45975890 None:intergenic 55.0%
GGGGGAGGGAGAACAAGAAT+AGG - chr3_3:45975962-45975981 Msa0454580:CDS 55.0%
ATGAGACGGTGACACGGTTC+GGG - chr3_3:45976026-45976045 Msa0454580:CDS 55.0%
TTCAGCGGCACTACCCTACT+TGG - chr3_3:45976883-45976902 Msa0454580:CDS 55.0%
!! GTTTTGACAGCCTGCTCCAC+TGG + chr3_3:45976932-45976951 None:intergenic 55.0%
AAGGTAGAGGAAGGCCTCAG+AGG - chr3_3:45977962-45977981 Msa0454580:CDS 55.0%
GAGCTTATCTGCCACCTCTG+AGG + chr3_3:45977979-45977998 None:intergenic 55.0%
CGTCCGGCATAAAGACAGTC+TGG + chr3_3:45978003-45978022 None:intergenic 55.0%
TGGAGTCCGGTCTTGGATTC+TGG - chr3_3:45979015-45979034 Msa0454580:CDS 55.0%
GTCCGGTCTTGGATTCTGGT+AGG - chr3_3:45979019-45979038 Msa0454580:CDS 55.0%
GGCCTACCAGAATCCAAGAC+CGG + chr3_3:45979024-45979043 None:intergenic 55.0%
!! TCCGAGAAGTGCTTCATCGC+AGG - chr3_3:45979097-45979116 Msa0454580:CDS 55.0%
ATCGGAGCTCATCTTGCAGC+TGG - chr3_3:45979651-45979670 Msa0454580:CDS 55.0%
GGTGGCTCTTCGCTTCTCTT+TGG - chr3_3:45979720-45979739 Msa0454580:CDS 55.0%
! TCGCTTCTCTTTGGTGCAGC+CGG - chr3_3:45979729-45979748 Msa0454580:CDS 55.0%
!! GCAACTGCAGCTGGTGTTGT+AGG - chr3_3:45979753-45979772 Msa0454580:CDS 55.0%
GTTGTAGGGGCTGCTGCTAT+CGG - chr3_3:45979768-45979787 Msa0454580:CDS 55.0%
CGGTCATAGAAACAGGTCCG+CGG - chr3_3:45979788-45979807 Msa0454580:CDS 55.0%
CATAGAAACAGGTCCGCGGA+AGG - chr3_3:45979792-45979811 Msa0454580:CDS 55.0%
!! AGGGAAAGGAGGTGTTCCAC+AGG - chr3_3:45979873-45979892 Msa0454580:CDS 55.0%
!! GGGAAAGGAGGTGTTCCACA+GGG - chr3_3:45979874-45979893 Msa0454580:CDS 55.0%
TCGACGCACTACCGCTACCT+GGG + chr3_3:45977057-45977076 None:intergenic 60.0%
ATCGACGCACTACCGCTACC+TGG + chr3_3:45977058-45977077 None:intergenic 60.0%
GTAGAGGAAGGCCTCAGAGG+TGG - chr3_3:45977965-45977984 Msa0454580:CDS 60.0%
GCACACATGGAGTCCGGTCT+TGG - chr3_3:45979008-45979027 Msa0454580:CDS 60.0%
! CGCTTCTCTTTGGTGCAGCC+GGG - chr3_3:45979730-45979749 Msa0454580:CDS 60.0%
! GCTTCTCTTTGGTGCAGCCG+GGG - chr3_3:45979731-45979750 Msa0454580:CDS 60.0%
AACACCAGCTGCAGTTGCCC+CGG + chr3_3:45979751-45979770 None:intergenic 60.0%
AGGTCCGCGGAAGGTTCAAG+AGG - chr3_3:45979801-45979820 Msa0454580:CDS 60.0%
GCAGCCGGGGCAACTGCAGC+TGG - chr3_3:45979744-45979763 Msa0454580:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 45974879 45980019 45974879 ID=Msa0454580;Name=Msa0454580
chr3_3 mRNA 45974879 45980019 45974879 ID=Msa0454580-mRNA-1;Parent=Msa0454580;Name=Msa0454580-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0.5|0|1|1|1|3|0|1379
chr3_3 exon 45978513 45980019 45978513 ID=Msa0454580-mRNA-1:exon:8552;Parent=Msa0454580-mRNA-1
chr3_3 exon 45976812 45978058 45976812 ID=Msa0454580-mRNA-1:exon:8551;Parent=Msa0454580-mRNA-1
chr3_3 exon 45974879 45976264 45974879 ID=Msa0454580-mRNA-1:exon:8550;Parent=Msa0454580-mRNA-1
chr3_3 CDS 45978513 45980019 45978513 ID=Msa0454580-mRNA-1:cds;Parent=Msa0454580-mRNA-1
chr3_3 CDS 45976812 45978058 45976812 ID=Msa0454580-mRNA-1:cds;Parent=Msa0454580-mRNA-1
chr3_3 CDS 45974879 45976264 45974879 ID=Msa0454580-mRNA-1:cds;Parent=Msa0454580-mRNA-1
Gene Sequence

>Msa0454580

ATGTCATCAAACCAGAACCTAAAAGACCTACAATGGTCTCATCAAGCAATCAACATGATGGAGAACCAAAATCTACACAGCATTTCCTTCTACCTTTCCCAACCAACTTCAACTTGTTACCAAGAAACAAACAACTCCATAAACATAAACATTTCCAAACAAAATCAGCAACATTTTTCCAACCTTTTAGCAACATTAGCATCATGTCACCACACAAATTCAACCTTGAAAAACTTGGAGTTTCACAAAGTTGAATGGGAATCACAACAGGTAAAAAACCTTGGAACTCTTCTGAGTAATCATTCTATAAAGCAAGTTGTTTTTAGAAGAAACAGGTTCAATGGAAAAACTATGTTAGATCTTTCTGACATTTTGAAGGAGAATAAAGTGTTAAAAGAGATTATGTTTTCAGAATCATGTATTGGTTCTGTTGGAGCTTGTTTACTTGCTTCTTCACTTATGGTGAATCATAGTTTGGAGGAGTTGCAGATTTGGGAAGATTCAATAGGTTCAAGAGGTGCTGAAGAGATTTCAAAGATGATTGAAGTTAATCCATCTCTTAAGCTGTTAACAATTTTTGACTCAAATTTTATCACAGCTACACCTCTTATATCTGCAGTTTTGGCTAGGAATAGAACCATGGAAGTTCATGTTTGGAGTGGTGATCAAAATGGTGAAAGAAGTTCCAAGGTTGTTGAGTTTGTACCTGGGAACAATACATTAAGAATTTACAAGCTTAACTTTTCAGGTACTTGTAGGGTTGCTTGTTCCTTAGGAATGAATTTCACAGTTAAATCACTTGATATGACTGGTGTTAAGATAAAATCAAAGTGTGCTAAGGAATTTAGATGGGTTTTAGAACAAAACCAAACCCTAAAAGAGGTTAATTTTTCAAGAACATGTCTGAAAGATAAGGGCATTGTGTATATTGCTGCTGGACTATTTAAAAATCATAGTCTGCAAAAATTACATGTAGCAGGAAATTGGTTCCGCGGAATCGGTGTCGAGCATTTACTTTGTCCTTTGAGTAGATTTTCATCGTTGCAAATGCAAGCTAACACTAGTTTGAAATGTGTTACTTTGGGGGGAGGGAGAACAAGAATAGGAAGGGATGGTTTAGTGGCTATAACACAGTTTCTAGTAACGAATGAGACGGTGACACGGTTCGGGATACATGATGATGAGAGTTTGAGGCCAGATGATTTTGTTAAAATCTTCAGGAGTTTAGAGAAGAATGCTAGCTTGAAATGTTTGTCTTTACAAGGTTGTAAAGGTGTTCAAGGAGAGATTTTGCTGCAGACAATTATGGAGACACTTCAGATAAATCCTTGGATTGAAGAAATTGATCTTACTAGAACACCTTTACATAATTCTGGAGAGTCTATTGGGATTTATCAGAGATTAGGGCAGAATGAAAATCCTGAACCAGAAATGGATTTGATCAAAGATATGCCACTCACTGAGCCTAAGAGTTGCAGAGTTTTCTTTTGTGGACAAGAATATGCAGGAAAAACCACACTTTGTCATTCAATATCACAAAACTTCTCTGCTTCAGCGGCACTACCCTACTTGGATCAAGTAAGGACAATAGTGAATCCAGTGGAGCAGGCTGTCAAAACAGTTGGAATGAAGATAAAAACATTCAAGGATGAGGATACAAAGATTTCAATATGGAATCTTGCTGGTCAACATGAGTTTTTCTCCCTCCATGATCTTATGTTCCCAGGTAGCGGTAGTGCGTCGATTTTCATCGTTATATTGAGTTTATTCAGGAAGCCAAGTAACAGAGAACCAAAAAGCACTGCAGAGATTGAAGAGGATTTGCAATATTGGCTTAGGTTCATAGTTTCCAATTCCAAAAGAGCAGGACAACAATGCATGCTACCAAGTGTAGCTGTAGTGCTGACACACTTTGATAAAATCAACCAATCATCACAAAATCTGCAGCAAACGGTAGATTCAATTCAGAGATTGAGAGACAAGTTTCAAGGCTATGTTGATTTCTACCAAACTGTATTCACAGTTGACGCAAGATCATCAGCATCAGTTGGTAAACTCACTCATCACATCCGAAAGACGTGCAAAACAATTCTCCAAAGAGTACCACGAGTTTATCAACTTTGCAACGATCTAATACAGATTTTATCAGAGTGGAGATCAGAGAATTACAACAAGCCAGCTATGAAGTGGAAGGAGTTTGGTGAGCTGTGTCAAGTAAAAGTCCCATATTTGAGAATCCGATCGAGACATTATAATAAAGAAGCGGTGGAAGTGAAGCGAAAAGCTATAGCTACTTGTCTTCATCACATTGGCGAAGTGATTTATTTTGATGAGTTGGAGTTTTTAATTTTAGATTGTGAGTGGTTCTGTGGTGAAGTACTTGGTCAGCTCCTAAAGTTGAATGTCAGAAGGCAACAATCTTCGGAAAACAATGGATTCATTAGTAGGAAGGAACTTGAGAAAATCTTAAGAGGAAGTTTACAAAGTCCAATTCCTGGTATGGGGTCAAAGGTATTTGAGAACTTAGATGCTAGTGACCTTGTGAGAATGATGCTAAAACTGGAACTTTGTTATGAGCAAGATCCGTCAGATCAAAATTCTCTACTGTTGATTCCTTCCATTCTTGAAGAAGGTAGAGGAAGGCCTCAGAGGTGGCAGATAAGCTCACCAGACTGTCTTTATGCCGGACGCCATCTTGAATGTGATGATTCGAGTCATACGTTTCTAACACCAGGATTCTTCCCTCGCTTACAGGTACACCTTCACAACAAAATAAAGGCTCTGATGAATCAACACGGCGCAACTTACAGTCTTGAAAAGTACCTCATTTCAATCAGCATTAATGGAATATACATCAGAGTTGAGCTTGGAGGACAACTAGGTTACTACATCGACATTCTTGCATGCTCCACCAAAAATTTGACAGAAACTTTAAGAGTCATTCAGCAACTTATAATCCCGGCGATTCAAAGTGTTTGCCATGGGATCACCTTGACAGAAAATGTCATTAGACCTGAATGTGTGCAAAGTTTGACACCCCCTAGGTACAGAAGAACTCAATTTGCTTCCCTGCAGCAACTGAAACAAGCACTACTATCACTTCCAGCAGACAGCATGTATGATTATCAGCACACATGGAGTCCGGTCTTGGATTCTGGTAGGCCTATTCTCCAAGAAGGGTTTGATTTTGCGCGAGACCTTTTATCGGATGATGACTTCCGAGAAGTGCTTCATCGCAGGTATCATGACCTACACAATCTTGCTCAGGAGCTGCAAATCCCACCTGAAAATAACACTGAAGGGCGAGATCAAGATATAACCTTAAGCAATGAAGCTGAGAAAGTTGAACCATCCTTTGGTGGCATTGCAAAAGGGGTTGAAGAAGTTTTACAGAGACTCAAAATTATTGAACAAGAAATCAGAGACTTGAAGCAAGAAATCCAAGGGCTAAGATATTATGAACACAGGCTCCTACTTGAGCTTCATCGCAAAGTGAATTACATAGCAACCTTCAATGCACAAGTTGAGGAAAGGAAAGTACCGAACATGTTCTATTTTGTAAAAGCAGAAAACTACTCAAGGAGACTGATCACCACCATGGTTTCTGGCATGACTGCTCTCCGGCTTCACATGTTATGCGAGTTCCGAGGACAAATGCATGTTGTTGAAGATCAGATGGGCTGTGAAATGATGCAAGTTGATAACATGGCTGTGAAGTCTTTGGCTCCATATATGAAGAAGTTCATGGTCATGGTAACTTTTGCTCTTAAAATCGGAGCTCATCTTGCAGCTGGAATGGGGCAAATGATACCAGATTTGAGCAAGGAAGTGGCTCATTTGGGTGGCTCTTCGCTTCTCTTTGGTGCAGCCGGGGCAACTGCAGCTGGTGTTGTAGGGGCTGCTGCTATCGGTCATAGAAACAGGTCCGCGGAAGGTTCAAGAGGCATTCAACAAGACATAAAAGCAGCACAGCAATGGATGGTTGATTTCTTAAGGGAAAGGAGGTGTTCCACAGGGAAAGATATTGCAGAGAAGTTTGGACTGTGGCGAGTAAGGTATAGGGACAATGGTCAGATTGCATGGATCTGTAGGCAGCACATGTATTCCAGATCTGCAGAGATAATTGAAGTGCCTATTTGA
Protein sequence

>Msa0454580

MSSNQNLKDLQWSHQAINMMENQNLHSISFYLSQPTSTCYQETNNSININISKQNQQHFSNLLATLASCHHTNSTLKNLEFHKVEWESQQVKNLGTLLSNHSIKQVVFRRNRFNGKTMLDLSDILKENKVLKEIMFSESCIGSVGACLLASSLMVNHSLEELQIWEDSIGSRGAEEISKMIEVNPSLKLLTIFDSNFITATPLISAVLARNRTMEVHVWSGDQNGERSSKVVEFVPGNNTLRIYKLNFSGTCRVACSLGMNFTVKSLDMTGVKIKSKCAKEFRWVLEQNQTLKEVNFSRTCLKDKGIVYIAAGLFKNHSLQKLHVAGNWFRGIGVEHLLCPLSRFSSLQMQANTSLKCVTLGGGRTRIGRDGLVAITQFLVTNETVTRFGIHDDESLRPDDFVKIFRSLEKNASLKCLSLQGCKGVQGEILLQTIMETLQINPWIEEIDLTRTPLHNSGESIGIYQRLGQNENPEPEMDLIKDMPLTEPKSCRVFFCGQEYAGKTTLCHSISQNFSASAALPYLDQVRTIVNPVEQAVKTVGMKIKTFKDEDTKISIWNLAGQHEFFSLHDLMFPGSGSASIFIVILSLFRKPSNREPKSTAEIEEDLQYWLRFIVSNSKRAGQQCMLPSVAVVLTHFDKINQSSQNLQQTVDSIQRLRDKFQGYVDFYQTVFTVDARSSASVGKLTHHIRKTCKTILQRVPRVYQLCNDLIQILSEWRSENYNKPAMKWKEFGELCQVKVPYLRIRSRHYNKEAVEVKRKAIATCLHHIGEVIYFDELEFLILDCEWFCGEVLGQLLKLNVRRQQSSENNGFISRKELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEQDPSDQNSLLLIPSILEEGRGRPQRWQISSPDCLYAGRHLECDDSSHTFLTPGFFPRLQVHLHNKIKALMNQHGATYSLEKYLISISINGIYIRVELGGQLGYYIDILACSTKNLTETLRVIQQLIIPAIQSVCHGITLTENVIRPECVQSLTPPRYRRTQFASLQQLKQALLSLPADSMYDYQHTWSPVLDSGRPILQEGFDFARDLLSDDDFREVLHRRYHDLHNLAQELQIPPENNTEGRDQDITLSNEAEKVEPSFGGIAKGVEEVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNYIATFNAQVEERKVPNMFYFVKAENYSRRLITTMVSGMTALRLHMLCEFRGQMHVVEDQMGCEMMQVDNMAVKSLAPYMKKFMVMVTFALKIGAHLAAGMGQMIPDLSKEVAHLGGSSLLFGAAGATAAGVVGAAAIGHRNRSAEGSRGIQQDIKAAQQWMVDFLRERRCSTGKDIAEKFGLWRVRYRDNGQIAWICRQHMYSRSAEIIEVPI*