Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458020 | XP_013465400.1 | 95.918 | 147 | 6 | 0 | 1 | 147 | 1 | 147 | 7.48e-79 | 240 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458020 | sp|Q41050|OEP16_PEA | 83.916 | 143 | 23 | 0 | 1 | 143 | 1 | 143 | 2.36e-68 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458020 | A0A072VMU1 | 95.918 | 147 | 6 | 0 | 1 | 147 | 1 | 147 | 3.57e-79 | 240 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0057260 | Msa0458020 | 0.819102 | 1.385352e-52 | -8.615850e-47 |
| Msa0222900 | Msa0458020 | 0.983525 | 5.558590e-158 | -8.615850e-47 |
| Msa0264340 | Msa0458020 | 0.983001 | 1.447967e-156 | -8.615850e-47 |
| Msa0302460 | Msa0458020 | 0.969060 | 1.430178e-129 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458020 | MtrunA17_Chr2g0328131 | 95.918 | 147 | 6 | 0 | 1 | 147 | 1 | 147 | 6.88e-83 | 240 |
| Msa0458020 | MtrunA17_Chr2g0328141 | 83.562 | 146 | 24 | 0 | 1 | 146 | 1 | 146 | 1.18e-74 | 219 |
| Msa0458020 | MtrunA17_Chr4g0068231 | 34.416 | 154 | 74 | 3 | 18 | 144 | 24 | 177 | 3.47e-22 | 87.0 |
| Msa0458020 | MtrunA17_Chr2g0294641 | 33.548 | 155 | 75 | 3 | 18 | 144 | 26 | 180 | 1.73e-19 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458020 | AT2G28900.1 | 61.224 | 147 | 57 | 0 | 1 | 147 | 1 | 147 | 5.25e-62 | 187 |
| Msa0458020 | AT4G16160.1 | 32.026 | 153 | 77 | 3 | 18 | 143 | 21 | 173 | 8.48e-19 | 78.6 |
| Msa0458020 | AT4G16160.2 | 31.613 | 155 | 77 | 3 | 18 | 143 | 21 | 175 | 1.23e-18 | 78.2 |
Find 124 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGATAATGAAGGAATTT+TGG | 0.142163 | 3_3:-53167338 | Msa0458020:three_prime_UTR |
| TTCTGTCAATTCTTGGTCTT+TGG | 0.203392 | 3_3:-53167917 | Msa0458020:three_prime_UTR |
| CCTTTGCCAATGTGAGTCTT+AGG | 0.217782 | 3_3:+53167180 | Msa0458010:intron |
| ATGCCTCATAGCAGCATTTC+AGG | 0.220503 | 3_3:-53169633 | Msa0458020:CDS |
| TTCAGCTTTCTGTCAATTCT+TGG | 0.245659 | 3_3:-53167924 | Msa0458020:three_prime_UTR |
| CTTCTCAACCTCACTGTTGA+TGG | 0.269257 | 3_3:-53169561 | Msa0458020:CDS |
| CACAAAAGTGTGACCACTTA+TGG | 0.284275 | 3_3:+53169781 | None:intergenic |
| CATCCAAACTCGTTCCAAAA+AGG | 0.284341 | 3_3:-53167130 | Msa0458020:three_prime_UTR |
| GCTGGCTGCTGAGTGGTTAC+TGG | 0.311741 | 3_3:+53167371 | Msa0458010:intron |
| TTGAAAAGGGGTTGCACATT+TGG | 0.315261 | 3_3:-53168011 | Msa0458020:three_prime_UTR |
| AGTCTGGGCAAAAGAGTTAT+AGG | 0.327469 | 3_3:-53167411 | Msa0458020:three_prime_UTR |
| TCTAAGCAAGCATCCTCTTT+AGG | 0.329719 | 3_3:+53167624 | Msa0458010:intron |
| ATTGTAGTAGGTGCCATTAC+AGG | 0.330295 | 3_3:-53168119 | Msa0458020:CDS |
| ACTGCTGCAGCATTCATAAA+TGG | 0.345573 | 3_3:-53168083 | Msa0458020:CDS |
| GGAACAGCCAAAGACAAAAC+TGG | 0.362261 | 3_3:+53167459 | Msa0458010:intron |
| CATTTAAAGAAGGTGCATAC+TGG | 0.364036 | 3_3:-53168668 | Msa0458020:CDS |
| TAAATGGCTGGAGTTTCTAA+TGG | 0.368333 | 3_3:-53168067 | Msa0458020:exon |
| CATCAAAATTATTACATAAC+CGG | 0.374833 | 3_3:+53167970 | Msa0458010:intron |
| ATATATATCATGATTTCAAC+AGG | 0.380020 | 3_3:+53167734 | Msa0458010:intron |
| CTATTATTCCATGTTTGAAA+AGG | 0.387461 | 3_3:-53168025 | Msa0458020:three_prime_UTR |
| TTTAAATAATTAAAAGTTCA+CGG | 0.387657 | 3_3:+53169857 | None:intergenic |
| GTTGATGGTTTCTTGAAGAT+TGG | 0.388016 | 3_3:-53169546 | Msa0458020:CDS |
| CTTAGTCTTCCTACCAGGCT+TGG | 0.394054 | 3_3:+53167215 | Msa0458010:intron |
| TGTGGATGAAGATTTGAGTC+TGG | 0.401407 | 3_3:-53167427 | Msa0458020:three_prime_UTR |
| CTCAGACATTAACACTGATA+TGG | 0.403641 | 3_3:-53167289 | Msa0458020:three_prime_UTR |
| CAAATGTTGGACTCTGTCTC+GGG | 0.404366 | 3_3:-53167525 | Msa0458020:three_prime_UTR |
| AGATGCTATGTCAGTATGTT+TGG | 0.419644 | 3_3:+53167242 | Msa0458010:intron |
| AGCTACCAGCTTGAATGTTA+AGG | 0.419870 | 3_3:+53169709 | None:intergenic |
| TATTATTCCATGTTTGAAAA+GGG | 0.422205 | 3_3:-53168024 | Msa0458020:three_prime_UTR |
| GGATCCGTGGCACCAGAGAC+TGG | 0.423846 | 3_3:-53168509 | Msa0458020:CDS |
| ACATTTGGAGGTGCAGTGAC+AGG | 0.426302 | 3_3:-53168182 | Msa0458020:CDS |
| TTGGACTCTGTCTCGGGGAG+GGG | 0.430301 | 3_3:-53167519 | Msa0458020:three_prime_UTR |
| GAACACCGAACCACCAAACT+TGG | 0.430785 | 3_3:+53167489 | Msa0458010:intron |
| GTATATGTTGGAACAGAATA+CGG | 0.434501 | 3_3:-53168540 | Msa0458020:CDS |
| CTTTGCCAATGTGAGTCTTA+GGG | 0.439223 | 3_3:+53167181 | Msa0458010:intron |
| CGCAATTGCAGCCCCTGTAA+TGG | 0.440225 | 3_3:+53168106 | Msa0458010:CDS |
| AGGTGCAGTGACAGGGGCTC+TGG | 0.442203 | 3_3:-53168174 | Msa0458020:CDS |
| TGCTTCTTAGTCTTCCTACC+AGG | 0.442253 | 3_3:+53167210 | Msa0458010:intron |
| AGAGTTATAGGTGGAAAGTC+TGG | 0.443810 | 3_3:-53167399 | Msa0458020:three_prime_UTR |
| CACCTATTCCATTGGAATCA+AGG | 0.445195 | 3_3:-53167581 | Msa0458020:three_prime_UTR |
| GATGAAGGGGACGTGTTGTA+AGG | 0.446624 | 3_3:-53167769 | Msa0458020:three_prime_UTR |
| GTTGGACTCTGTCTCGGGGA+GGG | 0.450789 | 3_3:-53167520 | Msa0458020:three_prime_UTR |
| TGGACTCTGTCTCGGGGAGG+GGG | 0.451579 | 3_3:-53167518 | Msa0458020:three_prime_UTR |
| AAAGAAACCTGGGCATGAAC+AGG | 0.452707 | 3_3:-53167870 | Msa0458020:three_prime_UTR |
| GTGATCCAAGTTTGGTGGTT+CGG | 0.457160 | 3_3:-53167494 | Msa0458020:three_prime_UTR |
| GCAAATGTTGGACTCTGTCT+CGG | 0.470535 | 3_3:-53167526 | Msa0458020:three_prime_UTR |
| ATTTGCTTGTTAGAAACTAT+AGG | 0.472776 | 3_3:+53167543 | Msa0458010:intron |
| TTTCTGTGTATATCCTAAAG+AGG | 0.475750 | 3_3:-53167637 | Msa0458020:three_prime_UTR |
| GGCCTTGATTCCAATGGAAT+AGG | 0.478081 | 3_3:+53167579 | Msa0458010:intron |
| ACCCTTTCGAGCAATATCAT+AGG | 0.487140 | 3_3:+53169402 | None:intergenic |
| TGAGAGAATTACCCAGTCTC+TGG | 0.488901 | 3_3:+53168497 | None:intergenic |
| GTCAATGACCACATCGACCT+TGG | 0.493655 | 3_3:+53169596 | None:intergenic |
| ATTTAAAGAAGGTGCATACT+GGG | 0.494694 | 3_3:-53168667 | Msa0458020:CDS |
| AAGGCAGACAAGATTGTAGT+AGG | 0.498217 | 3_3:-53168131 | Msa0458020:CDS |
| AAGGGGACGTGTTGTAAGGT+AGG | 0.499858 | 3_3:-53167765 | Msa0458020:three_prime_UTR |
| GCTATAGCTGGTGTATATGT+TGG | 0.502697 | 3_3:-53168552 | Msa0458020:CDS |
| ACCTATGATATTGCTCGAAA+GGG | 0.504352 | 3_3:-53169403 | Msa0458020:intron |
| AACGTTAAACTTTATTCACC+TGG | 0.506197 | 3_3:+53167824 | Msa0458010:intron |
| ATCTTCATCCACAGAAGTGA+CGG | 0.511130 | 3_3:+53167437 | Msa0458010:intron |
| CTGCAGCATTCATAAATGGC+TGG | 0.512276 | 3_3:-53168079 | Msa0458020:CDS |
| AAATTTAAACATTAGCAGCC+AGG | 0.512839 | 3_3:-53167842 | Msa0458020:three_prime_UTR |
| ATCTGCAGCCAACAATGAAA+AGG | 0.513448 | 3_3:-53168150 | Msa0458020:CDS |
| TTGAAAACCTGTTCATGCCC+AGG | 0.516629 | 3_3:+53167863 | Msa0458010:intron |
| TCAATGACCACATCGACCTT+GGG | 0.517343 | 3_3:+53169597 | None:intergenic |
| TACCTATGATATTGCTCGAA+AGG | 0.522400 | 3_3:-53169404 | Msa0458020:CDS |
| TTGTAGTAGGTGCCATTACA+GGG | 0.523008 | 3_3:-53168118 | Msa0458020:CDS |
| AGTTTCTAACAAGCAAATGT+TGG | 0.526698 | 3_3:-53167538 | Msa0458020:three_prime_UTR |
| GCAAGATGCACCTATTCCAT+TGG | 0.528869 | 3_3:-53167589 | Msa0458020:three_prime_UTR |
| AGGATCAGTGTCTTCTCCCA+AGG | 0.530325 | 3_3:-53169613 | Msa0458020:CDS |
| TATATGTTGGAACAGAATAC+GGG | 0.530549 | 3_3:-53168539 | Msa0458020:CDS |
| GGCTGTTCCCGTCACTTCTG+TGG | 0.535219 | 3_3:-53167445 | Msa0458020:three_prime_UTR |
| GAACAGCCAAAGACAAAACT+GGG | 0.536588 | 3_3:+53167460 | Msa0458010:intron |
| CACATTGGCAAAGGTTCTGA+TGG | 0.538523 | 3_3:-53167171 | Msa0458020:three_prime_UTR |
| ACCTTCCTTAACATTCAAGC+TGG | 0.539605 | 3_3:-53169714 | Msa0458020:five_prime_UTR |
| GAGGATGCTTGCTTAGAGCC+AGG | 0.540490 | 3_3:-53167618 | Msa0458020:three_prime_UTR |
| CATCTAACACCAAGCCTGGT+AGG | 0.540647 | 3_3:-53167224 | Msa0458020:three_prime_UTR |
| GGTTCTAGATCATGAGATGA+AGG | 0.541822 | 3_3:-53167784 | Msa0458020:three_prime_UTR |
| CATTTGGAGGTGCAGTGACA+GGG | 0.546047 | 3_3:-53168181 | Msa0458020:CDS |
| TTGTTAGAAACTATAGGTAG+AGG | 0.547056 | 3_3:+53167549 | Msa0458010:intron |
| TAAAAGTGTGCAGATAATGA+AGG | 0.550725 | 3_3:-53167346 | Msa0458020:three_prime_UTR |
| ATAGCATCTAACACCAAGCC+TGG | 0.555962 | 3_3:-53167228 | Msa0458020:three_prime_UTR |
| ACGCTTACAGGAGCTATAGC+TGG | 0.557663 | 3_3:-53168564 | Msa0458020:intron |
| ATTATTCCATGTTTGAAAAG+GGG | 0.564765 | 3_3:-53168023 | Msa0458020:three_prime_UTR |
| GGTCGATGTGGTCATTGACA+TGG | 0.564917 | 3_3:-53169592 | Msa0458020:CDS |
| GATCCTGAAATGCTGCTATG+AGG | 0.565334 | 3_3:+53169630 | None:intergenic |
| ATCCTCTGCAAGTGCCCTTG+TGG | 0.568133 | 3_3:+53169426 | None:intergenic |
| GTGGATGAAGATTTGAGTCT+GGG | 0.570778 | 3_3:-53167426 | Msa0458020:three_prime_UTR |
| CTTTCAATCACAGCCATAAG+TGG | 0.570799 | 3_3:-53169794 | Msa0458020:five_prime_UTR |
| ACTATAGGTAGAGGCTGAGA+GGG | 0.572049 | 3_3:+53167558 | Msa0458010:intron |
| AACTATAGGTAGAGGCTGAG+AGG | 0.577361 | 3_3:+53167557 | Msa0458010:intron |
| TGTCACTGCACCTCCAAATG+TGG | 0.580744 | 3_3:+53168184 | Msa0458010:CDS |
| TGAGAGGGCCTTGATTCCAA+TGG | 0.582673 | 3_3:+53167573 | Msa0458010:intron |
| TGTTGGACTCTGTCTCGGGG+AGG | 0.585063 | 3_3:-53167521 | Msa0458020:three_prime_UTR |
| GGGGTGTGATCCAAGTTTGG+TGG | 0.586053 | 3_3:-53167499 | Msa0458020:three_prime_UTR |
| CTGAAGAAGACATTTAAAGA+AGG | 0.586357 | 3_3:-53168678 | Msa0458020:CDS |
| TTCTAGATCATGAGATGAAG+GGG | 0.587925 | 3_3:-53167782 | Msa0458020:three_prime_UTR |
| TTACCCAGTCTCTGGTGCCA+CGG | 0.593471 | 3_3:+53168505 | None:intergenic |
| GATCCGTGGCACCAGAGACT+GGG | 0.594640 | 3_3:-53168508 | Msa0458020:intron |
| AGCTTGAATGTTAAGGAAGG+TGG | 0.594953 | 3_3:+53169716 | None:intergenic |
| AGCCACAAGGGCACTTGCAG+AGG | 0.596020 | 3_3:-53169428 | Msa0458020:CDS |
| CATATCAGTGTTAATGTCTG+AGG | 0.597268 | 3_3:+53167290 | Msa0458010:intron |
| GTTCTAGATCATGAGATGAA+GGG | 0.598978 | 3_3:-53167783 | Msa0458020:three_prime_UTR |
| AAAAGCCCTAAGACTCACAT+TGG | 0.608767 | 3_3:-53167186 | Msa0458020:three_prime_UTR |
| TCTTCATCCACAGAAGTGAC+GGG | 0.611855 | 3_3:+53167438 | Msa0458010:intron |
| TACGGGGTGGAGAGGATCCG+TGG | 0.613293 | 3_3:-53168522 | Msa0458020:CDS |
| ATATACTACTATATAGCAAG+AGG | 0.614367 | 3_3:+53169752 | None:intergenic |
| CCTAAGACTCACATTGGCAA+AGG | 0.618293 | 3_3:-53167180 | Msa0458020:three_prime_UTR |
| GTCTTCTCCCAAGGTCGATG+TGG | 0.618468 | 3_3:-53169604 | Msa0458020:CDS |
| GAACAGAATACGGGGTGGAG+AGG | 0.619958 | 3_3:-53168530 | Msa0458020:CDS |
| GTCGATGTGGTCATTGACAT+GGG | 0.620754 | 3_3:-53169591 | Msa0458020:CDS |
| GGTGCATCTTGCTCTAGACC+TGG | 0.627077 | 3_3:+53167600 | Msa0458010:intron |
| ACCAGCTTGAATGTTAAGGA+AGG | 0.629164 | 3_3:+53169713 | None:intergenic |
| TCAACAGTGAGGTTGAGAAG+TGG | 0.636785 | 3_3:+53169564 | None:intergenic |
| ATTTGGAGGTGCAGTGACAG+GGG | 0.640699 | 3_3:-53168180 | Msa0458020:CDS |
| CTGGGCAAAAGAGTTATAGG+TGG | 0.668810 | 3_3:-53167408 | Msa0458020:three_prime_UTR |
| AAATGTTGGACTCTGTCTCG+GGG | 0.672447 | 3_3:-53167524 | Msa0458020:three_prime_UTR |
| AAGTTCACGGTTAATAAACG+AGG | 0.681334 | 3_3:+53169870 | None:intergenic |
| TTTAAAGAAGGTGCATACTG+GGG | 0.700970 | 3_3:-53168666 | Msa0458020:intron |
| TGTAGTAGGTGCCATTACAG+GGG | 0.704939 | 3_3:-53168117 | Msa0458020:CDS |
| TCAAGAAACCATCAACAGTG+AGG | 0.715759 | 3_3:+53169553 | None:intergenic |
| TGTTGGAACAGAATACGGGG+TGG | 0.732754 | 3_3:-53168535 | Msa0458020:CDS |
| TATATATCATGATTTCAACA+GGG | 0.732772 | 3_3:+53167735 | Msa0458010:intron |
| AACAGCCAAAGACAAAACTG+GGG | 0.763097 | 3_3:+53167461 | Msa0458010:intron |
| ATATGTTGGAACAGAATACG+GGG | 0.764667 | 3_3:-53168538 | Msa0458020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTAAAAATTATATTTT+AGG | + | chr3_3:53167895-53167914 | Msa0458010:intron | 0.0% |
| !! | TTTAAATAATTAAAAGTTCA+CGG | + | chr3_3:53167148-53167167 | Msa0458010:intron | 10.0% |
| !!! | AAATTATATTTTAGGAGTAA+AGG | + | chr3_3:53167887-53167906 | Msa0458010:intron | 15.0% |
| !!! | TTTTGGAGATTTTAACAAAA+GGG | + | chr3_3:53167651-53167670 | Msa0458010:intron | 20.0% |
| !! | AAAAGATGAAAACTTTGATT+CGG | - | chr3_3:53167667-53167686 | Msa0458020:three_prime_UTR | 20.0% |
| !!! | TTATCATGATTGATTCATTT+GGG | - | chr3_3:53167857-53167876 | Msa0458020:three_prime_UTR | 20.0% |
| !! | TATTTATCAAAGTTAAAGCA+TGG | + | chr3_3:53168123-53168142 | Msa0458010:CDS | 20.0% |
| !!! | ATGCTTTAACTTTGATAAAT+AGG | - | chr3_3:53168122-53168141 | Msa0458020:CDS | 20.0% |
| !!! | AAATGTGTTAACTTTGTTTT+AGG | - | chr3_3:53168700-53168719 | Msa0458020:intron | 20.0% |
| !! | AACTTAAATTGAACAATAGA+AGG | + | chr3_3:53168738-53168757 | None:intergenic | 20.0% |
| !! | TATTATTCCATGTTTGAAAA+GGG | - | chr3_3:53168978-53168997 | Msa0458020:intron | 20.0% |
| !! | CATCAAAATTATTACATAAC+CGG | + | chr3_3:53169035-53169054 | None:intergenic | 20.0% |
| !!! | CGTTTTCATAAATATTATTG+CGG | - | chr3_3:53169197-53169216 | Msa0458020:intron | 20.0% |
| !! | TATATATCATGATTTCAACA+GGG | + | chr3_3:53169270-53169289 | None:intergenic | 20.0% |
| !! | ATATATATCATGATTTCAAC+AGG | + | chr3_3:53169271-53169290 | None:intergenic | 20.0% |
| !!! | TTCAGTATTTTTTAAAGCAA+CGG | + | chr3_3:53169309-53169328 | None:intergenic | 20.0% |
| ! | ATATACTACTATATAGCAAG+AGG | + | chr3_3:53167253-53167272 | Msa0458010:intron | 25.0% |
| !!! | CTTTTGGAGATTTTAACAAA+AGG | + | chr3_3:53167652-53167671 | Msa0458010:intron | 25.0% |
| !! | GAATCAAAGTTTTCATCTTT+TGG | + | chr3_3:53167668-53167687 | Msa0458010:intron | 25.0% |
| ! | AAAGATGAAAACTTTGATTC+GGG | - | chr3_3:53167668-53167687 | Msa0458020:three_prime_UTR | 25.0% |
| !! | CTTATCATGATTGATTCATT+TGG | - | chr3_3:53167856-53167875 | Msa0458020:three_prime_UTR | 25.0% |
| !! | TATCATGATTGATTCATTTG+GGG | - | chr3_3:53167858-53167877 | Msa0458020:three_prime_UTR | 25.0% |
| ! | CAATAATGTGATTTGAACTT+GGG | - | chr3_3:53167976-53167995 | Msa0458020:three_prime_UTR | 25.0% |
| ! | AGACAAAATGTCTATTGAAT+GGG | + | chr3_3:53168259-53168278 | None:intergenic | 25.0% |
| ! | TAGACAAAATGTCTATTGAA+TGG | + | chr3_3:53168260-53168279 | None:intergenic | 25.0% |
| ! | GAAAACACTTAAAATAGACT+TGG | - | chr3_3:53168539-53168558 | Msa0458020:CDS | 25.0% |
| ! | AGAGATTAGATGTCATTATA+TGG | + | chr3_3:53168617-53168636 | None:intergenic | 25.0% |
| ! | CTATTATTCCATGTTTGAAA+AGG | - | chr3_3:53168977-53168996 | Msa0458020:intron | 25.0% |
| ! | ATTATTCCATGTTTGAAAAG+GGG | - | chr3_3:53168979-53168998 | Msa0458020:intron | 25.0% |
| !! | CGGTTATGTAATAATTTTGA+TGG | - | chr3_3:53169033-53169052 | Msa0458020:intron | 25.0% |
| !! | ACTTTTAGTATAAAGAAACC+TGG | - | chr3_3:53169121-53169140 | Msa0458020:intron | 25.0% |
| !! | CTTTTAGTATAAAGAAACCT+GGG | - | chr3_3:53169122-53169141 | Msa0458020:intron | 25.0% |
| !! | ATTTGCTTGTTAGAAACTAT+AGG | + | chr3_3:53169462-53169481 | None:intergenic | 25.0% |
| GCAATAATGTGATTTGAACT+TGG | - | chr3_3:53167975-53167994 | Msa0458020:three_prime_UTR | 30.0% | |
| TCCTAGAAAAGAATAATGAC+AGG | - | chr3_3:53168007-53168026 | Msa0458020:three_prime_UTR | 30.0% | |
| ! | TCCTGTCATTATTCTTTTCT+AGG | + | chr3_3:53168011-53168030 | Msa0458010:intron | 30.0% |
| AATGAGAGAATCCGAATTTA+GGG | + | chr3_3:53168038-53168057 | Msa0458010:intron | 30.0% | |
| AAATGAGAGAATCCGAATTT+AGG | + | chr3_3:53168039-53168058 | Msa0458010:intron | 30.0% | |
| TTGAGCTGTTTGATCAAAAT+CGG | - | chr3_3:53168092-53168111 | Msa0458020:CDS | 30.0% | |
| TGAGAATCTAAATCCTGAAA+AGG | - | chr3_3:53168225-53168244 | Msa0458020:intron | 30.0% | |
| GAGAATCTAAATCCTGAAAA+GGG | - | chr3_3:53168226-53168245 | Msa0458020:intron | 30.0% | |
| CTGAAGAAGACATTTAAAGA+AGG | - | chr3_3:53168324-53168343 | Msa0458020:intron | 30.0% | |
| ! | ATTTAAAGAAGGTGCATACT+GGG | - | chr3_3:53168335-53168354 | Msa0458020:intron | 30.0% |
| GTATATGTTGGAACAGAATA+CGG | - | chr3_3:53168462-53168481 | Msa0458020:intron | 30.0% | |
| TATATGTTGGAACAGAATAC+GGG | - | chr3_3:53168463-53168482 | Msa0458020:intron | 30.0% | |
| AAATTGAACAATAGAAGGCA+TGG | + | chr3_3:53168733-53168752 | None:intergenic | 30.0% | |
| AAATTTAAACATTAGCAGCC+AGG | - | chr3_3:53169160-53169179 | Msa0458020:intron | 30.0% | |
| AACGTTAAACTTTATTCACC+TGG | + | chr3_3:53169181-53169200 | None:intergenic | 30.0% | |
| TTTCTGTGTATATCCTAAAG+AGG | - | chr3_3:53169365-53169384 | Msa0458020:intron | 30.0% | |
| TTGTTAGAAACTATAGGTAG+AGG | + | chr3_3:53169456-53169475 | None:intergenic | 30.0% | |
| AGTTTCTAACAAGCAAATGT+TGG | - | chr3_3:53169464-53169483 | Msa0458020:intron | 30.0% | |
| ! | TCATTATCTGCACACTTTTA+AGG | + | chr3_3:53169656-53169675 | None:intergenic | 30.0% |
| ! | TAAAAGTGTGCAGATAATGA+AGG | - | chr3_3:53169656-53169675 | Msa0458020:five_prime_UTR | 30.0% |
| ! | TGCAGATAATGAAGGAATTT+TGG | - | chr3_3:53169664-53169683 | Msa0458020:five_prime_UTR | 30.0% |
| ! | GCAGATAATGAAGGAATTTT+GGG | - | chr3_3:53169665-53169684 | Msa0458020:five_prime_UTR | 30.0% |
| ! | CAGATAATGAAGGAATTTTG+GGG | - | chr3_3:53169666-53169685 | Msa0458020:five_prime_UTR | 30.0% |
| AAGTTCACGGTTAATAAACG+AGG | + | chr3_3:53167135-53167154 | Msa0458010:intron | 35.0% | |
| !! | GTTGATGGTTTCTTGAAGAT+TGG | - | chr3_3:53167456-53167475 | Msa0458020:three_prime_UTR | 35.0% |
| TACCTATGATATTGCTCGAA+AGG | - | chr3_3:53167598-53167617 | Msa0458020:three_prime_UTR | 35.0% | |
| ACCTATGATATTGCTCGAAA+GGG | - | chr3_3:53167599-53167618 | Msa0458020:three_prime_UTR | 35.0% | |
| CAAAAGGGTTATAGCAAAAG+TGG | + | chr3_3:53167636-53167655 | Msa0458010:intron | 35.0% | |
| TTGGTATGTATGCATCTTTG+AGG | - | chr3_3:53167953-53167972 | Msa0458020:three_prime_UTR | 35.0% | |
| TAATGTGATTTGAACTTGGG+AGG | - | chr3_3:53167979-53167998 | Msa0458020:three_prime_UTR | 35.0% | |
| ATGAGAGAATCCGAATTTAG+GGG | + | chr3_3:53168037-53168056 | Msa0458010:intron | 35.0% | |
| ACTGACATATCAAGATCAGA+TGG | + | chr3_3:53168173-53168192 | Msa0458010:CDS | 35.0% | |
| ACAAGGAACAAAGCATATCA+TGG | + | chr3_3:53168283-53168302 | None:intergenic | 35.0% | |
| CTTTGTTCCTTGTTAATGAG+AGG | - | chr3_3:53168290-53168309 | Msa0458020:intron | 35.0% | |
| AACAAGACCTCTCATTAACA+AGG | + | chr3_3:53168300-53168319 | None:intergenic | 35.0% | |
| ! | CATTTAAAGAAGGTGCATAC+TGG | - | chr3_3:53168334-53168353 | Msa0458020:intron | 35.0% |
| ! | TTTAAAGAAGGTGCATACTG+GGG | - | chr3_3:53168336-53168355 | Msa0458020:intron | 35.0% |
| ! | ATTTTCCTTTCTACGCTTAC+AGG | - | chr3_3:53168426-53168445 | Msa0458020:intron | 35.0% |
| ATATGTTGGAACAGAATACG+GGG | - | chr3_3:53168464-53168483 | Msa0458020:intron | 35.0% | |
| ACTGGGTAATTCTCTCAATA+GGG | - | chr3_3:53168511-53168530 | Msa0458020:CDS | 35.0% | |
| !! | TAGAGAGAGCACTTTATTTC+TGG | - | chr3_3:53168582-53168601 | Msa0458020:intron | 35.0% |
| TCTGTACATCAAAAGACCAA+GGG | + | chr3_3:53168792-53168811 | None:intergenic | 35.0% | |
| TTCTGTACATCAAAAGACCA+AGG | + | chr3_3:53168793-53168812 | None:intergenic | 35.0% | |
| GTACAGAAAAATGCCACATT+TGG | - | chr3_3:53168805-53168824 | Msa0458020:intron | 35.0% | |
| TAAATGGCTGGAGTTTCTAA+TGG | - | chr3_3:53168935-53168954 | Msa0458020:intron | 35.0% | |
| TTCAGCTTTCTGTCAATTCT+TGG | - | chr3_3:53169078-53169097 | Msa0458020:intron | 35.0% | |
| ! | TTCTGTCAATTCTTGGTCTT+TGG | - | chr3_3:53169085-53169104 | Msa0458020:intron | 35.0% |
| ! | GTTCTAGATCATGAGATGAA+GGG | - | chr3_3:53169219-53169238 | Msa0458020:intron | 35.0% |
| TTCTAGATCATGAGATGAAG+GGG | - | chr3_3:53169220-53169239 | Msa0458020:intron | 35.0% | |
| CATATCAGTGTTAATGTCTG+AGG | + | chr3_3:53169715-53169734 | None:intergenic | 35.0% | |
| CTCAGACATTAACACTGATA+TGG | - | chr3_3:53169713-53169732 | Msa0458020:five_prime_UTR | 35.0% | |
| AGATGCTATGTCAGTATGTT+TGG | + | chr3_3:53169763-53169782 | None:intergenic | 35.0% | |
| ATCCAAACTCGTTCCAAAAA+GGG | - | chr3_3:53169873-53169892 | Msa0458020:five_prime_UTR | 35.0% | |
| CTTTCAATCACAGCCATAAG+TGG | - | chr3_3:53167208-53167227 | Msa0458020:three_prime_UTR | 40.0% | |
| ! | CACAAAAGTGTGACCACTTA+TGG | + | chr3_3:53167224-53167243 | Msa0458010:intron | 40.0% |
| AGCTTGAATGTTAAGGAAGG+TGG | + | chr3_3:53167289-53167308 | Msa0458010:intron | 40.0% | |
| ACCTTCCTTAACATTCAAGC+TGG | - | chr3_3:53167288-53167307 | Msa0458020:three_prime_UTR | 40.0% | |
| ACCAGCTTGAATGTTAAGGA+AGG | + | chr3_3:53167292-53167311 | Msa0458010:intron | 40.0% | |
| AGCTACCAGCTTGAATGTTA+AGG | + | chr3_3:53167296-53167315 | Msa0458010:intron | 40.0% | |
| TCAAGAAACCATCAACAGTG+AGG | + | chr3_3:53167452-53167471 | Msa0458010:intron | 40.0% | |
| ACCCTTTCGAGCAATATCAT+AGG | + | chr3_3:53167603-53167622 | Msa0458010:intron | 40.0% | |
| CTTCTAAACATGTCTGTTCC+AGG | - | chr3_3:53167773-53167792 | Msa0458020:three_prime_UTR | 40.0% | |
| ! | CATGATTGATTCATTTGGGG+TGG | - | chr3_3:53167861-53167880 | Msa0458020:three_prime_UTR | 40.0% |
| TTCACGTAATCACACACTTG+CGG | + | chr3_3:53168202-53168221 | Msa0458010:CDS | 40.0% | |
| ATCTAAATCCTGAAAAGGGC+AGG | - | chr3_3:53168230-53168249 | Msa0458020:intron | 40.0% | |
| GCTATAGCTGGTGTATATGT+TGG | - | chr3_3:53168450-53168469 | Msa0458020:intron | 40.0% | |
| GACTGGGTAATTCTCTCAAT+AGG | - | chr3_3:53168510-53168529 | Msa0458020:CDS | 40.0% | |
| TCAAAAGACCAAGGGAACAA+CGG | + | chr3_3:53168784-53168803 | None:intergenic | 40.0% | |
| CAGAAAAATGCCACATTTGG+AGG | - | chr3_3:53168808-53168827 | Msa0458020:intron | 40.0% | |
| ATCTGCAGCCAACAATGAAA+AGG | - | chr3_3:53168852-53168871 | Msa0458020:intron | 40.0% | |
| ! | CTTGTCTGCCTTTTCATTGT+TGG | + | chr3_3:53168863-53168882 | None:intergenic | 40.0% |
| AAGGCAGACAAGATTGTAGT+AGG | - | chr3_3:53168871-53168890 | Msa0458020:intron | 40.0% | |
| !! | ATTGTAGTAGGTGCCATTAC+AGG | - | chr3_3:53168883-53168902 | Msa0458020:intron | 40.0% |
| !! | TTGTAGTAGGTGCCATTACA+GGG | - | chr3_3:53168884-53168903 | Msa0458020:intron | 40.0% |
| ACTGCTGCAGCATTCATAAA+TGG | - | chr3_3:53168919-53168938 | Msa0458020:intron | 40.0% | |
| TTGAAAAGGGGTTGCACATT+TGG | - | chr3_3:53168991-53169010 | Msa0458020:intron | 40.0% | |
| ! | GTCTCTTTTGTCTGTCTTAC+CGG | - | chr3_3:53169013-53169032 | Msa0458020:intron | 40.0% |
| !! | GGTTCTAGATCATGAGATGA+AGG | - | chr3_3:53169218-53169237 | Msa0458020:intron | 40.0% |
| TCTAAGCAAGCATCCTCTTT+AGG | + | chr3_3:53169381-53169400 | None:intergenic | 40.0% | |
| CACCTATTCCATTGGAATCA+AGG | - | chr3_3:53169421-53169440 | Msa0458020:CDS | 40.0% | |
| AACAGCCAAAGACAAAACTG+GGG | + | chr3_3:53169544-53169563 | None:intergenic | 40.0% | |
| GAACAGCCAAAGACAAAACT+GGG | + | chr3_3:53169545-53169564 | None:intergenic | 40.0% | |
| ATCTTCATCCACAGAAGTGA+CGG | + | chr3_3:53169568-53169587 | None:intergenic | 40.0% | |
| TGTGGATGAAGATTTGAGTC+TGG | - | chr3_3:53169575-53169594 | Msa0458020:CDS | 40.0% | |
| GTGGATGAAGATTTGAGTCT+GGG | - | chr3_3:53169576-53169595 | Msa0458020:CDS | 40.0% | |
| AGTCTGGGCAAAAGAGTTAT+AGG | - | chr3_3:53169591-53169610 | Msa0458020:CDS | 40.0% | |
| AGAGTTATAGGTGGAAAGTC+TGG | - | chr3_3:53169603-53169622 | Msa0458020:CDS | 40.0% | |
| !!! | TATCTGCACACTTTTAAGGC+TGG | + | chr3_3:53169652-53169671 | None:intergenic | 40.0% |
| AAAAGCCCTAAGACTCACAT+TGG | - | chr3_3:53169816-53169835 | Msa0458020:five_prime_UTR | 40.0% | |
| CTTTGCCAATGTGAGTCTTA+GGG | + | chr3_3:53169824-53169843 | None:intergenic | 40.0% | |
| CATCCAAACTCGTTCCAAAA+AGG | - | chr3_3:53169872-53169891 | Msa0458020:five_prime_UTR | 40.0% | |
| ATGCCTCATAGCAGCATTTC+AGG | - | chr3_3:53167369-53167388 | Msa0458020:three_prime_UTR | 45.0% | |
| GATCCTGAAATGCTGCTATG+AGG | + | chr3_3:53167375-53167394 | Msa0458010:intron | 45.0% | |
| TCAATGACCACATCGACCTT+GGG | + | chr3_3:53167408-53167427 | Msa0458010:intron | 45.0% | |
| GTCGATGTGGTCATTGACAT+GGG | - | chr3_3:53167411-53167430 | Msa0458020:three_prime_UTR | 45.0% | |
| TCAACAGTGAGGTTGAGAAG+TGG | + | chr3_3:53167441-53167460 | Msa0458010:intron | 45.0% | |
| CTTCTCAACCTCACTGTTGA+TGG | - | chr3_3:53167441-53167460 | Msa0458020:three_prime_UTR | 45.0% | |
| !!! | TTTTTCAGGTTGCAGCCACA+AGG | - | chr3_3:53167561-53167580 | Msa0458020:three_prime_UTR | 45.0% |
| !!! | TTTTCAGGTTGCAGCCACAA+GGG | - | chr3_3:53167562-53167581 | Msa0458020:three_prime_UTR | 45.0% |
| TCACTACTTGAGACACTTCC+TGG | + | chr3_3:53167794-53167813 | Msa0458010:intron | 45.0% | |
| GACAGGAAAGCCCCTAAATT+CGG | - | chr3_3:53168024-53168043 | Msa0458020:three_prime_UTR | 45.0% | |
| TAGCTCCTGTAAGCGTAGAA+AGG | + | chr3_3:53168434-53168453 | None:intergenic | 45.0% | |
| TGAGAGAATTACCCAGTCTC+TGG | + | chr3_3:53168508-53168527 | None:intergenic | 45.0% | |
| GATTCTTACCGTTGTTCCCT+TGG | - | chr3_3:53168773-53168792 | Msa0458020:intron | 45.0% | |
| !! | TGTAGTAGGTGCCATTACAG+GGG | - | chr3_3:53168885-53168904 | Msa0458020:intron | 45.0% |
| CTGCAGCATTCATAAATGGC+TGG | - | chr3_3:53168923-53168942 | Msa0458020:intron | 45.0% | |
| ! | GTGCAACCCCTTTTCAAACA+TGG | + | chr3_3:53168988-53169007 | None:intergenic | 45.0% |
| AAAGAAACCTGGGCATGAAC+AGG | - | chr3_3:53169132-53169151 | Msa0458020:intron | 45.0% | |
| TTGAAAACCTGTTCATGCCC+AGG | + | chr3_3:53169142-53169161 | None:intergenic | 45.0% | |
| GCAAGATGCACCTATTCCAT+TGG | - | chr3_3:53169413-53169432 | Msa0458020:CDS | 45.0% | |
| GGCCTTGATTCCAATGGAAT+AGG | + | chr3_3:53169426-53169445 | None:intergenic | 45.0% | |
| ACTATAGGTAGAGGCTGAGA+GGG | + | chr3_3:53169447-53169466 | None:intergenic | 45.0% | |
| AACTATAGGTAGAGGCTGAG+AGG | + | chr3_3:53169448-53169467 | None:intergenic | 45.0% | |
| GCAAATGTTGGACTCTGTCT+CGG | - | chr3_3:53169476-53169495 | Msa0458020:intron | 45.0% | |
| CAAATGTTGGACTCTGTCTC+GGG | - | chr3_3:53169477-53169496 | Msa0458020:intron | 45.0% | |
| AAATGTTGGACTCTGTCTCG+GGG | - | chr3_3:53169478-53169497 | Msa0458020:intron | 45.0% | |
| ! | GTGATCCAAGTTTGGTGGTT+CGG | - | chr3_3:53169508-53169527 | Msa0458020:intron | 45.0% |
| !! | TAGCACCCCAGTTTTGTCTT+TGG | - | chr3_3:53169536-53169555 | Msa0458020:intron | 45.0% |
| GGAACAGCCAAAGACAAAAC+TGG | + | chr3_3:53169546-53169565 | None:intergenic | 45.0% | |
| TCTTCATCCACAGAAGTGAC+GGG | + | chr3_3:53169567-53169586 | None:intergenic | 45.0% | |
| CTGGGCAAAAGAGTTATAGG+TGG | - | chr3_3:53169594-53169613 | Msa0458020:CDS | 45.0% | |
| ATAGCATCTAACACCAAGCC+TGG | - | chr3_3:53169774-53169793 | Msa0458020:five_prime_UTR | 45.0% | |
| ! | TGCTTCTTAGTCTTCCTACC+AGG | + | chr3_3:53169795-53169814 | None:intergenic | 45.0% |
| CCTTTGCCAATGTGAGTCTT+AGG | + | chr3_3:53169825-53169844 | None:intergenic | 45.0% | |
| CCTAAGACTCACATTGGCAA+AGG | - | chr3_3:53169822-53169841 | Msa0458020:five_prime_UTR | 45.0% | |
| ! | CACATTGGCAAAGGTTCTGA+TGG | - | chr3_3:53169831-53169850 | Msa0458020:five_prime_UTR | 45.0% |
| !!! | CACCCTTTTTGGAACGAGTT+TGG | + | chr3_3:53169878-53169897 | None:intergenic | 45.0% |
| !! | AAAAATAAAAAATAAAAAGT+TGG | + | chr3_3:53167543-53167562 | Msa0458010:intron | 5.0% |
| !!! | TTTATTTTTTATTTTTTTTC+AGG | - | chr3_3:53167547-53167566 | Msa0458020:three_prime_UTR | 5.0% |
| !!! | ATAATAATATATATTGATTT+TGG | + | chr3_3:53167704-53167723 | Msa0458010:intron | 5.0% |
| !! | ATATATAAATTACTTATAAT+TGG | + | chr3_3:53167934-53167953 | Msa0458010:intron | 5.0% |
| !! | ATTATAAGTAATTTATATAT+TGG | - | chr3_3:53167934-53167953 | Msa0458020:three_prime_UTR | 5.0% |
| AGGATCAGTGTCTTCTCCCA+AGG | - | chr3_3:53167389-53167408 | Msa0458020:three_prime_UTR | 50.0% | |
| GTCAATGACCACATCGACCT+TGG | + | chr3_3:53167409-53167428 | Msa0458010:intron | 50.0% | |
| GGTCGATGTGGTCATTGACA+TGG | - | chr3_3:53167410-53167429 | Msa0458020:three_prime_UTR | 50.0% | |
| ! | ATGGGATTCCTGCCCTTTTC+AGG | + | chr3_3:53168241-53168260 | None:intergenic | 50.0% |
| ACGCTTACAGGAGCTATAGC+TGG | - | chr3_3:53168438-53168457 | Msa0458020:intron | 50.0% | |
| TGTTGGAACAGAATACGGGG+TGG | - | chr3_3:53168467-53168486 | Msa0458020:intron | 50.0% | |
| TGTCACTGCACCTCCAAATG+TGG | + | chr3_3:53168821-53168840 | None:intergenic | 50.0% | |
| ! | ACATTTGGAGGTGCAGTGAC+AGG | - | chr3_3:53168820-53168839 | Msa0458020:intron | 50.0% |
| ! | CATTTGGAGGTGCAGTGACA+GGG | - | chr3_3:53168821-53168840 | Msa0458020:intron | 50.0% |
| ! | ATTTGGAGGTGCAGTGACAG+GGG | - | chr3_3:53168822-53168841 | Msa0458020:intron | 50.0% |
| GATGAAGGGGACGTGTTGTA+AGG | - | chr3_3:53169233-53169252 | Msa0458020:intron | 50.0% | |
| AAGGGGACGTGTTGTAAGGT+AGG | - | chr3_3:53169237-53169256 | Msa0458020:intron | 50.0% | |
| TGAGAGGGCCTTGATTCCAA+TGG | + | chr3_3:53169432-53169451 | None:intergenic | 50.0% | |
| GAACACCGAACCACCAAACT+TGG | + | chr3_3:53169516-53169535 | None:intergenic | 50.0% | |
| !!! | TTTTAAGGCTGGCTGCTGAG+TGG | + | chr3_3:53169641-53169660 | None:intergenic | 50.0% |
| CATCTAACACCAAGCCTGGT+AGG | - | chr3_3:53169778-53169797 | Msa0458020:five_prime_UTR | 50.0% | |
| ! | CTTAGTCTTCCTACCAGGCT+TGG | + | chr3_3:53169790-53169809 | None:intergenic | 50.0% |
| GTCTTCTCCCAAGGTCGATG+TGG | - | chr3_3:53167398-53167417 | Msa0458020:three_prime_UTR | 55.0% | |
| ATCCTCTGCAAGTGCCCTTG+TGG | + | chr3_3:53167579-53167598 | Msa0458010:intron | 55.0% | |
| GAACAGAATACGGGGTGGAG+AGG | - | chr3_3:53168472-53168491 | Msa0458020:intron | 55.0% | |
| ! | TTACCCAGTCTCTGGTGCCA+CGG | + | chr3_3:53168500-53168519 | None:intergenic | 55.0% |
| CGCAATTGCAGCCCCTGTAA+TGG | + | chr3_3:53168899-53168918 | None:intergenic | 55.0% | |
| GAGGATGCTTGCTTAGAGCC+AGG | - | chr3_3:53169384-53169403 | Msa0458020:intron | 55.0% | |
| ! | GGTGCATCTTGCTCTAGACC+TGG | + | chr3_3:53169405-53169424 | None:intergenic | 55.0% |
| ! | GAGGGGGTGTGATCCAAGTT+TGG | - | chr3_3:53169500-53169519 | Msa0458020:intron | 55.0% |
| GGGGTGTGATCCAAGTTTGG+TGG | - | chr3_3:53169503-53169522 | Msa0458020:intron | 55.0% | |
| !! | AGCCACAAGGGCACTTGCAG+AGG | - | chr3_3:53167574-53167593 | Msa0458020:three_prime_UTR | 60.0% |
| GATCCGTGGCACCAGAGACT+GGG | - | chr3_3:53168494-53168513 | Msa0458020:intron | 60.0% | |
| TGTTGGACTCTGTCTCGGGG+AGG | - | chr3_3:53169481-53169500 | Msa0458020:intron | 60.0% | |
| GTTGGACTCTGTCTCGGGGA+GGG | - | chr3_3:53169482-53169501 | Msa0458020:intron | 60.0% | |
| TTGGACTCTGTCTCGGGGAG+GGG | - | chr3_3:53169483-53169502 | Msa0458020:intron | 60.0% | |
| GGCTGTTCCCGTCACTTCTG+TGG | - | chr3_3:53169557-53169576 | Msa0458020:CDS | 60.0% | |
| GCTGGCTGCTGAGTGGTTAC+TGG | + | chr3_3:53169634-53169653 | None:intergenic | 60.0% | |
| TACGGGGTGGAGAGGATCCG+TGG | - | chr3_3:53168480-53168499 | Msa0458020:intron | 65.0% | |
| GGATCCGTGGCACCAGAGAC+TGG | - | chr3_3:53168493-53168512 | Msa0458020:intron | 65.0% | |
| AGGTGCAGTGACAGGGGCTC+TGG | - | chr3_3:53168828-53168847 | Msa0458020:intron | 65.0% | |
| TGGACTCTGTCTCGGGGAGG+GGG | - | chr3_3:53169484-53169503 | Msa0458020:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 53167122 | 53169902 | 53167122 | ID=Msa0458020;Name=Msa0458020 |
| chr3_3 | mRNA | 53167122 | 53169902 | 53167122 | ID=Msa0458020-mRNA-1;Parent=Msa0458020;Name=Msa0458020-mRNA-1;_AED=0.15;_eAED=0.15;_QI=227|1|1|1|0.83|0.71|7|948|147 |
| chr3_3 | exon | 53167122 | 53168213 | 53167122 | ID=Msa0458020-mRNA-1:exon:10354;Parent=Msa0458020-mRNA-1 |
| chr3_3 | exon | 53168509 | 53168576 | 53168509 | ID=Msa0458020-mRNA-1:exon:10353;Parent=Msa0458020-mRNA-1 |
| chr3_3 | exon | 53168667 | 53168700 | 53168667 | ID=Msa0458020-mRNA-1:exon:10352;Parent=Msa0458020-mRNA-1 |
| chr3_3 | exon | 53169198 | 53169229 | 53169198 | ID=Msa0458020-mRNA-1:exon:10351;Parent=Msa0458020-mRNA-1 |
| chr3_3 | exon | 53169404 | 53169455 | 53169404 | ID=Msa0458020-mRNA-1:exon:10350;Parent=Msa0458020-mRNA-1 |
| chr3_3 | exon | 53169542 | 53169737 | 53169542 | ID=Msa0458020-mRNA-1:exon:10349;Parent=Msa0458020-mRNA-1 |
| chr3_3 | exon | 53169758 | 53169902 | 53169758 | ID=Msa0458020-mRNA-1:exon:10348;Parent=Msa0458020-mRNA-1 |
| chr3_3 | five_prime_UTR | 53169758 | 53169902 | 53169758 | ID=Msa0458020-mRNA-1:five_prime_utr;Parent=Msa0458020-mRNA-1 |
| chr3_3 | five_prime_UTR | 53169656 | 53169737 | 53169656 | ID=Msa0458020-mRNA-1:five_prime_utr;Parent=Msa0458020-mRNA-1 |
| chr3_3 | CDS | 53169542 | 53169655 | 53169542 | ID=Msa0458020-mRNA-1:cds;Parent=Msa0458020-mRNA-1 |
| chr3_3 | CDS | 53169404 | 53169455 | 53169404 | ID=Msa0458020-mRNA-1:cds;Parent=Msa0458020-mRNA-1 |
| chr3_3 | CDS | 53169198 | 53169229 | 53169198 | ID=Msa0458020-mRNA-1:cds;Parent=Msa0458020-mRNA-1 |
| chr3_3 | CDS | 53168667 | 53168700 | 53168667 | ID=Msa0458020-mRNA-1:cds;Parent=Msa0458020-mRNA-1 |
| chr3_3 | CDS | 53168509 | 53168576 | 53168509 | ID=Msa0458020-mRNA-1:cds;Parent=Msa0458020-mRNA-1 |
| chr3_3 | CDS | 53168070 | 53168213 | 53168070 | ID=Msa0458020-mRNA-1:cds;Parent=Msa0458020-mRNA-1 |
| chr3_3 | three_prime_UTR | 53167122 | 53168069 | 53167122 | ID=Msa0458020-mRNA-1:three_prime_utr;Parent=Msa0458020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
