AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0057260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0057260 MtrunA17_Chr1g0147311 86.769 325 40 2 335 656 31 355 0.0 578
Msa0057260 MtrunA17_Chr1g0147311 71.978 182 13 1 204 347 173 354 2.63e-75 245
Msa0057260 MtrunA17_Chr1g0147311 78.808 151 22 1 2 142 192 342 1.45e-73 241
Msa0057260 MtrunA17_Chr1g0147311 80.645 62 10 1 142 203 40 99 7.66e-26 109
Msa0057260 MtrunA17_Chr1g0147301 85.263 285 40 2 373 656 1 284 5.28e-174 496
Msa0057260 MtrunA17_Chr1g0147301 72.527 182 12 1 204 347 102 283 9.59e-77 246
Msa0057260 MtrunA17_Chr1g0147301 78.146 151 23 1 2 142 121 271 2.46e-74 240
Msa0057260 MtrunA17_Chr1g0147291 85.448 268 34 2 390 656 3 266 4.20e-163 468
Msa0057260 MtrunA17_Chr1g0147291 71.429 182 14 1 204 347 84 265 3.48e-76 244
Msa0057260 MtrunA17_Chr1g0147291 78.146 151 23 1 2 142 103 253 2.85e-74 239
Msa0057260 MtrunA17_Chr1g0146631 69.018 326 89 6 335 655 5 323 1.79e-153 446
Msa0057260 MtrunA17_Chr1g0146631 47.097 310 60 3 142 347 14 323 1.05e-78 253
Msa0057260 MtrunA17_Chr1g0146631 79.333 150 22 1 2 142 162 311 2.96e-74 241
Msa0057260 MtrunA17_Chr1g0147331 70.245 326 85 6 335 655 5 323 1.73e-150 438
Msa0057260 MtrunA17_Chr1g0147331 48.387 310 56 3 142 347 14 323 3.62e-79 254
Msa0057260 MtrunA17_Chr1g0147331 79.333 150 22 1 2 142 162 311 3.22e-74 241
Msa0057260 MtrunA17_Chr1g0147321 88.158 228 23 1 429 656 14 237 3.14e-143 417
Msa0057260 MtrunA17_Chr1g0147321 71.667 180 13 1 204 345 55 234 2.26e-76 244
Msa0057260 MtrunA17_Chr1g0147321 77.483 151 24 1 2 142 74 224 4.82e-74 238
Msa0057260 MtrunA17_Chr1g0147271 59.043 376 80 6 347 656 17 384 3.36e-139 412
Msa0057260 MtrunA17_Chr1g0147271 90.132 152 5 1 1 142 220 371 3.55e-85 272
Msa0057260 MtrunA17_Chr1g0147271 61.538 182 32 1 204 347 202 383 2.86e-62 212
Msa0057260 MtrunA17_Chr1g0147271 52.500 80 27 4 126 204 4 73 2.99e-12 68.9
Msa0057260 MtrunA17_Chr1g0147261 58.333 324 108 8 333 656 3 299 2.33e-122 365
Msa0057260 MtrunA17_Chr1g0147261 70.667 150 34 2 2 142 138 286 1.53e-63 212
Msa0057260 MtrunA17_Chr1g0147261 44.366 284 77 5 142 345 14 296 3.26e-63 211
Msa0057260 MtrunA17_Chr1g0147241 60.984 305 106 7 352 656 21 312 2.71e-120 360
Msa0057260 MtrunA17_Chr1g0147241 74.667 150 28 2 2 142 151 299 2.40e-67 223
Msa0057260 MtrunA17_Chr1g0147241 56.425 179 42 1 203 345 131 309 4.91e-54 187
Msa0057260 MtrunA17_Chr3g0139431 50.915 328 143 9 333 655 6 320 2.35e-107 327
Msa0057260 MtrunA17_Chr3g0139431 59.211 152 49 3 2 140 155 306 1.18e-52 184
Msa0057260 MtrunA17_Chr3g0139431 45.405 185 60 2 204 347 136 320 8.35e-42 154
Msa0057260 MtrunA17_Chr3g0139431 51.220 82 28 5 130 209 9 80 3.16e-13 71.2
Msa0057260 MtrunA17_Chr1g0147251 64.017 239 77 4 418 656 13 242 4.91e-103 313
Msa0057260 MtrunA17_Chr1g0147251 66.000 150 41 2 2 142 81 229 4.08e-58 196
Msa0057260 MtrunA17_Chr1g0147251 49.741 193 59 2 189 345 49 239 7.63e-51 176
Msa0057260 MtrunA17_Chr4g0034821 42.342 222 122 5 438 655 71 290 4.49e-50 176
Msa0057260 MtrunA17_Chr4g0034821 44.737 152 71 4 1 139 124 275 4.21e-31 123
Msa0057260 MtrunA17_Chr4g0034821 33.333 183 81 3 206 347 108 290 3.05e-22 97.8
Msa0057260 MtrunA17_Chr3g0144421 41.176 221 123 5 439 655 84 301 2.25e-47 169
Msa0057260 MtrunA17_Chr3g0144421 37.349 166 86 5 1 154 136 295 2.65e-27 112
Msa0057260 MtrunA17_Chr3g0144421 30.481 187 90 2 206 352 120 306 2.77e-21 95.1
Msa0057260 MtrunA17_Chr3g0144451 41.441 222 124 5 438 655 55 274 4.46e-47 167
Msa0057260 MtrunA17_Chr3g0144451 44.737 152 71 3 1 139 108 259 6.47e-32 125
Msa0057260 MtrunA17_Chr3g0144451 32.240 183 83 2 206 347 92 274 2.11e-21 95.1
Msa0057260 MtrunA17_Chr3g0138231 40.991 222 125 4 438 655 46 265 6.14e-47 167
Msa0057260 MtrunA17_Chr3g0138231 46.053 152 69 4 1 139 99 250 2.15e-32 126
Msa0057260 MtrunA17_Chr3g0138231 31.694 183 84 1 206 347 83 265 3.32e-22 97.1
Msa0057260 MtrunA17_Chr4g0034451 38.182 220 125 6 442 655 311 525 3.19e-40 154
Msa0057260 MtrunA17_Chr4g0034451 33.553 152 87 4 1 138 357 508 1.82e-21 98.6
Msa0057260 MtrunA17_Chr3g0144411 38.914 221 120 6 442 655 325 537 6.59e-40 154
Msa0057260 MtrunA17_Chr3g0144411 37.419 155 84 3 1 142 371 525 2.01e-23 104
Msa0057260 MtrunA17_Chr3g0144411 31.282 195 88 4 204 357 353 542 3.59e-19 91.7
Msa0057260 MtrunA17_Chr3g0144391 38.182 220 123 6 442 655 292 504 3.77e-39 151
Msa0057260 MtrunA17_Chr3g0144391 37.419 155 84 4 1 142 338 492 2.87e-23 103
Msa0057260 MtrunA17_Chr4g0034731 36.522 230 131 7 434 655 209 431 2.90e-37 144
Msa0057260 MtrunA17_Chr4g0034731 34.211 152 86 4 1 138 263 414 2.47e-21 97.4
Msa0057260 MtrunA17_Chr4g0034731 30.481 187 87 4 204 347 245 431 2.49e-18 88.2
Msa0057260 MtrunA17_Chr8g0355861 32.333 300 135 11 359 657 29 261 1.21e-36 138
Msa0057260 MtrunA17_Chr8g0355861 41.727 139 72 3 19 151 121 256 8.21e-28 113
Msa0057260 MtrunA17_Chr8g0355321 31.024 332 177 14 344 657 6 303 7.14e-36 137
Msa0057260 MtrunA17_Chr8g0355321 42.537 134 67 4 28 154 172 302 1.66e-25 107
Msa0057260 MtrunA17_Chr8g0355311 45.205 146 73 4 512 657 53 191 1.31e-34 130
Msa0057260 MtrunA17_Chr8g0355311 42.553 141 71 4 21 154 53 190 1.44e-28 113
Msa0057260 MtrunA17_Chr4g0034691 37.387 222 124 7 442 655 493 707 1.36e-34 140
Msa0057260 MtrunA17_Chr4g0034691 34.211 152 86 4 1 138 539 690 9.61e-20 94.0
Msa0057260 MtrunA17_Chr4g0034721 36.818 220 128 6 442 655 361 575 3.19e-34 137
Msa0057260 MtrunA17_Chr4g0034721 33.553 152 87 3 1 138 407 558 3.99e-20 94.7
Msa0057260 MtrunA17_Chr8g0365361 35.000 220 132 5 442 656 181 394 1.06e-33 133
Msa0057260 MtrunA17_Chr8g0365361 38.158 152 81 4 1 140 229 379 2.24e-23 102
Msa0057260 MtrunA17_Chr8g0365361 30.387 181 87 3 209 350 216 396 7.70e-17 83.2
Msa0057260 MtrunA17_Chr2g0318901 29.618 314 147 12 347 657 18 260 3.87e-33 128
Msa0057260 MtrunA17_Chr2g0318901 40.000 135 71 4 27 154 128 259 2.42e-23 100
Msa0057260 MtrunA17_Chr2g0318901 25.287 261 144 7 142 353 15 273 1.09e-16 80.9
Msa0057260 MtrunA17_Chr1g0168781 30.990 313 145 13 347 657 17 260 1.56e-31 124
Msa0057260 MtrunA17_Chr1g0168781 37.500 144 79 6 21 156 121 261 1.02e-19 89.7
Msa0057260 MtrunA17_Chr2g0318931 28.869 336 166 12 326 657 5 271 6.83e-31 122
Msa0057260 MtrunA17_Chr2g0318931 40.187 107 56 2 28 128 138 242 8.88e-20 90.1
Msa0057260 MtrunA17_Chr8g0355331 43.165 139 72 4 519 657 291 422 8.07e-31 125
Msa0057260 MtrunA17_Chr8g0355331 38.776 147 80 4 15 154 278 421 1.89e-25 109
Msa0057260 MtrunA17_Chr8g0355331 27.686 242 114 7 147 350 205 423 2.33e-15 79.0
Msa0057260 MtrunA17_Chr3g0117791 35.567 194 112 4 470 656 439 626 2.73e-30 126
Msa0057260 MtrunA17_Chr3g0117791 36.667 150 84 4 2 140 462 611 4.44e-21 97.8
Msa0057260 MtrunA17_Chr3g0117791 28.333 180 90 3 205 345 444 623 1.36e-13 73.9
Msa0057260 MtrunA17_Chr8g0355841 40.476 168 84 5 499 657 350 510 3.97e-30 125
Msa0057260 MtrunA17_Chr8g0355841 40.288 139 77 3 21 154 372 509 1.58e-23 104
Msa0057260 MtrunA17_Chr8g0355841 28.704 216 109 5 176 347 294 508 7.20e-15 77.8
Msa0057260 MtrunA17_Chr8g0365401 34.896 192 116 4 470 656 438 625 7.07e-30 125
Msa0057260 MtrunA17_Chr8g0365401 36.184 152 84 4 1 140 460 610 8.94e-22 100
Msa0057260 MtrunA17_Chr8g0365401 24.583 240 118 6 153 350 409 627 2.58e-13 73.2
Msa0057260 MtrunA17_Chr8g0355871 35.484 217 113 8 441 655 30 221 8.04e-30 118
Msa0057260 MtrunA17_Chr8g0355871 41.045 134 69 4 28 154 92 222 2.97e-23 99.0
Msa0057260 MtrunA17_Chr5g0413591 31.507 219 139 5 442 655 415 627 1.65e-29 124
Msa0057260 MtrunA17_Chr5g0413591 34.437 151 88 4 1 140 463 613 1.71e-21 99.4
Msa0057260 MtrunA17_Chr8g0365381 35.079 191 117 4 470 656 455 642 2.78e-29 123
Msa0057260 MtrunA17_Chr8g0365381 35.099 151 87 4 1 140 477 627 1.34e-20 96.3
Msa0057260 MtrunA17_Chr8g0365381 26.872 227 103 8 153 337 426 631 1.26e-11 67.8
Msa0057260 MtrunA17_Chr2g0318871 28.025 314 152 11 347 657 18 260 2.86e-29 117
Msa0057260 MtrunA17_Chr2g0318871 36.296 135 76 4 27 154 128 259 6.36e-20 90.5
Msa0057260 MtrunA17_Chr2g0318871 26.812 276 149 10 128 353 1 273 2.29e-16 79.7
Msa0057260 MtrunA17_Chr8g0355831 28.955 335 192 12 359 657 28 352 2.47e-28 117
Msa0057260 MtrunA17_Chr8g0355831 39.860 143 76 4 19 154 212 351 8.20e-23 100
Msa0057260 MtrunA17_Chr6g0485051 34.010 197 114 7 470 655 13 204 1.09e-27 111
Msa0057260 MtrunA17_Chr6g0485051 32.450 151 87 5 1 136 35 185 9.57e-18 82.4
Msa0057260 MtrunA17_Chr1g0147231 59.000 100 37 3 411 509 34 130 7.34e-25 100
Msa0057260 MtrunA17_Chr4g0076231 33.121 157 97 3 503 654 3 156 1.24e-24 100
Msa0057260 MtrunA17_Chr4g0076231 34.043 141 81 2 12 140 3 143 1.34e-21 92.0
Msa0057260 MtrunA17_Chr5g0412991 25.063 395 217 10 2 344 39 406 5.82e-24 105
Msa0057260 MtrunA17_Chr5g0412991 28.378 222 150 5 440 657 195 411 7.54e-22 98.6
Msa0057260 MtrunA17_Chr5g0412991 28.342 187 127 4 456 638 1 184 2.03e-15 79.0
Msa0057260 MtrunA17_Chr5g0412981 25.063 395 217 10 2 344 39 406 1.26e-23 103
Msa0057260 MtrunA17_Chr5g0412981 28.378 222 150 5 440 657 195 411 7.97e-22 98.6
Msa0057260 MtrunA17_Chr5g0412981 27.807 187 128 4 456 638 1 184 1.22e-14 76.6
Msa0057260 MtrunA17_Chr5g0412951 27.670 206 142 4 456 657 8 210 2.32e-19 87.0
Msa0057260 MtrunA17_Chr5g0412951 30.872 149 93 3 2 140 46 194 3.70e-14 72.0
Msa0057260 MtrunA17_Chr1g0147281 74.468 47 12 0 142 188 14 60 4.78e-18 79.3
Msa0057260 MtrunA17_Chr1g0147281 67.391 46 15 0 337 382 7 52 1.67e-15 72.0
Msa0057260 MtrunA17_Chr8g0371951 41.772 79 42 2 570 645 10 87 3.90e-15 71.2
Msa0057260 MtrunA17_Chr8g0371951 40.000 75 41 2 69 140 10 83 1.29e-14 69.7
Msa0057260 MtrunA17_Chr4g0034051 42.105 76 41 3 583 655 3 78 2.14e-13 66.2
Msa0057260 MtrunA17_Chr5g0413021 28.571 133 89 3 528 657 1 130 3.36e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0057260 AT5G25610.1 54.202 238 104 4 423 656 155 391 7.60e-82 264
Msa0057260 AT5G25610.1 58.170 153 51 3 2 142 227 378 4.56e-49 176
Msa0057260 AT5G25610.1 43.455 191 68 4 194 345 199 388 5.24e-39 149
Msa0057260 AT1G49320.1 37.607 234 129 7 435 656 51 279 4.38e-40 148
Msa0057260 AT1G49320.1 35.220 159 85 5 2 142 108 266 2.72e-22 97.8
Msa0057260 AT1G49320.1 29.787 188 86 3 206 347 91 278 1.59e-19 89.7
Msa0057260 AT1G60390.1 34.715 193 111 4 470 654 435 620 6.40e-30 125
Msa0057260 AT1G60390.1 36.129 155 84 4 1 142 457 609 4.18e-22 101
Msa0057260 AT1G70370.2 34.737 190 117 3 470 655 437 623 8.70e-28 119
Msa0057260 AT1G70370.2 35.099 151 87 3 1 140 459 609 8.91e-21 97.4
Msa0057260 AT1G70370.1 34.737 190 117 3 470 655 437 623 8.70e-28 119
Msa0057260 AT1G70370.1 35.099 151 87 3 1 140 459 609 8.91e-21 97.4
Msa0057260 AT1G23760.1 32.105 190 122 3 470 655 433 619 1.46e-24 109
Msa0057260 AT1G23760.1 33.987 153 86 4 1 140 455 605 2.06e-18 89.7

Find 116 sgRNAs with CRISPR-Local

Find 821 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTACCACCTCAACTTTAC+TGG 0.237355 1_2:-13213937 Msa0057260:CDS
TCATGAAAAGCATAATATTT+AGG 0.243591 1_2:+13221426 None:intergenic
TTCTTCTGTTCCTTCTTTGA+TGG 0.265021 1_2:+13227697 None:intergenic
GGCAAAAGGTGTGAAGAAAT+TGG 0.273962 1_2:-13227492 Msa0057260:intron
TATTTCCACCTCAGTATTAC+TGG 0.282247 1_2:-13222974 Msa0057260:CDS
CCCACAGGATCATGTTGTTT+GGG 0.282262 1_2:-13212415 Msa0057260:CDS
TCCCACAGGATCATGTTGTT+TGG 0.287622 1_2:-13212416 Msa0057260:CDS
TGTAACATCATTGGAATCTA+TGG 0.289874 1_2:-13212784 Msa0057260:CDS
TGTAACATCATTGGAATCTA+TGG 0.289874 1_2:-13221730 Msa0057260:CDS
TTCCTTTGATCCTTCTTTGA+TGG 0.296396 1_2:+13212875 None:intergenic
TTCCTTTGATCCTTCTTTGA+TGG 0.296396 1_2:+13221821 None:intergenic
AGCAAAAGGAGTGAAGAAAT+TGG 0.297340 1_2:-13212670 Msa0057260:CDS
ACTTGAAAAGCCAAATGTTT+AGG 0.303666 1_2:+13227302 None:intergenic
TGTGACATCATTGGAATCTA+TGG 0.323363 1_2:-13227606 Msa0057260:CDS
TTCCAATTTGATTGATGAAA+AGG 0.335693 1_2:+13212917 None:intergenic
AGCAGATTAGTGATGGCTTT+TGG 0.347892 1_2:+13213887 None:intergenic
ATAAGTGAGTGTGAAGAAAA+TGG 0.348496 1_2:-13227653 Msa0057260:CDS
GTGCCTTTGGAAGGTGTTGA+TGG 0.355685 1_2:-13227377 Msa0057260:CDS
AGAAGATCAGTAATGGCTTT+TGG 0.358615 1_2:+13222924 None:intergenic
AAAGCTTTGTGTAACATCAT+TGG 0.359569 1_2:-13212793 Msa0057260:CDS
AAAGCTTTGTGTAACATCAT+TGG 0.359569 1_2:-13221739 Msa0057260:CDS
ACAATGGAATCCTAAACATT+TGG 0.370419 1_2:-13227312 Msa0057260:CDS
TAAAGTTTACTCTGTGCCTT+TGG 0.380290 1_2:-13227390 Msa0057260:CDS
TGACTCTCATTGAATACTAT+AGG 0.385181 1_2:+13213089 None:intergenic
GAAACAACTTCAAATAATAA+TGG 0.392965 1_2:-13212978 Msa0057260:CDS
CAACAATATGTTATAGCAAA+AGG 0.401264 1_2:-13212684 Msa0057260:CDS
AAAGCTTTGTGTGACATCAT+TGG 0.404983 1_2:-13227615 Msa0057260:CDS
TGTGGGAGGATGTGACAAAT+AGG 0.414162 1_2:+13221378 None:intergenic
TGTGGGAGGATGTGACAAAT+AGG 0.415624 1_2:+13212432 None:intergenic
GTTGCTCTGGAAGGTGTTGA+TGG 0.425946 1_2:-13212555 Msa0057260:CDS
GTGCCCTTGGAATGTGTTGA+TGG 0.426115 1_2:-13221501 Msa0057260:CDS
GCAAAAGGAGTGAAGAAATT+GGG 0.427177 1_2:-13212669 Msa0057260:CDS
TCCAATTTGATTGATGAAAA+GGG 0.437370 1_2:+13212918 None:intergenic
GCAAAAGGTGTGAAGAAATT+GGG 0.438714 1_2:-13227491 Msa0057260:intron
TCCAATTTGATTGATGAAAA+CGG 0.443565 1_2:+13221864 None:intergenic
CAAGTGCTCAATGTTCAACC+TGG 0.454270 1_2:-13227284 Msa0057260:CDS
TTTGATTGATGAAAAGGGTA+TGG 0.458037 1_2:+13212923 None:intergenic
GATTTCACTACTTCGAAACT+TGG 0.458312 1_2:-13227581 Msa0057260:CDS
TGAAGTTTACTCTGTGCCCT+TGG 0.470084 1_2:-13221514 Msa0057260:CDS
GTAGATGTTGGAGTCAGAAA+AGG 0.471539 1_2:-13222119 Msa0057260:CDS
TTAAATGTTGGAGCCAGAAA+AGG 0.472139 1_2:-13213170 Msa0057260:CDS
TCAAATGTAGGTTGTGCAAG+TGG 0.475421 1_2:-13213975 Msa0057260:intron
CATGAGCTTAAAGTTCAACC+TGG 0.481587 1_2:-13221408 Msa0057260:CDS
TGAAGTTTACTATGTTGCTC+TGG 0.488627 1_2:-13212568 Msa0057260:CDS
TTTGATTGATGAAAACGGTA+TGG 0.495426 1_2:+13221869 None:intergenic
GGATATGAAGGAGGTGGCAC+TGG 0.497361 1_2:-13213149 Msa0057260:CDS
CATTGGAGAGTTGGGAAGCA+TGG 0.499468 1_2:+13213910 None:intergenic
CATTGGAGAGTTGGGAAGCA+TGG 0.499468 1_2:+13222947 None:intergenic
ATTGGAGTAATGAGAAAGCA+AGG 0.504664 1_2:-13213211 Msa0057260:CDS
TAGATGTTGGAGTCAGAAAA+GGG 0.510160 1_2:-13222118 Msa0057260:intron
TAAAGAGAAAGCAACAATGA+TGG 0.512703 1_2:-13222159 Msa0057260:CDS
TTAAGTGAGTGTGAAGCAAA+TGG 0.512865 1_2:-13212831 Msa0057260:CDS
ATAAGTGAGTGTGAAGCAAA+TGG 0.512865 1_2:-13221777 Msa0057260:CDS
TGAAGCTGTTTCAACAGAAG+TGG 0.514087 1_2:-13212727 Msa0057260:CDS
TGAAGCTGTTTCAACAGAAG+TGG 0.514087 1_2:-13221673 Msa0057260:CDS
GTTTACTCTGTGCCTTTGGA+AGG 0.519063 1_2:-13227386 Msa0057260:CDS
TCAATTGCAGCTTGTGCTAG+TGG 0.525904 1_2:-13223012 Msa0057260:intron
CTGGAAGGTGTTGATGGAAG+TGG 0.526202 1_2:-13212549 Msa0057260:CDS
AGCAAGGGTGGTGTAGATGT+TGG 0.526950 1_2:-13222131 Msa0057260:CDS
TGTGAAGAAAATGGCATCAA+AGG 0.529052 1_2:-13227644 Msa0057260:CDS
ATGGAATTAGCAACTTCTCT+AGG 0.530201 1_2:+13212942 None:intergenic
TTCCATCAAAGAAGGATCAA+AGG 0.534638 1_2:-13212877 Msa0057260:CDS
TTCCATCAAAGAAGGATCAA+AGG 0.534638 1_2:-13221823 Msa0057260:CDS
AACATGTTCTCCATCAAAGA+AGG 0.536136 1_2:-13227707 Msa0057260:CDS
AACAATGATGGATGTAAGCA+AGG 0.541571 1_2:-13222147 Msa0057260:CDS
TGACAAACTGGAACAGTCCC+AGG 0.541759 1_2:+13227266 None:intergenic
GATTTCACTATTTCAAAACT+CGG 0.543592 1_2:-13221705 Msa0057260:CDS
GATTTCACTATTTCGAAACT+CGG 0.550412 1_2:-13212759 Msa0057260:CDS
GGAGCCAGAAAAGGATATGA+AGG 0.551141 1_2:-13213161 Msa0057260:CDS
GTTTCCATCAACACATTCCA+AGG 0.551219 1_2:+13221497 None:intergenic
CAATTGCAGCTTGTGCTAGT+GGG 0.557438 1_2:-13223011 Msa0057260:intron
CAAATGTAGGTTGTGCAAGT+GGG 0.560364 1_2:-13213974 Msa0057260:intron
AGCAATGGTGGTTTAAATGT+TGG 0.561265 1_2:-13213182 Msa0057260:CDS
GTTTACTATGTTGCTCTGGA+AGG 0.562547 1_2:-13212564 Msa0057260:CDS
ACACAACAACAGCTTTAACT+CGG 0.579233 1_2:+13227351 None:intergenic
TATTTGTCACATCCTCCCAC+AGG 0.593098 1_2:-13212430 Msa0057260:CDS
TATTTGTCACATCCTCCCAC+AGG 0.593098 1_2:-13221376 Msa0057260:CDS
TGTGAAGCAAATGGCATCAA+AGG 0.593813 1_2:-13212822 Msa0057260:CDS
TGTGAAGCAAATGGCATCAA+AGG 0.593813 1_2:-13221768 Msa0057260:CDS
TGACAAATAGGAACAATCCC+TGG 0.598102 1_2:+13212444 None:intergenic
GACTTCCAGTAAAGTTGAGG+TGG 0.598732 1_2:+13213932 None:intergenic
AGAAAAGGATATGAAGGAGG+TGG 0.598751 1_2:-13213155 Msa0057260:CDS
ACCCAAACAACATGATCCTG+TGG 0.601894 1_2:+13212414 None:intergenic
ACCCAAACAACATGATCCTG+TGG 0.601894 1_2:+13221360 None:intergenic
GTCACGCTGATACATCAGAA+TGG 0.604802 1_2:-13221452 Msa0057260:CDS
AAGTGCTCAATGTTCAACCT+GGG 0.607659 1_2:-13227283 Msa0057260:CDS
ATGAGCTTAAAGTTCAACCT+GGG 0.610401 1_2:-13221407 Msa0057260:CDS
GCAAGGGATGTAAGCAATGG+TGG 0.617515 1_2:-13213194 Msa0057260:CDS
TATGTGCTTAAAGTTCAACC+AGG 0.617822 1_2:-13212462 Msa0057260:CDS
GACTTCCAGTAATACTGAGG+TGG 0.619692 1_2:+13222969 None:intergenic
ATGGACTTCCAGTAAAGTTG+AGG 0.622928 1_2:+13213929 None:intergenic
AGGGTGTAGCAGATTAGTGA+TGG 0.623388 1_2:+13213880 None:intergenic
AAATGTAGGTTGTGCAAGTG+GGG 0.625115 1_2:-13213973 Msa0057260:intron
CTTCCATCAACACCTTCCAA+AGG 0.627468 1_2:+13227374 None:intergenic
ACAATGATGGATGTAAGCAA+GGG 0.630059 1_2:-13222146 Msa0057260:CDS
TTGGAGTAATGAGAAAGCAA+GGG 0.633614 1_2:-13213210 Msa0057260:CDS
AGGGTGTAGAAGATCAGTAA+TGG 0.639550 1_2:+13222917 None:intergenic
AGCAAATGGCATCAAAGGTG+AGG 0.640005 1_2:-13212817 Msa0057260:CDS
AGCAAATGGCATCAAAGGTG+AGG 0.640005 1_2:-13221763 Msa0057260:CDS
AGAAAATGGCATCAAAGGAG+AGG 0.642414 1_2:-13227639 Msa0057260:CDS
CCCAAACAACATGATCCTGT+GGG 0.646890 1_2:+13212415 None:intergenic
CCCAAACAACATGATCCTGT+GGG 0.646890 1_2:+13221361 None:intergenic
GGAATGTGTTGATGGAAACA+TGG 0.651839 1_2:-13221493 Msa0057260:CDS
TTTCCATCAACACATTCCAA+GGG 0.652000 1_2:+13221498 None:intergenic
TGACAAATAGGAATAGTCCC+AGG 0.653522 1_2:+13221390 None:intergenic
ATGTGCTTAAAGTTCAACCA+GGG 0.653709 1_2:-13212461 Msa0057260:CDS
ATCACTAATCTGCTACACCC+TGG 0.660224 1_2:-13213878 Msa0057260:intron
AAAGCAAGGGATGTAAGCAA+TGG 0.661413 1_2:-13213197 Msa0057260:CDS
GCCAGAAAAGGATATGAAGG+AGG 0.668594 1_2:-13213158 Msa0057260:CDS
ATGATGGATGTAAGCAAGGG+TGG 0.681281 1_2:-13222143 Msa0057260:CDS
ATTACTGATCTTCTACACCC+TGG 0.702960 1_2:-13222915 Msa0057260:intron
GTCACACTGATACTTCACAA+TGG 0.703629 1_2:-13227328 Msa0057260:CDS
AAACAACATGATCCTGTGGG+AGG 0.704413 1_2:+13212418 None:intergenic
AAACAACATGATCCTGTGGG+AGG 0.704413 1_2:+13221364 None:intergenic
ATGGACTTCCAGTAATACTG+AGG 0.710834 1_2:+13222966 None:intergenic
GTCACACTGATACATCACAA+TGG 0.716833 1_2:-13212506 Msa0057260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTAAAAAAAAAA+AGG - chr1_2:13219463-13219482 Msa0057260:intron 0.0%
!!! AAATAAATAAATAAATTTTT+TGG + chr1_2:13222087-13222106 None:intergenic 0.0%
!! TATAGTGTTTATTAAATTTA+AGG + chr1_2:13212941-13212960 None:intergenic 10.0%
!!! CATATTTAAAATTTAGATTA+AGG - chr1_2:13213509-13213528 Msa0057260:intron 10.0%
!!! AAGAATTAGTTTTTTTTTTA+AGG + chr1_2:13215246-13215265 None:intergenic 10.0%
!!! CAAAAAATATATTTTTTTAG+AGG - chr1_2:13215393-13215412 Msa0057260:intron 10.0%
!! TTATTAAAATATCAGTTATA+AGG + chr1_2:13219167-13219186 None:intergenic 10.0%
!! ATTAATATACATTCATAAAT+TGG + chr1_2:13220734-13220753 None:intergenic 10.0%
!! TTATGAATGTATATTAATAA+AGG - chr1_2:13220736-13220755 Msa0057260:intron 10.0%
!! ATAACTATTAATATTTGATT+TGG + chr1_2:13221752-13221771 None:intergenic 10.0%
!!! ATTAATGTTTTTAATTTATG+TGG + chr1_2:13224421-13224440 None:intergenic 10.0%
!! ATTAAAAACATTAATTGATA+TGG - chr1_2:13224426-13224445 Msa0057260:intron 10.0%
!! ATAAATTAGAATATGTATAA+TGG + chr1_2:13226843-13226862 None:intergenic 10.0%
!! CATTGTTTAATTATGTTATA+TGG - chr1_2:13213011-13213030 Msa0057260:CDS 15.0%
!! CATATATAAGTAATACATAA+TGG + chr1_2:13213056-13213075 None:intergenic 15.0%
!!! TAAATTTTAAATATGCATAG+GGG + chr1_2:13213504-13213523 None:intergenic 15.0%
!!! CTAAATTTTAAATATGCATA+GGG + chr1_2:13213505-13213524 None:intergenic 15.0%
!!! TCTAAATTTTAAATATGCAT+AGG + chr1_2:13213506-13213525 None:intergenic 15.0%
!! AAACTCTATTATTTGATTAT+TGG + chr1_2:13213739-13213758 None:intergenic 15.0%
!!! TAATTATTTTATTTTCTGAG+AGG + chr1_2:13215212-13215231 None:intergenic 15.0%
!!! TGTTTGTTATAGATTTTTTA+AGG - chr1_2:13215287-13215306 Msa0057260:intron 15.0%
!!! CATTGGTTTTAAAAAAAATT+CGG + chr1_2:13215930-13215949 None:intergenic 15.0%
!!! TTTTAAATAGTGTTTTTCAT+CGG - chr1_2:13216724-13216743 Msa0057260:intron 15.0%
!! AATTAAAATGGTTGAATTTA+TGG + chr1_2:13216972-13216991 None:intergenic 15.0%
!! TTTGAAGACATTAATTAAAA+TGG + chr1_2:13216984-13217003 None:intergenic 15.0%
!! CAATTAAAAACAGTAAATTA+TGG + chr1_2:13217913-13217932 None:intergenic 15.0%
!! ATATGTTAAATTATGCTTTA+TGG - chr1_2:13218880-13218899 Msa0057260:intron 15.0%
!!! AGCAAATTTTCATATTAAAA+AGG + chr1_2:13219018-13219037 None:intergenic 15.0%
!!! TTGCTTTATTTTATTGTATT+TGG - chr1_2:13219033-13219052 Msa0057260:intron 15.0%
!!! TGCTTTATTTTATTGTATTT+GGG - chr1_2:13219034-13219053 Msa0057260:intron 15.0%
!! TTTACAATACTTTCAAATTA+TGG + chr1_2:13219342-13219361 None:intergenic 15.0%
!!! TAGAAAATAAAAGAGTATTT+TGG - chr1_2:13221047-13221066 Msa0057260:intron 15.0%
!! TTTATTAATTTATGCCTTAA+GGG + chr1_2:13221094-13221113 None:intergenic 15.0%
!! ATTTATTAATTTATGCCTTA+AGG + chr1_2:13221095-13221114 None:intergenic 15.0%
!! TTGAGAAATTATACAAAAAA+TGG - chr1_2:13221668-13221687 Msa0057260:CDS 15.0%
!! TCAAATATTAATAGTTATAG+AGG - chr1_2:13221754-13221773 Msa0057260:CDS 15.0%
!! ATATATATAGTAAATGTCTT+TGG - chr1_2:13221911-13221930 Msa0057260:intron 15.0%
!! TATATATAGTAAATGTCTTT+GGG - chr1_2:13221912-13221931 Msa0057260:intron 15.0%
!! AAGTAATAATGATATGTTTA+AGG - chr1_2:13222718-13222737 Msa0057260:intron 15.0%
!! TTTAATACATATACAAACAA+AGG - chr1_2:13222914-13222933 Msa0057260:intron 15.0%
!! AAATATAAATGCATAGTATT+TGG + chr1_2:13223183-13223202 None:intergenic 15.0%
!!! TTTTTTTGAAGACATAAAAA+TGG + chr1_2:13223317-13223336 None:intergenic 15.0%
!! TATGTCTTCAAAAAAAAAAA+CGG - chr1_2:13223321-13223340 Msa0057260:intron 15.0%
!! TCTACTATCAATATATTTAA+CGG - chr1_2:13223557-13223576 Msa0057260:intron 15.0%
!! AAGTAATAATGATATGTTAA+AGG - chr1_2:13224045-13224064 Msa0057260:intron 15.0%
!!! TGTTTTTATTATGAGATTAA+TGG + chr1_2:13224513-13224532 None:intergenic 15.0%
!!! TTTTTATTATATCAACTTTC+AGG - chr1_2:13224605-13224624 Msa0057260:intron 15.0%
!!! TTTTATTATATCAACTTTCA+GGG - chr1_2:13224606-13224625 Msa0057260:intron 15.0%
!! TAGTAAAAGATGTATTTAAT+AGG + chr1_2:13225578-13225597 None:intergenic 15.0%
!! ACATACAAACTAAAAAAAAA+AGG - chr1_2:13225815-13225834 Msa0057260:intron 15.0%
!!! ATTAATGATAATGTAATTAG+AGG - chr1_2:13226291-13226310 Msa0057260:intron 15.0%
!! ATAGGATAAAAGTAAAAAAA+TGG + chr1_2:13227004-13227023 None:intergenic 15.0%
!! ACATAAAAAGATAAATGTTT+AGG + chr1_2:13227631-13227650 None:intergenic 15.0%
!!! TTGAAAAGTTTTCAATTACT+TGG + chr1_2:13212900-13212919 None:intergenic 20.0%
!! TAAATTTAAGGATAATCCTA+TGG + chr1_2:13212929-13212948 None:intergenic 20.0%
!!! CTTTAATTTCATTGTATTTG+AGG - chr1_2:13213189-13213208 Msa0057260:CDS 20.0%
!! TAATACAAATGAACAATCAA+GGG + chr1_2:13213394-13213413 None:intergenic 20.0%
!!! TAATGTTTTAGTTTCTGTTA+GGG + chr1_2:13213462-13213481 None:intergenic 20.0%
!! TGATAACAAAAACTTTAAGT+TGG - chr1_2:13213535-13213554 Msa0057260:intron 20.0%
!!! AACTATTTCTTTTTATCGTT+TGG + chr1_2:13213674-13213693 None:intergenic 20.0%
!!! ATCTAAAACTTAGCTTAAAA+AGG - chr1_2:13213914-13213933 Msa0057260:CDS 20.0%
!! ATCATTTCCCTATAATAAAA+GGG - chr1_2:13214196-13214215 Msa0057260:intron 20.0%
!!! AACATTTTGATCATTTTAAG+TGG + chr1_2:13214323-13214342 None:intergenic 20.0%
!!! AGGAAAGTTTTTAATTTGAT+AGG + chr1_2:13214700-13214719 None:intergenic 20.0%
!! GGAAAAACTAATAATATTAG+CGG + chr1_2:13215191-13215210 None:intergenic 20.0%
!!! GAAGAGTTGTTTTTTTTTTT+TGG + chr1_2:13216355-13216374 None:intergenic 20.0%
!! TTTGCAATATCGATATTATT+AGG - chr1_2:13216648-13216667 Msa0057260:intron 20.0%
!!! ACACATAATTGAGATATTTT+AGG + chr1_2:13216699-13216718 None:intergenic 20.0%
!! TATCACTCATAGTTATATAA+AGG - chr1_2:13216792-13216811 Msa0057260:intron 20.0%
!! TGAGAAAGAAAAATGATATT+TGG + chr1_2:13217710-13217729 None:intergenic 20.0%
!!! TCATGAAAAGCATAATATTT+AGG + chr1_2:13218685-13218704 None:intergenic 20.0%
!! TATATAGTACTCATTATTCA+AGG + chr1_2:13218814-13218833 None:intergenic 20.0%
!!! GCTTTATTTTATTGTATTTG+GGG - chr1_2:13219035-13219054 Msa0057260:intron 20.0%
!! AAATAACATTGTTTATGGTT+TGG - chr1_2:13219259-13219278 Msa0057260:intron 20.0%
!! TATTGTAAAAGTTTGATGTT+CGG - chr1_2:13219353-13219372 Msa0057260:intron 20.0%
!!! AGATTTTAGAGAGAAAAATT+GGG - chr1_2:13219793-13219812 Msa0057260:intron 20.0%
!! AAATTATAGATGAAAGTTGA+CGG - chr1_2:13219836-13219855 Msa0057260:intron 20.0%
!!! TTGTGAAATTTTGGAAATTT+TGG - chr1_2:13219894-13219913 Msa0057260:intron 20.0%
!!! TGTGAAATTTTGGAAATTTT+GGG - chr1_2:13219895-13219914 Msa0057260:intron 20.0%
!!! AATCTCCATATTTTTTTAAG+AGG + chr1_2:13220688-13220707 None:intergenic 20.0%
!! TGAATGTATATTAATAAAGG+AGG - chr1_2:13220739-13220758 Msa0057260:intron 20.0%
!! GAATGTATATTAATAAAGGA+GGG - chr1_2:13220740-13220759 Msa0057260:intron 20.0%
!!! AATAAAAGAGTATTTTGGTA+TGG - chr1_2:13221052-13221071 Msa0057260:intron 20.0%
!!! TAGAGAATAAAAGAGTATTT+TGG - chr1_2:13221127-13221146 Msa0057260:intron 20.0%
!!! AATAAAAGAGTATTTTGGTA+AGG - chr1_2:13221052-13221071 Msa0057260:intron 20.0%
!!! ATAAAAGAGTATTTTGGTAA+GGG - chr1_2:13221133-13221152 Msa0057260:intron 20.0%
!! TAAAAAAACTTGTGTCTTTA+GGG + chr1_2:13221174-13221193 None:intergenic 20.0%
!! TTAAAAAAACTTGTGTCTTT+AGG + chr1_2:13221175-13221194 None:intergenic 20.0%
!!! AATTTAAGACAATTTCCTAA+GGG + chr1_2:13221580-13221599 None:intergenic 20.0%
!!! TAATTTAAGACAATTTCCTA+AGG + chr1_2:13221581-13221600 None:intergenic 20.0%
!! TTCAACGAAAAATTACTAAA+TGG - chr1_2:13221617-13221636 Msa0057260:intron 20.0%
!!! TGATGGGTTTTTAAATTTTT+TGG + chr1_2:13221828-13221847 None:intergenic 20.0%
!! TCATAATCTAACTAATTTCA+TGG - chr1_2:13222313-13222332 Msa0057260:intron 20.0%
!! CATAATCTAACTAATTTCAT+GGG - chr1_2:13222314-13222333 Msa0057260:intron 20.0%
!! TCATAATCTAACTAATTTCA+TGG - chr1_2:13222313-13222332 Msa0057260:intron 20.0%
!! CATAATCTAACTAATTTCAT+GGG - chr1_2:13222314-13222333 Msa0057260:intron 20.0%
!! TCATAATCTAACTAATTTCA+TGG - chr1_2:13222313-13222332 Msa0057260:intron 20.0%
!! CATAATCTAACTAATTTCAT+GGG - chr1_2:13222314-13222333 Msa0057260:intron 20.0%
!! TAATAAAAATATCTTGGATG+AGG - chr1_2:13222643-13222662 Msa0057260:intron 20.0%
!! TTAGTACTAGTATTAATAAG+GGG + chr1_2:13222868-13222887 None:intergenic 20.0%
!! GTTAGTACTAGTATTAATAA+GGG + chr1_2:13222869-13222888 None:intergenic 20.0%
!! AGTTAGTACTAGTATTAATA+AGG + chr1_2:13222870-13222889 None:intergenic 20.0%
!! AATATAAATGTACAGTGTTT+AGG - chr1_2:13223061-13223080 Msa0057260:intron 20.0%
!! TTAGATTATGAGTTTAATCA+AGG + chr1_2:13223665-13223684 None:intergenic 20.0%
!! TCATAATCTAACTAATTTCA+TGG - chr1_2:13222313-13222332 Msa0057260:intron 20.0%
!! CATAATCTAACTAATTTCAT+GGG - chr1_2:13222314-13222333 Msa0057260:intron 20.0%
!! TACAATGCATAAAATATGTA+AGG - chr1_2:13223808-13223827 Msa0057260:intron 20.0%
!! TTCATACGAAGTTAAAAAAA+CGG - chr1_2:13224137-13224156 Msa0057260:intron 20.0%
!! TAAAAGAGTTTAATAGTGAT+AGG - chr1_2:13224342-13224361 Msa0057260:intron 20.0%
!!! ACATAATATTTTTGTATCAC+AGG - chr1_2:13224847-13224866 Msa0057260:intron 20.0%
!! TTCTCAATAAAAAATAAGAC+CGG + chr1_2:13225420-13225439 None:intergenic 20.0%
!!! TATTATGTTTCTAATTCACA+TGG - chr1_2:13225459-13225478 Msa0057260:intron 20.0%
!!! TCACATCATTACTTTTTTAA+TGG - chr1_2:13225990-13226009 Msa0057260:intron 20.0%
!! AATCAAAATAGTTCAATTTG+TGG + chr1_2:13226031-13226050 None:intergenic 20.0%
!! GTTAATATATTCTCAAATGT+AGG - chr1_2:13226121-13226140 Msa0057260:intron 20.0%
!! AAACACTTATGTGATTAATT+CGG + chr1_2:13226442-13226461 None:intergenic 20.0%
!!! TTTTAATTGAAGCTGAATAT+TGG - chr1_2:13226879-13226898 Msa0057260:intron 20.0%
!! GAAACAACTTCAAATAATAA+TGG - chr1_2:13227130-13227149 Msa0057260:intron 20.0%
!! AACTTTTCAATTTCATCCAT+AGG - chr1_2:13212910-13212929 Msa0057260:CDS 25.0%
! AATTATGTTATATGGTTCCA+AGG - chr1_2:13213019-13213038 Msa0057260:CDS 25.0%
!!! TGTATTGTTTTGTTCAACTT+TGG + chr1_2:13213329-13213348 None:intergenic 25.0%
! TACAGAATGTAAAATGAATC+AGG - chr1_2:13213345-13213364 Msa0057260:intron 25.0%
! ACAGAATGTAAAATGAATCA+GGG - chr1_2:13213346-13213365 Msa0057260:intron 25.0%
! CTAATACAAATGAACAATCA+AGG + chr1_2:13213395-13213414 None:intergenic 25.0%
!!! AATGTTTTAGTTTCTGTTAG+GGG + chr1_2:13213461-13213480 None:intergenic 25.0%
!!! CTAATGTTTTAGTTTCTGTT+AGG + chr1_2:13213463-13213482 None:intergenic 25.0%
! CTAACAGAAACTAAAACATT+AGG - chr1_2:13213461-13213480 Msa0057260:intron 25.0%
! TTCATTGCTTAAAATAAGAG+TGG + chr1_2:13213629-13213648 None:intergenic 25.0%
!! GAAAATTTAAAGTACTCCTA+AGG + chr1_2:13214045-13214064 None:intergenic 25.0%
!!! AGGAGTACTTTAAATTTTCT+TGG - chr1_2:13214046-13214065 Msa0057260:intron 25.0%
! GGAAATGATGTTTACATATA+GGG + chr1_2:13214185-13214204 None:intergenic 25.0%
! CATCATTTCCCTATAATAAA+AGG - chr1_2:13214195-13214214 Msa0057260:intron 25.0%
! AAAATGATCAAAATGTTGAG+CGG - chr1_2:13214326-13214345 Msa0057260:intron 25.0%
! GTTACATAATTGCTTAGAAT+AGG - chr1_2:13214390-13214409 Msa0057260:intron 25.0%
!!! ATTGAGATGATCTTTGATTT+TGG + chr1_2:13214669-13214688 None:intergenic 25.0%
! ATCTAAGAAAAGAAGGTTAA+AGG + chr1_2:13214720-13214739 None:intergenic 25.0%
!!! CTAGTTTTCATATTTTCCTA+AGG - chr1_2:13214747-13214766 Msa0057260:intron 25.0%
!!! TCCTAAATTTTAGAAGTCAA+GGG + chr1_2:13214778-13214797 None:intergenic 25.0%
!!! ATCCTAAATTTTAGAAGTCA+AGG + chr1_2:13214779-13214798 None:intergenic 25.0%
!!! ACTTCTAAAATTTAGGATCA+GGG - chr1_2:13214781-13214800 Msa0057260:intron 25.0%
!!! CTATTTCTACACCAAAAAAA+AGG + chr1_2:13214947-13214966 None:intergenic 25.0%
! TTAGGTGATTGTAATATTTG+CGG + chr1_2:13215123-13215142 None:intergenic 25.0%
! CTAATATTGTATGTTTCAGA+GGG - chr1_2:13215139-13215158 Msa0057260:intron 25.0%
! TTTAGAGGAGAGAAAAAATA+AGG - chr1_2:13215408-13215427 Msa0057260:intron 25.0%
! TTAGAGGAGAGAAAAAATAA+GGG - chr1_2:13215409-13215428 Msa0057260:intron 25.0%
! AGATATATAGGAATCTACTT+GGG + chr1_2:13215744-13215763 None:intergenic 25.0%
!! AAAACTATGTGACAGATTTT+TGG + chr1_2:13215817-13215836 None:intergenic 25.0%
!! TGTACAATTTTTCTGATTGT+TGG + chr1_2:13215869-13215888 None:intergenic 25.0%
!! AATGTATTTTCGATGTGTAT+GGG - chr1_2:13215946-13215965 Msa0057260:intron 25.0%
! ATATGAGTTACTAATAGTTG+CGG + chr1_2:13216014-13216033 None:intergenic 25.0%
! CTAGCAAAAAATATTTGTCT+CGG - chr1_2:13216088-13216107 Msa0057260:intron 25.0%
! TCTATTTAAACCAAGTTGTT+TGG - chr1_2:13216179-13216198 Msa0057260:intron 25.0%
! CTATTTAAACCAAGTTGTTT+GGG - chr1_2:13216180-13216199 Msa0057260:intron 25.0%
! TTCCTTATAATAATCAAGAC+CGG + chr1_2:13216531-13216550 None:intergenic 25.0%
! ATATTAATGAGAAGTTGAGA+TGG + chr1_2:13216839-13216858 None:intergenic 25.0%
! GCTAACGATTTATATATACT+TGG + chr1_2:13217502-13217521 None:intergenic 25.0%
! TGAGTTAAATAATAACGAGT+AGG + chr1_2:13217650-13217669 None:intergenic 25.0%
!!! ATGCAACTAGTTTTTAACTA+AGG + chr1_2:13217755-13217774 None:intergenic 25.0%
! AGTATTTGAAAGTTTAAGCA+TGG - chr1_2:13217816-13217835 Msa0057260:intron 25.0%
!!! TTACTGTTTTTAATTGAAGC+TGG - chr1_2:13217917-13217936 Msa0057260:intron 25.0%
!!! TTTTAATTGAAGCTGGATAT+TGG - chr1_2:13217924-13217943 Msa0057260:intron 25.0%
! AAGTAAAACAATGGAACAAA+TGG + chr1_2:13218055-13218074 None:intergenic 25.0%
! AAAGCATACAAGTAAAACAA+TGG + chr1_2:13218064-13218083 None:intergenic 25.0%
! TTGAAAAAAGATTTGCATCA+TGG - chr1_2:13218136-13218155 Msa0057260:intron 25.0%
! TCCAATTTGATTGATGAAAA+CGG + chr1_2:13218247-13218266 None:intergenic 25.0%
! GATTTCACTATTTCAAAACT+CGG - chr1_2:13218403-13218422 Msa0057260:intron 25.0%
! GAAGTGGATAAAAATAGTAA+TGG - chr1_2:13218451-13218470 Msa0057260:intron 25.0%
! CAACAATATGTTATAGCAAA+AGG - chr1_2:13218478-13218497 Msa0057260:intron 25.0%
! TTTAGATTCAATAGACACAA+GGG + chr1_2:13218956-13218975 None:intergenic 25.0%
!! TTTTAGATTCAATAGACACA+AGG + chr1_2:13218957-13218976 None:intergenic 25.0%
! TACTCTGTATATCTTAACAT+AGG - chr1_2:13219074-13219093 Msa0057260:intron 25.0%
! ACTCTGTATATCTTAACATA+GGG - chr1_2:13219075-13219094 Msa0057260:intron 25.0%
!! ACCTCTATTTGATTTCTTAT+TGG - chr1_2:13219137-13219156 Msa0057260:intron 25.0%
! TCCAATAAGAAATCAAATAG+AGG + chr1_2:13219141-13219160 None:intergenic 25.0%
! GTGTGAAATAACATTGTTTA+TGG - chr1_2:13219254-13219273 Msa0057260:intron 25.0%
! TAAGTGAAAACAGTCAAAAA+AGG + chr1_2:13219538-13219557 None:intergenic 25.0%
!!! GAGATTTTAGAGAGAAAAAT+TGG - chr1_2:13219792-13219811 Msa0057260:intron 25.0%
!!! GATTTTAGAGAGAAAAATTG+GGG - chr1_2:13219794-13219813 Msa0057260:intron 25.0%
!! ATAATTTGTCATGTCTATCA+CGG + chr1_2:13219823-13219842 None:intergenic 25.0%
!!! GTGATCAAGGTTTTAAATAA+CGG + chr1_2:13220046-13220065 None:intergenic 25.0%
! TGTGTTTATATGATTCATGT+TGG + chr1_2:13220111-13220130 None:intergenic 25.0%
! CAAATAATATGCATTTCATG+CGG - chr1_2:13220563-13220582 Msa0057260:intron 25.0%
! ATTGTCACCAAAGATAAATT+GGG + chr1_2:13220647-13220666 None:intergenic 25.0%
! AATTGTCACCAAAGATAAAT+TGG + chr1_2:13220648-13220667 None:intergenic 25.0%
! TTTGGCCTCTTAAAAAAATA+TGG - chr1_2:13220680-13220699 Msa0057260:intron 25.0%
!! ATCCTTTTGGTATTATAAGT+TGG - chr1_2:13221276-13221295 Msa0057260:intron 25.0%
! AACCAACTTATAATACCAAA+AGG + chr1_2:13221281-13221300 None:intergenic 25.0%
!!! GATTTTAAAATTGTTCACGA+GGG + chr1_2:13221330-13221349 None:intergenic 25.0%
!!! TGATTTTAAAATTGTTCACG+AGG + chr1_2:13221331-13221350 None:intergenic 25.0%
! TTTGAATGACTTAATGTCAA+GGG + chr1_2:13221392-13221411 None:intergenic 25.0%
!!! CTATTAATATTTGATTTGGC+CGG + chr1_2:13221748-13221767 None:intergenic 25.0%
! ATCCAAACCATTATTCTTAT+AGG + chr1_2:13221941-13221960 None:intergenic 25.0%
!!! TTTGTTATTCGTGATTGATT+CGG - chr1_2:13222155-13222174 Msa0057260:CDS 25.0%
! AGATGTTATTAAATTCGAAG+TGG + chr1_2:13222235-13222254 None:intergenic 25.0%
! TTAGATTATGAGTCTAATCA+AGG + chr1_2:13222304-13222323 None:intergenic 25.0%
! TTAGATTATGAGTCTAATCA+AGG + chr1_2:13222304-13222323 None:intergenic 25.0%
! TTAGATTATGAGTCTAATCA+AGG + chr1_2:13222304-13222323 None:intergenic 25.0%
! TTAGATTATGAGTCTAATCA+AGG + chr1_2:13222304-13222323 None:intergenic 25.0%
! GGACAAAAATAAAGTCAAAT+GGG + chr1_2:13222786-13222805 None:intergenic 25.0%
! TGAAAAAGGGTTTAGATTTA+GGG + chr1_2:13222807-13222826 None:intergenic 25.0%
! TTGAAAAAGGGTTTAGATTT+AGG + chr1_2:13222808-13222827 None:intergenic 25.0%
!! TATTAATAAGGGGTATGTTT+AGG + chr1_2:13222858-13222877 None:intergenic 25.0%
! AAGAAATGTGAAAAAAGCAA+AGG - chr1_2:13222996-13223015 Msa0057260:CDS 25.0%
! AGAAATGTGAAAAAAGCAAA+GGG - chr1_2:13222997-13223016 Msa0057260:CDS 25.0%
!!! GATTTAGTCTTTTGAGAAAA+AGG - chr1_2:13223139-13223158 Msa0057260:intron 25.0%
! AGTGTTGTGCAAATATTTAA+CGG - chr1_2:13223500-13223519 Msa0057260:intron 25.0%
! TCAAGGACAATTAAGAAAAT+TGG + chr1_2:13223648-13223667 None:intergenic 25.0%
!!! TGCCTACAATAATTTTGTTT+GGG - chr1_2:13224160-13224179 Msa0057260:intron 25.0%
! ATTATGAGATTAATGGTGAT+AGG + chr1_2:13224506-13224525 None:intergenic 25.0%
! TGTGTTGTGCAAATATTTAA+TGG - chr1_2:13224709-13224728 Msa0057260:intron 25.0%
!! ACTATTTCTCATAGCATTAA+TGG - chr1_2:13225243-13225262 Msa0057260:intron 25.0%
! GAGAAAAAAAACTAAATCAC+AGG - chr1_2:13225435-13225454 Msa0057260:intron 25.0%
! TCTAATTCACATGGATATAA+AGG - chr1_2:13225468-13225487 Msa0057260:intron 25.0%
!! CATATCCTTATTTCTTCTTA+GGG + chr1_2:13225679-13225698 None:intergenic 25.0%
!! ACATATCCTTATTTCTTCTT+AGG + chr1_2:13225680-13225699 None:intergenic 25.0%
! CATTAATGTGTATGACATTT+AGG - chr1_2:13225778-13225797 Msa0057260:intron 25.0%
!!! CATCATTACTTTTTTAATGG+TGG - chr1_2:13225993-13226012 Msa0057260:intron 25.0%
!!! CATTAATCACTTTTAACATG+TGG + chr1_2:13226278-13226297 None:intergenic 25.0%
!! GATTGATTCAGTTTATTATG+TGG + chr1_2:13226324-13226343 None:intergenic 25.0%
! TTCTAGTAGTTGCAAATATA+TGG - chr1_2:13226672-13226691 Msa0057260:intron 25.0%
! TTGAAAAAAGATTTGCATCA+TGG - chr1_2:13218136-13218155 Msa0057260:intron 25.0%
! TCCAATTTGATTGATGAAAA+GGG + chr1_2:13218247-13218266 None:intergenic 25.0%
! TTCCAATTTGATTGATGAAA+AGG + chr1_2:13218248-13218267 None:intergenic 25.0%
! GAAGTGGATAAAAATAGTAA+TGG - chr1_2:13218451-13218470 Msa0057260:intron 25.0%
! CAACAATATGTTATAGCAAA+AGG - chr1_2:13218478-13218497 Msa0057260:intron 25.0%
ATAAGTGAGTGTGAAGAAAA+TGG - chr1_2:13212455-13212474 Msa0057260:CDS 30.0%
! TGACTTGCAAGAATATGTAA+TGG - chr1_2:13212595-13212614 Msa0057260:CDS 30.0%
CAAGAATATGTAATGGCAAA+AGG - chr1_2:13212602-13212621 Msa0057260:CDS 30.0%
GACAGTAAAAAACTGCATAA+GGG + chr1_2:13212682-13212701 None:intergenic 30.0%
TGACAGTAAAAAACTGCATA+AGG + chr1_2:13212683-13212702 None:intergenic 30.0%
ACAATGGAATCCTAAACATT+TGG - chr1_2:13212796-13212815 Msa0057260:CDS 30.0%
ACTTGAAAAGCCAAATGTTT+AGG + chr1_2:13212809-13212828 None:intergenic 30.0%
TGAATCGTTGCAAGTAATAT+TGG - chr1_2:13213244-13213263 Msa0057260:intron 30.0%
ACAGAAACTAAAACATTAGG+TGG - chr1_2:13213464-13213483 Msa0057260:intron 30.0%
!! TTTAAGTTGGTTTCATGTGT+TGG - chr1_2:13213548-13213567 Msa0057260:intron 30.0%
GCTTCACAAAAGAAAAATAG+AGG - chr1_2:13213802-13213821 Msa0057260:intron 30.0%
!!! CTAAGTTTTAGATCTTTTGC+GGG + chr1_2:13213907-13213926 None:intergenic 30.0%
!!! GCTAAGTTTTAGATCTTTTG+CGG + chr1_2:13213908-13213927 None:intergenic 30.0%
TGTCAATACTTGAAATCTCT+TGG + chr1_2:13214088-13214107 None:intergenic 30.0%
ATGATGTTTACATATAGGGA+CGG + chr1_2:13214181-13214200 None:intergenic 30.0%
GGGAAATGATGTTTACATAT+AGG + chr1_2:13214186-13214205 None:intergenic 30.0%
AATTGCTTCACTAAACTTTC+CGG - chr1_2:13214267-13214286 Msa0057260:intron 30.0%
ATGCTTACGAAATTACAGTA+TGG + chr1_2:13214296-13214315 None:intergenic 30.0%
AGCAATTATGTAACCTAACT+AGG + chr1_2:13214384-13214403 None:intergenic 30.0%
TAAGCTTAACTCAATTGGTA+AGG + chr1_2:13214534-13214553 None:intergenic 30.0%
ATTCGTAAGCTTAACTCAAT+TGG + chr1_2:13214539-13214558 None:intergenic 30.0%
CACTACAATCTAAGAAAAGA+AGG + chr1_2:13214727-13214746 None:intergenic 30.0%
!! CCTAAATTTTAGAAGTCAAG+GGG + chr1_2:13214777-13214796 None:intergenic 30.0%
!! GACTTCTAAAATTTAGGATC+AGG - chr1_2:13214780-13214799 Msa0057260:intron 30.0%
!! CTTCTAAAATTTAGGATCAG+GGG - chr1_2:13214782-13214801 Msa0057260:intron 30.0%
! GCTTAACATCTTTTCTACTT+TGG + chr1_2:13214822-13214841 None:intergenic 30.0%
!! CCTCTGAAACATACAATATT+AGG + chr1_2:13215141-13215160 None:intergenic 30.0%
CCTAATATTGTATGTTTCAG+AGG - chr1_2:13215138-13215157 Msa0057260:intron 30.0%
AGAGAAAAAATAAGGGTCAA+AGG - chr1_2:13215416-13215435 Msa0057260:intron 30.0%
GAGATATATAGGAATCTACT+TGG + chr1_2:13215745-13215764 None:intergenic 30.0%
TAGATTCCTATATATCTCTC+TGG - chr1_2:13215747-13215766 Msa0057260:intron 30.0%
ACATTACCAGAGAGATATAT+AGG + chr1_2:13215756-13215775 None:intergenic 30.0%
!!! TATGTGACAGATTTTTGGTT+TGG + chr1_2:13215812-13215831 None:intergenic 30.0%
CATACACATCGAAAATACAT+TGG + chr1_2:13215947-13215966 None:intergenic 30.0%
! CAATGTATTTTCGATGTGTA+TGG - chr1_2:13215945-13215964 Msa0057260:intron 30.0%
AATTTGTATGTCAAGCCTAA+AGG - chr1_2:13216465-13216484 Msa0057260:intron 30.0%
ATTTGTATGTCAAGCCTAAA+GGG - chr1_2:13216466-13216485 Msa0057260:intron 30.0%
TCCTTATAATAATCAAGACC+GGG + chr1_2:13216530-13216549 None:intergenic 30.0%
AAGTAATGATGTGAAAGAGA+TGG + chr1_2:13216925-13216944 None:intergenic 30.0%
!! TCACATCATTACTTTTCTCA+TGG - chr1_2:13216931-13216950 Msa0057260:intron 30.0%
CAATGCATTGTTATATACAG+AGG + chr1_2:13217341-13217360 None:intergenic 30.0%
GTTAAATAATAACGAGTAGG+AGG + chr1_2:13217647-13217666 None:intergenic 30.0%
CACATGTAAAGCATAAAAAC+TGG + chr1_2:13217687-13217706 None:intergenic 30.0%
TTTGAAAGTTTAAGCATGGA+AGG - chr1_2:13217820-13217839 Msa0057260:intron 30.0%
TAAAGAGAAAGCAACAATGA+TGG - chr1_2:13217949-13217968 Msa0057260:intron 30.0%
GAGACAGCTTCAAATAAAAA+TGG - chr1_2:13218184-13218203 Msa0057260:intron 30.0%
! ATGGAATTAGCAACTTTTCT+AGG + chr1_2:13218223-13218242 None:intergenic 30.0%
TTTGATTGATGAAAACGGTA+TGG + chr1_2:13218242-13218261 None:intergenic 30.0%
! ACCGTTTTCATCAATCAAAT+TGG - chr1_2:13218243-13218262 Msa0057260:intron 30.0%
! AACAAGTTTTCCATCAAAGA+AGG - chr1_2:13218277-13218296 Msa0057260:intron 30.0%
! AAAGCTTTGTGTAACATCAT+TGG - chr1_2:13218369-13218388 Msa0057260:intron 30.0%
TGTAACATCATTGGAATCTA+TGG - chr1_2:13218378-13218397 Msa0057260:intron 30.0%
AGCAAAAGGAGTGAAAAAAT+TGG - chr1_2:13218492-13218511 Msa0057260:intron 30.0%
GCAAAAGGAGTGAAAAAATT+GGG - chr1_2:13218493-13218512 Msa0057260:intron 30.0%
GACAGTAAAAAACTGCATAA+GGG + chr1_2:13212682-13212701 None:intergenic 30.0%
TGACAGTAAAAAACTGCATA+AGG + chr1_2:13212683-13212702 None:intergenic 30.0%
GATACAACTATTGATGAAAG+GGG + chr1_2:13218792-13218811 None:intergenic 30.0%
GGATACAACTATTGATGAAA+GGG + chr1_2:13218793-13218812 None:intergenic 30.0%
AGGATACAACTATTGATGAA+AGG + chr1_2:13218794-13218813 None:intergenic 30.0%
! GTGTCAAGATATAGAGTTTT+TGG + chr1_2:13219102-13219121 None:intergenic 30.0%
!! GTTCAACTATTTTAAACCGT+TGG + chr1_2:13219320-13219339 None:intergenic 30.0%
AAAAAACTTTGGTTGTGATG+AGG + chr1_2:13219449-13219468 None:intergenic 30.0%
! AAAACAGTCAAAAAAGGTAC+CGG + chr1_2:13219532-13219551 None:intergenic 30.0%
ACTGCAACATAACATTGTTA+CGG - chr1_2:13219591-13219610 Msa0057260:intron 30.0%
ATGCTATCTAAGTTAGAAGA+TGG + chr1_2:13219693-13219712 None:intergenic 30.0%
TTTATATTACCAACTTGGAG+TGG + chr1_2:13219719-13219738 None:intergenic 30.0%
GGAGATTTATATTACCAACT+TGG + chr1_2:13219724-13219743 None:intergenic 30.0%
! CGTTAAGATTTTCGTGATTT+CGG + chr1_2:13220020-13220039 None:intergenic 30.0%
TATGCATCCCAATTTATCTT+TGG - chr1_2:13220637-13220656 Msa0057260:intron 30.0%
ATGGAGATTAGATAAGAAAG+TGG - chr1_2:13220699-13220718 Msa0057260:intron 30.0%
GTATATTAATAAAGGAGGGA+TGG - chr1_2:13220744-13220763 Msa0057260:intron 30.0%
AAAAAGGAAAGAGAAAGAGA+GGG - chr1_2:13220788-13220807 Msa0057260:intron 30.0%
TTTCTTAACATGTGTCTGAA+GGG - chr1_2:13221239-13221258 Msa0057260:intron 30.0%
! ACAAGTTAGCAATATCCTTT+TGG - chr1_2:13221263-13221282 Msa0057260:intron 30.0%
GTTTGAATGACTTAATGTCA+AGG + chr1_2:13221393-13221412 None:intergenic 30.0%
AGTATAAGAAAAGAACCACA+CGG + chr1_2:13221419-13221438 None:intergenic 30.0%
! GTGGTTCTTTTCTTATACTT+CGG - chr1_2:13221420-13221439 Msa0057260:CDS 30.0%
! ATCTTTTCTTTTGCTCGATT+AGG + chr1_2:13221647-13221666 None:intergenic 30.0%
CACCTATAAGAATAATGGTT+TGG - chr1_2:13221936-13221955 Msa0057260:intron 30.0%
!! TAATGGTTTGGATTAGCTTT+CGG - chr1_2:13221948-13221967 Msa0057260:intron 30.0%
CAAGGACAATTAAGTGAATT+TGG + chr1_2:13222286-13222305 None:intergenic 30.0%
AACTAATTTCATGGGCTTAA+TGG - chr1_2:13222322-13222341 Msa0057260:intron 30.0%
CAAGGACAATTAAGTGAATT+TGG + chr1_2:13222286-13222305 None:intergenic 30.0%
CAAGGACAATTAAGTGAATT+TGG + chr1_2:13222286-13222305 None:intergenic 30.0%
AACTAATTTCATGGGCTTAA+TGG - chr1_2:13222322-13222341 Msa0057260:intron 30.0%
CAAGGACAATTAAGTGAATT+TGG + chr1_2:13222286-13222305 None:intergenic 30.0%
AACTAATTTCATGGGCTTAA+TGG - chr1_2:13222322-13222341 Msa0057260:intron 30.0%
CAAAAATAAAGTCAAATGGG+TGG + chr1_2:13222783-13222802 None:intergenic 30.0%
GGGACAAAAATAAAGTCAAA+TGG + chr1_2:13222787-13222806 None:intergenic 30.0%
!!! AAACCCTTTTTCAAACTACT+AGG - chr1_2:13222814-13222833 Msa0057260:intron 30.0%
AGGACAATTAAGAAAATTGG+TGG + chr1_2:13223645-13223664 None:intergenic 30.0%
AACTAATTTCATGGGCTTAA+TGG - chr1_2:13222322-13222341 Msa0057260:intron 30.0%
TGCATAAAATATGTAAGGTC+CGG - chr1_2:13223813-13223832 Msa0057260:intron 30.0%
! GTGCCTACAATAATTTTGTT+TGG - chr1_2:13224159-13224178 Msa0057260:intron 30.0%
AGCCCAAACAAAATTATTGT+AGG + chr1_2:13224165-13224184 None:intergenic 30.0%
! GTCAATTTTCTTCAGCTTAA+TGG - chr1_2:13224195-13224214 Msa0057260:intron 30.0%
ATAAAGTCTCAAATGAGTGT+TGG - chr1_2:13224269-13224288 Msa0057260:intron 30.0%
TAAAGTCTCAAATGAGTGTT+GGG - chr1_2:13224270-13224289 Msa0057260:intron 30.0%
! AGTGTTGGGAGAATATTTAA+CGG - chr1_2:13224284-13224303 Msa0057260:intron 30.0%
! GTTTAATAGTGATAGGTTGA+TGG - chr1_2:13224349-13224368 Msa0057260:intron 30.0%
!! TTGTGTTTGCAATGTTGTTT+TGG + chr1_2:13224376-13224395 None:intergenic 30.0%
AGTGCAGTGCAAATATTTAA+CGG - chr1_2:13224893-13224912 Msa0057260:intron 30.0%
GATGTACAGTAGAAAAATGA+CGG + chr1_2:13225188-13225207 None:intergenic 30.0%
ATTTCTCATAGCATTAATGG+TGG - chr1_2:13225246-13225265 Msa0057260:intron 30.0%
TAGTAATTGTGTACTCTATC+CGG - chr1_2:13225398-13225417 Msa0057260:intron 30.0%
ATTCACATGGATATAAAGGA+CGG - chr1_2:13225472-13225491 Msa0057260:intron 30.0%
CTTGCAATGACGATATTATT+AGG - chr1_2:13225718-13225737 Msa0057260:intron 30.0%
GAAGTTTCGTGTTTAAATTC+AGG + chr1_2:13225757-13225776 None:intergenic 30.0%
TAATGTGTATGACATTTAGG+TGG - chr1_2:13225781-13225800 Msa0057260:intron 30.0%
AATGTGTATGACATTTAGGT+GGG - chr1_2:13225782-13225801 Msa0057260:intron 30.0%
! TTTTGTCCCTCGTTATATAA+AGG - chr1_2:13225860-13225879 Msa0057260:intron 30.0%
TTTGTCCCTCGTTATATAAA+GGG - chr1_2:13225861-13225880 Msa0057260:intron 30.0%
AAGAACCCTTTATATAACGA+GGG + chr1_2:13225869-13225888 None:intergenic 30.0%
AAAGAGATGAAATTCCATGT+TGG + chr1_2:13225971-13225990 None:intergenic 30.0%
CAAAATAGTTCAATTTGTGG+AGG + chr1_2:13226028-13226047 None:intergenic 30.0%
AAATTGCATGATACAAACCA+GGG + chr1_2:13226250-13226269 None:intergenic 30.0%
AAAATTGCATGATACAAACC+AGG + chr1_2:13226251-13226270 None:intergenic 30.0%
!! TAATCACTTTTAACATGTGG+AGG + chr1_2:13226275-13226294 None:intergenic 30.0%
TCATGATTCGTTTAATGAGT+TGG + chr1_2:13226540-13226559 None:intergenic 30.0%
GACAGTGCATAATATATGAA+AGG - chr1_2:13226700-13226719 Msa0057260:intron 30.0%
CATAATATATGAAAGGTCTG+AGG - chr1_2:13226707-13226726 Msa0057260:intron 30.0%
CAATAACAAACAGACTCATA+AGG - chr1_2:13226744-13226763 Msa0057260:intron 30.0%
AGTTGAAGCATATCTATAGA+AGG - chr1_2:13226775-13226794 Msa0057260:intron 30.0%
TGACTCTCATTGAATACTAT+AGG + chr1_2:13227022-13227041 None:intergenic 30.0%
TTTGATTGATGAAAAGGGTA+TGG + chr1_2:13227188-13227207 None:intergenic 30.0%
! ACCCTTTTCATCAATCAAAT+TGG - chr1_2:13227189-13227208 Msa0057260:intron 30.0%
! AACAAGTTTTCCATCAAAGA+AGG - chr1_2:13218277-13218296 Msa0057260:intron 30.0%
! AAAGCTTTGTGTAACATCAT+TGG - chr1_2:13218369-13218388 Msa0057260:intron 30.0%
TGTAACATCATTGGAATCTA+TGG - chr1_2:13218378-13218397 Msa0057260:intron 30.0%
GATTTCACTATTTCGAAACT+CGG - chr1_2:13227349-13227368 Msa0057260:CDS 30.0%
GACAGTAAAAAACTGCATAA+GGG + chr1_2:13212682-13212701 None:intergenic 30.0%
TGACAGTAAAAAACTGCATA+AGG + chr1_2:13212683-13212702 None:intergenic 30.0%
TTCTTCTGTTCCTTCTTTGA+TGG + chr1_2:13212414-13212433 None:intergenic 35.0%
TGTGAAGAAAATGGCATCAA+AGG - chr1_2:13212464-13212483 Msa0057260:CDS 35.0%
! AAAGCTTTGTGTGACATCAT+TGG - chr1_2:13212493-13212512 Msa0057260:CDS 35.0%
TGTGACATCATTGGAATCTA+TGG - chr1_2:13212502-13212521 Msa0057260:CDS 35.0%
GATTTCACTACTTCGAAACT+TGG - chr1_2:13212527-13212546 Msa0057260:CDS 35.0%
! GCAAAAGGTGTGAAGAAATT+GGG - chr1_2:13212617-13212636 Msa0057260:CDS 35.0%
TAAAGTTTACTCTGTGCCTT+TGG - chr1_2:13212718-13212737 Msa0057260:CDS 35.0%
! ACACAACAACAGCTTTAACT+CGG + chr1_2:13212760-13212779 None:intergenic 35.0%
! TAATGGACATACACAAACCT+TGG + chr1_2:13213039-13213058 None:intergenic 35.0%
TCATAAGGTTCAACTCAGTT+AGG + chr1_2:13213429-13213448 None:intergenic 35.0%
! ACTGAGTTGAACCTTATGAT+AGG - chr1_2:13213430-13213449 Msa0057260:intron 35.0%
! AGTTAATTTTCCCGTCGTTA+GGG + chr1_2:13213773-13213792 None:intergenic 35.0%
!! TTCTTTTGTGAAGCACTATG+AGG + chr1_2:13213796-13213815 None:intergenic 35.0%
TGATACTGAGAGATCAAGAT+AGG + chr1_2:13213857-13213876 None:intergenic 35.0%
TTGAGTAGTAGCAAATCCTT+AGG - chr1_2:13214026-13214045 Msa0057260:intron 35.0%
! TTTAAATTTTCTTGGCGAGC+TGG - chr1_2:13214054-13214073 Msa0057260:intron 35.0%
AACATGTATATCTCGCTTTG+AGG - chr1_2:13214121-13214140 Msa0057260:intron 35.0%
! CCAAGCACCCTTTTATTATA+GGG + chr1_2:13214206-13214225 None:intergenic 35.0%
! TCCAAGCACCCTTTTATTAT+AGG + chr1_2:13214207-13214226 None:intergenic 35.0%
!! ATAAAAGGGTGCTTGGATAT+AGG - chr1_2:13214210-13214229 Msa0057260:intron 35.0%
!! TAAAAGGGTGCTTGGATATA+GGG - chr1_2:13214211-13214230 Msa0057260:intron 35.0%
! ACTCTAAGAATTGCCTAGTT+AGG - chr1_2:13214368-13214387 Msa0057260:intron 35.0%
TTGGTAAGGACGTTAAGTTT+GGG + chr1_2:13214520-13214539 None:intergenic 35.0%
ATTGGTAAGGACGTTAAGTT+TGG + chr1_2:13214521-13214540 None:intergenic 35.0%
TGAAGACAAACAACAAGCTA+AGG + chr1_2:13214586-13214605 None:intergenic 35.0%
!! CCCCTTGACTTCTAAAATTT+AGG - chr1_2:13214774-13214793 Msa0057260:intron 35.0%
! TAAAATTTAGGATCAGGGGT+GGG - chr1_2:13214786-13214805 Msa0057260:intron 35.0%
ACCAAAAAAAAGGTCAGGTT+CGG + chr1_2:13214937-13214956 None:intergenic 35.0%
TCTACACCAAAAAAAAGGTC+AGG + chr1_2:13214942-13214961 None:intergenic 35.0%
AAGATGCATTATGACATGTC+AGG + chr1_2:13215058-13215077 None:intergenic 35.0%
ACATGACATAATCCATTTCC+TGG - chr1_2:13215087-13215106 Msa0057260:intron 35.0%
GATTGTAATATTTGCGGTGA+TGG + chr1_2:13215117-13215136 None:intergenic 35.0%
TATGTTTCAGAGGGATTGTT+TGG - chr1_2:13215148-13215167 Msa0057260:intron 35.0%
TAATAATATTAGCGGTGAGC+CGG + chr1_2:13215183-13215202 None:intergenic 35.0%
ACTGCAAATGAGATGTGTAA+TGG - chr1_2:13215716-13215735 Msa0057260:intron 35.0%
!!! TTTTTTTTTGGCTTTCGCAC+CGG + chr1_2:13216343-13216362 None:intergenic 35.0%
CTTATAATAATCAAGACCGG+GGG + chr1_2:13216528-13216547 None:intergenic 35.0%
CCTTATAATAATCAAGACCG+GGG + chr1_2:13216529-13216548 None:intergenic 35.0%
TCGGTGTACAAACCAAAAAA+AGG - chr1_2:13216743-13216762 Msa0057260:intron 35.0%
GTGATAGACACTTGAAACAA+AGG + chr1_2:13216778-13216797 None:intergenic 35.0%
AGTTGAGATGGAATGAAACA+AGG + chr1_2:13216827-13216846 None:intergenic 35.0%
TCAGCTTCACTAATCCAATA+TGG - chr1_2:13216895-13216914 Msa0057260:intron 35.0%
AAAGAGATGGAACTCCATAT+TGG + chr1_2:13216912-13216931 None:intergenic 35.0%
TATTTCCACCTCAGTATTAC+TGG - chr1_2:13217134-13217153 Msa0057260:intron 35.0%
! AGAAGATCAGTAATGGCTTT+TGG + chr1_2:13217187-13217206 None:intergenic 35.0%
TTAGAGTATGATACTGACCA+GGG + chr1_2:13217213-13217232 None:intergenic 35.0%
! TTTAGAGTATGATACTGACC+AGG + chr1_2:13217214-13217233 None:intergenic 35.0%
AGAGCTTGAAGTTAAACATG+TGG + chr1_2:13217269-13217288 None:intergenic 35.0%
TCAAGCTCTATCAACGAAAT+TGG - chr1_2:13217280-13217299 Msa0057260:intron 35.0%
CAAGCTCTATCAACGAAATT+GGG - chr1_2:13217281-13217300 Msa0057260:intron 35.0%
!! AACAATGATGGATGTAAGCA+AGG - chr1_2:13217961-13217980 Msa0057260:intron 35.0%
!! ACAATGATGGATGTAAGCAA+GGG - chr1_2:13217962-13217981 Msa0057260:intron 35.0%
TAGATGTTGGAGTCAGAAAA+GGG - chr1_2:13217990-13218009 Msa0057260:intron 35.0%
TTCCATCAAAGAAGGATCAA+AGG - chr1_2:13218285-13218304 Msa0057260:intron 35.0%
TTCCTTTGATCCTTCTTTGA+TGG + chr1_2:13218290-13218309 None:intergenic 35.0%
ATAAGTGAGTGTGAAGCAAA+TGG - chr1_2:13218331-13218350 Msa0057260:intron 35.0%
TTTCCATCAACACATTCCAA+GGG + chr1_2:13218613-13218632 None:intergenic 35.0%
ATGAGCTTAAAGTTCAACCT+GGG - chr1_2:13218701-13218720 Msa0057260:intron 35.0%
!!! AAAGGGGTTTTGTTTTCACT+TGG + chr1_2:13218776-13218795 None:intergenic 35.0%
!! GTTTTTCGTTCTAAGTCCAA+CGG - chr1_2:13219301-13219320 Msa0057260:intron 35.0%
!! ATGAGGATGATGGGAAATAA+TGG + chr1_2:13219432-13219451 None:intergenic 35.0%
! TTTTGTAACAGCCGAAATCT+CGG + chr1_2:13219496-13219515 None:intergenic 35.0%
!! AAACAGTCAAAAAAGGTACC+GGG + chr1_2:13219531-13219550 None:intergenic 35.0%
ACAACAACACCAACATAAGA+GGG + chr1_2:13219749-13219768 None:intergenic 35.0%
! ATGTCTGCGTTGTGAAATTT+TGG - chr1_2:13219885-13219904 Msa0057260:intron 35.0%
TTTCATCTTTCGTTCAGATC+TGG + chr1_2:13220228-13220247 None:intergenic 35.0%
ATAATATGCATTTCATGCGG+TGG - chr1_2:13220566-13220585 Msa0057260:intron 35.0%
! ATCTTTGGTGACAATTTCAG+TGG - chr1_2:13220652-13220671 Msa0057260:intron 35.0%
! TCTTTGGTGACAATTTCAGT+GGG - chr1_2:13220653-13220672 Msa0057260:intron 35.0%
!! ACAATTTCAGTGGGTTAGTT+TGG - chr1_2:13220662-13220681 Msa0057260:intron 35.0%
GAAAAAGGAAAGAGAAAGAG+AGG - chr1_2:13220787-13220806 Msa0057260:intron 35.0%
TTGGTATGGAAAATGCTAAC+CGG - chr1_2:13221066-13221085 Msa0057260:intron 35.0%
GTTTCTTAACATGTGTCTGA+AGG - chr1_2:13221238-13221257 Msa0057260:intron 35.0%
ATGACTTAATGTCAAGGGAT+TGG + chr1_2:13221387-13221406 None:intergenic 35.0%
CCAACAATTAGTTGTGTTGT+CGG - chr1_2:13221543-13221562 Msa0057260:intron 35.0%
CAAACTCTGCTTAGATCATA+CGG - chr1_2:13221717-13221736 Msa0057260:CDS 35.0%
TGGGTCACCTATAAGAATAA+TGG - chr1_2:13221931-13221950 Msa0057260:intron 35.0%
ATTATAGTTGCGGTTCAGTT+TGG + chr1_2:13221981-13222000 None:intergenic 35.0%
CGAACATGCTATTATAGTTG+CGG + chr1_2:13221991-13222010 None:intergenic 35.0%
AGCTTCCATTAACCATACAT+GGG + chr1_2:13222123-13222142 None:intergenic 35.0%
TAGCTTCCATTAACCATACA+TGG + chr1_2:13222124-13222143 None:intergenic 35.0%
GTCGTTGTATATAACATCAG+CGG - chr1_2:13222187-13222206 Msa0057260:intron 35.0%
TGTATATAACATCAGCGGTT+CGG - chr1_2:13222192-13222211 Msa0057260:intron 35.0%
GGACAATTAAGTGAATTTGG+TGG + chr1_2:13222283-13222302 None:intergenic 35.0%
GGACAATTAAGTGAATTTGG+TGG + chr1_2:13222283-13222302 None:intergenic 35.0%
GGACAATTAAGTGAATTTGG+TGG + chr1_2:13222283-13222302 None:intergenic 35.0%
GGACAATTAAGTGAATTTGG+TGG + chr1_2:13222283-13222302 None:intergenic 35.0%
CAAATGGGTGGTTAGATATA+GGG + chr1_2:13222771-13222790 None:intergenic 35.0%
TCAAATGGGTGGTTAGATAT+AGG + chr1_2:13222772-13222791 None:intergenic 35.0%
GCACCTAGTAGTTTGAAAAA+GGG + chr1_2:13222820-13222839 None:intergenic 35.0%
TGCACCTAGTAGTTTGAAAA+AGG + chr1_2:13222821-13222840 None:intergenic 35.0%
AATGTGAAAAAAGCAAAGGG+AGG - chr1_2:13223000-13223019 Msa0057260:CDS 35.0%
TACTCTACAATGAGAGAGTT+TGG + chr1_2:13223268-13223287 None:intergenic 35.0%
!! GGTGCGTACAATAATTTGTT+TGG - chr1_2:13223342-13223361 Msa0057260:intron 35.0%
! TAACGAGTGGTCAATTTTCA+TGG - chr1_2:13223369-13223388 Msa0057260:intron 35.0%
! AACGAGTGGTCAATTTTCAT+GGG - chr1_2:13223370-13223389 Msa0057260:intron 35.0%
! GTCAATTTTCATGGGCTTAA+TGG - chr1_2:13223378-13223397 Msa0057260:intron 35.0%
GCATAAAATATGTAAGGTCC+GGG - chr1_2:13223814-13223833 Msa0057260:intron 35.0%
CATAAAATATGTAAGGTCCG+GGG - chr1_2:13223815-13223834 Msa0057260:intron 35.0%
TATCAACTTTCAGGGCTTAA+TGG - chr1_2:13224614-13224633 Msa0057260:intron 35.0%
TACAGTAGAAAAATGACGGT+GGG + chr1_2:13225184-13225203 None:intergenic 35.0%
TAGATTCGTCTCAAAATGAG+TGG + chr1_2:13225380-13225399 None:intergenic 35.0%
TTCACATGGATATAAAGGAC+GGG - chr1_2:13225473-13225492 Msa0057260:intron 35.0%
ATGTGTATGACATTTAGGTG+GGG - chr1_2:13225783-13225802 Msa0057260:intron 35.0%
CAAGAACCCTTTATATAACG+AGG + chr1_2:13225870-13225889 None:intergenic 35.0%
!! AGAAGTACTTCTAGTTGAGA+TGG + chr1_2:13225910-13225929 None:intergenic 35.0%
TATTACCACCTCAACTTTAC+TGG - chr1_2:13226171-13226190 Msa0057260:intron 35.0%
CATTTCACTAGAAAGCTACA+TGG + chr1_2:13226367-13226386 None:intergenic 35.0%
ATTGGAGTAATGAGAAAGCA+AGG - chr1_2:13226897-13226916 Msa0057260:intron 35.0%
TTGGAGTAATGAGAAAGCAA+GGG - chr1_2:13226898-13226917 Msa0057260:intron 35.0%
AGCAATGGTGGTTTAAATGT+TGG - chr1_2:13226926-13226945 Msa0057260:intron 35.0%
TTAAATGTTGGAGCCAGAAA+AGG - chr1_2:13226938-13226957 Msa0057260:intron 35.0%
ATGGAATTAGCAACTTCTCT+AGG + chr1_2:13227169-13227188 None:intergenic 35.0%
TTCCATCAAAGAAGGATCAA+AGG - chr1_2:13218285-13218304 Msa0057260:intron 35.0%
TTCCTTTGATCCTTCTTTGA+TGG + chr1_2:13218290-13218309 None:intergenic 35.0%
TTAAGTGAGTGTGAAGCAAA+TGG - chr1_2:13227277-13227296 Msa0057260:CDS 35.0%
AGCAAAAGGAGTGAAGAAAT+TGG - chr1_2:13227438-13227457 Msa0057260:CDS 35.0%
GCAAAAGGAGTGAAGAAATT+GGG - chr1_2:13227439-13227458 Msa0057260:CDS 35.0%
TGAAGTTTACTATGTTGCTC+TGG - chr1_2:13227540-13227559 Msa0057260:CDS 35.0%
TATGTGCTTAAAGTTCAACC+AGG - chr1_2:13227646-13227665 Msa0057260:CDS 35.0%
ATGTGCTTAAAGTTCAACCA+GGG - chr1_2:13227647-13227666 Msa0057260:CDS 35.0%
AGAAAATGGCATCAAAGGAG+AGG - chr1_2:13212469-13212488 Msa0057260:CDS 40.0%
! GGCAAAAGGTGTGAAGAAAT+TGG - chr1_2:13212616-13212635 Msa0057260:CDS 40.0%
GTCACACTGATACTTCACAA+TGG - chr1_2:13212780-13212799 Msa0057260:CDS 40.0%
AAGTGCTCAATGTTCAACCT+GGG - chr1_2:13212825-13212844 Msa0057260:CDS 40.0%
AAACAACATGATCCTGTGGA+AGG + chr1_2:13212871-13212890 None:intergenic 40.0%
TTCCACAGGATCATGTTGTT+TGG - chr1_2:13212870-13212889 Msa0057260:CDS 40.0%
! TCCACAGGATCATGTTGTTT+GGG - chr1_2:13212871-13212890 Msa0057260:CDS 40.0%
GCAACGATTCAATACACTTG+CGG + chr1_2:13213235-13213254 None:intergenic 40.0%
GAGTTGAACCTTATGATAGG+TGG - chr1_2:13213433-13213452 Msa0057260:intron 40.0%
! GAGTTAATTTTCCCGTCGTT+AGG + chr1_2:13213774-13213793 None:intergenic 40.0%
!! CTTTTGCGGGTTATGACTTT+TGG + chr1_2:13213894-13213913 None:intergenic 40.0%
TGTTTACATATAGGGACGGA+GGG + chr1_2:13214177-13214196 None:intergenic 40.0%
ATGTTTACATATAGGGACGG+AGG + chr1_2:13214178-13214197 None:intergenic 40.0%
!! CCCTATAATAAAAGGGTGCT+TGG - chr1_2:13214203-13214222 Msa0057260:intron 40.0%
! GGGGGAGTATATATAGTCTT+GGG - chr1_2:13214236-13214255 Msa0057260:intron 40.0%
CGAAATTACAGTATGGCAAC+CGG + chr1_2:13214289-13214308 None:intergenic 40.0%
! CTAAAATTTAGGATCAGGGG+TGG - chr1_2:13214785-13214804 Msa0057260:intron 40.0%
!!! ACCGAACCTGACCTTTTTTT+TGG - chr1_2:13214933-13214952 Msa0057260:intron 40.0%
GTCATAATGCATCTTCTGAG+AGG - chr1_2:13215063-13215082 Msa0057260:intron 40.0%
GATTGTTTGGCTACTATCAC+CGG - chr1_2:13215161-13215180 Msa0057260:intron 40.0%
TCATCAAACTCTGCTTCCAT+CGG - chr1_2:13215778-13215797 Msa0057260:intron 40.0%
!! GTTACCGTTTGGTTCGTTTT+CGG - chr1_2:13215968-13215987 Msa0057260:intron 40.0%
CTCAAAATGCATCTCCCTTT+AGG + chr1_2:13216483-13216502 None:intergenic 40.0%
! GAAGTAATTTTGTACTCCCC+CGG - chr1_2:13216509-13216528 Msa0057260:intron 40.0%
CCCCGGTCTTGATTATTATA+AGG - chr1_2:13216526-13216545 Msa0057260:intron 40.0%
ATGGACTTCCAGTAATACTG+AGG + chr1_2:13217145-13217164 None:intergenic 40.0%
! TCAGTAATGGCTTTTGGCAT+TGG + chr1_2:13217181-13217200 None:intergenic 40.0%
AGGGTGTAGAAGATCAGTAA+TGG + chr1_2:13217194-13217213 None:intergenic 40.0%
ATTACTGATCTTCTACACCC+TGG - chr1_2:13217193-13217212 Msa0057260:intron 40.0%
CGAAATTGGGAGCAATAAGT+AGG - chr1_2:13217294-13217313 Msa0057260:intron 40.0%
TTCAGTTCAAACTCGTACGT+AGG + chr1_2:13217622-13217641 None:intergenic 40.0%
GTAGATGTTGGAGTCAGAAA+AGG - chr1_2:13217989-13218008 Msa0057260:intron 40.0%
TGTGAAGCAAATGGCATCAA+AGG - chr1_2:13218340-13218359 Msa0057260:intron 40.0%
! TGAAGCTGTTTCAACAGAAG+TGG - chr1_2:13218435-13218454 Msa0057260:intron 40.0%
GTTTCCATCAACACATTCCA+AGG + chr1_2:13218614-13218633 None:intergenic 40.0%
! GGAATGTGTTGATGGAAACA+TGG - chr1_2:13218615-13218634 Msa0057260:intron 40.0%
CATGAGCTTAAAGTTCAACC+TGG - chr1_2:13218700-13218719 Msa0057260:intron 40.0%
TGACAAATAGGAATAGTCCC+AGG + chr1_2:13218721-13218740 None:intergenic 40.0%
! TGATGATGCAGTAGTGTATG+TGG - chr1_2:13218922-13218941 Msa0057260:intron 40.0%
CAGTAGTGTATGTGGAAAGT+AGG - chr1_2:13218930-13218949 Msa0057260:intron 40.0%
AAATAATGGTGGTAAGGAGG+GGG + chr1_2:13219418-13219437 None:intergenic 40.0%
GAAATAATGGTGGTAAGGAG+GGG + chr1_2:13219419-13219438 None:intergenic 40.0%
GGAAATAATGGTGGTAAGGA+GGG + chr1_2:13219420-13219439 None:intergenic 40.0%
GATGGGAAATAATGGTGGTA+AGG + chr1_2:13219424-13219443 None:intergenic 40.0%
!! AGGATGATGGGAAATAATGG+TGG + chr1_2:13219429-13219448 None:intergenic 40.0%
TTGGTTGTGATGAGGATGAT+GGG + chr1_2:13219441-13219460 None:intergenic 40.0%
TTTGGTTGTGATGAGGATGA+TGG + chr1_2:13219442-13219461 None:intergenic 40.0%
! AAGGTCTTGTACCGAGATTT+CGG - chr1_2:13219482-13219501 Msa0057260:intron 40.0%
GTTTCTCTGGTGTATTGTGT+CGG + chr1_2:13219633-13219652 None:intergenic 40.0%
AACTGAATCAAAGAGGAAGG+AGG + chr1_2:13219667-13219686 None:intergenic 40.0%
CTGAACTGAATCAAAGAGGA+AGG + chr1_2:13219670-13219689 None:intergenic 40.0%
ATGGCTGAACTGAATCAAAG+AGG + chr1_2:13219674-13219693 None:intergenic 40.0%
ATATTACCAACTTGGAGTGG+AGG + chr1_2:13219716-13219735 None:intergenic 40.0%
CACAACAACACCAACATAAG+AGG + chr1_2:13219750-13219769 None:intergenic 40.0%
!! CTCTTATGTTGGTGTTGTTG+TGG - chr1_2:13219748-13219767 Msa0057260:intron 40.0%
AAATGTTGCGATGCAGATTG+CGG + chr1_2:13219990-13220009 None:intergenic 40.0%
!! GTCATTGTTGATAACGATGG+TGG + chr1_2:13220071-13220090 None:intergenic 40.0%
!! GTGGTCATTGTTGATAACGA+TGG + chr1_2:13220074-13220093 None:intergenic 40.0%
AGAAAGATGACGACAGAAGT+TGG - chr1_2:13220175-13220194 Msa0057260:intron 40.0%
CTGAACGAAAGATGAAAGTG+TGG - chr1_2:13220231-13220250 Msa0057260:intron 40.0%
ATACAGTGGTGTGATGATAG+TGG - chr1_2:13220313-13220332 Msa0057260:intron 40.0%
GAGAGATGGATATGAGAAGA+AGG - chr1_2:13220347-13220366 Msa0057260:intron 40.0%
GATGGATATGAGAAGAAGGT+TGG - chr1_2:13220351-13220370 Msa0057260:intron 40.0%
! GATATGAGAAGAAGGTTGGT+GGG - chr1_2:13220355-13220374 Msa0057260:intron 40.0%
CAAGTATGCTAAAGCGATGA+CGG - chr1_2:13220441-13220460 Msa0057260:intron 40.0%
GGAAAGAAGAGAGAGAAAGA+GGG - chr1_2:13220534-13220553 Msa0057260:intron 40.0%
GAAAGAAGAGAGAGAAAGAG+GGG - chr1_2:13220535-13220554 Msa0057260:intron 40.0%
AAAGAAGAGAGAGAAAGAGG+GGG - chr1_2:13220536-13220555 Msa0057260:intron 40.0%
AGATATGAGAGAGAGGGATA+TGG - chr1_2:13220813-13220832 Msa0057260:intron 40.0%
AGGGAGGTAAGATATAGAGA+GGG - chr1_2:13220899-13220918 Msa0057260:intron 40.0%
! AATTTATGCCTTAAGGGCAC+CGG + chr1_2:13221088-13221107 None:intergenic 40.0%
TCGGTGTGCAATTCATAAAC+TGG - chr1_2:13221439-13221458 Msa0057260:CDS 40.0%
CCGACAACACAACTAATTGT+TGG + chr1_2:13221546-13221565 None:intergenic 40.0%
AACCACCCATGTATGGTTAA+TGG - chr1_2:13222115-13222134 Msa0057260:intron 40.0%
TTCCATTAACCATACATGGG+TGG + chr1_2:13222120-13222139 None:intergenic 40.0%
TTTGTTTGGTCTCTAACGAG+TGG - chr1_2:13223356-13223375 Msa0057260:intron 40.0%
AACTCCAAACTCTCTCATTG+TGG - chr1_2:13223261-13223280 Msa0057260:intron 40.0%
TACTCCACAATGAGAGAGTT+TGG + chr1_2:13224112-13224131 None:intergenic 40.0%
! TATTTGCACTGCACTTGTTG+TGG + chr1_2:13224888-13224907 None:intergenic 40.0%
AAAACACTTGTGCTTTCGCA+CGG + chr1_2:13225124-13225143 None:intergenic 40.0%
GTACAGTAGAAAAATGACGG+TGG + chr1_2:13225185-13225204 None:intergenic 40.0%
CAGCACCCTAAGAAGAAATA+AGG - chr1_2:13225671-13225690 Msa0057260:intron 40.0%
TCGTCATTGCAAGTCAAGTT+AGG + chr1_2:13225711-13225730 None:intergenic 40.0%
!!! GATGCATGCACCTTTGTTTT+CGG - chr1_2:13225837-13225856 Msa0057260:intron 40.0%
AGGGACAAAACCGAAAACAA+AGG + chr1_2:13225850-13225869 None:intergenic 40.0%
TCAAATGTAGGTTGTGCAAG+TGG - chr1_2:13226133-13226152 Msa0057260:intron 40.0%
CAAATGTAGGTTGTGCAAGT+GGG - chr1_2:13226134-13226153 Msa0057260:intron 40.0%
AAATGTAGGTTGTGCAAGTG+GGG - chr1_2:13226135-13226154 Msa0057260:intron 40.0%
ATGGACTTCCAGTAAAGTTG+AGG + chr1_2:13226182-13226201 None:intergenic 40.0%
! TTAGTGATGGCTTTTGGCAT+TGG + chr1_2:13226218-13226237 None:intergenic 40.0%
! AGCAGATTAGTGATGGCTTT+TGG + chr1_2:13226224-13226243 None:intergenic 40.0%
AAAGCAAGGGATGTAAGCAA+TGG - chr1_2:13226911-13226930 Msa0057260:intron 40.0%
! ACCTCCTTCATATCCTTTTC+TGG + chr1_2:13226954-13226973 None:intergenic 40.0%
AGAAAAGGATATGAAGGAGG+TGG - chr1_2:13226953-13226972 Msa0057260:intron 40.0%
TGTGAAGCAAATGGCATCAA+AGG - chr1_2:13218340-13218359 Msa0057260:intron 40.0%
! TGAAGCTGTTTCAACAGAAG+TGG - chr1_2:13218435-13218454 Msa0057260:intron 40.0%
! GTTTACTATGTTGCTCTGGA+AGG - chr1_2:13227544-13227563 Msa0057260:CDS 40.0%
GTCACACTGATACATCACAA+TGG - chr1_2:13227602-13227621 Msa0057260:CDS 40.0%
TGACAAATAGGAACAATCCC+TGG + chr1_2:13227667-13227686 None:intergenic 40.0%
GTTTACTCTGTGCCTTTGGA+AGG - chr1_2:13212722-13212741 Msa0057260:CDS 45.0%
CTTCCATCAACACCTTCCAA+AGG + chr1_2:13212737-13212756 None:intergenic 45.0%
CAAGTGCTCAATGTTCAACC+TGG - chr1_2:13212824-13212843 Msa0057260:CDS 45.0%
TGTGGAAGGAAGTGACAAAC+TGG + chr1_2:13212857-13212876 None:intergenic 45.0%
! AGTTTGTCACTTCCTTCCAC+AGG - chr1_2:13212856-13212875 Msa0057260:CDS 45.0%
ACCCAAACAACATGATCCTG+TGG + chr1_2:13212875-13212894 None:intergenic 45.0%
CAGTCTTTCTGTTCGACACT+CGG + chr1_2:13213277-13213296 None:intergenic 45.0%
TAGGGGTTCCACCTATCATA+AGG + chr1_2:13213444-13213463 None:intergenic 45.0%
TCATCATGCATCCCTAACGA+CGG - chr1_2:13213759-13213778 Msa0057260:intron 45.0%
CCAACCTAGGAAACTTTCGT+TGG + chr1_2:13213830-13213849 None:intergenic 45.0%
CCAACGAAAGTTTCCTAGGT+TGG - chr1_2:13213827-13213846 Msa0057260:intron 45.0%
CAAGATAGGTGAACCAACCT+AGG + chr1_2:13213843-13213862 None:intergenic 45.0%
AAGTCGTAACCTTGTCACCT+AGG - chr1_2:13213942-13213961 Msa0057260:CDS 45.0%
AGCAGAATAGTTGTCTTGCC+AGG + chr1_2:13213998-13214017 None:intergenic 45.0%
! CGGGGGAGTATATATAGTCT+TGG - chr1_2:13214235-13214254 Msa0057260:intron 45.0%
!! GGTGATGGTTTTCCAGGAAA+TGG + chr1_2:13215102-13215121 None:intergenic 45.0%
!! ATTTGCGGTGATGGTTTTCC+AGG + chr1_2:13215108-13215127 None:intergenic 45.0%
! GATGTGTATGGGTTACCGTT+TGG - chr1_2:13215957-13215976 Msa0057260:intron 45.0%
TGGACCGAAAACGAACCAAA+CGG + chr1_2:13215975-13215994 None:intergenic 45.0%
GCGGTTCAATTCAGTTCATG+TGG + chr1_2:13215995-13216014 None:intergenic 45.0%
!!! AGGTGCATGCAGCCTTTTTT+TGG + chr1_2:13216758-13216777 None:intergenic 45.0%
TCAATTGCAGCTTGTGCTAG+TGG - chr1_2:13217096-13217115 Msa0057260:intron 45.0%
CAATTGCAGCTTGTGCTAGT+GGG - chr1_2:13217097-13217116 Msa0057260:intron 45.0%
GACTTCCAGTAATACTGAGG+TGG + chr1_2:13217142-13217161 None:intergenic 45.0%
!! GCTTTTGGCATTGGAGAGTT+GGG + chr1_2:13217172-13217191 None:intergenic 45.0%
GGAGCAATAAGTAGGTGTCT+GGG - chr1_2:13217302-13217321 Msa0057260:intron 45.0%
GAGCAATAAGTAGGTGTCTG+GGG - chr1_2:13217303-13217322 Msa0057260:intron 45.0%
TGAGCATAGCTCAGTTGACA+TGG + chr1_2:13217365-13217384 None:intergenic 45.0%
TGTCAACTGAGCTATGCTCA+TGG - chr1_2:13217365-13217384 Msa0057260:intron 45.0%
GTCAACTGAGCTATGCTCAT+GGG - chr1_2:13217366-13217385 Msa0057260:intron 45.0%
!! ATGATGGATGTAAGCAAGGG+TGG - chr1_2:13217965-13217984 Msa0057260:intron 45.0%
! GGAGTCAGAAAAGGGTATGA+AGG - chr1_2:13217998-13218017 Msa0057260:intron 45.0%
! GTCAGAAAAGGGTATGAAGG+AGG - chr1_2:13218001-13218020 Msa0057260:intron 45.0%
! AGAAAAGGGTATGAAGGAGG+TGG - chr1_2:13218004-13218023 Msa0057260:intron 45.0%
AGCAAATGGCATCAAAGGTG+AGG - chr1_2:13218345-13218364 Msa0057260:intron 45.0%
TGAAGTTTACTCTGTGCCCT+TGG - chr1_2:13218594-13218613 Msa0057260:intron 45.0%
GTCACGCTGATACATCAGAA+TGG - chr1_2:13218656-13218675 Msa0057260:intron 45.0%
TGTGGGAGGATGTGACAAAT+AGG + chr1_2:13218733-13218752 None:intergenic 45.0%
TATTTGTCACATCCTCCCAC+AGG - chr1_2:13218732-13218751 Msa0057260:intron 45.0%
AAACAACATGATCCTGTGGG+AGG + chr1_2:13218747-13218766 None:intergenic 45.0%
TCCCACAGGATCATGTTGTT+TGG - chr1_2:13218746-13218765 Msa0057260:intron 45.0%
CCCAAACAACATGATCCTGT+GGG + chr1_2:13212874-13212893 None:intergenic 45.0%
! CCCACAGGATCATGTTGTTT+GGG - chr1_2:13218747-13218766 Msa0057260:intron 45.0%
ACCCAAACAACATGATCCTG+TGG + chr1_2:13212875-13212894 None:intergenic 45.0%
GGGAAATAATGGTGGTAAGG+AGG + chr1_2:13219421-13219440 None:intergenic 45.0%
GGCTGTTACAAAACAGCCAT+GGG - chr1_2:13219503-13219522 Msa0057260:intron 45.0%
! CTGGTGTATTGTGTCGGTAA+CGG + chr1_2:13219627-13219646 None:intergenic 45.0%
AAGAGGAAGGAGGATGGTAA+CGG + chr1_2:13219657-13219676 None:intergenic 45.0%
GAATCAAAGAGGAAGGAGGA+TGG + chr1_2:13219663-13219682 None:intergenic 45.0%
AATCTCCCTCCCTCTTATGT+TGG - chr1_2:13219737-13219756 Msa0057260:intron 45.0%
CAACACCAACATAAGAGGGA+GGG + chr1_2:13219745-13219764 None:intergenic 45.0%
ACAACACCAACATAAGAGGG+AGG + chr1_2:13219746-13219765 None:intergenic 45.0%
! AACGATGGTGGTTGTGATCA+AGG + chr1_2:13220059-13220078 None:intergenic 45.0%
AAGATGACGACAGAAGTTGG+TGG - chr1_2:13220178-13220197 Msa0057260:intron 45.0%
GGATATGAGAAGAAGGTTGG+TGG - chr1_2:13220354-13220373 Msa0057260:intron 45.0%
CGTCATCGCTTTAGCATACT+TGG + chr1_2:13220443-13220462 None:intergenic 45.0%
AGGTGAGAGAAAGGAAACAC+TGG - chr1_2:13220509-13220528 Msa0057260:intron 45.0%
TGAGAGAAAGGAAACACTGG+AGG - chr1_2:13220512-13220531 Msa0057260:intron 45.0%
GAGAGAAAGGAAACACTGGA+GGG - chr1_2:13220513-13220532 Msa0057260:intron 45.0%
GGGAAAGAAGAGAGAGAAAG+AGG - chr1_2:13220533-13220552 Msa0057260:intron 45.0%
AAGAAGAGAGAGAAAGAGGG+GGG - chr1_2:13220537-13220556 Msa0057260:intron 45.0%
GAGAGATGGATGAGGGAAAA+AGG - chr1_2:13220772-13220791 Msa0057260:intron 45.0%
AGGGTGAGATATGAGAGAGA+GGG - chr1_2:13220807-13220826 Msa0057260:intron 45.0%
AGAGAGAGAGAGAGAGAGTT+AGG - chr1_2:13220861-13220880 Msa0057260:intron 45.0%
TTAGGAAAGAGAGCTAGCAG+AGG - chr1_2:13220879-13220898 Msa0057260:intron 45.0%
TAGGAAAGAGAGCTAGCAGA+GGG - chr1_2:13220880-13220899 Msa0057260:intron 45.0%
GAGGGAGGTAAGATATAGAG+AGG - chr1_2:13220898-13220917 Msa0057260:intron 45.0%
TCGGTAACACTAGATCCCTT+AGG - chr1_2:13221562-13221581 Msa0057260:intron 45.0%
CTTAGATCATACGGTCGAAC+CGG - chr1_2:13221726-13221745 Msa0057260:CDS 45.0%
CAACAACAACCACCCATGTA+TGG - chr1_2:13222108-13222127 Msa0057260:intron 45.0%
TGGTTAGATATAGGGACGGA+GGG + chr1_2:13222763-13222782 None:intergenic 45.0%
TGGGTGGTTAGATATAGGGA+CGG + chr1_2:13222767-13222786 None:intergenic 45.0%
CGACAGGAGAAAGTCTATCA+TGG - chr1_2:13223033-13223052 Msa0057260:intron 45.0%
TCCATGCAAGAATGCCTCAA+GGG - chr1_2:13223206-13223225 Msa0057260:intron 45.0%
AAACACTTGTGCTTTCGCAC+GGG + chr1_2:13225123-13225142 None:intergenic 45.0%
!! CTTCTTAGGGTGCTGTTAAC+TGG + chr1_2:13225666-13225685 None:intergenic 45.0%
TCAGCTTCACTGATCCAACA+TGG - chr1_2:13225954-13225973 Msa0057260:intron 45.0%
GACTTCCAGTAAAGTTGAGG+TGG + chr1_2:13226179-13226198 None:intergenic 45.0%
!! GCTTTTGGCATTGGAGAGTT+GGG + chr1_2:13217172-13217191 None:intergenic 45.0%
AGGGTGTAGCAGATTAGTGA+TGG + chr1_2:13226231-13226250 None:intergenic 45.0%
ATCACTAATCTGCTACACCC+TGG - chr1_2:13226230-13226249 Msa0057260:intron 45.0%
CATTGCGTGAATAGTGCATG+TGG - chr1_2:13226604-13226623 Msa0057260:intron 45.0%
GGAGCCAGAAAAGGATATGA+AGG - chr1_2:13226947-13226966 Msa0057260:intron 45.0%
GCCAGAAAAGGATATGAAGG+AGG - chr1_2:13226950-13226969 Msa0057260:intron 45.0%
AGCAAATGGCATCAAAGGTG+AGG - chr1_2:13218345-13218364 Msa0057260:intron 45.0%
TGTGGGAGGATGTGACAAAT+AGG + chr1_2:13218733-13218752 None:intergenic 45.0%
TATTTGTCACATCCTCCCAC+AGG - chr1_2:13218732-13218751 Msa0057260:intron 45.0%
AAACAACATGATCCTGTGGG+AGG + chr1_2:13218747-13218766 None:intergenic 45.0%
TCCCACAGGATCATGTTGTT+TGG - chr1_2:13218746-13218765 Msa0057260:intron 45.0%
CCCAAACAACATGATCCTGT+GGG + chr1_2:13212874-13212893 None:intergenic 45.0%
! CCCACAGGATCATGTTGTTT+GGG - chr1_2:13218747-13218766 Msa0057260:intron 45.0%
ACCCAAACAACATGATCCTG+TGG + chr1_2:13212875-13212894 None:intergenic 45.0%
!! TAAATAATGAATTTAAATAA+TGG + chr1_2:13215632-13215651 None:intergenic 5.0%
!! GTAAAAAAAAAAAAAAAAAT+CGG + chr1_2:13215900-13215919 None:intergenic 5.0%
!!! AAGTTTTTAAATATTATTTA+TGG - chr1_2:13217846-13217865 Msa0057260:intron 5.0%
!!! TTTTTTTAAAAAAAAAACTT+TGG + chr1_2:13219460-13219479 None:intergenic 5.0%
!! TATATATATATATATATGAT+GGG + chr1_2:13221844-13221863 None:intergenic 5.0%
!! ATATATATATATATATATGA+TGG + chr1_2:13221845-13221864 None:intergenic 5.0%
!! AATTTATAATAAAAATATCT+TGG - chr1_2:13222637-13222656 Msa0057260:intron 5.0%
!! AAAAAATTGATATTATAAAA+TGG + chr1_2:13224648-13224667 None:intergenic 5.0%
!!! TTTTTATTTATTTTTTTGAA+GGG + chr1_2:13225291-13225310 None:intergenic 5.0%
!!! ATTTTTATTTATTTTTTTGA+AGG + chr1_2:13225292-13225311 None:intergenic 5.0%
!! GTGCCTTTGGAAGGTGTTGA+TGG - chr1_2:13212731-13212750 Msa0057260:CDS 50.0%
TGACAAACTGGAACAGTCCC+AGG + chr1_2:13212845-13212864 None:intergenic 50.0%
CATCATGCATCCCTAACGAC+GGG - chr1_2:13213760-13213779 Msa0057260:intron 50.0%
GGCTCCAACGAAAGTTTCCT+AGG - chr1_2:13213823-13213842 Msa0057260:intron 50.0%
CGTAACCTTGTCACCTAGGA+AGG - chr1_2:13213946-13213965 Msa0057260:CDS 50.0%
GAGTACCTTCCTAGGTGACA+AGG + chr1_2:13213954-13213973 None:intergenic 50.0%
TCGCGAGGTAAACAATTGCC+TGG - chr1_2:13213977-13213996 Msa0057260:intron 50.0%
! AGGGTGCTTGGATATAGGGA+CGG - chr1_2:13214215-13214234 Msa0057260:intron 50.0%
GAAGTCAAGGGGAGTTCCTT+AGG + chr1_2:13214766-13214785 None:intergenic 50.0%
! AATTTAGGATCAGGGGTGGG+TGG - chr1_2:13214789-13214808 Msa0057260:intron 50.0%
CAAACTCTGCTTCCATCGGA+CGG - chr1_2:13215782-13215801 Msa0057260:intron 50.0%
AATACCGGGTTCGATTCCCA+GGG - chr1_2:13216243-13216262 Msa0057260:intron 50.0%
CATTGGAGAGTTGGGAAGCA+TGG + chr1_2:13217164-13217183 None:intergenic 50.0%
!! GGCTTTTGGCATTGGAGAGT+TGG + chr1_2:13217173-13217192 None:intergenic 50.0%
GGGAGCAATAAGTAGGTGTC+TGG - chr1_2:13217301-13217320 Msa0057260:intron 50.0%
AGCAAGGGTGGTGTAGATGT+TGG - chr1_2:13217977-13217996 Msa0057260:intron 50.0%
GTGCCCTTGGAATGTGTTGA+TGG - chr1_2:13218607-13218626 Msa0057260:intron 50.0%
CGGCTGTTACAAAACAGCCA+TGG - chr1_2:13219502-13219521 Msa0057260:intron 50.0%
TAGCATCCTCCACTCCAAGT+TGG - chr1_2:13219707-13219726 Msa0057260:intron 50.0%
!! CATGTTGGTTCTCTGAGACG+TGG + chr1_2:13220096-13220115 None:intergenic 50.0%
ACCACCATCGTCATCACTAG+TGG + chr1_2:13220257-13220276 None:intergenic 50.0%
! AGTGATGACGATGGTGGTTG+TGG - chr1_2:13220259-13220278 Msa0057260:intron 50.0%
! GTGATGACGATGGTGGTTGT+GGG - chr1_2:13220260-13220279 Msa0057260:intron 50.0%
! TGATGACGATGGTGGTTGTG+GGG - chr1_2:13220261-13220280 Msa0057260:intron 50.0%
! GGTGGTGGTTGTAGATACAG+TGG - chr1_2:13220299-13220318 Msa0057260:intron 50.0%
!! CAGTGGTGTGATGATAGTGG+TGG - chr1_2:13220316-13220335 Msa0057260:intron 50.0%
!! TGGTGTGATGATAGTGGTGG+CGG - chr1_2:13220319-13220338 Msa0057260:intron 50.0%
!! ATGAGAAGAAGGTTGGTGGG+TGG - chr1_2:13220358-13220377 Msa0057260:intron 50.0%
TCTGAGGAGAGGGATGATGA+TGG - chr1_2:13220413-13220432 Msa0057260:intron 50.0%
TGGAGTGAGAGAGATGGATG+AGG - chr1_2:13220764-13220783 Msa0057260:intron 50.0%
GGAGTGAGAGAGATGGATGA+GGG - chr1_2:13220765-13220784 Msa0057260:intron 50.0%
GAGGGTGAGATATGAGAGAG+AGG - chr1_2:13220806-13220825 Msa0057260:intron 50.0%
AATGCTAACCGGTGCCCTTA+AGG - chr1_2:13221077-13221096 Msa0057260:intron 50.0%
AGTCATTCAAACGCACCGTG+TGG - chr1_2:13221401-13221420 Msa0057260:CDS 50.0%
GTGGTTAGATATAGGGACGG+AGG + chr1_2:13222764-13222783 None:intergenic 50.0%
GGGAGGTTACATTAAGCGAC+AGG - chr1_2:13223017-13223036 Msa0057260:intron 50.0%
GTCCATGCAAGAATGCCTCA+AGG - chr1_2:13223205-13223224 Msa0057260:intron 50.0%
! TCCCTTGAGGCATTCTTGCA+TGG + chr1_2:13223210-13223229 None:intergenic 50.0%
AAGAATGCCTCAAGGGACAG+AGG - chr1_2:13223213-13223232 Msa0057260:intron 50.0%
AGAATGCCTCAAGGGACAGA+GGG - chr1_2:13223214-13223233 Msa0057260:intron 50.0%
AAGGTCCGGGGTTCAAACTT+CGG - chr1_2:13223827-13223846 Msa0057260:intron 50.0%
AGTTGCCGAAGTTTGAACCC+CGG + chr1_2:13223835-13223854 None:intergenic 50.0%
GCACGGGTCATGTAACATTG+TGG + chr1_2:13225107-13225126 None:intergenic 50.0%
GTTACTTAACCAGTGCCCCA+AGG - chr1_2:13225638-13225657 Msa0057260:intron 50.0%
TGCTGTTAACTGGTGCCTTG+GGG + chr1_2:13225656-13225675 None:intergenic 50.0%
! GTGCTGTTAACTGGTGCCTT+GGG + chr1_2:13225657-13225676 None:intergenic 50.0%
CATTGGAGAGTTGGGAAGCA+TGG + chr1_2:13217164-13217183 None:intergenic 50.0%
!! GGCTTTTGGCATTGGAGAGT+TGG + chr1_2:13217173-13217192 None:intergenic 50.0%
GCAAGGGATGTAAGCAATGG+TGG - chr1_2:13226914-13226933 Msa0057260:intron 50.0%
!! GTTGCTCTGGAAGGTGTTGA+TGG - chr1_2:13227553-13227572 Msa0057260:CDS 50.0%
!! CTGGAAGGTGTTGATGGAAG+TGG - chr1_2:13227559-13227578 Msa0057260:CDS 50.0%
GGGTGCTTGGATATAGGGAC+GGG - chr1_2:13214216-13214235 Msa0057260:intron 55.0%
GGTGCTTGGATATAGGGACG+GGG - chr1_2:13214217-13214236 Msa0057260:intron 55.0%
GTGCTTGGATATAGGGACGG+GGG - chr1_2:13214218-13214237 Msa0057260:intron 55.0%
CCACTGGAGCCCAAACAACT+TGG + chr1_2:13216192-13216211 None:intergenic 55.0%
CCAAGTTGTTTGGGCTCCAG+TGG - chr1_2:13216189-13216208 Msa0057260:intron 55.0%
TTGTTTGGGCTCCAGTGGCA+AGG - chr1_2:13216194-13216213 Msa0057260:intron 55.0%
TGGCAAGGAGCTCCTTCCAA+GGG - chr1_2:13216209-13216228 Msa0057260:intron 55.0%
AATCGAACCCGGTATTCCCC+GGG + chr1_2:13216239-13216258 None:intergenic 55.0%
GAATCGAACCCGGTATTCCC+CGG + chr1_2:13216240-13216259 None:intergenic 55.0%
GAATACCGGGTTCGATTCCC+AGG - chr1_2:13216242-13216261 Msa0057260:intron 55.0%
ATACCGGGTTCGATTCCCAG+GGG - chr1_2:13216244-13216263 Msa0057260:intron 55.0%
! CTAATCCGGCTTGTGCGTAG+AGG + chr1_2:13216295-13216314 None:intergenic 55.0%
GTTTCCGACTCACCAAAGGC+GGG + chr1_2:13216321-13216340 None:intergenic 55.0%
GGTTTCCGACTCACCAAAGG+CGG + chr1_2:13216322-13216341 None:intergenic 55.0%
GCCTTTGGTGAGTCGGAAAC+CGG - chr1_2:13216321-13216340 Msa0057260:intron 55.0%
! ACCGGTTTCCGACTCACCAA+AGG + chr1_2:13216325-13216344 None:intergenic 55.0%
AATGGTGGTAAGGAGGGGGA+TGG + chr1_2:13219414-13219433 None:intergenic 55.0%
ACAAAACAGCCATGGGCTCC+CGG - chr1_2:13219510-13219529 Msa0057260:intron 55.0%
!! AAAAAGGTACCGGGAGCCCA+TGG + chr1_2:13219522-13219541 None:intergenic 55.0%
!! GGATGGTAACGGCGTTTCTC+TGG + chr1_2:13219646-13219665 None:intergenic 55.0%
GATGCAGATTGCGGTTGTCG+CGG + chr1_2:13219981-13220000 None:intergenic 55.0%
!! GTTGGTTCTCTGAGACGTGG+TGG + chr1_2:13220093-13220112 None:intergenic 55.0%
!! AGTTGGTGGTGATGATGCCG+CGG - chr1_2:13220192-13220211 Msa0057260:intron 55.0%
! GTGGCCACTAGTGATGACGA+TGG - chr1_2:13220250-13220269 Msa0057260:intron 55.0%
! GCCACTAGTGATGACGATGG+TGG - chr1_2:13220253-13220272 Msa0057260:intron 55.0%
! GATGACGATGGTGGTTGTGG+GGG - chr1_2:13220262-13220281 Msa0057260:intron 55.0%
! ATGACGATGGTGGTTGTGGG+GGG - chr1_2:13220263-13220282 Msa0057260:intron 55.0%
!! TGTGATGATAGTGGTGGCGG+TGG - chr1_2:13220322-13220341 Msa0057260:intron 55.0%
!! GTGATGATAGTGGTGGCGGT+GGG - chr1_2:13220323-13220342 Msa0057260:intron 55.0%
!! AGAAGAAGGTTGGTGGGTGG+TGG - chr1_2:13220361-13220380 Msa0057260:intron 55.0%
! GCTAAAGCGATGACGGTCGT+CGG - chr1_2:13220448-13220467 Msa0057260:intron 55.0%
!! AGAGAGGAGTGGTGGATGGT+TGG - chr1_2:13220478-13220497 Msa0057260:intron 55.0%
!! AGGAGTGGTGGATGGTTGGT+GGG - chr1_2:13220482-13220501 Msa0057260:intron 55.0%
GAGGGATGGAGTGAGAGAGA+TGG - chr1_2:13220758-13220777 Msa0057260:intron 55.0%
GAAAGAGAGCTAGCAGAGGG+AGG - chr1_2:13220883-13220902 Msa0057260:intron 55.0%
TCTACTCCCTCTGTCCCTTG+AGG + chr1_2:13223223-13223242 None:intergenic 55.0%
CATCGTGAGCTTAGCTCAGC+TGG - chr1_2:13223781-13223800 Msa0057260:intron 55.0%
GTGAGCTTAGCTCAGCTGGT+TGG - chr1_2:13223785-13223804 Msa0057260:intron 55.0%
!! GGTGCTGTTAACTGGTGCCT+TGG + chr1_2:13225658-13225677 None:intergenic 55.0%
GGATATGAAGGAGGTGGCAC+TGG - chr1_2:13226959-13226978 Msa0057260:intron 55.0%
CTCTGCTTCCATCGGACGGT+CGG - chr1_2:13215786-13215805 Msa0057260:intron 60.0%
TGGAAGGAGCTCCTTGCCAC+TGG + chr1_2:13216208-13216227 None:intergenic 60.0%
GTGGCAAGGAGCTCCTTCCA+AGG - chr1_2:13216208-13216227 Msa0057260:intron 60.0%
TACCGGGTTCGATTCCCAGG+GGG - chr1_2:13216245-13216264 Msa0057260:intron 60.0%
TTCCCCCTGGGAATCGAACC+CGG + chr1_2:13216250-13216269 None:intergenic 60.0%
TTCCCAGGGGGAACAACGCT+TGG - chr1_2:13216257-13216276 Msa0057260:intron 60.0%
GCATGCCTCTACGCACAAGC+CGG - chr1_2:13216287-13216306 Msa0057260:intron 60.0%
CCAAAGGCGGGCGACTAATC+CGG + chr1_2:13216309-13216328 None:intergenic 60.0%
!! AGAAGGTTGGTGGGTGGTGG+TGG - chr1_2:13220364-13220383 Msa0057260:intron 60.0%
! AAAGCGATGACGGTCGTCGG+TGG - chr1_2:13220451-13220470 Msa0057260:intron 60.0%
! TCGGAGAGAGGAGTGGTGGA+TGG - chr1_2:13220474-13220493 Msa0057260:intron 60.0%
!! GAGGAGTGGTGGATGGTTGG+TGG - chr1_2:13220481-13220500 Msa0057260:intron 60.0%
!! AGTGGTGGATGGTTGGTGGG+TGG - chr1_2:13220485-13220504 Msa0057260:intron 60.0%
!! GTGGTGGATGGTTGGTGGGT+GGG - chr1_2:13220486-13220505 Msa0057260:intron 60.0%
GTGGGTGGGAGGTGAGAGAA+AGG - chr1_2:13220500-13220519 Msa0057260:intron 60.0%
TAACTGGTGCCTTGGGGCAC+TGG + chr1_2:13225650-13225669 None:intergenic 60.0%
CGCGACGCGAGTACCTTCCT+AGG + chr1_2:13213962-13213981 None:intergenic 65.0%
!! AGGAAGGTACTCGCGTCGCG+AGG - chr1_2:13213962-13213981 Msa0057260:CDS 65.0%
! TGGTTTGGCCGACCGTCCGA+TGG + chr1_2:13215797-13215816 None:intergenic 65.0%
! GCTCCTTCCAAGGGCGTACC+CGG - chr1_2:13216218-13216237 Msa0057260:intron 65.0%
! CTCCTTCCAAGGGCGTACCC+GGG - chr1_2:13216219-13216238 Msa0057260:intron 65.0%
! TCCTTCCAAGGGCGTACCCG+GGG - chr1_2:13216220-13216239 Msa0057260:intron 65.0%
GTATTCCCCGGGTACGCCCT+TGG + chr1_2:13216228-13216247 None:intergenic 65.0%
AGGGCGTACCCGGGGAATAC+CGG - chr1_2:13216228-13216247 Msa0057260:intron 65.0%
! GGCCAAGCGTTGTTCCCCCT+GGG + chr1_2:13216262-13216281 None:intergenic 65.0%
! TGGCCAAGCGTTGTTCCCCC+TGG + chr1_2:13216263-13216282 None:intergenic 65.0%
! GTGCGTAGAGGCATGCGCAC+TGG + chr1_2:13216283-13216302 None:intergenic 65.0%
!! CCGGATTAGTCGCCCGCCTT+TGG - chr1_2:13216306-13216325 Msa0057260:intron 65.0%
GTCGCCCGCCTTTGGTGAGT+CGG - chr1_2:13216314-13216333 Msa0057260:intron 65.0%
GGTGGTAAGGAGGGGGATGG+CGG + chr1_2:13219411-13219430 None:intergenic 65.0%
! TGGTGGTGATGATGCCGCGG+TGG - chr1_2:13220195-13220214 Msa0057260:intron 65.0%
! TGGTGATGATGCCGCGGTGG+TGG - chr1_2:13220198-13220217 Msa0057260:intron 65.0%
! TGATGATGCCGCGGTGGTGG+AGG - chr1_2:13220201-13220220 Msa0057260:intron 65.0%
GATCTGGACCTCCACCACCG+CGG + chr1_2:13220212-13220231 None:intergenic 65.0%
! ACGATGGTGGTTGTGGGGGG+TGG - chr1_2:13220266-13220285 Msa0057260:intron 65.0%
! CGATGGTGGTTGTGGGGGGT+GGG - chr1_2:13220267-13220286 Msa0057260:intron 65.0%
! GGTGGGAGCTCAGATGGTGG+TGG - chr1_2:13220284-13220303 Msa0057260:intron 65.0%
!! TGGTGGCGGTGGGTGAGAGA+TGG - chr1_2:13220333-13220352 Msa0057260:intron 65.0%
!! AGGTTGGTGGGTGGTGGTGG+TGG - chr1_2:13220367-13220386 Msa0057260:intron 65.0%
!! TTGGTGGGTGGTGGTGGTGG+TGG - chr1_2:13220370-13220389 Msa0057260:intron 65.0%
! CGATGACGGTCGTCGGTGGT+CGG - chr1_2:13220455-13220474 Msa0057260:intron 65.0%
TCGGTGGTCGGAGAGAGGAG+TGG - chr1_2:13220467-13220486 Msa0057260:intron 65.0%
GTGGTCGGAGAGAGGAGTGG+TGG - chr1_2:13220470-13220489 Msa0057260:intron 65.0%
!! GTGGATGGTTGGTGGGTGGG+AGG - chr1_2:13220489-13220508 Msa0057260:intron 65.0%
TCCCCGGGTACGCCCTTGGA+AGG + chr1_2:13216224-13216243 None:intergenic 70.0%
GGGCGTACCCGGGGAATACC+GGG - chr1_2:13216229-13216248 Msa0057260:intron 70.0%
GTGGGGGGTGGGAGCTCAGA+TGG - chr1_2:13220278-13220297 Msa0057260:intron 70.0%
GGGGGTGGGAGCTCAGATGG+TGG - chr1_2:13220281-13220300 Msa0057260:intron 70.0%
!! GTGGGTGGTGGTGGTGGTGG+TGG - chr1_2:13220373-13220392 Msa0057260:intron 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - chr1_2:13220376-13220395 Msa0057260:intron 70.0%
GGTCGTCGGTGGTCGGAGAG+AGG - chr1_2:13220462-13220481 Msa0057260:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 13212404 13227726 13212404 ID=Msa0057260;Name=Msa0057260
chr1_2 mRNA 13212404 13227726 13212404 ID=Msa0057260-mRNA-1;Parent=Msa0057260;Name=Msa0057260-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0|1|0.28|0.37|8|0|657
chr1_2 exon 13227537 13227726 13227537 ID=Msa0057260-mRNA-1:exon:5186;Parent=Msa0057260-mRNA-1
chr1_2 exon 13227274 13227506 13227274 ID=Msa0057260-mRNA-1:exon:5185;Parent=Msa0057260-mRNA-1
chr1_2 exon 13222916 13223024 13222916 ID=Msa0057260-mRNA-1:exon:5184;Parent=Msa0057260-mRNA-1
chr1_2 exon 13222119 13222194 13222119 ID=Msa0057260-mRNA-1:exon:5183;Parent=Msa0057260-mRNA-1
chr1_2 exon 13221658 13221905 13221658 ID=Msa0057260-mRNA-1:exon:5182;Parent=Msa0057260-mRNA-1
chr1_2 exon 13221371 13221543 13221371 ID=Msa0057260-mRNA-1:exon:5181;Parent=Msa0057260-mRNA-1
chr1_2 exon 13213879 13213987 13213879 ID=Msa0057260-mRNA-1:exon:5180;Parent=Msa0057260-mRNA-1
chr1_2 exon 13212404 13213239 13212404 ID=Msa0057260-mRNA-1:exon:5179;Parent=Msa0057260-mRNA-1
chr1_2 CDS 13227537 13227726 13227537 ID=Msa0057260-mRNA-1:cds;Parent=Msa0057260-mRNA-1
chr1_2 CDS 13227274 13227506 13227274 ID=Msa0057260-mRNA-1:cds;Parent=Msa0057260-mRNA-1
chr1_2 CDS 13222916 13223024 13222916 ID=Msa0057260-mRNA-1:cds;Parent=Msa0057260-mRNA-1
chr1_2 CDS 13222119 13222194 13222119 ID=Msa0057260-mRNA-1:cds;Parent=Msa0057260-mRNA-1
chr1_2 CDS 13221658 13221905 13221658 ID=Msa0057260-mRNA-1:cds;Parent=Msa0057260-mRNA-1
chr1_2 CDS 13221371 13221543 13221371 ID=Msa0057260-mRNA-1:cds;Parent=Msa0057260-mRNA-1
chr1_2 CDS 13213879 13213987 13213879 ID=Msa0057260-mRNA-1:cds;Parent=Msa0057260-mRNA-1
chr1_2 CDS 13212404 13213239 13212404 ID=Msa0057260-mRNA-1:cds;Parent=Msa0057260-mRNA-1
Gene Sequence

>Msa0057260

ATGTTCTCCATCAAAGAAGGAACAGAAGAATCTGAAATTGTGAAGAACACAATAAGTGAGTGTGAAGAAAATGGCATCAAAGGAGAGGAAAAGCTTTGTGTGACATCATTGGAATCTATGGTTGATTTCACTACTTCGAAACTTGGAAACAATGTTGAAGCTGTCTCAACAGAAGTGAAAAAAGAAAGCAGTGTGAAGAAATTGGGAGAGAAGAATAAAGCTGTAGTGTGTCACAAAGAGAATTACCCTTATGCAGTTTTTTACTGTCATAAAACAGATTCAATTAAAGTTTACTCTGTGCCTTTGGAAGGTGTTGATGGAAGCCGAGTTAAAGCTGTTGTTGTGTGTCACACTGATACTTCACAATGGAATCCTAAACATTTGGCTTTTCAAGTGCTCAATGTTCAACCTGGGACTGTTCCACTTGTGCTAGTGGGAACAAATGCTGCAATATTTCCACCTCAGTATTACTGGAAGTCCATGCTTCCCAACTCTCCAATGCCAAAAGCCATTACTGATCTTCTACACCCTGCTGGATATTGGAGTAAAGAGAAAGCAACAATGATGGATGTAAGCAAGGGTGGTGTAGATGTTGGAGTCAGAAAAGGAAAAGTTGCTAATTCCATACCGTTTTCATCAATCAAATTGGAAAACATATTCAACAAGTTTTCCATCAAAGAAGGATCAAAGGAAGCTGAAATTGTGAAGAGAACAATAAGTGAGTGTGAAGCAAATGGCATCAAAGGTGAGGAAAAGCTTTGTGTAACATCATTGGAATCTATGGTTGATTTCACTATTTCAAAACTCGGAAACAATGTTGAAGCTGTTTCAACAGAAGTGGATAAAAATAGTAATGATTCAACTGAAGTTTACTCTGTGCCCTTGGAATGTGTTGATGGAAACATGGTTAAAACTATTGTTGTTTGTCACGCTGATACATCAGAATGGAATCCTAAATATTATGCTTTTCATGAGCTTAAAGTTCAACCTGGGACTATTCCTATTTGTCACATCCTCCCACAGGATCATGTTGTGCAAGTGGGGACTAATGCTGCAATATTACCACCTCAACTTTACTGGAAGTCCATGCTTCCCAACTCTCCAATGCCAAAAGCCATCACTAATCTGCTACACCCTGCTGAATATTGGAGTAATGAGAAAGCAAGGGATGTAAGCAATGGTGGTTTAAATGTTGGAGCCAGAAAAGGATATGAAGGAGGTGGCACTGGTCTGAATGATGAAAAGCTTCCATTTTTTTACTTTTATCCTATAGTATTCAATGAGAGTCAAATTCAATTACATGATAAACAAAATGTAACACTTTTCTTCTTGAAAAAAGATTTGCATCATGGAACAAAATTGAACTTGCAATTTAGAGAAACAACTTCAAATAATAATGGAACAAAATTCTTGCCTAGAGAAGTTGCTAATTCCATACCCTTTTCATCAATCAAATTGGAAAACATACTCAACAAGTTTTCCATCAAAGAAGGATCAAAGGAAGCTGAAATTGTGAAGAGAACATTAAGTGAGTGTGAAGCAAATGGCATCAAAGGTGAGGAAAAGCTTTGTGTAACATCATTGGAATCTATGGTTGATTTCACTATTTCGAAACTCGGAAACAATGTTGAAGCTGTTTCAACAGAAGTGGATAAAAATAGTAATGGTTTGCAACAATATGTTATAGCAAAAGGAGTGAAGAAATTGGGTGATAAGAACAAAACTATTGTGTGTCACAAAGAGAATTACCCTTATGCAGTTTTTTACTGTCACAAAATAGATGCAACTGAAGTTTACTATGTTGCTCTGGAAGGTGTTGATGGAAGTGGAGTTAAATCTATTGTTGTTTGTCACACTGATACATCACAATGGAATCCTAAACATTTATCTTTTTATGTGCTTAAAGTTCAACCAGGGATTGTTCCTATTTGTCACATCCTCCCACAGGATCATGTTGTTTGGGTTTCCAATTGA
Protein sequence

>Msa0057260

MFSIKEGTEESEIVKNTISECEENGIKGEEKLCVTSLESMVDFTTSKLGNNVEAVSTEVKKESSVKKLGEKNKAVVCHKENYPYAVFYCHKTDSIKVYSVPLEGVDGSRVKAVVVCHTDTSQWNPKHLAFQVLNVQPGTVPLVLVGTNAAIFPPQYYWKSMLPNSPMPKAITDLLHPAGYWSKEKATMMDVSKGGVDVGVRKGKVANSIPFSSIKLENIFNKFSIKEGSKEAEIVKRTISECEANGIKGEEKLCVTSLESMVDFTISKLGNNVEAVSTEVDKNSNDSTEVYSVPLECVDGNMVKTIVVCHADTSEWNPKYYAFHELKVQPGTIPICHILPQDHVVQVGTNAAILPPQLYWKSMLPNSPMPKAITNLLHPAEYWSNEKARDVSNGGLNVGARKGYEGGGTGLNDEKLPFFYFYPIVFNESQIQLHDKQNVTLFFLKKDLHHGTKLNLQFRETTSNNNGTKFLPREVANSIPFSSIKLENILNKFSIKEGSKEAEIVKRTLSECEANGIKGEEKLCVTSLESMVDFTISKLGNNVEAVSTEVDKNSNGLQQYVIAKGVKKLGDKNKTIVCHKENYPYAVFYCHKIDATEVYYVALEGVDGSGVKSIVVCHTDTSQWNPKHLSFYVLKVQPGIVPICHILPQDHVVWVSN*