Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464700 | XP_013460928.1 | 92.532 | 616 | 45 | 1 | 4 | 619 | 8 | 622 | 0.0 | 1210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464700 | sp|Q5MAU8|PPA27_ARATH | 73.322 | 611 | 157 | 3 | 9 | 619 | 6 | 610 | 0.0 | 947 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464700 | A0A072UZJ4 | 92.532 | 616 | 45 | 1 | 4 | 619 | 8 | 622 | 0.0 | 1210 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0464700 | Msa0510150 | 0.878751 | 2.179875e-69 | -8.615850e-47 |
| Msa0357960 | Msa0464700 | 0.927775 | 7.341556e-92 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464700 | MtrunA17_Chr3g0116051 | 92.532 | 616 | 45 | 1 | 4 | 619 | 8 | 622 | 0.0 | 1210 |
| Msa0464700 | MtrunA17_Chr4g0057551 | 79.441 | 608 | 119 | 2 | 14 | 619 | 23 | 626 | 0.0 | 1041 |
| Msa0464700 | MtrunA17_Chr5g0419621 | 70.395 | 608 | 175 | 2 | 14 | 619 | 14 | 618 | 0.0 | 909 |
| Msa0464700 | MtrunA17_Chr8g0364481 | 69.106 | 615 | 183 | 2 | 5 | 619 | 4 | 611 | 0.0 | 909 |
| Msa0464700 | MtrunA17_Chr3g0116091 | 84.532 | 459 | 26 | 2 | 160 | 618 | 4 | 417 | 0.0 | 800 |
| Msa0464700 | MtrunA17_Chr3g0116071 | 75.235 | 319 | 10 | 2 | 156 | 474 | 4 | 253 | 7.34e-167 | 476 |
| Msa0464700 | MtrunA17_Chr4g0022251 | 34.797 | 615 | 327 | 20 | 38 | 600 | 42 | 634 | 4.55e-107 | 336 |
| Msa0464700 | MtrunA17_Chr3g0116081 | 97.778 | 135 | 3 | 0 | 486 | 620 | 1 | 135 | 6.00e-93 | 282 |
| Msa0464700 | MtrunA17_Chr1g0173511 | 36.989 | 465 | 257 | 14 | 132 | 574 | 34 | 484 | 1.18e-92 | 294 |
| Msa0464700 | MtrunA17_Chr4g0043001 | 28.454 | 608 | 352 | 23 | 42 | 598 | 5 | 580 | 1.83e-58 | 207 |
| Msa0464700 | MtrunA17_Chr4g0043021 | 28.289 | 608 | 356 | 22 | 40 | 598 | 4 | 580 | 2.10e-57 | 204 |
| Msa0464700 | MtrunA17_Chr7g0214261 | 95.455 | 66 | 3 | 0 | 196 | 261 | 6 | 71 | 3.82e-39 | 138 |
| Msa0464700 | MtrunA17_Chr1g0178831 | 27.229 | 415 | 228 | 15 | 189 | 593 | 57 | 407 | 8.38e-30 | 122 |
| Msa0464700 | MtrunA17_Chr7g0266131 | 25.908 | 413 | 228 | 15 | 189 | 589 | 65 | 411 | 3.60e-29 | 120 |
| Msa0464700 | MtrunA17_Chr4g0064541 | 26.190 | 462 | 277 | 16 | 160 | 602 | 35 | 451 | 7.41e-28 | 117 |
| Msa0464700 | MtrunA17_Chr7g0266151 | 25.791 | 411 | 232 | 13 | 189 | 589 | 58 | 405 | 1.29e-27 | 115 |
| Msa0464700 | MtrunA17_Chr3g0116061 | 84.746 | 59 | 8 | 1 | 4 | 62 | 8 | 65 | 2.70e-27 | 104 |
| Msa0464700 | MtrunA17_Chr3g0098721 | 26.218 | 431 | 246 | 14 | 189 | 613 | 54 | 418 | 2.16e-26 | 112 |
| Msa0464700 | MtrunA17_Chr6g0453731 | 27.053 | 414 | 186 | 15 | 246 | 589 | 146 | 513 | 1.27e-25 | 111 |
| Msa0464700 | MtrunA17_Chr5g0443881 | 24.390 | 451 | 263 | 18 | 173 | 613 | 42 | 424 | 1.23e-22 | 101 |
| Msa0464700 | MtrunA17_Chr7g0236041 | 25.352 | 426 | 202 | 13 | 246 | 600 | 146 | 526 | 2.09e-22 | 101 |
| Msa0464700 | MtrunA17_Chr3g0121411 | 24.186 | 430 | 202 | 14 | 246 | 600 | 147 | 527 | 6.04e-22 | 100 |
| Msa0464700 | MtrunA17_Chr3g0121431 | 23.944 | 426 | 208 | 14 | 246 | 600 | 202 | 582 | 6.81e-21 | 97.1 |
| Msa0464700 | MtrunA17_Chr1g0211041 | 24.122 | 427 | 242 | 19 | 190 | 590 | 70 | 440 | 2.87e-18 | 88.2 |
| Msa0464700 | MtrunA17_Chr4g0019091 | 24.793 | 363 | 218 | 15 | 246 | 590 | 113 | 438 | 4.47e-18 | 87.4 |
| Msa0464700 | MtrunA17_Chr4g0019071 | 25.321 | 312 | 186 | 12 | 301 | 595 | 39 | 320 | 1.12e-17 | 84.7 |
| Msa0464700 | MtrunA17_Chr6g0449981 | 93.103 | 29 | 2 | 0 | 232 | 260 | 1 | 29 | 2.18e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464700 | AT5G50400.1 | 73.322 | 611 | 157 | 3 | 9 | 619 | 6 | 610 | 0.0 | 947 |
| Msa0464700 | AT4G24890.1 | 72.287 | 599 | 163 | 2 | 21 | 619 | 19 | 614 | 0.0 | 924 |
| Msa0464700 | AT1G13750.1 | 66.504 | 615 | 203 | 1 | 5 | 619 | 1 | 612 | 0.0 | 876 |
| Msa0464700 | AT5G50400.2 | 78.824 | 510 | 107 | 1 | 110 | 619 | 30 | 538 | 0.0 | 863 |
| Msa0464700 | AT1G13900.1 | 29.734 | 602 | 322 | 26 | 50 | 598 | 24 | 577 | 8.99e-59 | 209 |
| Msa0464700 | AT2G03450.1 | 28.805 | 611 | 332 | 25 | 43 | 598 | 15 | 577 | 1.42e-57 | 205 |
| Msa0464700 | AT3G52780.1 | 26.218 | 431 | 244 | 15 | 172 | 589 | 36 | 405 | 1.88e-28 | 119 |
| Msa0464700 | AT3G52810.1 | 26.450 | 431 | 243 | 17 | 169 | 589 | 42 | 408 | 1.25e-27 | 116 |
| Msa0464700 | AT3G52820.1 | 26.728 | 434 | 248 | 18 | 162 | 589 | 35 | 404 | 4.14e-24 | 105 |
| Msa0464700 | AT3G20500.1 | 30.466 | 279 | 163 | 10 | 320 | 589 | 147 | 403 | 6.45e-24 | 105 |
| Msa0464700 | AT4G13700.1 | 26.970 | 330 | 171 | 11 | 246 | 547 | 140 | 427 | 6.99e-24 | 105 |
| Msa0464700 | AT2G27190.1 | 27.671 | 365 | 205 | 15 | 246 | 590 | 118 | 443 | 9.30e-23 | 102 |
| Msa0464700 | AT3G52780.2 | 27.507 | 349 | 198 | 12 | 172 | 513 | 36 | 336 | 1.66e-22 | 100 |
| Msa0464700 | AT5G34850.1 | 25.203 | 369 | 234 | 12 | 246 | 602 | 112 | 450 | 1.97e-22 | 101 |
| Msa0464700 | AT4G36350.1 | 24.044 | 366 | 218 | 13 | 246 | 591 | 114 | 439 | 1.45e-19 | 92.4 |
| Msa0464700 | AT3G07130.1 | 24.466 | 421 | 209 | 15 | 246 | 600 | 140 | 517 | 2.55e-19 | 92.0 |
| Msa0464700 | AT4G13700.2 | 26.804 | 291 | 153 | 10 | 246 | 508 | 140 | 398 | 5.71e-19 | 90.1 |
| Msa0464700 | AT1G56360.1 | 22.782 | 417 | 264 | 16 | 191 | 591 | 65 | 439 | 1.12e-18 | 89.7 |
| Msa0464700 | AT2G18130.1 | 25.714 | 280 | 179 | 10 | 338 | 602 | 168 | 433 | 4.59e-15 | 78.2 |
| Msa0464700 | AT2G32770.3 | 22.170 | 424 | 201 | 16 | 246 | 589 | 149 | 523 | 7.65e-15 | 78.2 |
| Msa0464700 | AT3G07130.2 | 22.676 | 441 | 225 | 16 | 246 | 600 | 140 | 550 | 1.03e-14 | 77.8 |
| Msa0464700 | AT2G32770.2 | 23.343 | 347 | 172 | 14 | 246 | 547 | 68 | 365 | 8.39e-13 | 71.2 |
Find 174 sgRNAs with CRISPR-Local
Find 522 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGTTTCATTTACCTTTAT+TGG | 0.162930 | 3_3:-64848248 | None:intergenic |
| TTTAATGCACACCTCATATT+TGG | 0.186772 | 3_3:-64849410 | None:intergenic |
| TAGTAGTTATACCTGATAAA+TGG | 0.220072 | 3_3:-64851067 | None:intergenic |
| GAGTTTCATTTACCTTTATT+GGG | 0.220701 | 3_3:-64848247 | None:intergenic |
| CAGTCTTCATTAGTTGGTTC+TGG | 0.230728 | 3_3:-64846805 | None:intergenic |
| TACCTTACTGCCAAGCAAAA+AGG | 0.234836 | 3_3:-64844737 | None:intergenic |
| TAATATAACTCACCAGAATT+TGG | 0.238636 | 3_3:-64850210 | None:intergenic |
| TGAATCTGCTTTCCACCCTT+TGG | 0.258361 | 3_3:-64849175 | None:intergenic |
| TGCAGGTATGCCACAGATTA+TGG | 0.265751 | 3_3:+64850763 | Msa0464700:intron |
| TACTTCACCCTCTACTTAAA+AGG | 0.265821 | 3_3:-64844497 | None:intergenic |
| GAATCTGCTTTCCACCCTTT+GGG | 0.297542 | 3_3:-64849174 | None:intergenic |
| GCGAACCTTGCTATCATATA+TGG | 0.299475 | 3_3:-64849980 | None:intergenic |
| GGGAAAGTTTGCAGGGGCTT+TGG | 0.317516 | 3_3:+64850983 | Msa0464700:CDS |
| ATTATATTTCTACAAGTGTT+TGG | 0.318459 | 3_3:-64851819 | None:intergenic |
| AGAGACAAAGACTATGGTTT+TGG | 0.320936 | 3_3:+64851331 | Msa0464700:CDS |
| CATGGGAAGGGAAAGTTTGC+AGG | 0.323081 | 3_3:+64850975 | Msa0464700:CDS |
| TTCTATGACACTCCAGATTC+AGG | 0.324023 | 3_3:+64850131 | Msa0464700:CDS |
| CGCGGATACACAGGTGCTTT+AGG | 0.325055 | 3_3:-64848901 | None:intergenic |
| CTGCACGTTGATTGATCAAT+TGG | 0.331585 | 3_3:-64848424 | None:intergenic |
| CCGCATTCTCCACCTGAATC+TGG | 0.338489 | 3_3:-64850143 | None:intergenic |
| TTGGGTGATATGAATGGATT+TGG | 0.345669 | 3_3:+64844637 | Msa0464700:CDS |
| AAGAGTATGCCCCATTTATC+AGG | 0.358857 | 3_3:+64851056 | Msa0464700:CDS |
| TTGCAACGTGTTATCATATT+CGG | 0.359394 | 3_3:+64849610 | Msa0464700:CDS |
| CCCAGGTACGCCTATAGGTT+GGG | 0.360573 | 3_3:+64849508 | Msa0464700:intron |
| CACCAACTTGAGGATCTGTT+TGG | 0.360863 | 3_3:+64844618 | Msa0464700:CDS |
| AGTAGTTATACCTGATAAAT+GGG | 0.363474 | 3_3:-64851066 | None:intergenic |
| AGTCTTCATTAGTTGGTTCT+GGG | 0.366107 | 3_3:-64846804 | None:intergenic |
| CGTCCAATGCCACCGGGGTT+GGG | 0.366293 | 3_3:-64848197 | None:intergenic |
| GGCATACTCTTTCGTAGTTA+TGG | 0.374674 | 3_3:-64851044 | None:intergenic |
| ACGATTAAATGTCAATGTTC+CGG | 0.375358 | 3_3:-64849206 | None:intergenic |
| CTGCAAACTTTCCCTTCCCA+TGG | 0.377219 | 3_3:-64850974 | None:intergenic |
| CATTATTCTGGCACTGTGAA+TGG | 0.377604 | 3_3:+64851229 | Msa0464700:CDS |
| TCACCACAGCACCTCCTGTT+TGG | 0.380045 | 3_3:+64851299 | Msa0464700:CDS |
| AGCTGTACCATTTGTTGAAT+GGG | 0.384608 | 3_3:+64849150 | Msa0464700:CDS |
| ACCGTTGGCTGGCGTGATCC+TGG | 0.389377 | 3_3:+64849353 | Msa0464700:CDS |
| GTATGTTACTTGAAGTTTGC+AGG | 0.390132 | 3_3:-64846844 | None:intergenic |
| CAGGTTTCCTTGAAGAACTT+TGG | 0.392296 | 3_3:+64849387 | Msa0464700:CDS |
| CCGTCCAATGCCACCGGGGT+TGG | 0.396303 | 3_3:-64848198 | None:intergenic |
| AGGTAAGTTAAACATGAGTT+TGG | 0.397660 | 3_3:+64844576 | Msa0464700:CDS |
| CTGAGAACAAAGCCAAATTC+TGG | 0.397715 | 3_3:+64850198 | Msa0464700:CDS |
| AGAATGGGTGACAGTAAAAC+TGG | 0.399637 | 3_3:+64846777 | Msa0464700:CDS |
| CATGTTGTTGTTGGTGGAGG+GGG | 0.399824 | 3_3:+64851259 | Msa0464700:CDS |
| TGTCTGATGGCTCTTATGTA+TGG | 0.401100 | 3_3:+64849539 | Msa0464700:CDS |
| CATATGCTCAGCCCCAATAA+AGG | 0.402084 | 3_3:+64848235 | Msa0464700:CDS |
| TCATAGAAGGATCCTGAGTT+TGG | 0.403373 | 3_3:-64850116 | None:intergenic |
| CAATAAATGCCCCAACCTAT+AGG | 0.409594 | 3_3:-64849518 | None:intergenic |
| TCTTCCCCAGGTACGCCTAT+AGG | 0.412213 | 3_3:+64849503 | Msa0464700:intron |
| TTATATTTCTACAAGTGTTT+GGG | 0.414076 | 3_3:-64851818 | None:intergenic |
| TCTACTTAAAAGGCTCTTGA+TGG | 0.417134 | 3_3:-64844487 | None:intergenic |
| CCAACCCAGTCTTCATTAGT+TGG | 0.419485 | 3_3:-64846811 | None:intergenic |
| ATCTCTATAGTCCCTGGAAA+TGG | 0.436173 | 3_3:-64851434 | None:intergenic |
| TTCAAGGCATCTCCTTATCC+TGG | 0.438321 | 3_3:+64849577 | Msa0464700:CDS |
| AAGAACTTTGGCCAAATATG+AGG | 0.438770 | 3_3:+64849399 | Msa0464700:CDS |
| AATTTGGCTTTGTTCTCAGC+AGG | 0.439009 | 3_3:-64850194 | None:intergenic |
| CTTGGCATACCAATCATTAG+AGG | 0.440011 | 3_3:-64850932 | None:intergenic |
| CCACCCAACCCCGGTGGCAT+TGG | 0.440027 | 3_3:+64848194 | Msa0464700:CDS |
| TGAATCTGGAGTGTCATAGA+AGG | 0.450964 | 3_3:-64850129 | None:intergenic |
| CTCTTCAAATGAACCCTCCT+TGG | 0.453099 | 3_3:-64850950 | None:intergenic |
| TTTGGGCCCCATTCAACAAA+TGG | 0.461006 | 3_3:-64849157 | None:intergenic |
| ACCAACTTGAGGATCTGTTT+GGG | 0.461280 | 3_3:+64844619 | Msa0464700:CDS |
| TATTTGGCCAAAGTTCTTCA+AGG | 0.461537 | 3_3:-64849394 | None:intergenic |
| GGAACAATTCATGTTGTTGT+TGG | 0.462326 | 3_3:+64851250 | Msa0464700:CDS |
| GTGGAAATCACGAACGCTCT+TGG | 0.464456 | 3_3:+64850093 | Msa0464700:intron |
| CTCAGCAGGGTAATAGTACA+TGG | 0.467918 | 3_3:-64850180 | None:intergenic |
| ATCTGTTTGGGTGATATGAA+TGG | 0.471658 | 3_3:+64844631 | Msa0464700:CDS |
| ATTCATGTTGTTGTTGGTGG+AGG | 0.474320 | 3_3:+64851256 | Msa0464700:CDS |
| TTGGGGCATTTATTGTCTGA+TGG | 0.475270 | 3_3:+64849526 | Msa0464700:CDS |
| AACCTGCGCGAACCGTTGGC+TGG | 0.475752 | 3_3:+64849342 | Msa0464700:CDS |
| CCCCAGGTACGCCTATAGGT+TGG | 0.480019 | 3_3:+64849507 | Msa0464700:intron |
| TCTCTGAAAATACTCCAAAC+AGG | 0.481381 | 3_3:-64851313 | None:intergenic |
| CAGGGACTATAGAGATGTCT+TGG | 0.482107 | 3_3:+64851441 | Msa0464700:CDS |
| GTATTTAGGATTGGAGTGGT+TGG | 0.482977 | 3_3:-64848372 | None:intergenic |
| GTGTATCCGCGCCTTGCTCA+TGG | 0.485506 | 3_3:+64848913 | Msa0464700:CDS |
| AAGCTGTACCATTTGTTGAA+TGG | 0.486572 | 3_3:+64849149 | Msa0464700:CDS |
| TTCATGTTGTTGTTGGTGGA+GGG | 0.486891 | 3_3:+64851257 | Msa0464700:CDS |
| TTTGAAACTGCAACAAGCTT+AGG | 0.488913 | 3_3:-64848859 | None:intergenic |
| TCGGTTACTCCTCTAATGAT+TGG | 0.490311 | 3_3:+64850923 | Msa0464700:CDS |
| TGTCTAAATCCTTGATGAGC+TGG | 0.492936 | 3_3:-64849853 | None:intergenic |
| ATCTACCCGTCCAATGCCAC+CGG | 0.493173 | 3_3:-64848204 | None:intergenic |
| GCTCTTATGTATGGAGTAAG+AGG | 0.494084 | 3_3:+64849548 | Msa0464700:CDS |
| ACAATTCATGTTGTTGTTGG+TGG | 0.495571 | 3_3:+64851253 | Msa0464700:CDS |
| CAGAACCAACTAATGAAGAC+TGG | 0.498767 | 3_3:+64846806 | Msa0464700:CDS |
| TGCAAACTTTCCCTTCCCAT+GGG | 0.500947 | 3_3:-64850973 | None:intergenic |
| ATTGGGGCTGAGCATATGAA+TGG | 0.502132 | 3_3:-64848230 | None:intergenic |
| AGAATCATGGATCGCAAGAA+TGG | 0.504874 | 3_3:-64844695 | None:intergenic |
| GGAGATCTGCCATATGCAAA+TGG | 0.505321 | 3_3:+64849899 | Msa0464700:CDS |
| TTTGTTGAATGGGGCCCAAA+GGG | 0.507205 | 3_3:+64849160 | Msa0464700:CDS |
| AGTTTCATTTACCTTTATTG+GGG | 0.515764 | 3_3:-64848246 | None:intergenic |
| CCAACCCCGGTGGCATTGGA+CGG | 0.516793 | 3_3:+64848198 | Msa0464700:CDS |
| CAGTAATGGAGGCAGAATCA+TGG | 0.518657 | 3_3:-64844708 | None:intergenic |
| GAGTAAGAGGTATTCATTCA+AGG | 0.520098 | 3_3:+64849561 | Msa0464700:CDS |
| GGTCAACCTGCGCGAACCGT+TGG | 0.521129 | 3_3:+64849338 | Msa0464700:intron |
| CAACCCCGGTGGCATTGGAC+GGG | 0.532592 | 3_3:+64848199 | Msa0464700:CDS |
| CGCCAGCCAACGGTTCGCGC+AGG | 0.534632 | 3_3:-64849344 | None:intergenic |
| TGAGCAAGGCGCGGATACAC+AGG | 0.538957 | 3_3:-64848910 | None:intergenic |
| GAACGCTCTTGGCCAAACTC+AGG | 0.539098 | 3_3:+64850104 | Msa0464700:CDS |
| TAATAGTACATGGTTTCTGC+AGG | 0.541874 | 3_3:-64850170 | None:intergenic |
| CAAGAAAAGTAGTGATGGAA+AGG | 0.542299 | 3_3:+64851396 | Msa0464700:CDS |
| GTCCTTTAGGCTGAGCGTGA+TGG | 0.547365 | 3_3:+64849782 | Msa0464700:intron |
| GTCTTCATTAGTTGGTTCTG+GGG | 0.549003 | 3_3:-64846803 | None:intergenic |
| TCCAAGACTTTCCATGAGCA+AGG | 0.549311 | 3_3:-64848924 | None:intergenic |
| TCATGTTGTTGTTGGTGGAG+GGG | 0.552640 | 3_3:+64851258 | Msa0464700:CDS |
| TATGACAGATGACAGTTACC+TGG | 0.552868 | 3_3:+64849104 | Msa0464700:intron |
| TGTTATCATATTCGGTGACA+TGG | 0.552892 | 3_3:+64849618 | Msa0464700:CDS |
| CCAATGCCACCGGGGTTGGG+TGG | 0.553233 | 3_3:-64848194 | None:intergenic |
| GGGTTCATTTGAAGAGCCCA+TGG | 0.554005 | 3_3:+64850957 | Msa0464700:CDS |
| CTCTAATGATTGGTATGCCA+AGG | 0.554950 | 3_3:+64850933 | Msa0464700:CDS |
| TCTACCCGTCCAATGCCACC+GGG | 0.555257 | 3_3:-64848203 | None:intergenic |
| CCAGGTACGCCTATAGGTTG+GGG | 0.555647 | 3_3:+64849509 | Msa0464700:intron |
| ATTTGTTGAATGGGGCCCAA+AGG | 0.559998 | 3_3:+64849159 | Msa0464700:CDS |
| TAGCAGACACTGAACATGAC+TGG | 0.560714 | 3_3:+64850803 | Msa0464700:CDS |
| GCAGGGCGAGGATACAGAAT+GGG | 0.561327 | 3_3:+64846762 | Msa0464700:intron |
| TATGTCATATCCACTTGTCC+AGG | 0.562397 | 3_3:-64849122 | None:intergenic |
| GCCTCTTCATCACCAACTTG+AGG | 0.562952 | 3_3:+64844608 | Msa0464700:CDS |
| TCCTCAAGTTGGTGATGAAG+AGG | 0.564410 | 3_3:-64844609 | None:intergenic |
| ATTTGAAGAGCCCATGGGAA+GGG | 0.565074 | 3_3:+64850963 | Msa0464700:CDS |
| GAGATGTATCCATTTGCATA+TGG | 0.566529 | 3_3:-64849908 | None:intergenic |
| CAAGACATCTCTATAGTCCC+TGG | 0.567071 | 3_3:-64851440 | None:intergenic |
| ACTTAAAAGGCTCTTGATGG+AGG | 0.570667 | 3_3:-64844484 | None:intergenic |
| GAATATGCTAATTATCAACC+TGG | 0.571971 | 3_3:+64849812 | Msa0464700:CDS |
| ACTGAACATGACTGGAGAGA+AGG | 0.580541 | 3_3:+64850811 | Msa0464700:CDS |
| CACCACTGACCAGCTCATCA+AGG | 0.584625 | 3_3:+64849844 | Msa0464700:CDS |
| GAGTACAAGAAAAGTAGTGA+TGG | 0.585752 | 3_3:+64851391 | Msa0464700:CDS |
| TGCAGGGCGAGGATACAGAA+TGG | 0.587032 | 3_3:+64846761 | Msa0464700:intron |
| CTTAAAAGGCTCTTGATGGA+GGG | 0.587065 | 3_3:-64844483 | None:intergenic |
| CATATTCGGTGACATGGGAA+AGG | 0.587852 | 3_3:+64849624 | Msa0464700:CDS |
| ATGACAGTTACCTGGACAAG+TGG | 0.589057 | 3_3:+64849112 | Msa0464700:CDS |
| ACCCAAACAGATCCTCAAGT+TGG | 0.593043 | 3_3:-64844620 | None:intergenic |
| CAGTTCCATATATGATAGCA+AGG | 0.595584 | 3_3:+64849975 | Msa0464700:CDS |
| ATGGGAAGGGAAAGTTTGCA+GGG | 0.596275 | 3_3:+64850976 | Msa0464700:CDS |
| CCAACTAATGAAGACTGGGT+TGG | 0.597652 | 3_3:+64846811 | Msa0464700:CDS |
| AAGCAGATTCAATCTGCTGC+CGG | 0.597918 | 3_3:+64849187 | Msa0464700:CDS |
| ACCAGGATCACGCCAGCCAA+CGG | 0.599833 | 3_3:-64849354 | None:intergenic |
| TCCACCTGAAAATAGTGCAA+AGG | 0.604263 | 3_3:-64848453 | None:intergenic |
| GTTGAATGGGGCCCAAAGGG+TGG | 0.605971 | 3_3:+64849163 | Msa0464700:CDS |
| TTTGCAGCACATCGCCCACT+CGG | 0.606514 | 3_3:+64850904 | Msa0464700:CDS |
| TGAATGGCAATCTTTGAAAG+TGG | 0.607314 | 3_3:-64844667 | None:intergenic |
| CATTTGAAGAGCCCATGGGA+AGG | 0.608262 | 3_3:+64850962 | Msa0464700:CDS |
| CATATGGCAGATCTCCTATG+TGG | 0.608314 | 3_3:-64849892 | None:intergenic |
| GCCTTGCTCATGGAAAGTCT+TGG | 0.610045 | 3_3:+64848923 | Msa0464700:CDS |
| AAACCTGTGTGTATAAAACC+AGG | 0.612380 | 3_3:-64849371 | None:intergenic |
| GTTATCATATTCGGTGACAT+GGG | 0.619175 | 3_3:+64849619 | Msa0464700:CDS |
| ACATGACTGGAGAGAAGGAT+CGG | 0.620114 | 3_3:+64850816 | Msa0464700:CDS |
| CCAGATTCAGGTGGAGAATG+CGG | 0.625344 | 3_3:+64850143 | Msa0464700:CDS |
| AATGATTGGTATGCCAAGGA+GGG | 0.625443 | 3_3:+64850937 | Msa0464700:CDS |
| ATTTGGCTTTGTTCTCAGCA+GGG | 0.626371 | 3_3:-64850193 | None:intergenic |
| CTCACAACCATCGTGCACAC+AGG | 0.626678 | 3_3:-64851464 | None:intergenic |
| ACTCCAAACAGGAGGTGCTG+TGG | 0.627083 | 3_3:-64851302 | None:intergenic |
| TAATGATTGGTATGCCAAGG+AGG | 0.627561 | 3_3:+64850936 | Msa0464700:CDS |
| AGAACCAACTAATGAAGACT+GGG | 0.631293 | 3_3:+64846807 | Msa0464700:CDS |
| ATCCTTGATGAGCTGGTCAG+TGG | 0.633150 | 3_3:-64849846 | None:intergenic |
| GGTTCATTTGAAGAGCCCAT+GGG | 0.633987 | 3_3:+64850958 | Msa0464700:CDS |
| GACTTTCCATGAGCAAGGCG+CGG | 0.635264 | 3_3:-64848919 | None:intergenic |
| TCAGTGGTGTTAAGTGAACC+AGG | 0.637131 | 3_3:-64849830 | None:intergenic |
| TTTAATCGTAACAGCATGTG+TGG | 0.639129 | 3_3:+64849220 | Msa0464700:CDS |
| TCAACATGTCCACCCAACCC+CGG | 0.639236 | 3_3:+64848185 | Msa0464700:CDS |
| TATGACACTCCAGATTCAGG+TGG | 0.641435 | 3_3:+64850134 | Msa0464700:CDS |
| CATAATTCAGAGTGCCAAGG+TGG | 0.647479 | 3_3:-64851491 | None:intergenic |
| GCTGTACCATTTGTTGAATG+GGG | 0.649227 | 3_3:+64849151 | Msa0464700:CDS |
| ACGAAACATGCCATAATCTG+TGG | 0.650821 | 3_3:-64850773 | None:intergenic |
| TAGATAGAAAACAACAACCA+TGG | 0.654457 | 3_3:+64850875 | Msa0464700:CDS |
| AAATGGATACATCTCACAGT+GGG | 0.656289 | 3_3:+64849916 | Msa0464700:CDS |
| CTACATAATTCAGAGTGCCA+AGG | 0.658085 | 3_3:-64851494 | None:intergenic |
| GTCTTGGCCTGTGTGCACGA+TGG | 0.663436 | 3_3:+64851457 | Msa0464700:CDS |
| GTAGTTATACCTGATAAATG+GGG | 0.675933 | 3_3:-64851065 | None:intergenic |
| CATTAGAGGAGTAACCGAGT+GGG | 0.692825 | 3_3:-64850918 | None:intergenic |
| CTGAAAATACTCCAAACAGG+AGG | 0.700173 | 3_3:-64851310 | None:intergenic |
| TGGGAAGGGAAAGTTTGCAG+GGG | 0.702638 | 3_3:+64850977 | Msa0464700:CDS |
| TCATTAGAGGAGTAACCGAG+TGG | 0.714971 | 3_3:-64850919 | None:intergenic |
| TGGTTGTGAGAAAACCACCT+TGG | 0.719747 | 3_3:+64851477 | Msa0464700:CDS |
| ACATGTCCACCCAACCCCGG+TGG | 0.724016 | 3_3:+64848188 | Msa0464700:CDS |
| CTACCCGTCCAATGCCACCG+GGG | 0.725369 | 3_3:-64848202 | None:intergenic |
| CAAATGGATACATCTCACAG+TGG | 0.732996 | 3_3:+64849915 | Msa0464700:CDS |
| TGTGCTGCAAAGATTAACCA+TGG | 0.735965 | 3_3:-64850892 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAAAATTAAATT+TGG | - | chr3_3:64847881-64847900 | None:intergenic | 0.0% |
| !!! | AATTTAATTTTTTTTTTTTA+AGG | + | chr3_3:64847881-64847900 | Msa0464700:intron | 0.0% |
| !!! | ATAATTTTTCATTTAAACAA+TGG | + | chr3_3:64844552-64844571 | Msa0464700:exon | 10.0% |
| !! | AAATCTATATCAATATATAA+AGG | - | chr3_3:64845071-64845090 | None:intergenic | 10.0% |
| !!! | TCTTGTTTTTAATATTTTAT+AGG | + | chr3_3:64845656-64845675 | Msa0464700:intron | 10.0% |
| !! | AATAAATTCAAAAAAATGTT+AGG | + | chr3_3:64845800-64845819 | Msa0464700:intron | 10.0% |
| !! | ATAAATTCAAAAAAATGTTA+GGG | + | chr3_3:64845801-64845820 | Msa0464700:intron | 10.0% |
| !!! | GTTTTTTTGAATTTATTTAA+CGG | + | chr3_3:64846596-64846615 | Msa0464700:intron | 10.0% |
| !!! | AAATTTTGAACTTATTTTTT+GGG | + | chr3_3:64847486-64847505 | Msa0464700:intron | 10.0% |
| !! | ATATAACAAAATATTTGAAA+GGG | + | chr3_3:64847712-64847731 | Msa0464700:intron | 10.0% |
| !!! | TAATTTTTTTTTTTTAAGGA+AGG | + | chr3_3:64847885-64847904 | Msa0464700:intron | 10.0% |
| !!! | ATTTTTAGAAAAAGATAATA+AGG | - | chr3_3:64849278-64849297 | None:intergenic | 10.0% |
| !! | TTATTTAATGTTTATAACAT+TGG | + | chr3_3:64849656-64849675 | Msa0464700:intron | 10.0% |
| !! | AATAGGTTAAATTAATGAAA+CGG | - | chr3_3:64844775-64844794 | None:intergenic | 15.0% |
| !! | AATTAAGTGAAATGTTAAAT+TGG | + | chr3_3:64844875-64844894 | Msa0464700:intron | 15.0% |
| !!! | AATGAATTACTTAACTATTT+TGG | - | chr3_3:64844917-64844936 | None:intergenic | 15.0% |
| !!! | TAATGAAATTTAGTTTTTTG+AGG | + | chr3_3:64845143-64845162 | Msa0464700:intron | 15.0% |
| !!! | AATGAAATTTAGTTTTTTGA+GGG | + | chr3_3:64845144-64845163 | Msa0464700:intron | 15.0% |
| !!! | TCATAAATCTTTTATATGTT+CGG | + | chr3_3:64845582-64845601 | Msa0464700:intron | 15.0% |
| !! | GATATCAAATAAATAGTTAA+GGG | - | chr3_3:64845700-64845719 | None:intergenic | 15.0% |
| !!! | ACAATCTTTTTTTTAGTTAA+GGG | - | chr3_3:64846662-64846681 | None:intergenic | 15.0% |
| !!! | AACAATCTTTTTTTTAGTTA+AGG | - | chr3_3:64846661-64846680 | None:intergenic | 15.0% |
| !!! | AACTAAAAAAAAGATTGTTT+TGG | + | chr3_3:64845733-64845752 | Msa0464700:intron | 15.0% |
| !! | TTTGAATTTATTTAATGGAA+GGG | - | chr3_3:64845792-64845811 | None:intergenic | 15.0% |
| !!! | TTTTGAATTTATTTAATGGA+AGG | - | chr3_3:64845793-64845812 | None:intergenic | 15.0% |
| !! | GATACCAAATAAATATTTAA+GGG | + | chr3_3:64845917-64845936 | Msa0464700:intron | 15.0% |
| !!! | GCTATTTTTTAGTTTTTTTT+TGG | + | chr3_3:64846351-64846370 | Msa0464700:intron | 15.0% |
| !! | GATACCAAATAAATAATTAA+GGG | - | chr3_3:64846467-64846486 | None:intergenic | 15.0% |
| !! | ATAAATTCAAAAAAACGTTA+GGG | - | chr3_3:64846592-64846611 | None:intergenic | 15.0% |
| !! | AATAAATTCAAAAAAACGTT+AGG | - | chr3_3:64846593-64846612 | None:intergenic | 15.0% |
| !!! | AACAATCTTTTTTTTAGTTA+AGG | + | chr3_3:64846661-64846680 | Msa0464700:intron | 15.0% |
| !!! | ACAATCTTTTTTTTAGTTAA+GGG | + | chr3_3:64846662-64846681 | Msa0464700:intron | 15.0% |
| !! | CAAAAAATAAGTTCAAAATT+TGG | - | chr3_3:64847487-64847506 | None:intergenic | 15.0% |
| !!! | CAAATTTTGAACTTATTTTT+TGG | + | chr3_3:64847485-64847504 | Msa0464700:intron | 15.0% |
| !! | GATATAACAAAATATTTGAA+AGG | + | chr3_3:64847711-64847730 | Msa0464700:intron | 15.0% |
| !! | TATAACAAAATATTTGAAAG+GGG | + | chr3_3:64847713-64847732 | Msa0464700:intron | 15.0% |
| !! | AATTTAAAAAACTGTATTGA+AGG | + | chr3_3:64847817-64847836 | Msa0464700:intron | 15.0% |
| !!! | TATTTCTATAATTTCATTGT+TGG | + | chr3_3:64850351-64850370 | Msa0464700:intron | 15.0% |
| !! | TTACAAATATTCTTTATAAG+AGG | - | chr3_3:64851596-64851615 | None:intergenic | 15.0% |
| !! | TCTTATAAAGAATATTTGTA+AGG | + | chr3_3:64851595-64851614 | Msa0464700:intron | 15.0% |
| !! | TTCCTATATATAGAGAAAAA+CGG | - | chr3_3:64844461-64844480 | None:intergenic | 20.0% |
| !!! | TTTTTCATTTAAACAATGGA+AGG | + | chr3_3:64844556-64844575 | Msa0464700:exon | 20.0% |
| !! | ATAGGTTAAATTAATGAAAC+GGG | - | chr3_3:64844774-64844793 | None:intergenic | 20.0% |
| !! | AGTAAGTTTGTATCAAAAAA+TGG | - | chr3_3:64844997-64845016 | None:intergenic | 20.0% |
| !! | CTATATCAATATATAAAGGA+AGG | - | chr3_3:64845067-64845086 | None:intergenic | 20.0% |
| !!! | ATGAAATTTAGTTTTTTGAG+GGG | + | chr3_3:64845145-64845164 | Msa0464700:intron | 20.0% |
| !! | CGATATCAAATAAATAGTTA+AGG | - | chr3_3:64845701-64845720 | None:intergenic | 20.0% |
| !!! | ATATTTATTTGGTATCGTTT+TGG | - | chr3_3:64845913-64845932 | None:intergenic | 20.0% |
| !! | CGATACCAAATAAATATTTA+AGG | + | chr3_3:64845916-64845935 | Msa0464700:intron | 20.0% |
| !! | TGATCCCTTAAATATTTATT+TGG | - | chr3_3:64845924-64845943 | None:intergenic | 20.0% |
| !!! | TGTGTTTTTTTTTTCTTTTC+TGG | - | chr3_3:64846008-64846027 | None:intergenic | 20.0% |
| !!! | TTTTCTGTGTTTTTTTTTTC+TGG | + | chr3_3:64846378-64846397 | Msa0464700:intron | 20.0% |
| !!! | GAAAAACTTAAATGTTCTTT+TGG | + | chr3_3:64846440-64846459 | Msa0464700:intron | 20.0% |
| !! | CGATACCAAATAAATAATTA+AGG | - | chr3_3:64846468-64846487 | None:intergenic | 20.0% |
| !!! | TTATTTATTTGGTATCGTTT+TGG | + | chr3_3:64846471-64846490 | Msa0464700:intron | 20.0% |
| !! | TTTGAATTTATTTAACGGAA+AGG | + | chr3_3:64846601-64846620 | Msa0464700:intron | 20.0% |
| !! | GATACCAAATAAATAGTTAA+GGG | + | chr3_3:64846693-64846712 | Msa0464700:intron | 20.0% |
| !! | TATGAGTACAACTATAAAAT+AGG | - | chr3_3:64846737-64846756 | None:intergenic | 20.0% |
| !!! | GAATTTTGTATGAATCATAT+TGG | + | chr3_3:64846963-64846982 | Msa0464700:intron | 20.0% |
| !! | AAAAAAAATGAAGAATGAAG+TGG | + | chr3_3:64847689-64847708 | Msa0464700:intron | 20.0% |
| !! | TAATAGCACTAGTATATAAA+GGG | - | chr3_3:64848778-64848797 | None:intergenic | 20.0% |
| !! | ATGTATAATTAGGAAATGTT+AGG | - | chr3_3:64848992-64849011 | None:intergenic | 20.0% |
| !! | AACATTTCCTAATTATACAT+TGG | + | chr3_3:64848992-64849011 | Msa0464700:intron | 20.0% |
| !! | ATAAGAACCAATGTATAATT+AGG | - | chr3_3:64849002-64849021 | None:intergenic | 20.0% |
| !!! | AGAGTTTTTAGATAAAAAGT+TGG | - | chr3_3:64849711-64849730 | None:intergenic | 20.0% |
| !! | AAACTCAATTCAAATTTCTA+TGG | - | chr3_3:64850026-64850045 | None:intergenic | 20.0% |
| !! | AAAGAAAAATCTCATTATTC+TGG | + | chr3_3:64851217-64851236 | Msa0464700:CDS | 20.0% |
| !! | AATAACAGTTATTATGTGTT+AGG | + | chr3_3:64851570-64851589 | Msa0464700:intron | 20.0% |
| ! | TCCTATATATAGAGAAAAAC+GGG | - | chr3_3:64844460-64844479 | None:intergenic | 25.0% |
| !!! | GAAAACTTTTGTTTTCACAA+AGG | + | chr3_3:64844522-64844541 | Msa0464700:five_prime_UTR | 25.0% |
| ! | TAGGTTAAATTAATGAAACG+GGG | - | chr3_3:64844773-64844792 | None:intergenic | 25.0% |
| ! | CTAGTGAGAACAAAATAAAT+AGG | - | chr3_3:64844792-64844811 | None:intergenic | 25.0% |
| ! | TCATTCATTGCTAATAAAAG+TGG | - | chr3_3:64844839-64844858 | None:intergenic | 25.0% |
| !!! | TTTCTGTTTTGTTTTGTTGA+GGG | - | chr3_3:64845202-64845221 | None:intergenic | 25.0% |
| !!! | TTTTCTGTTTTGTTTTGTTG+AGG | - | chr3_3:64845203-64845222 | None:intergenic | 25.0% |
| ! | AAATAGTTTAATAGCCTGTT+TGG | + | chr3_3:64845398-64845417 | Msa0464700:intron | 25.0% |
| ! | TTTAAGCTTCCTAAAAATCA+CGG | - | chr3_3:64845467-64845486 | None:intergenic | 25.0% |
| ! | CTATTTATTTGATATCGCTT+TGG | + | chr3_3:64845704-64845723 | Msa0464700:intron | 25.0% |
| ! | AACAAAGGATTACTTAAAGA+AGG | + | chr3_3:64846272-64846291 | Msa0464700:intron | 25.0% |
| ! | TGGTCCCTTAATTATTTATT+TGG | + | chr3_3:64846460-64846479 | Msa0464700:intron | 25.0% |
| ! | CGATACCAAATAAATAGTTA+AGG | + | chr3_3:64846692-64846711 | Msa0464700:intron | 25.0% |
| !! | TGAAAAAGTACATTGACAAT+AGG | + | chr3_3:64847013-64847032 | Msa0464700:intron | 25.0% |
| ! | AATGTGATTTAAGTCATGTT+GGG | + | chr3_3:64847330-64847349 | Msa0464700:intron | 25.0% |
| !!! | AGTATTTTAGGAAGTTTGAT+TGG | + | chr3_3:64847385-64847404 | Msa0464700:intron | 25.0% |
| !!! | GTATTTTAGGAAGTTTGATT+GGG | + | chr3_3:64847386-64847405 | Msa0464700:intron | 25.0% |
| ! | CATTGGATAAATTGGATTTA+AGG | - | chr3_3:64847589-64847608 | None:intergenic | 25.0% |
| !!! | TAGGAGTTTATTTTTCTTCA+TGG | + | chr3_3:64847742-64847761 | Msa0464700:intron | 25.0% |
| !!! | GACAAAAACAAGTTTTAAGT+TGG | - | chr3_3:64847780-64847799 | None:intergenic | 25.0% |
| ! | TGAGATATATGCATAGTTTA+TGG | - | chr3_3:64848111-64848130 | None:intergenic | 25.0% |
| ! | ATGCATATATCTCACTATTA+TGG | + | chr3_3:64848117-64848136 | Msa0464700:intron | 25.0% |
| ! | AGTTTCATTTACCTTTATTG+GGG | - | chr3_3:64848249-64848268 | None:intergenic | 25.0% |
| ! | GAGTTTCATTTACCTTTATT+GGG | - | chr3_3:64848250-64848269 | None:intergenic | 25.0% |
| ! | CATACACAATTTATATGAGA+TGG | - | chr3_3:64848272-64848291 | None:intergenic | 25.0% |
| ! | AATGAATGAACAACATAACA+AGG | + | chr3_3:64848293-64848312 | Msa0464700:intron | 25.0% |
| !!! | AGTCTTTTTGTATTTAGGAT+TGG | - | chr3_3:64848384-64848403 | None:intergenic | 25.0% |
| ! | AATCCTAAATACAAAAAGAC+TGG | + | chr3_3:64848383-64848402 | Msa0464700:CDS | 25.0% |
| ! | ATCCTAAATACAAAAAGACT+GGG | + | chr3_3:64848384-64848403 | Msa0464700:CDS | 25.0% |
| ! | AATAGCACTAGTATATAAAG+GGG | - | chr3_3:64848777-64848796 | None:intergenic | 25.0% |
| ! | CTAATAGCACTAGTATATAA+AGG | - | chr3_3:64848779-64848798 | None:intergenic | 25.0% |
| ! | TGTTAGCATACAATTGAATA+AGG | - | chr3_3:64848813-64848832 | None:intergenic | 25.0% |
| ! | ATGATTCTCAACATATAATG+AGG | + | chr3_3:64849296-64849315 | Msa0464700:intron | 25.0% |
| ! | TGATTCTCAACATATAATGA+GGG | + | chr3_3:64849297-64849316 | Msa0464700:intron | 25.0% |
| ! | AGTTGGAAAATTATCTAGTT+AGG | - | chr3_3:64849694-64849713 | None:intergenic | 25.0% |
| !! | ACATATTCTTTTAGACTGAA+AGG | + | chr3_3:64850047-64850066 | Msa0464700:intron | 25.0% |
| ! | TAATATAACTCACCAGAATT+TGG | - | chr3_3:64850213-64850232 | None:intergenic | 25.0% |
| ! | TATTAATGCTAAACATGTCA+TGG | - | chr3_3:64850249-64850268 | None:intergenic | 25.0% |
| ! | ACAACATAGAAGCTATTTAT+AGG | + | chr3_3:64850479-64850498 | Msa0464700:intron | 25.0% |
| !! | ATTTTCATCCTTATAGTTCA+TGG | + | chr3_3:64850649-64850668 | Msa0464700:intron | 25.0% |
| ! | TTGCAAGTGAAAAATAAACT+AGG | + | chr3_3:64850695-64850714 | Msa0464700:intron | 25.0% |
| !! | TTTTCGTCATTAATTAGGAA+TGG | - | chr3_3:64850734-64850753 | None:intergenic | 25.0% |
| ! | TCCTAATTAATGACGAAAAT+TGG | + | chr3_3:64850735-64850754 | Msa0464700:intron | 25.0% |
| !! | TCCAATTTTCGTCATTAATT+AGG | - | chr3_3:64850739-64850758 | None:intergenic | 25.0% |
| !! | AAAGTAGACATTGCATTTTA+TGG | + | chr3_3:64851015-64851034 | Msa0464700:CDS | 25.0% |
| ! | AGTAGTTATACCTGATAAAT+GGG | - | chr3_3:64851069-64851088 | None:intergenic | 25.0% |
| ! | TAGTAGTTATACCTGATAAA+TGG | - | chr3_3:64851070-64851089 | None:intergenic | 25.0% |
| ! | CACATTTGGATAATTAGAAA+TGG | - | chr3_3:64851172-64851191 | None:intergenic | 25.0% |
| !! | ATTTTTCTTTATTCACGCAT+TGG | - | chr3_3:64851207-64851226 | None:intergenic | 25.0% |
| ! | TTGAACATAATGATAGAATC+TGG | - | chr3_3:64851739-64851758 | None:intergenic | 25.0% |
| CCTATATATAGAGAAAAACG+GGG | - | chr3_3:64844459-64844478 | None:intergenic | 30.0% | |
| AGGTAAGTTAAACATGAGTT+TGG | + | chr3_3:64844576-64844595 | Msa0464700:CDS | 30.0% | |
| ACACTTTAACCAATATCTCA+AGG | + | chr3_3:64845024-64845043 | Msa0464700:intron | 30.0% | |
| CACTTTAACCAATATCTCAA+GGG | + | chr3_3:64845025-64845044 | Msa0464700:intron | 30.0% | |
| GTGTAGAAAGTAAAATCAAG+GGG | - | chr3_3:64845265-64845284 | None:intergenic | 30.0% | |
| GGTGTAGAAAGTAAAATCAA+GGG | - | chr3_3:64845266-64845285 | None:intergenic | 30.0% | |
| AGGTGTAGAAAGTAAAATCA+AGG | - | chr3_3:64845267-64845286 | None:intergenic | 30.0% | |
| !! | CTAATTGTATCGTTTTTCTC+TGG | - | chr3_3:64845325-64845344 | None:intergenic | 30.0% |
| ! | TATAGGCTTAAATGCGATTT+TGG | + | chr3_3:64845673-64845692 | Msa0464700:intron | 30.0% |
| !!! | TCGTTTTGGTTCCAAAATAT+GGG | - | chr3_3:64845899-64845918 | None:intergenic | 30.0% |
| !!! | ATCGTTTTGGTTCCAAAATA+TGG | - | chr3_3:64845900-64845919 | None:intergenic | 30.0% |
| !! | GTTTCGAATTTTTGAAGGAT+GGG | - | chr3_3:64846095-64846114 | None:intergenic | 30.0% |
| !! | TGTTTCGAATTTTTGAAGGA+TGG | - | chr3_3:64846096-64846115 | None:intergenic | 30.0% |
| ATCCTTCAAAAATTCGAAAC+AGG | + | chr3_3:64846095-64846114 | Msa0464700:intron | 30.0% | |
| TATGCAGAATGAATTCGAAA+TGG | + | chr3_3:64846168-64846187 | Msa0464700:intron | 30.0% | |
| ATGCAGAATGAATTCGAAAT+GGG | + | chr3_3:64846169-64846188 | Msa0464700:intron | 30.0% | |
| TTCGAAATGGGTGAAAATTA+AGG | + | chr3_3:64846181-64846200 | Msa0464700:intron | 30.0% | |
| ! | TTGAGTTTGAGATTCAACAA+AGG | + | chr3_3:64846257-64846276 | Msa0464700:intron | 30.0% |
| AAAGGATTACTTAAAGAAGG+AGG | + | chr3_3:64846275-64846294 | Msa0464700:intron | 30.0% | |
| ! | TTAAGTTTGAGATTCAACAC+AGG | + | chr3_3:64846299-64846318 | Msa0464700:intron | 30.0% |
| ACATAAGAGGAAAAGATTGA+AGG | + | chr3_3:64846324-64846343 | Msa0464700:intron | 30.0% | |
| ! | ATCAACTAAACCCAGATTTT+GGG | - | chr3_3:64846498-64846517 | None:intergenic | 30.0% |
| !! | GTTTAGTTGATGAATGATGA+AGG | + | chr3_3:64846507-64846526 | Msa0464700:intron | 30.0% |
| !! | GTTTAGTTGATGAATGATGA+AGG | + | chr3_3:64846507-64846526 | Msa0464700:intron | 30.0% |
| ! | TTTATCTCTGTTACCTGTTT+TGG | - | chr3_3:64846628-64846647 | None:intergenic | 30.0% |
| CTATTTATTTGGTATCGCTT+TGG | - | chr3_3:64846689-64846708 | None:intergenic | 30.0% | |
| TGGTCCCTTAACTATTTATT+TGG | - | chr3_3:64845693-64845712 | None:intergenic | 30.0% | |
| ! | AATAGGCTTAAATGCGTTTT+TGG | - | chr3_3:64846720-64846739 | None:intergenic | 30.0% |
| ! | TATGTTTTCTCTCTCTGTTT+TGG | + | chr3_3:64847053-64847072 | Msa0464700:intron | 30.0% |
| CAATGTGATTTAAGTCATGT+TGG | + | chr3_3:64847329-64847348 | Msa0464700:intron | 30.0% | |
| ! | TGACCCCTTAATTTTATGTT+TGG | + | chr3_3:64847458-64847477 | Msa0464700:intron | 30.0% |
| ! | GACCCCTTAATTTTATGTTT+GGG | + | chr3_3:64847459-64847478 | Msa0464700:intron | 30.0% |
| ! | ACCCCTTAATTTTATGTTTG+GGG | + | chr3_3:64847460-64847479 | Msa0464700:intron | 30.0% |
| ACCCCAAACATAAAATTAAG+GGG | - | chr3_3:64847464-64847483 | None:intergenic | 30.0% | |
| GACCCCAAACATAAAATTAA+GGG | - | chr3_3:64847465-64847484 | None:intergenic | 30.0% | |
| !!! | AACTTATTTTTTGGGTCTGA+CGG | + | chr3_3:64847494-64847513 | Msa0464700:intron | 30.0% |
| ACATAAGGTTTACTAGACAT+AGG | - | chr3_3:64847560-64847579 | None:intergenic | 30.0% | |
| GATTTAAGGAACATGACATA+AGG | - | chr3_3:64847575-64847594 | None:intergenic | 30.0% | |
| GAAACTCTCATTGGATAAAT+TGG | - | chr3_3:64847597-64847616 | None:intergenic | 30.0% | |
| GTGAAAAAAGAAACTCTCAT+TGG | - | chr3_3:64847606-64847625 | None:intergenic | 30.0% | |
| AACAAAATATTTGAAAGGGG+AGG | + | chr3_3:64847716-64847735 | Msa0464700:intron | 30.0% | |
| ACAAAATATTTGAAAGGGGA+GGG | + | chr3_3:64847717-64847736 | Msa0464700:intron | 30.0% | |
| ! | ACTGTATTGAAGGATGATTT+TGG | + | chr3_3:64847827-64847846 | Msa0464700:intron | 30.0% |
| !! | TTGGAGGATTTTAGAAGATT+AGG | + | chr3_3:64847846-64847865 | Msa0464700:intron | 30.0% |
| GGAGTTTCATTTACCTTTAT+TGG | - | chr3_3:64848251-64848270 | None:intergenic | 30.0% | |
| TTATAATCAACACACATGAG+AGG | - | chr3_3:64848324-64848343 | None:intergenic | 30.0% | |
| !! | TTTTGTATTTAGGATTGGAG+TGG | - | chr3_3:64848379-64848398 | None:intergenic | 30.0% |
| ! | TTCCCAGTCTTTTTGTATTT+AGG | - | chr3_3:64848389-64848408 | None:intergenic | 30.0% |
| TCAGTAGATATGACTTACAT+TGG | - | chr3_3:64848483-64848502 | None:intergenic | 30.0% | |
| ! | TTTTGTCTTTGCTTAGATGT+AGG | + | chr3_3:64848534-64848553 | Msa0464700:intron | 30.0% |
| ! | ATATACTAGTGCTATTAGAG+AGG | + | chr3_3:64848581-64848600 | Msa0464700:intron | 30.0% |
| ! | TATACTAGTGCTATTAGAGA+GGG | + | chr3_3:64848582-64848601 | Msa0464700:intron | 30.0% |
| ACGATTAAATGTCAATGTTC+CGG | - | chr3_3:64849209-64849228 | None:intergenic | 30.0% | |
| TTTAATGCACACCTCATATT+TGG | - | chr3_3:64849413-64849432 | None:intergenic | 30.0% | |
| TTGCAACGTGTTATCATATT+CGG | + | chr3_3:64849610-64849629 | Msa0464700:CDS | 30.0% | |
| !! | TTGAAGCTTGATTTGTACAA+TGG | + | chr3_3:64849734-64849753 | Msa0464700:intron | 30.0% |
| !! | TGAAGCTTGATTTGTACAAT+GGG | + | chr3_3:64849735-64849754 | Msa0464700:intron | 30.0% |
| GAATATGCTAATTATCAACC+TGG | + | chr3_3:64849812-64849831 | Msa0464700:CDS | 30.0% | |
| ! | ATTGACATTGTTTTCCACAT+AGG | + | chr3_3:64849878-64849897 | Msa0464700:CDS | 30.0% |
| ! | CAACTGAATTTTTCACTACT+TGG | + | chr3_3:64850287-64850306 | Msa0464700:intron | 30.0% |
| AGAAATAATTACGCAACCAT+TGG | - | chr3_3:64850338-64850357 | None:intergenic | 30.0% | |
| ATAGAAGCTATTTATAGGCA+TGG | + | chr3_3:64850484-64850503 | Msa0464700:intron | 30.0% | |
| GCTTGCAAATAAAACAGTTA+GGG | - | chr3_3:64850557-64850576 | None:intergenic | 30.0% | |
| AGCTTGCAAATAAAACAGTT+AGG | - | chr3_3:64850558-64850577 | None:intergenic | 30.0% | |
| CAAGTGAAAAATAAACTAGG+AGG | + | chr3_3:64850698-64850717 | Msa0464700:intron | 30.0% | |
| TAGATAGAAAACAACAACCA+TGG | + | chr3_3:64850875-64850894 | Msa0464700:CDS | 30.0% | |
| GTAGTTATACCTGATAAATG+GGG | - | chr3_3:64851068-64851087 | None:intergenic | 30.0% | |
| GGATAATTAGAAATGGATGT+AGG | - | chr3_3:64851165-64851184 | None:intergenic | 30.0% | |
| ! | ATTTTCAGAGACAAAGACTA+TGG | + | chr3_3:64851325-64851344 | Msa0464700:CDS | 30.0% |
| ! | ATGATTCTTTTACCATTTCC+AGG | + | chr3_3:64851422-64851441 | Msa0464700:CDS | 30.0% |
| ! | TGATTCTTTTACCATTTCCA+GGG | + | chr3_3:64851423-64851442 | Msa0464700:CDS | 30.0% |
| !! | CCCCGTTTTTCTCTATATAT+AGG | + | chr3_3:64844456-64844475 | Msa0464700:five_prime_UTR | 35.0% |
| TCTACTTAAAAGGCTCTTGA+TGG | - | chr3_3:64844490-64844509 | None:intergenic | 35.0% | |
| !! | ATCAAGAGCCTTTTAAGTAG+AGG | + | chr3_3:64844489-64844508 | Msa0464700:five_prime_UTR | 35.0% |
| !! | TCAAGAGCCTTTTAAGTAGA+GGG | + | chr3_3:64844490-64844509 | Msa0464700:five_prime_UTR | 35.0% |
| TACTTCACCCTCTACTTAAA+AGG | - | chr3_3:64844500-64844519 | None:intergenic | 35.0% | |
| ATCTGTTTGGGTGATATGAA+TGG | + | chr3_3:64844631-64844650 | Msa0464700:CDS | 35.0% | |
| ! | TTGGGTGATATGAATGGATT+TGG | + | chr3_3:64844637-64844656 | Msa0464700:CDS | 35.0% |
| ! | TGAATGGCAATCTTTGAAAG+TGG | - | chr3_3:64844670-64844689 | None:intergenic | 35.0% |
| AATGAATGCCCTTGAGATAT+TGG | - | chr3_3:64845036-64845055 | None:intergenic | 35.0% | |
| TTACTTTCTACACCTGTTTG+AGG | + | chr3_3:64845272-64845291 | Msa0464700:intron | 35.0% | |
| ! | GAGTTAGTACCTGTTTGTTA+CGG | - | chr3_3:64845533-64845552 | None:intergenic | 35.0% |
| ! | TTTATCTCCGTTACCTGTTT+TGG | + | chr3_3:64845765-64845784 | Msa0464700:intron | 35.0% |
| TGATGAAGATCATGAAGAAC+AGG | - | chr3_3:64845861-64845880 | None:intergenic | 35.0% | |
| ! | TTTGGTTCCAAAATATGGGT+TGG | - | chr3_3:64845895-64845914 | None:intergenic | 35.0% |
| !! | TGAAGGATGGGTTTTTCTAA+AGG | - | chr3_3:64846083-64846102 | None:intergenic | 35.0% |
| ! | CTCCTGTTTCGAATTTTTGA+AGG | - | chr3_3:64846100-64846119 | None:intergenic | 35.0% |
| AAGAGATTGAGGTTGTAAAC+AGG | + | chr3_3:64846227-64846246 | Msa0464700:intron | 35.0% | |
| ! | CATCAACTAAACCCAGATTT+TGG | - | chr3_3:64846499-64846518 | None:intergenic | 35.0% |
| TTGATGAATGATGAAGGTCT+GGG | + | chr3_3:64846513-64846532 | Msa0464700:intron | 35.0% | |
| !!! | GAATGATGAAGGTTTTGAGA+AGG | + | chr3_3:64846546-64846565 | Msa0464700:intron | 35.0% |
| AGTTGTACTCATACTATTGC+AGG | + | chr3_3:64846744-64846763 | Msa0464700:intron | 35.0% | |
| GTTGTACTCATACTATTGCA+GGG | + | chr3_3:64846745-64846764 | Msa0464700:intron | 35.0% | |
| ! | AGTCTTCATTAGTTGGTTCT+GGG | - | chr3_3:64846807-64846826 | None:intergenic | 35.0% |
| AGAACCAACTAATGAAGACT+GGG | + | chr3_3:64846807-64846826 | Msa0464700:CDS | 35.0% | |
| ! | GTATGTTACTTGAAGTTTGC+AGG | - | chr3_3:64846847-64846866 | None:intergenic | 35.0% |
| ACAGAGAGAGAAAACATAAG+AGG | - | chr3_3:64847051-64847070 | None:intergenic | 35.0% | |
| CATGTGACTAAGTGTAGATA+AGG | - | chr3_3:64847205-64847224 | None:intergenic | 35.0% | |
| AACCAACGTGAGTTAACTTA+CGG | + | chr3_3:64847269-64847288 | Msa0464700:intron | 35.0% | |
| GAACGTTACTTAAGTTACGT+AGG | + | chr3_3:64847298-64847317 | Msa0464700:intron | 35.0% | |
| GGACCCCAAACATAAAATTA+AGG | - | chr3_3:64847466-64847485 | None:intergenic | 35.0% | |
| ACTAGACATAGGTATGACAA+GGG | - | chr3_3:64847549-64847568 | None:intergenic | 35.0% | |
| TACTAGACATAGGTATGACA+AGG | - | chr3_3:64847550-64847569 | None:intergenic | 35.0% | |
| AACCGTTCGCATCTAAAAAA+GGG | + | chr3_3:64847642-64847661 | Msa0464700:intron | 35.0% | |
| !!! | ATCCCTTTTTTAGATGCGAA+CGG | - | chr3_3:64847647-64847666 | None:intergenic | 35.0% |
| TTCGCATCTAAAAAAGGGAT+GGG | + | chr3_3:64847647-64847666 | Msa0464700:intron | 35.0% | |
| ! | GTATTGAAGGATGATTTTGG+AGG | + | chr3_3:64847830-64847849 | Msa0464700:intron | 35.0% |
| ATGGCTGAAAAACGAACTAA+AGG | + | chr3_3:64848136-64848155 | Msa0464700:intron | 35.0% | |
| ! | TTCTCCTTTGCACTATTTTC+AGG | + | chr3_3:64848449-64848468 | Msa0464700:CDS | 35.0% |
| ! | ATACTAGTGCTATTAGAGAG+GGG | + | chr3_3:64848583-64848602 | Msa0464700:intron | 35.0% |
| TGTACAATACACCAAATGGT+GGG | + | chr3_3:64848703-64848722 | Msa0464700:intron | 35.0% | |
| ! | TTTGAAACTGCAACAAGCTT+AGG | - | chr3_3:64848862-64848881 | None:intergenic | 35.0% |
| ! | AAGCTGTACCATTTGTTGAA+TGG | + | chr3_3:64849149-64849168 | Msa0464700:CDS | 35.0% |
| ! | AGCTGTACCATTTGTTGAAT+GGG | + | chr3_3:64849150-64849169 | Msa0464700:CDS | 35.0% |
| TTTAATCGTAACAGCATGTG+TGG | + | chr3_3:64849220-64849239 | Msa0464700:CDS | 35.0% | |
| ! | GGGACATTTTGTTAATCTGT+AGG | + | chr3_3:64849317-64849336 | Msa0464700:intron | 35.0% |
| AAACCTGTGTGTATAAAACC+AGG | - | chr3_3:64849374-64849393 | None:intergenic | 35.0% | |
| TATTTGGCCAAAGTTCTTCA+AGG | - | chr3_3:64849397-64849416 | None:intergenic | 35.0% | |
| AAGAACTTTGGCCAAATATG+AGG | + | chr3_3:64849399-64849418 | Msa0464700:CDS | 35.0% | |
| !! | GAGTAAGAGGTATTCATTCA+AGG | + | chr3_3:64849561-64849580 | Msa0464700:CDS | 35.0% |
| !! | AATGAGTTTTGTCCAGGATA+AGG | - | chr3_3:64849592-64849611 | None:intergenic | 35.0% |
| ! | TGTTATCATATTCGGTGACA+TGG | + | chr3_3:64849618-64849637 | Msa0464700:CDS | 35.0% |
| ! | GTTATCATATTCGGTGACAT+GGG | + | chr3_3:64849619-64849638 | Msa0464700:CDS | 35.0% |
| !! | GAAGCTTGATTTGTACAATG+GGG | + | chr3_3:64849736-64849755 | Msa0464700:intron | 35.0% |
| ! | AATGGGGAGAACACTTATTT+TGG | + | chr3_3:64849752-64849771 | Msa0464700:intron | 35.0% |
| !!! | TTTTGGTTCACATGTCCTTT+AGG | + | chr3_3:64849769-64849788 | Msa0464700:intron | 35.0% |
| GAGATGTATCCATTTGCATA+TGG | - | chr3_3:64849911-64849930 | None:intergenic | 35.0% | |
| AAATGGATACATCTCACAGT+GGG | + | chr3_3:64849916-64849935 | Msa0464700:CDS | 35.0% | |
| CAGTTCCATATATGATAGCA+AGG | + | chr3_3:64849975-64849994 | Msa0464700:CDS | 35.0% | |
| CACATTTATTCATACTGCAG+TGG | + | chr3_3:64850074-64850093 | Msa0464700:intron | 35.0% | |
| TAATAGTACATGGTTTCTGC+AGG | - | chr3_3:64850173-64850192 | None:intergenic | 35.0% | |
| GAGAGTTTGAGAATAATGAG+AGG | + | chr3_3:64850418-64850437 | Msa0464700:intron | 35.0% | |
| TTTGCAGATATCATGAATGC+TGG | - | chr3_3:64850623-64850642 | None:intergenic | 35.0% | |
| CCATGATTCCATGAACTATA+AGG | - | chr3_3:64850660-64850679 | None:intergenic | 35.0% | |
| CCTTATAGTTCATGGAATCA+TGG | + | chr3_3:64850657-64850676 | Msa0464700:intron | 35.0% | |
| GACGAAAATTGGAAATATGC+AGG | + | chr3_3:64850746-64850765 | Msa0464700:intron | 35.0% | |
| ! | GTTTTCTATCTACTGTTGCA+AGG | - | chr3_3:64850867-64850886 | None:intergenic | 35.0% |
| GGTTCTGCATTATACACATT+TGG | - | chr3_3:64851186-64851205 | None:intergenic | 35.0% | |
| GGAACAATTCATGTTGTTGT+TGG | + | chr3_3:64851250-64851269 | Msa0464700:CDS | 35.0% | |
| ! | ACAATTCATGTTGTTGTTGG+TGG | + | chr3_3:64851253-64851272 | Msa0464700:CDS | 35.0% |
| ! | TCTCTGAAAATACTCCAAAC+AGG | - | chr3_3:64851316-64851335 | None:intergenic | 35.0% |
| ! | AGAGACAAAGACTATGGTTT+TGG | + | chr3_3:64851331-64851350 | Msa0464700:CDS | 35.0% |
| GAGTACAAGAAAAGTAGTGA+TGG | + | chr3_3:64851391-64851410 | Msa0464700:CDS | 35.0% | |
| ! | CAAGAAAAGTAGTGATGGAA+AGG | + | chr3_3:64851396-64851415 | Msa0464700:CDS | 35.0% |
| CTTAAAAGGCTCTTGATGGA+GGG | - | chr3_3:64844486-64844505 | None:intergenic | 40.0% | |
| ACTTAAAAGGCTCTTGATGG+AGG | - | chr3_3:64844487-64844506 | None:intergenic | 40.0% | |
| ACCAACTTGAGGATCTGTTT+GGG | + | chr3_3:64844619-64844638 | Msa0464700:CDS | 40.0% | |
| !!! | CGCAAGAATGGTTTTGTGAA+TGG | - | chr3_3:64844686-64844705 | None:intergenic | 40.0% |
| AGAATCATGGATCGCAAGAA+TGG | - | chr3_3:64844698-64844717 | None:intergenic | 40.0% | |
| ACCTTACTGCCAAGCAAAAA+GGG | - | chr3_3:64844739-64844758 | None:intergenic | 40.0% | |
| TACCTTACTGCCAAGCAAAA+AGG | - | chr3_3:64844740-64844759 | None:intergenic | 40.0% | |
| !! | TTGTATCGTTTTTCTCTGGC+TGG | - | chr3_3:64845321-64845340 | None:intergenic | 40.0% |
| TAATAGCCTGTTTGGTACAG+TGG | + | chr3_3:64845406-64845425 | Msa0464700:intron | 40.0% | |
| AATCACGGTAGGTTAGCATT+GGG | - | chr3_3:64845452-64845471 | None:intergenic | 40.0% | |
| AAATCACGGTAGGTTAGCAT+TGG | - | chr3_3:64845453-64845472 | None:intergenic | 40.0% | |
| ! | GCTAACCTACCGTGATTTTT+AGG | + | chr3_3:64845455-64845474 | Msa0464700:intron | 40.0% |
| AGCTTCCTAAAAATCACGGT+AGG | - | chr3_3:64845463-64845482 | None:intergenic | 40.0% | |
| ! | TTGTAGCTTTTGCCAAAACG+TGG | + | chr3_3:64845488-64845507 | Msa0464700:intron | 40.0% |
| ! | TGTAGCTTTTGCCAAAACGT+GGG | + | chr3_3:64845489-64845508 | Msa0464700:intron | 40.0% |
| !! | AAAAGCATGTACCCACGTTT+TGG | - | chr3_3:64845503-64845522 | None:intergenic | 40.0% |
| ! | TTAGTACCTGTTTGTTACGG+CGG | - | chr3_3:64845530-64845549 | None:intergenic | 40.0% |
| TTAATGGAAGGGACCAAAAC+AGG | - | chr3_3:64845781-64845800 | None:intergenic | 40.0% | |
| ATCATGAAGAACAGGATGGA+AGG | - | chr3_3:64845853-64845872 | None:intergenic | 40.0% | |
| GAAGATCATGAAGAACAGGA+TGG | - | chr3_3:64845857-64845876 | None:intergenic | 40.0% | |
| ! | CAACACACCAACCCATATTT+TGG | + | chr3_3:64845885-64845904 | Msa0464700:intron | 40.0% |
| !! | AGGATGGGTTTTTCTAAAGG+AGG | - | chr3_3:64846080-64846099 | None:intergenic | 40.0% |
| TTCGAAACAGGAGAAGAGTA+AGG | + | chr3_3:64846107-64846126 | Msa0464700:intron | 40.0% | |
| ! | AGTTTTGCGAGAAGAGATTG+AGG | + | chr3_3:64846216-64846235 | Msa0464700:intron | 40.0% |
| TTCAACACAGGACACATAAG+AGG | + | chr3_3:64846311-64846330 | Msa0464700:intron | 40.0% | |
| !! | ATCGTTTTGGTCCCAAAATC+TGG | + | chr3_3:64846484-64846503 | Msa0464700:intron | 40.0% |
| !! | TCGTTTTGGTCCCAAAATCT+GGG | + | chr3_3:64846485-64846504 | Msa0464700:intron | 40.0% |
| ! | GTTGATGAATGATGAAGGTC+TGG | + | chr3_3:64846512-64846531 | Msa0464700:intron | 40.0% |
| TTAACGGAAAGGACCAAAAC+AGG | + | chr3_3:64846612-64846631 | Msa0464700:intron | 40.0% | |
| AGAATGGGTGACAGTAAAAC+TGG | + | chr3_3:64846777-64846796 | Msa0464700:CDS | 40.0% | |
| !! | GTCTTCATTAGTTGGTTCTG+GGG | - | chr3_3:64846806-64846825 | None:intergenic | 40.0% |
| ! | CAGTCTTCATTAGTTGGTTC+TGG | - | chr3_3:64846808-64846827 | None:intergenic | 40.0% |
| CAGAACCAACTAATGAAGAC+TGG | + | chr3_3:64846806-64846825 | Msa0464700:CDS | 40.0% | |
| TTCAGCTCCATAACATTGCA+TGG | + | chr3_3:64847117-64847136 | Msa0464700:intron | 40.0% | |
| ATGGCTACCATGCAATGTTA+TGG | - | chr3_3:64847127-64847146 | None:intergenic | 40.0% | |
| CTTAGTCACATGAAACACCT+TGG | + | chr3_3:64847213-64847232 | Msa0464700:intron | 40.0% | |
| ! | CAGAATGTTGCTTACATCCA+AGG | - | chr3_3:64847233-64847252 | None:intergenic | 40.0% |
| GTGAGTTAACTTACGGTGTT+TGG | + | chr3_3:64847276-64847295 | Msa0464700:intron | 40.0% | |
| !!! | AGTCACGTGGAGAGTATTTT+AGG | + | chr3_3:64847373-64847392 | Msa0464700:intron | 40.0% |
| GAACCGTTCGCATCTAAAAA+AGG | + | chr3_3:64847641-64847660 | Msa0464700:intron | 40.0% | |
| GTTCGCATCTAAAAAAGGGA+TGG | + | chr3_3:64847646-64847665 | Msa0464700:intron | 40.0% | |
| CATCTAAAAAAGGGATGGGA+GGG | + | chr3_3:64847651-64847670 | Msa0464700:intron | 40.0% | |
| ATCTAAAAAAGGGATGGGAG+GGG | + | chr3_3:64847652-64847671 | Msa0464700:intron | 40.0% | |
| TATTTGAAAGGGGAGGGTTT+AGG | + | chr3_3:64847723-64847742 | Msa0464700:intron | 40.0% | |
| AAAAAGGATGGGAGAACTTC+GGG | - | chr3_3:64848052-64848071 | None:intergenic | 40.0% | |
| GAAAAAGGATGGGAGAACTT+CGG | - | chr3_3:64848053-64848072 | None:intergenic | 40.0% | |
| GAGTTTGGAGGAAAAAGGAT+GGG | - | chr3_3:64848063-64848082 | None:intergenic | 40.0% | |
| AGAGTTTGGAGGAAAAAGGA+TGG | - | chr3_3:64848064-64848083 | None:intergenic | 40.0% | |
| TTGGAGAGTTTGGAGGAAAA+AGG | - | chr3_3:64848068-64848087 | None:intergenic | 40.0% | |
| GTTTATGGCCATGACTCTTT+AGG | - | chr3_3:64848096-64848115 | None:intergenic | 40.0% | |
| ! | GTATTTAGGATTGGAGTGGT+TGG | - | chr3_3:64848375-64848394 | None:intergenic | 40.0% |
| ! | CTGCACGTTGATTGATCAAT+TGG | - | chr3_3:64848427-64848446 | None:intergenic | 40.0% |
| !! | TCCTTTGCACTATTTTCAGG+TGG | + | chr3_3:64848452-64848471 | Msa0464700:CDS | 40.0% |
| TCCACCTGAAAATAGTGCAA+AGG | - | chr3_3:64848456-64848475 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr3_3:64848628-64848647 | Msa0464700:intron | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | + | chr3_3:64848671-64848690 | Msa0464700:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | + | chr3_3:64848672-64848691 | Msa0464700:intron | 40.0% | |
| ! | CTTACCCTGTTTTACACAAG+AGG | - | chr3_3:64848679-64848698 | None:intergenic | 40.0% |
| CTCTTGTGTAAAACAGGGTA+AGG | + | chr3_3:64848677-64848696 | Msa0464700:intron | 40.0% | |
| GCTGTGTACAATACACCAAA+TGG | + | chr3_3:64848699-64848718 | Msa0464700:intron | 40.0% | |
| GTGTACAATACACCAAATGG+TGG | + | chr3_3:64848702-64848721 | Msa0464700:intron | 40.0% | |
| TAGTATATAAAGGGGCAACC+CGG | - | chr3_3:64848769-64848788 | None:intergenic | 40.0% | |
| TATGACAGATGACAGTTACC+TGG | + | chr3_3:64849104-64849123 | Msa0464700:intron | 40.0% | |
| TATGTCATATCCACTTGTCC+AGG | - | chr3_3:64849125-64849144 | None:intergenic | 40.0% | |
| ! | GCTGTACCATTTGTTGAATG+GGG | + | chr3_3:64849151-64849170 | Msa0464700:CDS | 40.0% |
| !!! | GATCCTGGTTTTATACACAC+AGG | + | chr3_3:64849368-64849387 | Msa0464700:CDS | 40.0% |
| CAGGTTTCCTTGAAGAACTT+TGG | + | chr3_3:64849387-64849406 | Msa0464700:CDS | 40.0% | |
| CAATAAATGCCCCAACCTAT+AGG | - | chr3_3:64849521-64849540 | None:intergenic | 40.0% | |
| ! | TTGGGGCATTTATTGTCTGA+TGG | + | chr3_3:64849526-64849545 | Msa0464700:CDS | 40.0% |
| TGTCTGATGGCTCTTATGTA+TGG | + | chr3_3:64849539-64849558 | Msa0464700:CDS | 40.0% | |
| GCTCTTATGTATGGAGTAAG+AGG | + | chr3_3:64849548-64849567 | Msa0464700:CDS | 40.0% | |
| TGTCTAAATCCTTGATGAGC+TGG | - | chr3_3:64849856-64849875 | None:intergenic | 40.0% | |
| CAAATGGATACATCTCACAG+TGG | + | chr3_3:64849915-64849934 | Msa0464700:CDS | 40.0% | |
| ! | GCGAACCTTGCTATCATATA+TGG | - | chr3_3:64849983-64850002 | None:intergenic | 40.0% |
| ! | CGCTTGCTTGCAATCATTTT+AGG | + | chr3_3:64850000-64850019 | Msa0464700:intron | 40.0% |
| TCATAGAAGGATCCTGAGTT+TGG | - | chr3_3:64850119-64850138 | None:intergenic | 40.0% | |
| ! | TGAATCTGGAGTGTCATAGA+AGG | - | chr3_3:64850132-64850151 | None:intergenic | 40.0% |
| TTCTATGACACTCCAGATTC+AGG | + | chr3_3:64850131-64850150 | Msa0464700:CDS | 40.0% | |
| !! | ATTTGGCTTTGTTCTCAGCA+GGG | - | chr3_3:64850196-64850215 | None:intergenic | 40.0% |
| !! | AATTTGGCTTTGTTCTCAGC+AGG | - | chr3_3:64850197-64850216 | None:intergenic | 40.0% |
| CTGAGAACAAAGCCAAATTC+TGG | + | chr3_3:64850198-64850217 | Msa0464700:CDS | 40.0% | |
| TAATTACGCAACCATTGGTC+AGG | - | chr3_3:64850333-64850352 | None:intergenic | 40.0% | |
| ACGAAACATGCCATAATCTG+TGG | - | chr3_3:64850776-64850795 | None:intergenic | 40.0% | |
| TGTGCTGCAAAGATTAACCA+TGG | - | chr3_3:64850895-64850914 | None:intergenic | 40.0% | |
| TCGGTTACTCCTCTAATGAT+TGG | + | chr3_3:64850923-64850942 | Msa0464700:CDS | 40.0% | |
| CTTGGCATACCAATCATTAG+AGG | - | chr3_3:64850935-64850954 | None:intergenic | 40.0% | |
| CTCTAATGATTGGTATGCCA+AGG | + | chr3_3:64850933-64850952 | Msa0464700:CDS | 40.0% | |
| TAATGATTGGTATGCCAAGG+AGG | + | chr3_3:64850936-64850955 | Msa0464700:CDS | 40.0% | |
| AATGATTGGTATGCCAAGGA+GGG | + | chr3_3:64850937-64850956 | Msa0464700:CDS | 40.0% | |
| GGCATACTCTTTCGTAGTTA+TGG | - | chr3_3:64851047-64851066 | None:intergenic | 40.0% | |
| ! | AAGAGTATGCCCCATTTATC+AGG | + | chr3_3:64851056-64851075 | Msa0464700:CDS | 40.0% |
| TAGAAATGGATGTAGGCTGT+CGG | - | chr3_3:64851158-64851177 | None:intergenic | 40.0% | |
| CATTATTCTGGCACTGTGAA+TGG | + | chr3_3:64851229-64851248 | Msa0464700:CDS | 40.0% | |
| ! | ATTCATGTTGTTGTTGGTGG+AGG | + | chr3_3:64851256-64851275 | Msa0464700:CDS | 40.0% |
| ! | TTCATGTTGTTGTTGGTGGA+GGG | + | chr3_3:64851257-64851276 | Msa0464700:CDS | 40.0% |
| CTGAAAATACTCCAAACAGG+AGG | - | chr3_3:64851313-64851332 | None:intergenic | 40.0% | |
| ATCTCTATAGTCCCTGGAAA+TGG | - | chr3_3:64851437-64851456 | None:intergenic | 40.0% | |
| ! | CTACATAATTCAGAGTGCCA+AGG | - | chr3_3:64851497-64851516 | None:intergenic | 40.0% |
| !! | TCCTCAAGTTGGTGATGAAG+AGG | - | chr3_3:64844612-64844631 | None:intergenic | 45.0% |
| CACCAACTTGAGGATCTGTT+TGG | + | chr3_3:64844618-64844637 | Msa0464700:CDS | 45.0% | |
| ACCCAAACAGATCCTCAAGT+TGG | - | chr3_3:64844623-64844642 | None:intergenic | 45.0% | |
| ! | CAGTAATGGAGGCAGAATCA+TGG | - | chr3_3:64844711-64844730 | None:intergenic | 45.0% |
| CAAAAAGGGGGAAGCAGTAA+TGG | - | chr3_3:64844725-64844744 | None:intergenic | 45.0% | |
| CTTACTGCCAAGCAAAAAGG+GGG | - | chr3_3:64844737-64844756 | None:intergenic | 45.0% | |
| CCTTACTGCCAAGCAAAAAG+GGG | - | chr3_3:64844738-64844757 | None:intergenic | 45.0% | |
| AAGCTCAAATCGCCTCAAAC+AGG | - | chr3_3:64845287-64845306 | None:intergenic | 45.0% | |
| ! | TGTTTGAGGCGATTTGAGCT+TGG | + | chr3_3:64845286-64845305 | Msa0464700:intron | 45.0% |
| GAAGGGACCAAAACAGGTAA+CGG | - | chr3_3:64845775-64845794 | None:intergenic | 45.0% | |
| AAGAACAGGATGGAAGGAGA+AGG | - | chr3_3:64845847-64845866 | None:intergenic | 45.0% | |
| CCAACCCAGTCTTCATTAGT+TGG | - | chr3_3:64846814-64846833 | None:intergenic | 45.0% | |
| CCAACTAATGAAGACTGGGT+TGG | + | chr3_3:64846811-64846830 | Msa0464700:CDS | 45.0% | |
| AACATTGCATGGTAGCCATG+TGG | + | chr3_3:64847128-64847147 | Msa0464700:intron | 45.0% | |
| CCAAGGCATATCTTTCCACA+TGG | - | chr3_3:64847146-64847165 | None:intergenic | 45.0% | |
| CCATGTGGAAAGATATGCCT+TGG | + | chr3_3:64847143-64847162 | Msa0464700:intron | 45.0% | |
| ATGCCTTGGACTAACACAGA+AGG | + | chr3_3:64847157-64847176 | Msa0464700:intron | 45.0% | |
| ACTCCTTCTGTGTTAGTCCA+AGG | - | chr3_3:64847163-64847182 | None:intergenic | 45.0% | |
| CACCGTAAGTTAACTCACGT+TGG | - | chr3_3:64847274-64847293 | None:intergenic | 45.0% | |
| TGGGAGCAAGCAAATCTTGA+TGG | + | chr3_3:64847405-64847424 | Msa0464700:intron | 45.0% | |
| GGGAGCAAGCAAATCTTGAT+GGG | + | chr3_3:64847406-64847425 | Msa0464700:intron | 45.0% | |
| GCATCTAAAAAAGGGATGGG+AGG | + | chr3_3:64847650-64847669 | Msa0464700:intron | 45.0% | |
| TTAGGCGATGTTGGAGAGTT+TGG | - | chr3_3:64848078-64848097 | None:intergenic | 45.0% | |
| CATGACTCTTTAGGCGATGT+TGG | - | chr3_3:64848087-64848106 | None:intergenic | 45.0% | |
| CAACATCGCCTAAAGAGTCA+TGG | + | chr3_3:64848085-64848104 | Msa0464700:intron | 45.0% | |
| ATTGGGGCTGAGCATATGAA+TGG | - | chr3_3:64848233-64848252 | None:intergenic | 45.0% | |
| CATATGCTCAGCCCCAATAA+AGG | + | chr3_3:64848235-64848254 | Msa0464700:CDS | 45.0% | |
| CTATTAGAGAGGGGTAACCT+TGG | + | chr3_3:64848592-64848611 | Msa0464700:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | + | chr3_3:64848634-64848653 | Msa0464700:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | + | chr3_3:64848635-64848654 | Msa0464700:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr3_3:64848668-64848687 | None:intergenic | 45.0% |
| TCCAAGACTTTCCATGAGCA+AGG | - | chr3_3:64848927-64848946 | None:intergenic | 45.0% | |
| ATGACAGTTACCTGGACAAG+TGG | + | chr3_3:64849112-64849131 | Msa0464700:CDS | 45.0% | |
| TTTGGGCCCCATTCAACAAA+TGG | - | chr3_3:64849160-64849179 | None:intergenic | 45.0% | |
| ! | ATTTGTTGAATGGGGCCCAA+AGG | + | chr3_3:64849159-64849178 | Msa0464700:CDS | 45.0% |
| TTTGTTGAATGGGGCCCAAA+GGG | + | chr3_3:64849160-64849179 | Msa0464700:CDS | 45.0% | |
| GAATCTGCTTTCCACCCTTT+GGG | - | chr3_3:64849177-64849196 | None:intergenic | 45.0% | |
| TGAATCTGCTTTCCACCCTT+TGG | - | chr3_3:64849178-64849197 | None:intergenic | 45.0% | |
| AAGCAGATTCAATCTGCTGC+CGG | + | chr3_3:64849187-64849206 | Msa0464700:CDS | 45.0% | |
| TCGTAACAGCATGTGTGGTA+TGG | + | chr3_3:64849225-64849244 | Msa0464700:intron | 45.0% | |
| ! | TTCAAGGCATCTCCTTATCC+TGG | + | chr3_3:64849577-64849596 | Msa0464700:CDS | 45.0% |
| !! | CGTTGCAATGAGTTTTGTCC+AGG | - | chr3_3:64849598-64849617 | None:intergenic | 45.0% |
| ! | CATATTCGGTGACATGGGAA+AGG | + | chr3_3:64849624-64849643 | Msa0464700:CDS | 45.0% |
| ! | TCAGTGGTGTTAAGTGAACC+AGG | - | chr3_3:64849833-64849852 | None:intergenic | 45.0% |
| CATATGGCAGATCTCCTATG+TGG | - | chr3_3:64849895-64849914 | None:intergenic | 45.0% | |
| GGAGATCTGCCATATGCAAA+TGG | + | chr3_3:64849899-64849918 | Msa0464700:CDS | 45.0% | |
| TATGACACTCCAGATTCAGG+TGG | + | chr3_3:64850134-64850153 | Msa0464700:CDS | 45.0% | |
| CTCAGCAGGGTAATAGTACA+TGG | - | chr3_3:64850183-64850202 | None:intergenic | 45.0% | |
| CAGGATCATACGTGCTATCT+TGG | - | chr3_3:64850314-64850333 | None:intergenic | 45.0% | |
| TGCAGGTATGCCACAGATTA+TGG | + | chr3_3:64850763-64850782 | Msa0464700:intron | 45.0% | |
| TAGCAGACACTGAACATGAC+TGG | + | chr3_3:64850803-64850822 | Msa0464700:CDS | 45.0% | |
| ACTGAACATGACTGGAGAGA+AGG | + | chr3_3:64850811-64850830 | Msa0464700:CDS | 45.0% | |
| ACATGACTGGAGAGAAGGAT+CGG | + | chr3_3:64850816-64850835 | Msa0464700:CDS | 45.0% | |
| CATTAGAGGAGTAACCGAGT+GGG | - | chr3_3:64850921-64850940 | None:intergenic | 45.0% | |
| TCATTAGAGGAGTAACCGAG+TGG | - | chr3_3:64850922-64850941 | None:intergenic | 45.0% | |
| CTCTTCAAATGAACCCTCCT+TGG | - | chr3_3:64850953-64850972 | None:intergenic | 45.0% | |
| GGTTCATTTGAAGAGCCCAT+GGG | + | chr3_3:64850958-64850977 | Msa0464700:CDS | 45.0% | |
| ATTTGAAGAGCCCATGGGAA+GGG | + | chr3_3:64850963-64850982 | Msa0464700:CDS | 45.0% | |
| TGCAAACTTTCCCTTCCCAT+GGG | - | chr3_3:64850976-64850995 | None:intergenic | 45.0% | |
| ATGGGAAGGGAAAGTTTGCA+GGG | + | chr3_3:64850976-64850995 | Msa0464700:CDS | 45.0% | |
| ! | TCATGTTGTTGTTGGTGGAG+GGG | + | chr3_3:64851258-64851277 | Msa0464700:CDS | 45.0% |
| CAAGACATCTCTATAGTCCC+TGG | - | chr3_3:64851443-64851462 | None:intergenic | 45.0% | |
| CAGGGACTATAGAGATGTCT+TGG | + | chr3_3:64851441-64851460 | Msa0464700:CDS | 45.0% | |
| TGGTTGTGAGAAAACCACCT+TGG | + | chr3_3:64851477-64851496 | Msa0464700:CDS | 45.0% | |
| ! | CATAATTCAGAGTGCCAAGG+TGG | - | chr3_3:64851494-64851513 | None:intergenic | 45.0% |
| !!! | ATTTTTTTGAATTTATTTAA+TGG | - | chr3_3:64845797-64845816 | None:intergenic | 5.0% |
| !! | ATAACAATATATATTAAATT+TGG | - | chr3_3:64847920-64847939 | None:intergenic | 5.0% |
| GCCTCTTCATCACCAACTTG+AGG | + | chr3_3:64844608-64844627 | Msa0464700:CDS | 50.0% | |
| AAAGGGGGAAGCAGTAATGG+AGG | - | chr3_3:64844722-64844741 | None:intergenic | 50.0% | |
| ! | ACTGCTTCCCCCTTTTTGCT+TGG | + | chr3_3:64844727-64844746 | Msa0464700:CDS | 50.0% |
| ! | CCCCTTTTTGCTTGGCAGTA+AGG | + | chr3_3:64844735-64844754 | Msa0464700:CDS | 50.0% |
| TAGCCTGTTTGGTACAGTGG+TGG | + | chr3_3:64845409-64845428 | Msa0464700:intron | 50.0% | |
| AGCCTGTTTGGTACAGTGGT+GGG | + | chr3_3:64845410-64845429 | Msa0464700:intron | 50.0% | |
| ! | GGTAGGTTAGCATTGGGAAG+TGG | - | chr3_3:64845446-64845465 | None:intergenic | 50.0% |
| ACTCATACTATTGCAGGGCG+AGG | + | chr3_3:64846750-64846769 | Msa0464700:intron | 50.0% | |
| TCCTCATCCTGCCTCAGATA+CGG | + | chr3_3:64847523-64847542 | Msa0464700:intron | 50.0% | |
| TATGACAAGGGCCGTATCTG+AGG | - | chr3_3:64847537-64847556 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr3_3:64848612-64848631 | None:intergenic | 50.0% | |
| GCCTTGCTCATGGAAAGTCT+TGG | + | chr3_3:64848923-64848942 | Msa0464700:CDS | 50.0% | |
| TACCTGGGGAAGAATAGGGA+GGG | - | chr3_3:64849496-64849515 | None:intergenic | 50.0% | |
| AACCATCACGCTCAGCCTAA+AGG | - | chr3_3:64849787-64849806 | None:intergenic | 50.0% | |
| ATCCTTGATGAGCTGGTCAG+TGG | - | chr3_3:64849849-64849868 | None:intergenic | 50.0% | |
| GTGGAAATCACGAACGCTCT+TGG | + | chr3_3:64850093-64850112 | Msa0464700:intron | 50.0% | |
| CCAGATTCAGGTGGAGAATG+CGG | + | chr3_3:64850143-64850162 | Msa0464700:CDS | 50.0% | |
| GCACGTATGATCCTGACCAA+TGG | + | chr3_3:64850319-64850338 | Msa0464700:intron | 50.0% | |
| GGGTTCATTTGAAGAGCCCA+TGG | + | chr3_3:64850957-64850976 | Msa0464700:CDS | 50.0% | |
| CATTTGAAGAGCCCATGGGA+AGG | + | chr3_3:64850962-64850981 | Msa0464700:CDS | 50.0% | |
| CTGCAAACTTTCCCTTCCCA+TGG | - | chr3_3:64850977-64850996 | None:intergenic | 50.0% | |
| CATGGGAAGGGAAAGTTTGC+AGG | + | chr3_3:64850975-64850994 | Msa0464700:CDS | 50.0% | |
| TGGGAAGGGAAAGTTTGCAG+GGG | + | chr3_3:64850977-64850996 | Msa0464700:CDS | 50.0% | |
| ! | CATGTTGTTGTTGGTGGAGG+GGG | + | chr3_3:64851259-64851278 | Msa0464700:CDS | 50.0% |
| CTCCCACCACTGTACCAAAC+AGG | - | chr3_3:64845415-64845434 | None:intergenic | 55.0% | |
| TTGCCACCGCCGTAACAAAC+AGG | + | chr3_3:64845521-64845540 | Msa0464700:intron | 55.0% | |
| ! | GTACCTGTTTGTTACGGCGG+TGG | - | chr3_3:64845527-64845546 | None:intergenic | 55.0% |
| TGCAGGGCGAGGATACAGAA+TGG | + | chr3_3:64846761-64846780 | Msa0464700:intron | 55.0% | |
| GCAGGGCGAGGATACAGAAT+GGG | + | chr3_3:64846762-64846781 | Msa0464700:intron | 55.0% | |
| TCTGCGCGACTTAAGTCACG+TGG | + | chr3_3:64847360-64847379 | Msa0464700:intron | 55.0% | |
| ! | GTATCTGAGGCAGGATGAGG+AGG | - | chr3_3:64847524-64847543 | None:intergenic | 55.0% |
| ATGGGAGGGGAGAGTCTTGA+AGG | + | chr3_3:64847665-64847684 | Msa0464700:intron | 55.0% | |
| TGGGAGAACTTCGGGAAGGA+GGG | - | chr3_3:64848044-64848063 | None:intergenic | 55.0% | |
| ATGGGAGAACTTCGGGAAGG+AGG | - | chr3_3:64848045-64848064 | None:intergenic | 55.0% | |
| AGGATGGGAGAACTTCGGGA+AGG | - | chr3_3:64848048-64848067 | None:intergenic | 55.0% | |
| GGCGATGTTGGAGAGTTTGG+AGG | - | chr3_3:64848075-64848094 | None:intergenic | 55.0% | |
| TCAACATGTCCACCCAACCC+CGG | + | chr3_3:64848185-64848204 | Msa0464700:CDS | 55.0% | |
| ATCTACCCGTCCAATGCCAC+CGG | - | chr3_3:64848207-64848226 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr3_3:64848647-64848666 | Msa0464700:intron | 55.0% | |
| CATATGCAGGGTCTGGGAAG+GGG | - | chr3_3:64848730-64848749 | None:intergenic | 55.0% | |
| GCATATGCAGGGTCTGGGAA+GGG | - | chr3_3:64848731-64848750 | None:intergenic | 55.0% | |
| CTTCCCAGACCCTGCATATG+CGG | + | chr3_3:64848730-64848749 | Msa0464700:intron | 55.0% | |
| TTCCCAGACCCTGCATATGC+GGG | + | chr3_3:64848731-64848750 | Msa0464700:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr3_3:64848742-64848761 | None:intergenic | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr3_3:64848743-64848762 | None:intergenic | 55.0% | |
| CGCGGATACACAGGTGCTTT+AGG | - | chr3_3:64848904-64848923 | None:intergenic | 55.0% | |
| GACTTTCCATGAGCAAGGCG+CGG | - | chr3_3:64848922-64848941 | None:intergenic | 55.0% | |
| TGGGGAAGAATAGGGAGGGA+AGG | - | chr3_3:64849492-64849511 | None:intergenic | 55.0% | |
| TTCCCTCCCTATTCTTCCCC+AGG | + | chr3_3:64849491-64849510 | Msa0464700:intron | 55.0% | |
| GTACCTGGGGAAGAATAGGG+AGG | - | chr3_3:64849497-64849516 | None:intergenic | 55.0% | |
| GGCGTACCTGGGGAAGAATA+GGG | - | chr3_3:64849500-64849519 | None:intergenic | 55.0% | |
| AGGCGTACCTGGGGAAGAAT+AGG | - | chr3_3:64849501-64849520 | None:intergenic | 55.0% | |
| TCTTCCCCAGGTACGCCTAT+AGG | + | chr3_3:64849503-64849522 | Msa0464700:intron | 55.0% | |
| CCAACCTATAGGCGTACCTG+GGG | - | chr3_3:64849510-64849529 | None:intergenic | 55.0% | |
| CCCAACCTATAGGCGTACCT+GGG | - | chr3_3:64849511-64849530 | None:intergenic | 55.0% | |
| CCCAGGTACGCCTATAGGTT+GGG | + | chr3_3:64849508-64849527 | Msa0464700:intron | 55.0% | |
| CCAGGTACGCCTATAGGTTG+GGG | + | chr3_3:64849509-64849528 | Msa0464700:intron | 55.0% | |
| GTCCTTTAGGCTGAGCGTGA+TGG | + | chr3_3:64849782-64849801 | Msa0464700:intron | 55.0% | |
| CACCACTGACCAGCTCATCA+AGG | + | chr3_3:64849844-64849863 | Msa0464700:CDS | 55.0% | |
| GAACGCTCTTGGCCAAACTC+AGG | + | chr3_3:64850104-64850123 | Msa0464700:CDS | 55.0% | |
| CCGCATTCTCCACCTGAATC+TGG | - | chr3_3:64850146-64850165 | None:intergenic | 55.0% | |
| TTTGCAGCACATCGCCCACT+CGG | + | chr3_3:64850904-64850923 | Msa0464700:CDS | 55.0% | |
| GGGAAAGTTTGCAGGGGCTT+TGG | + | chr3_3:64850983-64851002 | Msa0464700:CDS | 55.0% | |
| TCACCACAGCACCTCCTGTT+TGG | + | chr3_3:64851299-64851318 | Msa0464700:CDS | 55.0% | |
| !! | ACTCCAAACAGGAGGTGCTG+TGG | - | chr3_3:64851305-64851324 | None:intergenic | 55.0% |
| CTCACAACCATCGTGCACAC+AGG | - | chr3_3:64851467-64851486 | None:intergenic | 55.0% | |
| ! | GCCGTATCTGAGGCAGGATG+AGG | - | chr3_3:64847527-64847546 | None:intergenic | 60.0% |
| ! | ACAAGGGCCGTATCTGAGGC+AGG | - | chr3_3:64847533-64847552 | None:intergenic | 60.0% |
| TCTACCCGTCCAATGCCACC+GGG | - | chr3_3:64848206-64848225 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr3_3:64848601-64848620 | Msa0464700:intron | 60.0% | |
| TGGGAAGGGGTCCCACCATT+TGG | - | chr3_3:64848717-64848736 | None:intergenic | 60.0% | |
| CGCATATGCAGGGTCTGGGA+AGG | - | chr3_3:64848732-64848751 | None:intergenic | 60.0% | |
| CTCCCGCATATGCAGGGTCT+GGG | - | chr3_3:64848736-64848755 | None:intergenic | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr3_3:64848747-64848766 | Msa0464700:intron | 60.0% |
| TGAGCAAGGCGCGGATACAC+AGG | - | chr3_3:64848913-64848932 | None:intergenic | 60.0% | |
| GTGTATCCGCGCCTTGCTCA+TGG | + | chr3_3:64848913-64848932 | Msa0464700:CDS | 60.0% | |
| GTTGAATGGGGCCCAAAGGG+TGG | + | chr3_3:64849163-64849182 | Msa0464700:CDS | 60.0% | |
| ACCAGGATCACGCCAGCCAA+CGG | - | chr3_3:64849357-64849376 | None:intergenic | 60.0% | |
| CCCCAGGTACGCCTATAGGT+TGG | + | chr3_3:64849507-64849526 | Msa0464700:intron | 60.0% | |
| CCCCAACCTATAGGCGTACC+TGG | - | chr3_3:64849512-64849531 | None:intergenic | 60.0% | |
| GTCTTGGCCTGTGTGCACGA+TGG | + | chr3_3:64851457-64851476 | Msa0464700:CDS | 60.0% | |
| ACATGTCCACCCAACCCCGG+TGG | + | chr3_3:64848188-64848207 | Msa0464700:CDS | 65.0% | |
| CGTCCAATGCCACCGGGGTT+GGG | - | chr3_3:64848200-64848219 | None:intergenic | 65.0% | |
| ! | CCAACCCCGGTGGCATTGGA+CGG | + | chr3_3:64848198-64848217 | Msa0464700:CDS | 65.0% |
| ! | CAACCCCGGTGGCATTGGAC+GGG | + | chr3_3:64848199-64848218 | Msa0464700:CDS | 65.0% |
| CTACCCGTCCAATGCCACCG+GGG | - | chr3_3:64848205-64848224 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+TGG | - | chr3_3:64848737-64848756 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr3_3:64848748-64848767 | Msa0464700:intron | 65.0% |
| GGTCAACCTGCGCGAACCGT+TGG | + | chr3_3:64849338-64849357 | Msa0464700:intron | 65.0% | |
| AACCTGCGCGAACCGTTGGC+TGG | + | chr3_3:64849342-64849361 | Msa0464700:CDS | 65.0% | |
| ! | ACCGTTGGCTGGCGTGATCC+TGG | + | chr3_3:64849353-64849372 | Msa0464700:CDS | 65.0% |
| CCAATGCCACCGGGGTTGGG+TGG | - | chr3_3:64848197-64848216 | None:intergenic | 70.0% | |
| CCACCCAACCCCGGTGGCAT+TGG | + | chr3_3:64848194-64848213 | Msa0464700:CDS | 70.0% | |
| CCGTCCAATGCCACCGGGGT+TGG | - | chr3_3:64848201-64848220 | None:intergenic | 70.0% | |
| CGCCAGCCAACGGTTCGCGC+AGG | - | chr3_3:64849347-64849366 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 64844456 | 64851834 | 64844456 | ID=Msa0464700;Name=Msa0464700 |
| chr3_3 | mRNA | 64844456 | 64851834 | 64844456 | ID=Msa0464700-mRNA-1;Parent=Msa0464700;Name=Msa0464700-mRNA-1;_AED=0.13;_eAED=0.13;_QI=115|1|1|1|0.91|0.84|13|164|620 |
| chr3_3 | exon | 64844456 | 64844756 | 64844456 | ID=Msa0464700-mRNA-1:exon:14306;Parent=Msa0464700-mRNA-1 |
| chr3_3 | exon | 64846766 | 64846857 | 64846766 | ID=Msa0464700-mRNA-1:exon:14307;Parent=Msa0464700-mRNA-1 |
| chr3_3 | exon | 64848181 | 64848256 | 64848181 | ID=Msa0464700-mRNA-1:exon:14308;Parent=Msa0464700-mRNA-1 |
| chr3_3 | exon | 64848362 | 64848484 | 64848362 | ID=Msa0464700-mRNA-1:exon:14309;Parent=Msa0464700-mRNA-1 |
| chr3_3 | exon | 64848859 | 64848951 | 64848859 | ID=Msa0464700-mRNA-1:exon:14310;Parent=Msa0464700-mRNA-1 |
| chr3_3 | exon | 64849112 | 64849241 | 64849112 | ID=Msa0464700-mRNA-1:exon:14311;Parent=Msa0464700-mRNA-1 |
| chr3_3 | exon | 64849339 | 64849420 | 64849339 | ID=Msa0464700-mRNA-1:exon:14312;Parent=Msa0464700-mRNA-1 |
| chr3_3 | exon | 64849513 | 64849645 | 64849513 | ID=Msa0464700-mRNA-1:exon:14313;Parent=Msa0464700-mRNA-1 |
| chr3_3 | exon | 64849791 | 64849996 | 64849791 | ID=Msa0464700-mRNA-1:exon:14314;Parent=Msa0464700-mRNA-1 |
| chr3_3 | exon | 64850094 | 64850219 | 64850094 | ID=Msa0464700-mRNA-1:exon:14315;Parent=Msa0464700-mRNA-1 |
| chr3_3 | exon | 64850768 | 64851077 | 64850768 | ID=Msa0464700-mRNA-1:exon:14316;Parent=Msa0464700-mRNA-1 |
| chr3_3 | exon | 64851202 | 64851576 | 64851202 | ID=Msa0464700-mRNA-1:exon:14317;Parent=Msa0464700-mRNA-1 |
| chr3_3 | exon | 64851740 | 64851834 | 64851740 | ID=Msa0464700-mRNA-1:exon:14318;Parent=Msa0464700-mRNA-1 |
| chr3_3 | five_prime_UTR | 64844456 | 64844570 | 64844456 | ID=Msa0464700-mRNA-1:five_prime_utr;Parent=Msa0464700-mRNA-1 |
| chr3_3 | CDS | 64844571 | 64844756 | 64844571 | ID=Msa0464700-mRNA-1:cds;Parent=Msa0464700-mRNA-1 |
| chr3_3 | CDS | 64846766 | 64846857 | 64846766 | ID=Msa0464700-mRNA-1:cds;Parent=Msa0464700-mRNA-1 |
| chr3_3 | CDS | 64848181 | 64848256 | 64848181 | ID=Msa0464700-mRNA-1:cds;Parent=Msa0464700-mRNA-1 |
| chr3_3 | CDS | 64848362 | 64848484 | 64848362 | ID=Msa0464700-mRNA-1:cds;Parent=Msa0464700-mRNA-1 |
| chr3_3 | CDS | 64848859 | 64848951 | 64848859 | ID=Msa0464700-mRNA-1:cds;Parent=Msa0464700-mRNA-1 |
| chr3_3 | CDS | 64849112 | 64849241 | 64849112 | ID=Msa0464700-mRNA-1:cds;Parent=Msa0464700-mRNA-1 |
| chr3_3 | CDS | 64849339 | 64849420 | 64849339 | ID=Msa0464700-mRNA-1:cds;Parent=Msa0464700-mRNA-1 |
| chr3_3 | CDS | 64849513 | 64849645 | 64849513 | ID=Msa0464700-mRNA-1:cds;Parent=Msa0464700-mRNA-1 |
| chr3_3 | CDS | 64849791 | 64849996 | 64849791 | ID=Msa0464700-mRNA-1:cds;Parent=Msa0464700-mRNA-1 |
| chr3_3 | CDS | 64850094 | 64850219 | 64850094 | ID=Msa0464700-mRNA-1:cds;Parent=Msa0464700-mRNA-1 |
| chr3_3 | CDS | 64850768 | 64851077 | 64850768 | ID=Msa0464700-mRNA-1:cds;Parent=Msa0464700-mRNA-1 |
| chr3_3 | CDS | 64851202 | 64851507 | 64851202 | ID=Msa0464700-mRNA-1:cds;Parent=Msa0464700-mRNA-1 |
| chr3_3 | three_prime_UTR | 64851508 | 64851576 | 64851508 | ID=Msa0464700-mRNA-1:three_prime_utr;Parent=Msa0464700-mRNA-1 |
| chr3_3 | three_prime_UTR | 64851740 | 64851834 | 64851740 | ID=Msa0464700-mRNA-1:three_prime_utr;Parent=Msa0464700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
