Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510150 | XP_013460928.1 | 92.857 | 616 | 43 | 1 | 4 | 619 | 8 | 622 | 0.0 | 1214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510150 | sp|Q5MAU8|PPA27_ARATH | 73.650 | 611 | 155 | 3 | 9 | 619 | 6 | 610 | 0.0 | 951 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510150 | A0A072UZJ4 | 92.857 | 616 | 43 | 1 | 4 | 619 | 8 | 622 | 0.0 | 1214 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0464700 | Msa0510150 | 0.878751 | 2.179875e-69 | -8.615850e-47 |
| Msa0357960 | Msa0510150 | 0.918590 | 1.291079e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510150 | MtrunA17_Chr3g0116051 | 92.857 | 616 | 43 | 1 | 4 | 619 | 8 | 622 | 0.0 | 1214 |
| Msa0510150 | MtrunA17_Chr4g0057551 | 79.441 | 608 | 119 | 2 | 14 | 619 | 23 | 626 | 0.0 | 1041 |
| Msa0510150 | MtrunA17_Chr8g0364481 | 69.431 | 615 | 181 | 2 | 5 | 619 | 4 | 611 | 0.0 | 912 |
| Msa0510150 | MtrunA17_Chr5g0419621 | 70.559 | 608 | 174 | 2 | 14 | 619 | 14 | 618 | 0.0 | 910 |
| Msa0510150 | MtrunA17_Chr3g0116091 | 84.967 | 459 | 24 | 2 | 160 | 618 | 4 | 417 | 0.0 | 803 |
| Msa0510150 | MtrunA17_Chr3g0116071 | 75.862 | 319 | 8 | 2 | 156 | 474 | 4 | 253 | 5.67e-168 | 478 |
| Msa0510150 | MtrunA17_Chr4g0022251 | 34.797 | 615 | 327 | 20 | 38 | 600 | 42 | 634 | 4.60e-107 | 336 |
| Msa0510150 | MtrunA17_Chr1g0173511 | 37.204 | 465 | 256 | 14 | 132 | 574 | 34 | 484 | 3.30e-93 | 296 |
| Msa0510150 | MtrunA17_Chr3g0116081 | 97.778 | 135 | 3 | 0 | 486 | 620 | 1 | 135 | 6.61e-93 | 282 |
| Msa0510150 | MtrunA17_Chr4g0043001 | 28.454 | 608 | 352 | 23 | 42 | 598 | 5 | 580 | 1.93e-58 | 207 |
| Msa0510150 | MtrunA17_Chr4g0043021 | 28.289 | 608 | 356 | 22 | 40 | 598 | 4 | 580 | 2.02e-57 | 204 |
| Msa0510150 | MtrunA17_Chr7g0214261 | 96.970 | 66 | 2 | 0 | 196 | 261 | 6 | 71 | 1.11e-39 | 139 |
| Msa0510150 | MtrunA17_Chr1g0178831 | 27.229 | 415 | 228 | 15 | 189 | 593 | 57 | 407 | 6.50e-30 | 122 |
| Msa0510150 | MtrunA17_Chr7g0266131 | 25.908 | 413 | 228 | 15 | 189 | 589 | 65 | 411 | 2.77e-29 | 121 |
| Msa0510150 | MtrunA17_Chr7g0266151 | 25.791 | 411 | 232 | 13 | 189 | 589 | 58 | 405 | 8.44e-28 | 116 |
| Msa0510150 | MtrunA17_Chr4g0064541 | 25.974 | 462 | 278 | 16 | 160 | 602 | 35 | 451 | 2.38e-27 | 115 |
| Msa0510150 | MtrunA17_Chr3g0116061 | 84.746 | 59 | 8 | 1 | 4 | 62 | 8 | 65 | 2.70e-27 | 104 |
| Msa0510150 | MtrunA17_Chr3g0098721 | 26.218 | 431 | 246 | 14 | 189 | 613 | 54 | 418 | 2.06e-26 | 112 |
| Msa0510150 | MtrunA17_Chr6g0453731 | 26.812 | 414 | 187 | 15 | 246 | 589 | 146 | 513 | 4.38e-25 | 110 |
| Msa0510150 | MtrunA17_Chr5g0443881 | 24.390 | 451 | 263 | 18 | 173 | 613 | 42 | 424 | 1.06e-22 | 101 |
| Msa0510150 | MtrunA17_Chr7g0236041 | 25.352 | 426 | 202 | 13 | 246 | 600 | 146 | 526 | 2.09e-22 | 101 |
| Msa0510150 | MtrunA17_Chr3g0121411 | 24.186 | 430 | 202 | 14 | 246 | 600 | 147 | 527 | 5.52e-22 | 100 |
| Msa0510150 | MtrunA17_Chr3g0121431 | 23.944 | 426 | 208 | 14 | 246 | 600 | 202 | 582 | 5.81e-21 | 97.1 |
| Msa0510150 | MtrunA17_Chr1g0211041 | 24.122 | 427 | 242 | 19 | 190 | 590 | 70 | 440 | 1.51e-18 | 89.0 |
| Msa0510150 | MtrunA17_Chr4g0019091 | 24.793 | 363 | 218 | 15 | 246 | 590 | 113 | 438 | 2.27e-18 | 88.2 |
| Msa0510150 | MtrunA17_Chr4g0019071 | 25.962 | 312 | 184 | 13 | 301 | 595 | 39 | 320 | 1.27e-17 | 84.7 |
| Msa0510150 | MtrunA17_Chr6g0449981 | 96.552 | 29 | 1 | 0 | 232 | 260 | 1 | 29 | 6.70e-15 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510150 | AT5G50400.1 | 73.650 | 611 | 155 | 3 | 9 | 619 | 6 | 610 | 0.0 | 951 |
| Msa0510150 | AT4G24890.1 | 72.454 | 599 | 162 | 2 | 21 | 619 | 19 | 614 | 0.0 | 926 |
| Msa0510150 | AT1G13750.1 | 66.829 | 615 | 201 | 1 | 5 | 619 | 1 | 612 | 0.0 | 879 |
| Msa0510150 | AT5G50400.2 | 79.216 | 510 | 105 | 1 | 110 | 619 | 30 | 538 | 0.0 | 867 |
| Msa0510150 | AT1G13900.1 | 29.950 | 601 | 322 | 26 | 50 | 598 | 24 | 577 | 2.58e-59 | 210 |
| Msa0510150 | AT2G03450.1 | 28.969 | 611 | 331 | 25 | 43 | 598 | 15 | 577 | 4.24e-58 | 207 |
| Msa0510150 | AT3G52780.1 | 26.218 | 431 | 244 | 15 | 172 | 589 | 36 | 405 | 1.77e-28 | 119 |
| Msa0510150 | AT3G52810.1 | 26.450 | 431 | 243 | 17 | 169 | 589 | 42 | 408 | 1.04e-27 | 116 |
| Msa0510150 | AT3G52820.1 | 26.728 | 434 | 248 | 18 | 162 | 589 | 35 | 404 | 3.71e-24 | 106 |
| Msa0510150 | AT3G20500.1 | 30.466 | 279 | 163 | 10 | 320 | 589 | 147 | 403 | 6.00e-24 | 105 |
| Msa0510150 | AT4G13700.1 | 26.970 | 330 | 171 | 11 | 246 | 547 | 140 | 427 | 1.21e-23 | 104 |
| Msa0510150 | AT3G52780.2 | 27.507 | 349 | 198 | 12 | 172 | 513 | 36 | 336 | 1.33e-22 | 100 |
| Msa0510150 | AT2G27190.1 | 27.671 | 365 | 205 | 15 | 246 | 590 | 118 | 443 | 1.80e-22 | 101 |
| Msa0510150 | AT5G34850.1 | 25.203 | 369 | 234 | 12 | 246 | 602 | 112 | 450 | 1.96e-22 | 101 |
| Msa0510150 | AT4G36350.1 | 24.317 | 366 | 217 | 13 | 246 | 591 | 114 | 439 | 4.09e-20 | 94.4 |
| Msa0510150 | AT3G07130.1 | 24.466 | 421 | 209 | 15 | 246 | 600 | 140 | 517 | 2.55e-19 | 92.0 |
| Msa0510150 | AT1G56360.1 | 23.022 | 417 | 263 | 16 | 191 | 591 | 65 | 439 | 3.09e-19 | 91.7 |
| Msa0510150 | AT4G13700.2 | 26.804 | 291 | 153 | 10 | 246 | 508 | 140 | 398 | 1.03e-18 | 89.4 |
| Msa0510150 | AT2G18130.1 | 25.714 | 280 | 179 | 10 | 338 | 602 | 168 | 433 | 4.46e-15 | 78.6 |
| Msa0510150 | AT2G32770.3 | 22.170 | 424 | 201 | 16 | 246 | 589 | 149 | 523 | 6.95e-15 | 78.2 |
| Msa0510150 | AT3G07130.2 | 22.222 | 441 | 227 | 15 | 246 | 600 | 140 | 550 | 8.97e-15 | 78.2 |
| Msa0510150 | AT2G32770.2 | 22.359 | 407 | 187 | 16 | 246 | 572 | 68 | 425 | 7.09e-13 | 71.6 |
Find 174 sgRNAs with CRISPR-Local
Find 501 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGTTTCATTTACCTTTAT+TGG | 0.162930 | 3_4:+59004390 | None:intergenic |
| TATTTGGCCAAAGTTCTTTA+AGG | 0.186309 | 3_4:+59003243 | None:intergenic |
| TTTAATGCACACCTCATATT+TGG | 0.186772 | 3_4:+59003227 | None:intergenic |
| TAGTAGTAATACCTGATAAA+TGG | 0.213077 | 3_4:+59001446 | Msa0510140:intron |
| GAGTTTCATTTACCTTTATT+GGG | 0.220701 | 3_4:+59004391 | None:intergenic |
| CAGTCTTCATTAGTTGGTTC+TGG | 0.230728 | 3_4:+59007599 | None:intergenic |
| TAATATAACTCACCAGAATT+TGG | 0.238636 | 3_4:+59002428 | Msa0510140:intron |
| TGAATCTGCTTTCCACCCTT+TGG | 0.258361 | 3_4:+59003462 | None:intergenic |
| TGCAGGTATGCCACAGATTA+TGG | 0.265751 | 3_4:-59001750 | Msa0510150:intron |
| GAATCTGCTTTCCACCCTTT+GGG | 0.297542 | 3_4:+59003463 | None:intergenic |
| GCGAACCTTGCTATCATATA+TGG | 0.299475 | 3_4:+59002658 | None:intergenic |
| GGGAAAGTTTGCAGGGGCTT+TGG | 0.317516 | 3_4:-59001530 | Msa0510150:CDS |
| AGAGACAAAGACTATGGTTT+TGG | 0.320936 | 3_4:-59001182 | Msa0510150:CDS |
| CATGGGAAGGGAAAGTTTGC+AGG | 0.323081 | 3_4:-59001538 | Msa0510150:CDS |
| TTCTATGACACTCCAGATTC+AGG | 0.324023 | 3_4:-59002507 | Msa0510150:CDS |
| CGCGGATACACAGGTGCTTT+AGG | 0.325055 | 3_4:+59003736 | None:intergenic |
| CTGCACGTTGATTGATCAAT+TGG | 0.331585 | 3_4:+59004214 | None:intergenic |
| CCGCATTCTCCACCTGAATC+TGG | 0.338489 | 3_4:+59002495 | None:intergenic |
| TTGGGTGATATGAATGGATT+TGG | 0.345669 | 3_4:-59008720 | Msa0510150:CDS |
| AGTAGTAATACCTGATAAAT+GGG | 0.354416 | 3_4:+59001447 | Msa0510140:intron |
| AAGAGTATGCCCCATTTATC+AGG | 0.358857 | 3_4:-59001457 | Msa0510150:intron |
| AGTCTTCATTAGTTGGTTCT+GGG | 0.359076 | 3_4:+59007600 | None:intergenic |
| TTGCAACGTGTTATCATATT+CGG | 0.359394 | 3_4:-59003027 | Msa0510150:CDS |
| CACCAACTTGAGGATCTGTT+TGG | 0.360863 | 3_4:-59008739 | Msa0510150:CDS |
| CGTCCAATGCCACCGGGGTT+GGG | 0.366293 | 3_4:+59004441 | None:intergenic |
| ACCGTTGGCTGGCGCGATCC+TGG | 0.370934 | 3_4:-59003284 | Msa0510150:CDS |
| GGCATACTCTTTCGTAGTTA+TGG | 0.374674 | 3_4:+59001469 | Msa0510140:intron |
| ACGATTAAATGTCAATGTTC+CGG | 0.375358 | 3_4:+59003431 | None:intergenic |
| CTGCAAACTTTCCCTTCCCA+TGG | 0.377219 | 3_4:+59001539 | Msa0510140:intron |
| CATTATTCTGGCACTGTGAA+TGG | 0.377604 | 3_4:-59001284 | Msa0510150:CDS |
| TCACCACAGCACCTCCTGTT+TGG | 0.380045 | 3_4:-59001214 | Msa0510150:CDS |
| AGCTGTACCATTTGTTGAAT+GGG | 0.384608 | 3_4:-59003487 | Msa0510150:CDS |
| GTATGTTACTTGAAGTTTGC+AGG | 0.390132 | 3_4:+59007560 | None:intergenic |
| TCTTCCCCAGGTACACCTAT+AGG | 0.390256 | 3_4:-59003134 | Msa0510150:intron |
| AGAATGGGTGACAGTAAAAC+TGG | 0.392816 | 3_4:-59007627 | Msa0510150:CDS |
| CCGTCCAATGCCACCGGGGT+TGG | 0.396303 | 3_4:+59004440 | None:intergenic |
| AGGTAAGTTAAACATGAGTT+TGG | 0.397660 | 3_4:-59008781 | Msa0510150:CDS |
| CTGAGAACAAAGCCAAATTC+TGG | 0.397715 | 3_4:-59002440 | Msa0510150:intron |
| CATGTTGTTGTTGGTGGAGG+GGG | 0.399824 | 3_4:-59001254 | Msa0510150:CDS |
| TGTCTGATGGCTCTTATGTA+TGG | 0.401100 | 3_4:-59003098 | Msa0510150:CDS |
| CATATGCTCAGCCCCAATAA+AGG | 0.402084 | 3_4:-59004403 | Msa0510150:intron |
| TCATAGAAGGATCCTGAGTT+TGG | 0.403373 | 3_4:+59002522 | None:intergenic |
| CCCAGGTACACCTATAGGTT+GGG | 0.403700 | 3_4:-59003129 | Msa0510150:intron |
| CAGGTTTCCTTAAAGAACTT+TGG | 0.414188 | 3_4:-59003250 | Msa0510150:CDS |
| CCAACCCAGTCTTCATTAGT+TGG | 0.419485 | 3_4:+59007593 | None:intergenic |
| AAGAACTTTGGCCAAATATG+AGG | 0.419579 | 3_4:-59003238 | Msa0510150:intron |
| CAATAAATGCCCCAACCTAT+AGG | 0.420530 | 3_4:+59003119 | None:intergenic |
| CTACTTAAAGAGGCTCTTGA+TGG | 0.426117 | 3_4:+59008875 | None:intergenic |
| ATCTCTATAGTCCCTGGAAA+TGG | 0.436173 | 3_4:+59001079 | Msa0510140:intron |
| TTCAAGGCATCTCCTTATCC+TGG | 0.438321 | 3_4:-59003060 | Msa0510150:CDS |
| AATTTGGCTTTGTTCTCAGC+AGG | 0.439009 | 3_4:+59002444 | Msa0510140:intron |
| CTTGGCATACCAATCATTAG+AGG | 0.440011 | 3_4:+59001581 | Msa0510140:intron |
| CCACCCAACCCCGGTGGCAT+TGG | 0.440027 | 3_4:-59004444 | Msa0510150:CDS |
| AACCTGCGCGAACCGTTGGC+TGG | 0.449374 | 3_4:-59003295 | Msa0510150:CDS |
| TGAATCTGGAGTGTCATAGA+AGG | 0.450964 | 3_4:+59002509 | None:intergenic |
| CTCTTCAAATGAACCCTCCT+TGG | 0.453099 | 3_4:+59001563 | Msa0510140:intron |
| TTTGGGCCCCATTCAACAAA+TGG | 0.461006 | 3_4:+59003480 | None:intergenic |
| ACCAACTTGAGGATCTGTTT+GGG | 0.461280 | 3_4:-59008738 | Msa0510150:CDS |
| GGAACAATTCATGTTGTTGT+TGG | 0.462326 | 3_4:-59001263 | Msa0510150:CDS |
| GTGGAAATCACGAACGCTCT+TGG | 0.464456 | 3_4:-59002545 | Msa0510150:CDS |
| CTCAGCAGGGTAATAGTACA+TGG | 0.467918 | 3_4:+59002458 | Msa0510140:intron |
| ATCTGTTTGGGTGATATGAA+TGG | 0.471658 | 3_4:-59008726 | Msa0510150:CDS |
| ATTCATGTTGTTGTTGGTGG+AGG | 0.474320 | 3_4:-59001257 | Msa0510150:CDS |
| TTGGGGCATTTATTGTCTGA+TGG | 0.475270 | 3_4:-59003111 | Msa0510150:CDS |
| TCTCTGAAAATACTCCAAAC+AGG | 0.481381 | 3_4:+59001200 | Msa0510140:intron |
| CCCCAGGTACACCTATAGGT+TGG | 0.482030 | 3_4:-59003130 | Msa0510150:intron |
| CAGGGACTATAGAGATGTCT+TGG | 0.482107 | 3_4:-59001072 | Msa0510150:CDS |
| GTATTTAGGATTGGAGTGGT+TGG | 0.482977 | 3_4:+59004266 | None:intergenic |
| GTGTATCCGCGCCTTGCTCA+TGG | 0.485506 | 3_4:-59003724 | Msa0510150:CDS |
| AAGCTGTACCATTTGTTGAA+TGG | 0.486572 | 3_4:-59003488 | Msa0510150:CDS |
| TTCATGTTGTTGTTGGTGGA+GGG | 0.486891 | 3_4:-59001256 | Msa0510150:CDS |
| TTTGAAACTGCAACAAGCTT+AGG | 0.488913 | 3_4:+59003778 | None:intergenic |
| TCGGTTACTCCTCTAATGAT+TGG | 0.490311 | 3_4:-59001590 | Msa0510150:CDS |
| TGTCTAAATCCTTGATGAGC+TGG | 0.492936 | 3_4:+59002785 | None:intergenic |
| ATCTACCCGTCCAATGCCAC+CGG | 0.493173 | 3_4:+59004434 | None:intergenic |
| GCTCTTATGTATGGAGTAAG+AGG | 0.494084 | 3_4:-59003089 | Msa0510150:CDS |
| ACAATTCATGTTGTTGTTGG+TGG | 0.495571 | 3_4:-59001260 | Msa0510150:CDS |
| CAGAACCAACTAATGAAGAC+TGG | 0.498767 | 3_4:-59007598 | Msa0510150:CDS |
| CGCCAGCCAACGGTTCGCGC+AGG | 0.499949 | 3_4:+59003293 | None:intergenic |
| TGCAAACTTTCCCTTCCCAT+GGG | 0.500947 | 3_4:+59001540 | Msa0510140:intron |
| ATTGGGGCTGAGCATATGAA+TGG | 0.502132 | 3_4:+59004408 | None:intergenic |
| AGAATCATGGATCGCAAGAA+TGG | 0.504874 | 3_4:+59008662 | None:intergenic |
| GGAGATCTGCCATATGCAAA+TGG | 0.505321 | 3_4:-59002739 | Msa0510150:CDS |
| TTTGTTGAATGGGGCCCAAA+GGG | 0.507205 | 3_4:-59003477 | Msa0510150:CDS |
| ACTTCATCCTCTACTTAAAG+AGG | 0.510900 | 3_4:+59008865 | None:intergenic |
| AGTTTCATTTACCTTTATTG+GGG | 0.515764 | 3_4:+59004392 | None:intergenic |
| CCAACCCCGGTGGCATTGGA+CGG | 0.516793 | 3_4:-59004440 | Msa0510150:CDS |
| CAGTAATGGAGGCAGAATCA+TGG | 0.518657 | 3_4:+59008649 | None:intergenic |
| GAGTAAGAGGTATTCATTCA+AGG | 0.520098 | 3_4:-59003076 | Msa0510150:CDS |
| GGTCAACCTGCGCGAACCGT+TGG | 0.521129 | 3_4:-59003299 | Msa0510150:CDS |
| GTCTTCATTAGTTGGTTCTG+GGG | 0.525235 | 3_4:+59007601 | None:intergenic |
| TCATTTAAACAATGGATGGA+AGG | 0.529130 | 3_4:-59008801 | Msa0510150:exon |
| CAACCCCGGTGGCATTGGAC+GGG | 0.532592 | 3_4:-59004439 | Msa0510150:CDS |
| TGAGCAAGGCGCGGATACAC+AGG | 0.538957 | 3_4:+59003727 | None:intergenic |
| GAACGCTCTTGGCCAAACTC+AGG | 0.539098 | 3_4:-59002534 | Msa0510150:CDS |
| TAATAGTACATGGTTTCTGC+AGG | 0.541874 | 3_4:+59002468 | Msa0510140:three_prime_UTR |
| CAAGAAAAGTAGTGATGGAA+AGG | 0.542299 | 3_4:-59001117 | Msa0510150:CDS |
| GTCCTTTAGGCTGAGCGTGA+TGG | 0.547365 | 3_4:-59002856 | Msa0510150:intron |
| TCCAAGACTTTCCATGAGCA+AGG | 0.549311 | 3_4:+59003713 | None:intergenic |
| TCATGTTGTTGTTGGTGGAG+GGG | 0.552640 | 3_4:-59001255 | Msa0510150:CDS |
| TATGACAGATGACAGTTACC+TGG | 0.552868 | 3_4:-59003533 | Msa0510150:intron |
| TGTTATCATATTCGGTGACA+TGG | 0.552892 | 3_4:-59003019 | Msa0510150:CDS |
| CCAATGCCACCGGGGTTGGG+TGG | 0.553233 | 3_4:+59004444 | None:intergenic |
| GGGTTCATTTGAAGAGCCCA+TGG | 0.554005 | 3_4:-59001556 | Msa0510150:CDS |
| CTCTAATGATTGGTATGCCA+AGG | 0.554950 | 3_4:-59001580 | Msa0510150:CDS |
| TCTACCCGTCCAATGCCACC+GGG | 0.555257 | 3_4:+59004435 | None:intergenic |
| ATTTGTTGAATGGGGCCCAA+AGG | 0.559998 | 3_4:-59003478 | Msa0510150:CDS |
| TAGCAGACACTGAACATGAC+TGG | 0.560714 | 3_4:-59001710 | Msa0510150:CDS |
| GCAGGGCGAGGATACAGAAT+GGG | 0.561327 | 3_4:-59007642 | Msa0510150:intron |
| TATGTCATATCCACTTGTCC+AGG | 0.562397 | 3_4:+59003515 | None:intergenic |
| GCCTCTTCATCACCAACTTG+AGG | 0.562952 | 3_4:-59008749 | Msa0510150:CDS |
| TCCTCAAGTTGGTGATGAAG+AGG | 0.564410 | 3_4:+59008748 | None:intergenic |
| ATTTGAAGAGCCCATGGGAA+GGG | 0.565074 | 3_4:-59001550 | Msa0510150:CDS |
| CTTAAAGAGGCTCTTGATGG+AGG | 0.565221 | 3_4:+59008878 | None:intergenic |
| GAGATGTATCCATTTGCATA+TGG | 0.566529 | 3_4:+59002730 | None:intergenic |
| CAAGACATCTCTATAGTCCC+TGG | 0.567071 | 3_4:+59001073 | Msa0510140:intron |
| GAATATGCTAATTATCAACC+TGG | 0.571971 | 3_4:-59002826 | Msa0510150:CDS |
| CCAGGTACACCTATAGGTTG+GGG | 0.578851 | 3_4:-59003128 | Msa0510150:intron |
| ACTGAACATGACTGGAGAGA+AGG | 0.580541 | 3_4:-59001702 | Msa0510150:CDS |
| CACCACTGACCAGCTCATCA+AGG | 0.584625 | 3_4:-59002794 | Msa0510150:CDS |
| ACCAGGATCGCGCCAGCCAA+CGG | 0.585321 | 3_4:+59003283 | None:intergenic |
| GAGTACAAGAAAAGTAGTGA+TGG | 0.585752 | 3_4:-59001122 | Msa0510150:CDS |
| TGCAGGGCGAGGATACAGAA+TGG | 0.587032 | 3_4:-59007643 | Msa0510150:intron |
| CATATTCGGTGACATGGGAA+AGG | 0.587852 | 3_4:-59003013 | Msa0510150:intron |
| ATGACAGTTACCTGGACAAG+TGG | 0.589057 | 3_4:-59003525 | Msa0510150:CDS |
| ACCCAAACAGATCCTCAAGT+TGG | 0.593043 | 3_4:+59008737 | None:intergenic |
| CAGTTCCATATATGATAGCA+AGG | 0.595584 | 3_4:-59002663 | Msa0510150:intron |
| ATGGGAAGGGAAAGTTTGCA+GGG | 0.596275 | 3_4:-59001537 | Msa0510150:CDS |
| TCAAGAGCCTCTTTAAGTAG+AGG | 0.597131 | 3_4:-59008872 | Msa0510150:five_prime_UTR |
| CCAACTAATGAAGACTGGGT+TGG | 0.597652 | 3_4:-59007593 | Msa0510150:CDS |
| AAGCAGATTCAATCTGCTGC+CGG | 0.597918 | 3_4:-59003450 | Msa0510150:CDS |
| TTAAAGAGGCTCTTGATGGA+GGG | 0.598847 | 3_4:+59008879 | None:intergenic |
| TCCACCTGAAAATAGTGCAA+AGG | 0.604263 | 3_4:+59004185 | None:intergenic |
| GTTGAATGGGGCCCAAAGGG+TGG | 0.605971 | 3_4:-59003474 | Msa0510150:CDS |
| TTTGCAGCACATCGCCCACT+CGG | 0.606514 | 3_4:-59001609 | Msa0510150:CDS |
| TGAATGGCAATCTTTGAAAG+TGG | 0.607314 | 3_4:+59008690 | None:intergenic |
| CATTTGAAGAGCCCATGGGA+AGG | 0.608262 | 3_4:-59001551 | Msa0510150:CDS |
| CATATGGCAGATCTCCTATG+TGG | 0.608314 | 3_4:+59002746 | None:intergenic |
| GCCTTGCTCATGGAAAGTCT+TGG | 0.610045 | 3_4:-59003714 | Msa0510150:CDS |
| AAACCTGTGTGTATAAAACC+AGG | 0.612380 | 3_4:+59003266 | None:intergenic |
| GTTATCATATTCGGTGACAT+GGG | 0.619175 | 3_4:-59003018 | Msa0510150:CDS |
| ACATGACTGGAGAGAAGGAT+CGG | 0.620114 | 3_4:-59001697 | Msa0510150:CDS |
| CCAGATTCAGGTGGAGAATG+CGG | 0.625344 | 3_4:-59002495 | Msa0510150:CDS |
| AATGATTGGTATGCCAAGGA+GGG | 0.625443 | 3_4:-59001576 | Msa0510150:CDS |
| ATTTGGCTTTGTTCTCAGCA+GGG | 0.626371 | 3_4:+59002445 | Msa0510140:intron |
| CTCACAACCATCGTGCACAC+AGG | 0.626678 | 3_4:+59001049 | Msa0510140:intron |
| ACTCCAAACAGGAGGTGCTG+TGG | 0.627083 | 3_4:+59001211 | Msa0510140:intron |
| TAATGATTGGTATGCCAAGG+AGG | 0.627561 | 3_4:-59001577 | Msa0510150:CDS |
| AGAACCAACTAATGAAGACT+GGG | 0.631293 | 3_4:-59007597 | Msa0510150:CDS |
| ATCCTTGATGAGCTGGTCAG+TGG | 0.633150 | 3_4:+59002792 | None:intergenic |
| GGTTCATTTGAAGAGCCCAT+GGG | 0.633987 | 3_4:-59001555 | Msa0510150:CDS |
| GACTTTCCATGAGCAAGGCG+CGG | 0.635264 | 3_4:+59003718 | None:intergenic |
| TCAGTGGTGTTAAGTGAACC+AGG | 0.637131 | 3_4:+59002808 | None:intergenic |
| TTTAATCGTAACAGCATGTG+TGG | 0.639129 | 3_4:-59003417 | Msa0510150:intron |
| TATGACACTCCAGATTCAGG+TGG | 0.641435 | 3_4:-59002504 | Msa0510150:CDS |
| CATAATTCAGAGTGCCAAGG+TGG | 0.647479 | 3_4:+59001022 | Msa0510140:intron |
| GCTGTACCATTTGTTGAATG+GGG | 0.649227 | 3_4:-59003486 | Msa0510150:CDS |
| ACGAAACATGCCATAATCTG+TGG | 0.650821 | 3_4:+59001740 | Msa0510140:intron |
| TAGATAGAAAACAACAACCA+TGG | 0.654457 | 3_4:-59001638 | Msa0510150:CDS |
| AAATGGATACATCTCACAGT+GGG | 0.656289 | 3_4:-59002722 | Msa0510150:CDS |
| CTACATAATTCAGAGTGCCA+AGG | 0.658085 | 3_4:+59001019 | Msa0510140:intron |
| TCAACATGTCCACCCAACCC+CGG | 0.658162 | 3_4:-59004453 | Msa0510150:CDS |
| GTCTTGGCCTGTGTGCACGA+TGG | 0.663436 | 3_4:-59001056 | Msa0510150:CDS |
| GTAGTAATACCTGATAAATG+GGG | 0.666875 | 3_4:+59001448 | Msa0510140:intron |
| AAACGGGGAAGCAGTAATGG+AGG | 0.672893 | 3_4:+59008638 | None:intergenic |
| CATTAGAGGAGTAACCGAGT+GGG | 0.692825 | 3_4:+59001595 | Msa0510140:intron |
| CTGAAAATACTCCAAACAGG+AGG | 0.700173 | 3_4:+59001203 | Msa0510140:intron |
| TGGGAAGGGAAAGTTTGCAG+GGG | 0.702638 | 3_4:-59001536 | Msa0510150:CDS |
| TCATTAGAGGAGTAACCGAG+TGG | 0.714971 | 3_4:+59001594 | Msa0510140:intron |
| TGGTTGTGAGAAAACCACCT+TGG | 0.719747 | 3_4:-59001036 | Msa0510150:CDS |
| CTACCCGTCCAATGCCACCG+GGG | 0.725369 | 3_4:+59004436 | None:intergenic |
| ACATGTCCACCCAACCCCGG+TGG | 0.726524 | 3_4:-59004450 | Msa0510150:CDS |
| CAAATGGATACATCTCACAG+TGG | 0.732996 | 3_4:-59002723 | Msa0510150:CDS |
| TGTGCTGCAAAGATTAACCA+TGG | 0.735965 | 3_4:+59001621 | Msa0510140:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTTCATTTAAACAA+TGG | - | chr3_4:59000868-59000887 | Msa0510150:intron | 10.0% |
| !!! | TTGATATAAATTTTTTTTTG+TGG | - | chr3_4:59001398-59001417 | Msa0510150:intron | 10.0% |
| !!! | TAATGAATTTTATTTTTTTG+AGG | - | chr3_4:59001533-59001552 | Msa0510150:CDS | 10.0% |
| !!! | AATGAATTTTATTTTTTTGA+GGG | - | chr3_4:59001534-59001553 | Msa0510150:CDS | 10.0% |
| !! | CATTAAATAATTTATGTATT+TGG | - | chr3_4:59001623-59001642 | Msa0510150:CDS | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr3_4:59002312-59002331 | Msa0510150:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr3_4:59002313-59002332 | Msa0510150:intron | 10.0% |
| !! | TAAATGTAAAATTACATAAA+AGG | - | chr3_4:59002616-59002635 | Msa0510150:intron | 10.0% |
| !!! | TTTTATTAATGTATAATAAC+TGG | + | chr3_4:59002793-59002812 | None:intergenic | 10.0% |
| !!! | AATATAATTTAAGTTATGTT+GGG | - | chr3_4:59004421-59004440 | Msa0510150:CDS | 10.0% |
| !!! | AAATTTTGAACTTATTTTTT+GGG | - | chr3_4:59004577-59004596 | Msa0510150:intron | 10.0% |
| !!! | ATATAACAAAATATTTTGAA+AGG | - | chr3_4:59004804-59004823 | Msa0510150:intron | 10.0% |
| !!! | TATAACAAAATATTTTGAAA+GGG | - | chr3_4:59004805-59004824 | Msa0510150:intron | 10.0% |
| !! | AATTTAAAAAATTGTATTGA+AGG | - | chr3_4:59004911-59004930 | Msa0510150:intron | 10.0% |
| !!! | ATTTTTAGAAAAAGATAATA+AGG | + | chr3_4:59006318-59006337 | None:intergenic | 10.0% |
| !! | TTATTTAATGTTTATAACAT+TGG | - | chr3_4:59006696-59006715 | Msa0510150:intron | 10.0% |
| !! | AATAGGTTAAATTAATGAAA+CGG | + | chr3_4:59001095-59001114 | Msa0510140:intron | 15.0% |
| !! | AATTAAGTGAAATGTTAAAT+TGG | - | chr3_4:59001195-59001214 | Msa0510150:CDS | 15.0% |
| !!! | ATGAATTTTATTTTTTTGAG+GGG | - | chr3_4:59001535-59001554 | Msa0510150:CDS | 15.0% |
| !! | ATCATATCATACATATATTA+AGG | - | chr3_4:59002197-59002216 | Msa0510150:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr3_4:59002314-59002333 | Msa0510150:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr3_4:59002377-59002396 | Msa0510150:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr3_4:59002378-59002397 | Msa0510150:intron | 15.0% |
| !!! | ACACTTTTTTTTTAGAAAAT+GGG | - | chr3_4:59002448-59002467 | Msa0510150:CDS | 15.0% |
| !! | CAAAAAAAAATACGTATAAA+TGG | - | chr3_4:59002906-59002925 | Msa0510150:intron | 15.0% |
| !!! | GGTTTTAATTAAAATGATAA+GGG | + | chr3_4:59003474-59003493 | None:intergenic | 15.0% |
| !!! | CAAGTGTTTTAATATATAAA+GGG | + | chr3_4:59003505-59003524 | None:intergenic | 15.0% |
| !!! | ACAAGTGTTTTAATATATAA+AGG | + | chr3_4:59003506-59003525 | None:intergenic | 15.0% |
| !! | TTAAAGTATAATAACTGAAA+TGG | - | chr3_4:59003677-59003696 | Msa0510150:intron | 15.0% |
| !! | TAAATGTAAAATGACATAAA+AGG | + | chr3_4:59003800-59003819 | None:intergenic | 15.0% |
| !!! | CAATATAATTTAAGTTATGT+TGG | - | chr3_4:59004420-59004439 | Msa0510150:CDS | 15.0% |
| !! | CAAAAAATAAGTTCAAAATT+TGG | + | chr3_4:59004578-59004597 | None:intergenic | 15.0% |
| !!! | CAAATTTTGAACTTATTTTT+TGG | - | chr3_4:59004576-59004595 | Msa0510150:intron | 15.0% |
| !!! | ATAACAAAATATTTTGAAAG+GGG | - | chr3_4:59004806-59004825 | Msa0510150:intron | 15.0% |
| !!! | TATTTCTATAATTTCATTGT+TGG | - | chr3_4:59007390-59007409 | Msa0510150:intron | 15.0% |
| !!! | TTTTTCATTTAAACAATGGA+TGG | - | chr3_4:59000872-59000891 | Msa0510150:intron | 20.0% |
| !! | ATAGGTTAAATTAATGAAAC+GGG | + | chr3_4:59001094-59001113 | Msa0510140:intron | 20.0% |
| !!! | AATGAATTACTTGACTATTT+TGG | + | chr3_4:59001237-59001256 | Msa0510140:intron | 20.0% |
| !! | AGTAAGTTTGCATTAAAAAA+TGG | + | chr3_4:59001317-59001336 | Msa0510140:intron | 20.0% |
| !!! | AACATTTGTTGATAAATCTA+TGG | + | chr3_4:59001473-59001492 | Msa0510140:intron | 20.0% |
| !!! | TGAATTTTATTTTTTTGAGG+GGG | - | chr3_4:59001536-59001555 | Msa0510150:CDS | 20.0% |
| !!! | TTTTTGTTTTGTTTTGTTGA+GGG | + | chr3_4:59001741-59001760 | Msa0510140:intron | 20.0% |
| !!! | TTTTTTGTTTTGTTTTGTTG+AGG | + | chr3_4:59001742-59001761 | Msa0510140:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr3_4:59002337-59002356 | Msa0510150:intron | 20.0% |
| !!! | GACACTTTTTTTTTAGAAAA+TGG | - | chr3_4:59002447-59002466 | Msa0510150:CDS | 20.0% |
| !!! | AAAGTGTTTGATAAAAATAG+CGG | - | chr3_4:59002580-59002599 | Msa0510150:intron | 20.0% |
| !!! | AAATTTGTTAAAAAGAACGA+AGG | - | chr3_4:59002877-59002896 | Msa0510150:intron | 20.0% |
| !! | TAAAATGATAAGGGTAAAAA+TGG | + | chr3_4:59003465-59003484 | None:intergenic | 20.0% |
| !!! | GGGTTTTAATTAAAATGATA+AGG | + | chr3_4:59003475-59003494 | None:intergenic | 20.0% |
| !! | AAAACAAACCATTATCTATA+TGG | + | chr3_4:59003597-59003616 | None:intergenic | 20.0% |
| !! | GATAAGCTAATTAAAATGTT+TGG | + | chr3_4:59003848-59003867 | None:intergenic | 20.0% |
| !!! | TTAGTCACATTTTTTTTTGA+AGG | - | chr3_4:59004228-59004247 | Msa0510150:CDS | 20.0% |
| !! | AAAAAAAATGAAGAATGAAG+TGG | - | chr3_4:59004781-59004800 | Msa0510150:intron | 20.0% |
| !!! | TAACAAAATATTTTGAAAGG+GGG | - | chr3_4:59004807-59004826 | Msa0510150:intron | 20.0% |
| !! | AATTCTAAATTAGAATCTGT+CGG | + | chr3_4:59004895-59004914 | None:intergenic | 20.0% |
| !! | TAATAGCACTAGTATATAAA+GGG | + | chr3_4:59005818-59005837 | None:intergenic | 20.0% |
| !! | ATGTATAATTAGGAAATGTT+AGG | + | chr3_4:59006032-59006051 | None:intergenic | 20.0% |
| !! | AACATTTCCTAATTATACAT+TGG | - | chr3_4:59006032-59006051 | Msa0510150:intron | 20.0% |
| !! | ATAAGAACCAATGTATAATT+AGG | + | chr3_4:59006042-59006061 | None:intergenic | 20.0% |
| !!! | AGAGTTTTTAGATAAAAAGT+TGG | + | chr3_4:59006751-59006770 | None:intergenic | 20.0% |
| !! | AAACTCAATTCAAATTTCTA+TGG | + | chr3_4:59007065-59007084 | None:intergenic | 20.0% |
| !! | AAAGAAAAATCTCATTATTC+TGG | - | chr3_4:59008381-59008400 | Msa0510150:intron | 20.0% |
| !! | AATAACAGTTATTATGTGTT+AGG | - | chr3_4:59008734-59008753 | Msa0510150:CDS | 20.0% |
| !!! | GAAAACTTTTGTTTTCACAA+AGG | - | chr3_4:59000838-59000857 | Msa0510150:intron | 25.0% |
| ! | TAGGTTAAATTAATGAAACG+GGG | + | chr3_4:59001093-59001112 | Msa0510140:intron | 25.0% |
| ! | CTAGTGAGAACAAAATAAAT+AGG | + | chr3_4:59001112-59001131 | Msa0510140:intron | 25.0% |
| ! | TCATTCATTGCTAATAAAAG+TGG | + | chr3_4:59001159-59001178 | Msa0510140:intron | 25.0% |
| !! | TTGTTGATAAATCTATGGTA+AGG | + | chr3_4:59001468-59001487 | Msa0510140:intron | 25.0% |
| !!! | GAATTTTATTTTTTTGAGGG+GGG | - | chr3_4:59001537-59001556 | Msa0510150:CDS | 25.0% |
| ! | ACAAAAAATAGTACTTGATC+AGG | - | chr3_4:59001754-59001773 | Msa0510150:intron | 25.0% |
| ! | TAAGATACAAAATTGTTTGC+AGG | - | chr3_4:59001947-59001966 | Msa0510150:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr3_4:59002336-59002355 | Msa0510150:intron | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | - | chr3_4:59002424-59002443 | Msa0510150:intron | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | - | chr3_4:59002425-59002444 | Msa0510150:intron | 25.0% |
| ! | AAATACGTATAAATGGAGAT+AGG | - | chr3_4:59002913-59002932 | Msa0510150:intron | 25.0% |
| ! | TCAATTATTAAGGGTAAACA+TGG | - | chr3_4:59003093-59003112 | Msa0510150:CDS | 25.0% |
| ! | CAATTATTAAGGGTAAACAT+GGG | - | chr3_4:59003094-59003113 | Msa0510150:CDS | 25.0% |
| !!! | AAAGCTAAAAAGCTCTTTTT+TGG | - | chr3_4:59003306-59003325 | Msa0510150:intron | 25.0% |
| ! | AATATATAAAGGGTAAACGT+GGG | + | chr3_4:59003495-59003514 | None:intergenic | 25.0% |
| ! | TAATATATAAAGGGTAAACG+TGG | + | chr3_4:59003496-59003515 | None:intergenic | 25.0% |
| !!! | GTTTTGTTCCATATAGATAA+TGG | - | chr3_4:59003586-59003605 | Msa0510150:intron | 25.0% |
| !! | GAAAAAAGTACATTGACAAT+AGG | - | chr3_4:59004054-59004073 | Msa0510150:intron | 25.0% |
| !! | TTCTCTCTCTGTTTTATAAT+TGG | - | chr3_4:59004101-59004120 | Msa0510150:intron | 25.0% |
| !!! | CATTTTTTTTTGAAGGAAGA+AGG | - | chr3_4:59004235-59004254 | Msa0510150:CDS | 25.0% |
| !!! | TGTATTTTGGAAAGTTTGAT+TGG | - | chr3_4:59004476-59004495 | Msa0510150:intron | 25.0% |
| !!! | GTATTTTGGAAAGTTTGATT+GGG | - | chr3_4:59004477-59004496 | Msa0510150:intron | 25.0% |
| ! | ACATAAAGTTTACTAGACAT+AGG | + | chr3_4:59004653-59004672 | None:intergenic | 25.0% |
| ! | CATTGGATAAATTGGATTTA+AGG | + | chr3_4:59004682-59004701 | None:intergenic | 25.0% |
| !!! | TAGGAGTTTATTTTTCTTCA+TGG | - | chr3_4:59004836-59004855 | Msa0510150:intron | 25.0% |
| !! | ATTGTATTGAAGGATGATTT+TGG | - | chr3_4:59004921-59004940 | Msa0510150:intron | 25.0% |
| ! | TGAGATATATGCATAGTTTA+TGG | + | chr3_4:59005150-59005169 | None:intergenic | 25.0% |
| ! | ATGCATATATCTCACTATTA+TGG | - | chr3_4:59005156-59005175 | Msa0510150:intron | 25.0% |
| ! | AGTTTCATTTACCTTTATTG+GGG | + | chr3_4:59005288-59005307 | None:intergenic | 25.0% |
| ! | GAGTTTCATTTACCTTTATT+GGG | + | chr3_4:59005289-59005308 | None:intergenic | 25.0% |
| ! | CATACACAATTTATATGAGA+TGG | + | chr3_4:59005311-59005330 | None:intergenic | 25.0% |
| ! | AATGAATGAACAACATAACA+AGG | - | chr3_4:59005332-59005351 | Msa0510150:intron | 25.0% |
| !!! | AGTCTTTTTGTATTTAGGAT+TGG | + | chr3_4:59005423-59005442 | None:intergenic | 25.0% |
| ! | AATCCTAAATACAAAAAGAC+TGG | - | chr3_4:59005422-59005441 | Msa0510150:intron | 25.0% |
| ! | ATCCTAAATACAAAAAGACT+GGG | - | chr3_4:59005423-59005442 | Msa0510150:intron | 25.0% |
| ! | AATAGCACTAGTATATAAAG+GGG | + | chr3_4:59005817-59005836 | None:intergenic | 25.0% |
| ! | CTAATAGCACTAGTATATAA+AGG | + | chr3_4:59005819-59005838 | None:intergenic | 25.0% |
| ! | TGTTAGCATACAATTGAATA+AGG | + | chr3_4:59005853-59005872 | None:intergenic | 25.0% |
| ! | ATGATTCTCAACATATAATG+AGG | - | chr3_4:59006336-59006355 | Msa0510150:intron | 25.0% |
| ! | TGATTCTCAACATATAATGA+GGG | - | chr3_4:59006337-59006356 | Msa0510150:intron | 25.0% |
| ! | AGTTGGAAAATTATCTAGTT+AGG | + | chr3_4:59006734-59006753 | None:intergenic | 25.0% |
| !!! | TTTGATCTTGATTTGTACAA+TGG | - | chr3_4:59006773-59006792 | Msa0510150:intron | 25.0% |
| !!! | TTGATCTTGATTTGTACAAT+GGG | - | chr3_4:59006774-59006793 | Msa0510150:intron | 25.0% |
| !! | ACATATTCTTTTAGACTGAA+AGG | - | chr3_4:59007086-59007105 | Msa0510150:intron | 25.0% |
| ! | TAATATAACTCACCAGAATT+TGG | + | chr3_4:59007252-59007271 | None:intergenic | 25.0% |
| ! | TATTAATGCTAAACATGTCA+TGG | + | chr3_4:59007288-59007307 | None:intergenic | 25.0% |
| ! | ACAACATAGAAGCTATTTAT+AGG | - | chr3_4:59007632-59007651 | Msa0510150:CDS | 25.0% |
| !! | ATTTTCATCCTTATAGTTCA+TGG | - | chr3_4:59007813-59007832 | Msa0510150:intron | 25.0% |
| ! | TTGCAAGTGAAAAATAAACT+AGG | - | chr3_4:59007859-59007878 | Msa0510150:intron | 25.0% |
| !! | TTTTCGTCATTAATTAGGAA+TGG | + | chr3_4:59007898-59007917 | None:intergenic | 25.0% |
| ! | TCCTAATTAATGACGAAAAT+TGG | - | chr3_4:59007899-59007918 | Msa0510150:intron | 25.0% |
| !! | TCCAATTTTCGTCATTAATT+AGG | + | chr3_4:59007903-59007922 | None:intergenic | 25.0% |
| !! | AAAGTAGACATTGCATTTTA+TGG | - | chr3_4:59008179-59008198 | Msa0510150:intron | 25.0% |
| ! | AGTAGTAATACCTGATAAAT+GGG | + | chr3_4:59008233-59008252 | None:intergenic | 25.0% |
| ! | TAGTAGTAATACCTGATAAA+TGG | + | chr3_4:59008234-59008253 | None:intergenic | 25.0% |
| ! | CACATTTGGATAATTAGAAA+TGG | + | chr3_4:59008336-59008355 | None:intergenic | 25.0% |
| !! | ATTTTTCTTTATTCACGCAT+TGG | + | chr3_4:59008371-59008390 | None:intergenic | 25.0% |
| ! | GCCTCTTATAAAGAATATTA+AGG | - | chr3_4:59008756-59008775 | Msa0510150:CDS | 25.0% |
| ! | GCCTTAATATTCTTTATAAG+AGG | + | chr3_4:59008760-59008779 | None:intergenic | 25.0% |
| ! | TTGAACATAATGATAGAATC+TGG | + | chr3_4:59008900-59008919 | None:intergenic | 25.0% |
| TCATTTAAACAATGGATGGA+AGG | - | chr3_4:59000876-59000895 | Msa0510150:intron | 30.0% | |
| AGGTAAGTTAAACATGAGTT+TGG | - | chr3_4:59000896-59000915 | Msa0510150:intron | 30.0% | |
| ACACTTTAACTAATGTCTCA+AGG | - | chr3_4:59001344-59001363 | Msa0510150:intron | 30.0% | |
| CACTTTAACTAATGTCTCAA+GGG | - | chr3_4:59001345-59001364 | Msa0510150:intron | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr3_4:59001446-59001465 | Msa0510140:intron | 30.0% | |
| TTCTTGTAAATAAGACCAGA+GGG | + | chr3_4:59001584-59001603 | Msa0510140:intron | 30.0% | |
| TTTCTTGTAAATAAGACCAG+AGG | + | chr3_4:59001585-59001604 | Msa0510140:intron | 30.0% | |
| GTCAACTTTCTCTTGTAAAT+AGG | - | chr3_4:59001692-59001711 | Msa0510150:CDS | 30.0% | |
| GTGTAGAAAGTAAAATCAAG+GGG | + | chr3_4:59001804-59001823 | Msa0510140:intron | 30.0% | |
| GGTGTAGAAAGTAAAATCAA+GGG | + | chr3_4:59001805-59001824 | Msa0510140:intron | 30.0% | |
| AGGTGTAGAAAGTAAAATCA+AGG | + | chr3_4:59001806-59001825 | Msa0510140:intron | 30.0% | |
| !! | GTAATTGTATCGTTTTTCTC+TGG | + | chr3_4:59001859-59001878 | Msa0510140:intron | 30.0% |
| TGTACTCATATACTATTGCA+GGG | - | chr3_4:59002018-59002037 | Msa0510150:intron | 30.0% | |
| GCTCTGTTTGATAAAAATAG+CGG | - | chr3_4:59002219-59002238 | Msa0510150:intron | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr3_4:59002321-59002340 | Msa0510150:intron | 30.0% | |
| GGAAAAACAAATTACACACA+TGG | - | chr3_4:59002934-59002953 | Msa0510150:intron | 30.0% | |
| ! | AACATGGGTTATAGTTAAAG+TGG | - | chr3_4:59003109-59003128 | Msa0510150:CDS | 30.0% |
| GGTTATAGTTAAAGTGGTAA+GGG | - | chr3_4:59003115-59003134 | Msa0510150:CDS | 30.0% | |
| TAAAGTGGTAAGGGTAAAAA+TGG | - | chr3_4:59003124-59003143 | Msa0510150:CDS | 30.0% | |
| ACGAGTTTATAGCTTATTTC+AGG | + | chr3_4:59003225-59003244 | None:intergenic | 30.0% | |
| ! | TGACAAAAAATAGCTCTGTT+TGG | + | chr3_4:59003262-59003281 | None:intergenic | 30.0% |
| !!! | TAAGCCATAAGCTCTTTTTT+GGG | + | chr3_4:59003369-59003388 | None:intergenic | 30.0% |
| !!! | ATAAGCCATAAGCTCTTTTT+TGG | + | chr3_4:59003370-59003389 | None:intergenic | 30.0% |
| TAACGTAGGAACAAAAGAAA+TGG | + | chr3_4:59003553-59003572 | None:intergenic | 30.0% | |
| !! | GTCATTTTACATTTATCAGC+TGG | - | chr3_4:59003805-59003824 | Msa0510150:intron | 30.0% |
| AAAATTCACTCAAGAGTCTT+AGG | + | chr3_4:59003991-59004010 | None:intergenic | 30.0% | |
| ! | TGACCCCTTAATTTTATGTT+TGG | - | chr3_4:59004549-59004568 | Msa0510150:intron | 30.0% |
| ! | GACCCCTTAATTTTATGTTT+GGG | - | chr3_4:59004550-59004569 | Msa0510150:intron | 30.0% |
| ! | ACCCCTTAATTTTATGTTTG+GGG | - | chr3_4:59004551-59004570 | Msa0510150:intron | 30.0% |
| ACCCCAAACATAAAATTAAG+GGG | + | chr3_4:59004555-59004574 | None:intergenic | 30.0% | |
| GACCCCAAACATAAAATTAA+GGG | + | chr3_4:59004556-59004575 | None:intergenic | 30.0% | |
| ACTAGACATAGGTATGATAA+GGG | + | chr3_4:59004642-59004661 | None:intergenic | 30.0% | |
| TACTAGACATAGGTATGATA+AGG | + | chr3_4:59004643-59004662 | None:intergenic | 30.0% | |
| GAAACTCTCATTGGATAAAT+TGG | + | chr3_4:59004690-59004709 | None:intergenic | 30.0% | |
| GTGAAAAAAGAAACTCTCAT+TGG | + | chr3_4:59004699-59004718 | None:intergenic | 30.0% | |
| !! | AAAATATTTTGAAAGGGGGA+GGG | - | chr3_4:59004811-59004830 | Msa0510150:intron | 30.0% |
| GGAGTTTCATTTACCTTTAT+TGG | + | chr3_4:59005290-59005309 | None:intergenic | 30.0% | |
| TTATAATCAACACACATGAG+AGG | + | chr3_4:59005363-59005382 | None:intergenic | 30.0% | |
| !! | TTTTGTATTTAGGATTGGAG+TGG | + | chr3_4:59005418-59005437 | None:intergenic | 30.0% |
| ! | TTCCCAGTCTTTTTGTATTT+AGG | + | chr3_4:59005428-59005447 | None:intergenic | 30.0% |
| TCAGTAGATATGACTTACAT+TGG | + | chr3_4:59005522-59005541 | None:intergenic | 30.0% | |
| ! | ATATACTAGTGCTATTAGAG+AGG | - | chr3_4:59005621-59005640 | Msa0510150:intron | 30.0% |
| ! | TATACTAGTGCTATTAGAGA+GGG | - | chr3_4:59005622-59005641 | Msa0510150:intron | 30.0% |
| ACGATTAAATGTCAATGTTC+CGG | + | chr3_4:59006249-59006268 | None:intergenic | 30.0% | |
| TATTTGGCCAAAGTTCTTTA+AGG | + | chr3_4:59006437-59006456 | None:intergenic | 30.0% | |
| TTTAATGCACACCTCATATT+TGG | + | chr3_4:59006453-59006472 | None:intergenic | 30.0% | |
| TTGCAACGTGTTATCATATT+CGG | - | chr3_4:59006650-59006669 | Msa0510150:intron | 30.0% | |
| !! | TGATCTTGATTTGTACAATG+GGG | - | chr3_4:59006775-59006794 | Msa0510150:intron | 30.0% |
| GAATATGCTAATTATCAACC+TGG | - | chr3_4:59006851-59006870 | Msa0510150:intron | 30.0% | |
| ! | ATTGACATTGTTTTCCACAT+AGG | - | chr3_4:59006917-59006936 | Msa0510150:intron | 30.0% |
| ! | CAACTGAATTTTTCACTACT+TGG | - | chr3_4:59007326-59007345 | Msa0510150:intron | 30.0% |
| AGAAATAATTACGCAACCAT+TGG | + | chr3_4:59007377-59007396 | None:intergenic | 30.0% | |
| TTCATTGTTGGAACAAAGTA+TGG | - | chr3_4:59007402-59007421 | Msa0510150:intron | 30.0% | |
| AAGAGTTTGAGAATAATGAG+AGG | - | chr3_4:59007571-59007590 | Msa0510150:CDS | 30.0% | |
| ATAGAAGCTATTTATAGGCA+TGG | - | chr3_4:59007637-59007656 | Msa0510150:CDS | 30.0% | |
| GCTTGCAAATAAAACAGTTA+GGG | + | chr3_4:59007710-59007729 | None:intergenic | 30.0% | |
| AGCTTGCAAATAAAACAGTT+AGG | + | chr3_4:59007711-59007730 | None:intergenic | 30.0% | |
| CAAGTGAAAAATAAACTAGG+AGG | - | chr3_4:59007862-59007881 | Msa0510150:intron | 30.0% | |
| TAGATAGAAAACAACAACCA+TGG | - | chr3_4:59008039-59008058 | Msa0510150:intron | 30.0% | |
| GTAGTAATACCTGATAAATG+GGG | + | chr3_4:59008232-59008251 | None:intergenic | 30.0% | |
| GGATAATTAGAAATGGATGT+AGG | + | chr3_4:59008329-59008348 | None:intergenic | 30.0% | |
| ! | ATTTTCAGAGACAAAGACTA+TGG | - | chr3_4:59008489-59008508 | Msa0510150:intron | 30.0% |
| ! | ATGATTCTTTTACCATTTCC+AGG | - | chr3_4:59008586-59008605 | Msa0510150:intron | 30.0% |
| ! | TGATTCTTTTACCATTTCCA+GGG | - | chr3_4:59008587-59008606 | Msa0510150:intron | 30.0% |
| ACTTCATCCTCTACTTAAAG+AGG | + | chr3_4:59000815-59000834 | Msa0510140:intron | 35.0% | |
| ATCTGTTTGGGTGATATGAA+TGG | - | chr3_4:59000951-59000970 | Msa0510150:three_prime_UTR | 35.0% | |
| ! | TTGGGTGATATGAATGGATT+TGG | - | chr3_4:59000957-59000976 | Msa0510150:three_prime_UTR | 35.0% |
| ! | TGAATGGCAATCTTTGAAAG+TGG | + | chr3_4:59000990-59001009 | Msa0510140:intron | 35.0% |
| CATAATATATGCAAGGTCTG+GGG | + | chr3_4:59001439-59001458 | Msa0510140:intron | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | + | chr3_4:59001440-59001459 | Msa0510140:intron | 35.0% | |
| TGCATAATATATGCAAGGTC+TGG | + | chr3_4:59001441-59001460 | Msa0510140:intron | 35.0% | |
| TGAAAGTTTAATACTCCCTC+TGG | - | chr3_4:59001566-59001585 | Msa0510150:CDS | 35.0% | |
| CTTTCTCTTGTAAATAGGAC+CGG | - | chr3_4:59001697-59001716 | Msa0510150:CDS | 35.0% | |
| TTACTTTCTACACCTGTTTG+AGG | - | chr3_4:59001811-59001830 | Msa0510150:intron | 35.0% | |
| CTGTACTCATATACTATTGC+AGG | - | chr3_4:59002017-59002036 | Msa0510150:intron | 35.0% | |
| ! | AGTCTTCATTAGTTGGTTCT+GGG | + | chr3_4:59002080-59002099 | Msa0510140:intron | 35.0% |
| AGAACCAACTAATGAAGACT+GGG | - | chr3_4:59002080-59002099 | Msa0510150:intron | 35.0% | |
| ! | GTATGTTACTTGAAGTTTGC+AGG | + | chr3_4:59002120-59002139 | Msa0510140:intron | 35.0% |
| CTCAAATAAATTGGAACCGA+GGG | + | chr3_4:59002269-59002288 | Msa0510140:intron | 35.0% | |
| TTCCAATTTATTTGAGCCCT+TGG | - | chr3_4:59002273-59002292 | Msa0510150:intron | 35.0% | |
| ATATGTGTGAAATGAGCCAA+GGG | + | chr3_4:59002292-59002311 | Msa0510140:intron | 35.0% | |
| AATATGTGTGAAATGAGCCA+AGG | + | chr3_4:59002293-59002312 | Msa0510140:intron | 35.0% | |
| AGAAAATGGGTCAGATATTC+CGG | - | chr3_4:59002461-59002480 | Msa0510150:CDS | 35.0% | |
| GGGTTATAGTTAAAGTGGTA+AGG | - | chr3_4:59003114-59003133 | Msa0510150:CDS | 35.0% | |
| AACACCCAAAAAAGAGCTTA+TGG | - | chr3_4:59003362-59003381 | Msa0510150:intron | 35.0% | |
| CTTGTAAAACGTCATAACGT+AGG | + | chr3_4:59003567-59003586 | None:intergenic | 35.0% | |
| ACATTTATCAGCTGGTTGAA+CGG | - | chr3_4:59003813-59003832 | Msa0510150:intron | 35.0% | |
| ACAGAGAGAGAAAACATAAG+AGG | + | chr3_4:59004093-59004112 | None:intergenic | 35.0% | |
| CATGTGACTAAGTGTAGATA+AGG | + | chr3_4:59004283-59004302 | None:intergenic | 35.0% | |
| TACGTAACTTAAGTCACGTT+CGG | + | chr3_4:59004390-59004409 | None:intergenic | 35.0% | |
| GGACCCCAAACATAAAATTA+AGG | + | chr3_4:59004557-59004576 | None:intergenic | 35.0% | |
| AAACCGTTTGCATCTGAAAA+AGG | - | chr3_4:59004734-59004753 | Msa0510150:intron | 35.0% | |
| AACCGTTTGCATCTGAAAAA+GGG | - | chr3_4:59004735-59004754 | Msa0510150:intron | 35.0% | |
| !!! | ATCCCTTTTTCAGATGCAAA+CGG | + | chr3_4:59004740-59004759 | None:intergenic | 35.0% |
| TTTGCATCTGAAAAAGGGAT+GGG | - | chr3_4:59004740-59004759 | Msa0510150:intron | 35.0% | |
| !! | CAAAATATTTTGAAAGGGGG+AGG | - | chr3_4:59004810-59004829 | Msa0510150:intron | 35.0% |
| ! | GTATTGAAGGATGATTTTGG+AGG | - | chr3_4:59004924-59004943 | Msa0510150:intron | 35.0% |
| ATGGCTGAAAAACGAACTAA+AGG | - | chr3_4:59005175-59005194 | Msa0510150:intron | 35.0% | |
| ! | TTCTCCTTTGCACTATTTTC+AGG | - | chr3_4:59005488-59005507 | Msa0510150:intron | 35.0% |
| ATAGCACTAGTATATGACAC+TGG | + | chr3_4:59005616-59005635 | None:intergenic | 35.0% | |
| ! | ATACTAGTGCTATTAGAGAG+GGG | - | chr3_4:59005623-59005642 | Msa0510150:intron | 35.0% |
| AACAGTCTCTTGTGTAAAAC+AGG | - | chr3_4:59005711-59005730 | Msa0510150:intron | 35.0% | |
| ACAGTCTCTTGTGTAAAACA+GGG | - | chr3_4:59005712-59005731 | Msa0510150:intron | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | - | chr3_4:59005743-59005762 | Msa0510150:intron | 35.0% | |
| ! | TTTGAAACTGCAACAAGCTT+AGG | + | chr3_4:59005902-59005921 | None:intergenic | 35.0% |
| ! | AAGCTGTACCATTTGTTGAA+TGG | - | chr3_4:59006189-59006208 | Msa0510150:intron | 35.0% |
| ! | AGCTGTACCATTTGTTGAAT+GGG | - | chr3_4:59006190-59006209 | Msa0510150:intron | 35.0% |
| TTTAATCGTAACAGCATGTG+TGG | - | chr3_4:59006260-59006279 | Msa0510150:intron | 35.0% | |
| ! | GGGACATTTTGTTAATCTGT+AGG | - | chr3_4:59006357-59006376 | Msa0510150:intron | 35.0% |
| AAACCTGTGTGTATAAAACC+AGG | + | chr3_4:59006414-59006433 | None:intergenic | 35.0% | |
| CAGGTTTCCTTAAAGAACTT+TGG | - | chr3_4:59006427-59006446 | Msa0510150:intron | 35.0% | |
| AAGAACTTTGGCCAAATATG+AGG | - | chr3_4:59006439-59006458 | Msa0510150:intron | 35.0% | |
| !! | GAGTAAGAGGTATTCATTCA+AGG | - | chr3_4:59006601-59006620 | Msa0510150:intron | 35.0% |
| !! | AATGAGTTTTGTCCAGGATA+AGG | + | chr3_4:59006632-59006651 | None:intergenic | 35.0% |
| ! | TGTTATCATATTCGGTGACA+TGG | - | chr3_4:59006658-59006677 | Msa0510150:intron | 35.0% |
| ! | GTTATCATATTCGGTGACAT+GGG | - | chr3_4:59006659-59006678 | Msa0510150:intron | 35.0% |
| ! | AATGGGGAGAACACTTATTT+TGG | - | chr3_4:59006791-59006810 | Msa0510150:intron | 35.0% |
| !!! | TTTTGGTTCACATGTCCTTT+AGG | - | chr3_4:59006808-59006827 | Msa0510150:intron | 35.0% |
| GAGATGTATCCATTTGCATA+TGG | + | chr3_4:59006950-59006969 | None:intergenic | 35.0% | |
| AAATGGATACATCTCACAGT+GGG | - | chr3_4:59006955-59006974 | Msa0510150:intron | 35.0% | |
| CAGTTCCATATATGATAGCA+AGG | - | chr3_4:59007014-59007033 | Msa0510150:intron | 35.0% | |
| CACATTTATTCATACTGCAG+TGG | - | chr3_4:59007113-59007132 | Msa0510150:intron | 35.0% | |
| TAATAGTACATGGTTTCTGC+AGG | + | chr3_4:59007212-59007231 | None:intergenic | 35.0% | |
| TTTGCAGATATCATGAATGC+TGG | + | chr3_4:59007787-59007806 | None:intergenic | 35.0% | |
| CCATGATTCCATGAACTATA+AGG | + | chr3_4:59007824-59007843 | None:intergenic | 35.0% | |
| CCTTATAGTTCATGGAATCA+TGG | - | chr3_4:59007821-59007840 | Msa0510150:intron | 35.0% | |
| GACGAAAATTGGAAATATGC+AGG | - | chr3_4:59007910-59007929 | Msa0510150:intron | 35.0% | |
| ! | GTTTTCTATCTACTGTTGCA+AGG | + | chr3_4:59008031-59008050 | None:intergenic | 35.0% |
| GGTTCTGCATTATACACATT+TGG | + | chr3_4:59008350-59008369 | None:intergenic | 35.0% | |
| GGAACAATTCATGTTGTTGT+TGG | - | chr3_4:59008414-59008433 | Msa0510150:intron | 35.0% | |
| ! | ACAATTCATGTTGTTGTTGG+TGG | - | chr3_4:59008417-59008436 | Msa0510150:intron | 35.0% |
| ! | TCTCTGAAAATACTCCAAAC+AGG | + | chr3_4:59008480-59008499 | None:intergenic | 35.0% |
| ! | AGAGACAAAGACTATGGTTT+TGG | - | chr3_4:59008495-59008514 | Msa0510150:intron | 35.0% |
| GAGTACAAGAAAAGTAGTGA+TGG | - | chr3_4:59008555-59008574 | Msa0510150:intron | 35.0% | |
| ! | CAAGAAAAGTAGTGATGGAA+AGG | - | chr3_4:59008560-59008579 | Msa0510150:intron | 35.0% |
| TTAAAGAGGCTCTTGATGGA+GGG | + | chr3_4:59000801-59000820 | Msa0510140:intron | 40.0% | |
| CTACTTAAAGAGGCTCTTGA+TGG | + | chr3_4:59000805-59000824 | Msa0510140:intron | 40.0% | |
| TCAAGAGCCTCTTTAAGTAG+AGG | - | chr3_4:59000805-59000824 | Msa0510150:intron | 40.0% | |
| ACCAACTTGAGGATCTGTTT+GGG | - | chr3_4:59000939-59000958 | Msa0510150:intron | 40.0% | |
| !!! | CGCAAGAATGGTTTTGTGAA+TGG | + | chr3_4:59001006-59001025 | Msa0510140:intron | 40.0% |
| AGAATCATGGATCGCAAGAA+TGG | + | chr3_4:59001018-59001037 | Msa0510140:intron | 40.0% | |
| ACCTTACTGCCAAGCAAAAA+CGG | + | chr3_4:59001059-59001078 | Msa0510140:intron | 40.0% | |
| AAGCTCAAATCACCTCAAAC+AGG | + | chr3_4:59001826-59001845 | Msa0510140:intron | 40.0% | |
| ! | TGTTTGAGGTGATTTGAGCT+TGG | - | chr3_4:59001825-59001844 | Msa0510150:intron | 40.0% |
| !! | TTGTATCGTTTTTCTCTGGC+TGG | + | chr3_4:59001855-59001874 | Msa0510140:intron | 40.0% |
| AGAATGGGTGACAGTAAAAC+TGG | - | chr3_4:59002050-59002069 | Msa0510150:intron | 40.0% | |
| !! | GTCTTCATTAGTTGGTTCTG+GGG | + | chr3_4:59002079-59002098 | Msa0510140:intron | 40.0% |
| ! | CAGTCTTCATTAGTTGGTTC+TGG | + | chr3_4:59002081-59002100 | Msa0510140:intron | 40.0% |
| CAGAACCAACTAATGAAGAC+TGG | - | chr3_4:59002079-59002098 | Msa0510150:intron | 40.0% | |
| ! | TAAGCTAGTTGATACTCCCT+CGG | - | chr3_4:59002250-59002269 | Msa0510150:intron | 40.0% |
| GCTCAAATAAATTGGAACCG+AGG | + | chr3_4:59002270-59002289 | Msa0510140:intron | 40.0% | |
| AGCCAAGGGCTCAAATAAAT+TGG | + | chr3_4:59002278-59002297 | Msa0510140:intron | 40.0% | |
| GAAAATGGGTCAGATATTCC+GGG | - | chr3_4:59002462-59002481 | Msa0510150:CDS | 40.0% | |
| TGTTACCAAACAGAGCCTAA+GGG | - | chr3_4:59003329-59003348 | Msa0510150:intron | 40.0% | |
| GTGTTACCAAACAAACCCTT+AGG | + | chr3_4:59003347-59003366 | None:intergenic | 40.0% | |
| GAACAAAAGAAATGGAGGCA+AGG | + | chr3_4:59003545-59003564 | None:intergenic | 40.0% | |
| CGTAGGAACAAAAGAAATGG+AGG | + | chr3_4:59003550-59003569 | None:intergenic | 40.0% | |
| GACTGATAGCTTATAGCTGA+TGG | + | chr3_4:59003894-59003913 | None:intergenic | 40.0% | |
| TTCAGCTCCATAACATTGCA+TGG | - | chr3_4:59004163-59004182 | Msa0510150:intron | 40.0% | |
| ATGGCTACCATGCAATGTTA+TGG | + | chr3_4:59004173-59004192 | None:intergenic | 40.0% | |
| CCAAGGCATATCTTTACACA+TGG | + | chr3_4:59004192-59004211 | None:intergenic | 40.0% | |
| CCATGTGTAAAGATATGCCT+TGG | - | chr3_4:59004189-59004208 | Msa0510150:CDS | 40.0% | |
| CTTAGTCACATGAAACACCT+TGG | - | chr3_4:59004291-59004310 | Msa0510150:intron | 40.0% | |
| ! | CAGAATGTTGCTTACAACCA+AGG | + | chr3_4:59004311-59004330 | None:intergenic | 40.0% |
| ! | AGTGAACTTACGTTGGTGTT+TGG | - | chr3_4:59004357-59004376 | Msa0510150:intron | 40.0% |
| GAACGTGACTTAAGTTACGT+AGG | - | chr3_4:59004389-59004408 | Msa0510150:intron | 40.0% | |
| TTTACGTGACTTAAGTCACG+TGG | - | chr3_4:59004451-59004470 | Msa0510150:CDS | 40.0% | |
| ! | AAGTCACGTGGAGTGTATTT+TGG | - | chr3_4:59004463-59004482 | Msa0510150:intron | 40.0% |
| TATGATAAGGGCAGTATCTG+AGG | + | chr3_4:59004630-59004649 | None:intergenic | 40.0% | |
| GTTTGCATCTGAAAAAGGGA+TGG | - | chr3_4:59004739-59004758 | Msa0510150:intron | 40.0% | |
| AAAAAGGATGGGAGAACTTC+AGG | + | chr3_4:59005091-59005110 | None:intergenic | 40.0% | |
| GAGTTTGGAGGAAAAAGGAT+GGG | + | chr3_4:59005102-59005121 | None:intergenic | 40.0% | |
| AGAGTTTGGAGGAAAAAGGA+TGG | + | chr3_4:59005103-59005122 | None:intergenic | 40.0% | |
| TTGGAGAGTTTGGAGGAAAA+AGG | + | chr3_4:59005107-59005126 | None:intergenic | 40.0% | |
| GTTTATGGCCATGACTCTTT+CGG | + | chr3_4:59005135-59005154 | None:intergenic | 40.0% | |
| ! | GTATTTAGGATTGGAGTGGT+TGG | + | chr3_4:59005414-59005433 | None:intergenic | 40.0% |
| ! | CTGCACGTTGATTGATCAAT+TGG | + | chr3_4:59005466-59005485 | None:intergenic | 40.0% |
| !! | TCCTTTGCACTATTTTCAGG+TGG | - | chr3_4:59005491-59005510 | Msa0510150:intron | 40.0% |
| TCCACCTGAAAATAGTGCAA+AGG | + | chr3_4:59005495-59005514 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr3_4:59005668-59005687 | Msa0510150:intron | 40.0% | |
| TTACACAAGAGACTGTTTCC+AGG | + | chr3_4:59005708-59005727 | None:intergenic | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | - | chr3_4:59005717-59005736 | Msa0510150:intron | 40.0% | |
| GCTGTGTACAATACACCAAA+TGG | - | chr3_4:59005739-59005758 | Msa0510150:intron | 40.0% | |
| GTGTACAATACACCAAATGG+TGG | - | chr3_4:59005742-59005761 | Msa0510150:intron | 40.0% | |
| TAGTATATAAAGGGGCAACC+CGG | + | chr3_4:59005809-59005828 | None:intergenic | 40.0% | |
| TATGACAGATGACAGTTACC+TGG | - | chr3_4:59006144-59006163 | Msa0510150:intron | 40.0% | |
| TATGTCATATCCACTTGTCC+AGG | + | chr3_4:59006165-59006184 | None:intergenic | 40.0% | |
| ! | GCTGTACCATTTGTTGAATG+GGG | - | chr3_4:59006191-59006210 | Msa0510150:intron | 40.0% |
| !!! | GATCCTGGTTTTATACACAC+AGG | - | chr3_4:59006408-59006427 | Msa0510150:intron | 40.0% |
| CAATAAATGCCCCAACCTAT+AGG | + | chr3_4:59006561-59006580 | None:intergenic | 40.0% | |
| ! | TTGGGGCATTTATTGTCTGA+TGG | - | chr3_4:59006566-59006585 | Msa0510150:intron | 40.0% |
| TGTCTGATGGCTCTTATGTA+TGG | - | chr3_4:59006579-59006598 | Msa0510150:intron | 40.0% | |
| GCTCTTATGTATGGAGTAAG+AGG | - | chr3_4:59006588-59006607 | Msa0510150:intron | 40.0% | |
| TGTCTAAATCCTTGATGAGC+TGG | + | chr3_4:59006895-59006914 | None:intergenic | 40.0% | |
| CAAATGGATACATCTCACAG+TGG | - | chr3_4:59006954-59006973 | Msa0510150:intron | 40.0% | |
| ! | GCGAACCTTGCTATCATATA+TGG | + | chr3_4:59007022-59007041 | None:intergenic | 40.0% |
| ! | CGCTTGCTTGCAATCATTTT+AGG | - | chr3_4:59007039-59007058 | Msa0510150:intron | 40.0% |
| TCATAGAAGGATCCTGAGTT+TGG | + | chr3_4:59007158-59007177 | None:intergenic | 40.0% | |
| ! | TGAATCTGGAGTGTCATAGA+AGG | + | chr3_4:59007171-59007190 | None:intergenic | 40.0% |
| TTCTATGACACTCCAGATTC+AGG | - | chr3_4:59007170-59007189 | Msa0510150:intron | 40.0% | |
| !! | ATTTGGCTTTGTTCTCAGCA+GGG | + | chr3_4:59007235-59007254 | None:intergenic | 40.0% |
| !! | AATTTGGCTTTGTTCTCAGC+AGG | + | chr3_4:59007236-59007255 | None:intergenic | 40.0% |
| CTGAGAACAAAGCCAAATTC+TGG | - | chr3_4:59007237-59007256 | Msa0510150:intron | 40.0% | |
| CAGGATCATACGTACTATCT+TGG | + | chr3_4:59007353-59007372 | None:intergenic | 40.0% | |
| TAATTACGCAACCATTGGTC+AGG | + | chr3_4:59007372-59007391 | None:intergenic | 40.0% | |
| ACGAAACATGCCATAATCTG+TGG | + | chr3_4:59007940-59007959 | None:intergenic | 40.0% | |
| TGTGCTGCAAAGATTAACCA+TGG | + | chr3_4:59008059-59008078 | None:intergenic | 40.0% | |
| TCGGTTACTCCTCTAATGAT+TGG | - | chr3_4:59008087-59008106 | Msa0510150:intron | 40.0% | |
| CTTGGCATACCAATCATTAG+AGG | + | chr3_4:59008099-59008118 | None:intergenic | 40.0% | |
| CTCTAATGATTGGTATGCCA+AGG | - | chr3_4:59008097-59008116 | Msa0510150:intron | 40.0% | |
| TAATGATTGGTATGCCAAGG+AGG | - | chr3_4:59008100-59008119 | Msa0510150:intron | 40.0% | |
| AATGATTGGTATGCCAAGGA+GGG | - | chr3_4:59008101-59008120 | Msa0510150:intron | 40.0% | |
| GGCATACTCTTTCGTAGTTA+TGG | + | chr3_4:59008211-59008230 | None:intergenic | 40.0% | |
| ! | AAGAGTATGCCCCATTTATC+AGG | - | chr3_4:59008220-59008239 | Msa0510150:intron | 40.0% |
| TAGAAATGGATGTAGGCTGT+CGG | + | chr3_4:59008322-59008341 | None:intergenic | 40.0% | |
| CATTATTCTGGCACTGTGAA+TGG | - | chr3_4:59008393-59008412 | Msa0510150:intron | 40.0% | |
| ! | ATTCATGTTGTTGTTGGTGG+AGG | - | chr3_4:59008420-59008439 | Msa0510150:intron | 40.0% |
| ! | TTCATGTTGTTGTTGGTGGA+GGG | - | chr3_4:59008421-59008440 | Msa0510150:intron | 40.0% |
| CTGAAAATACTCCAAACAGG+AGG | + | chr3_4:59008477-59008496 | None:intergenic | 40.0% | |
| ATCTCTATAGTCCCTGGAAA+TGG | + | chr3_4:59008601-59008620 | None:intergenic | 40.0% | |
| ! | CTACATAATTCAGAGTGCCA+AGG | + | chr3_4:59008661-59008680 | None:intergenic | 40.0% |
| CTTAAAGAGGCTCTTGATGG+AGG | + | chr3_4:59000802-59000821 | Msa0510140:intron | 45.0% | |
| !! | TCCTCAAGTTGGTGATGAAG+AGG | + | chr3_4:59000932-59000951 | Msa0510140:intron | 45.0% |
| CACCAACTTGAGGATCTGTT+TGG | - | chr3_4:59000938-59000957 | Msa0510150:intron | 45.0% | |
| ACCCAAACAGATCCTCAAGT+TGG | + | chr3_4:59000943-59000962 | Msa0510140:intron | 45.0% | |
| ! | CAGTAATGGAGGCAGAATCA+TGG | + | chr3_4:59001031-59001050 | Msa0510140:intron | 45.0% |
| CAAAAACGGGGAAGCAGTAA+TGG | + | chr3_4:59001045-59001064 | Msa0510140:intron | 45.0% | |
| CTTACTGCCAAGCAAAAACG+GGG | + | chr3_4:59001057-59001076 | Msa0510140:intron | 45.0% | |
| CCTTACTGCCAAGCAAAAAC+GGG | + | chr3_4:59001058-59001077 | Msa0510140:intron | 45.0% | |
| ! | AAGGTCTGGGGTTCAAATCA+CGG | + | chr3_4:59001427-59001446 | Msa0510140:intron | 45.0% |
| TCTCTTGTAAATAGGACCGG+AGG | - | chr3_4:59001700-59001719 | Msa0510150:CDS | 45.0% | |
| CTCTTGTAAATAGGACCGGA+GGG | - | chr3_4:59001701-59001720 | Msa0510150:CDS | 45.0% | |
| GAAACATGTACTACTCCCTC+CGG | + | chr3_4:59001719-59001738 | Msa0510140:intron | 45.0% | |
| TCATATACTATTGCAGGGCG+AGG | - | chr3_4:59002023-59002042 | Msa0510150:intron | 45.0% | |
| CCAACCCAGTCTTCATTAGT+TGG | + | chr3_4:59002087-59002106 | Msa0510140:intron | 45.0% | |
| CCAACTAATGAAGACTGGGT+TGG | - | chr3_4:59002084-59002103 | Msa0510150:intron | 45.0% | |
| GTGTTACCAAACAGAGCCTA+AGG | - | chr3_4:59003328-59003347 | Msa0510150:intron | 45.0% | |
| ACAAACCCTTAGGCTCTGTT+TGG | + | chr3_4:59003337-59003356 | None:intergenic | 45.0% | |
| ! | ACAGAGCCTAAGGGTTTGTT+TGG | - | chr3_4:59003338-59003357 | Msa0510150:intron | 45.0% |
| GAGTCTTAGGCTCTGTTGTT+TGG | + | chr3_4:59003978-59003997 | None:intergenic | 45.0% | |
| ATGCCTTGGACTAACACAGA+AGG | - | chr3_4:59004203-59004222 | Msa0510150:CDS | 45.0% | |
| ACTCCTTCTGTGTTAGTCCA+AGG | + | chr3_4:59004209-59004228 | None:intergenic | 45.0% | |
| CAACGTAAGTTCACTCACGT+TGG | + | chr3_4:59004352-59004371 | None:intergenic | 45.0% | |
| CAACGTGAGTGAACTTACGT+TGG | - | chr3_4:59004350-59004369 | Msa0510150:intron | 45.0% | |
| TGGGAGCAAGCAAATCTTGA+TGG | - | chr3_4:59004496-59004515 | Msa0510150:intron | 45.0% | |
| GGGAGCAAGCAAATCTTGAT+GGG | - | chr3_4:59004497-59004516 | Msa0510150:intron | 45.0% | |
| CATCTGAAAAAGGGATGGGA+GGG | - | chr3_4:59004744-59004763 | Msa0510150:intron | 45.0% | |
| ATCTGAAAAAGGGATGGGAG+GGG | - | chr3_4:59004745-59004764 | Msa0510150:intron | 45.0% | |
| !! | TTTTGAAAGGGGGAGGGTTT+AGG | - | chr3_4:59004817-59004836 | Msa0510150:intron | 45.0% |
| ATTGGGGCTGAGCATATGAA+TGG | + | chr3_4:59005272-59005291 | None:intergenic | 45.0% | |
| CATATGCTCAGCCCCAATAA+AGG | - | chr3_4:59005274-59005293 | Msa0510150:intron | 45.0% | |
| CTATTAGAGAGGGGTAACCT+TGG | - | chr3_4:59005632-59005651 | Msa0510150:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr3_4:59005674-59005693 | Msa0510150:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr3_4:59005675-59005694 | Msa0510150:intron | 45.0% | |
| TCCAAGACTTTCCATGAGCA+AGG | + | chr3_4:59005967-59005986 | None:intergenic | 45.0% | |
| ATGACAGTTACCTGGACAAG+TGG | - | chr3_4:59006152-59006171 | Msa0510150:intron | 45.0% | |
| TTTGGGCCCCATTCAACAAA+TGG | + | chr3_4:59006200-59006219 | None:intergenic | 45.0% | |
| ! | ATTTGTTGAATGGGGCCCAA+AGG | - | chr3_4:59006199-59006218 | Msa0510150:intron | 45.0% |
| TTTGTTGAATGGGGCCCAAA+GGG | - | chr3_4:59006200-59006219 | Msa0510150:intron | 45.0% | |
| GAATCTGCTTTCCACCCTTT+GGG | + | chr3_4:59006217-59006236 | None:intergenic | 45.0% | |
| TGAATCTGCTTTCCACCCTT+TGG | + | chr3_4:59006218-59006237 | None:intergenic | 45.0% | |
| AAGCAGATTCAATCTGCTGC+CGG | - | chr3_4:59006227-59006246 | Msa0510150:intron | 45.0% | |
| TCGTAACAGCATGTGTGGTA+TGG | - | chr3_4:59006265-59006284 | Msa0510150:intron | 45.0% | |
| ! | TTCAAGGCATCTCCTTATCC+TGG | - | chr3_4:59006617-59006636 | Msa0510150:intron | 45.0% |
| !! | CGTTGCAATGAGTTTTGTCC+AGG | + | chr3_4:59006638-59006657 | None:intergenic | 45.0% |
| ! | CATATTCGGTGACATGGGAA+AGG | - | chr3_4:59006664-59006683 | Msa0510150:intron | 45.0% |
| ! | TCAGTGGTGTTAAGTGAACC+AGG | + | chr3_4:59006872-59006891 | None:intergenic | 45.0% |
| CATATGGCAGATCTCCTATG+TGG | + | chr3_4:59006934-59006953 | None:intergenic | 45.0% | |
| GGAGATCTGCCATATGCAAA+TGG | - | chr3_4:59006938-59006957 | Msa0510150:intron | 45.0% | |
| TATGACACTCCAGATTCAGG+TGG | - | chr3_4:59007173-59007192 | Msa0510150:intron | 45.0% | |
| CTCAGCAGGGTAATAGTACA+TGG | + | chr3_4:59007222-59007241 | None:intergenic | 45.0% | |
| GTACGTATGATCCTGACCAA+TGG | - | chr3_4:59007358-59007377 | Msa0510150:intron | 45.0% | |
| TGCAGGTATGCCACAGATTA+TGG | - | chr3_4:59007927-59007946 | Msa0510150:intron | 45.0% | |
| TAGCAGACACTGAACATGAC+TGG | - | chr3_4:59007967-59007986 | Msa0510150:intron | 45.0% | |
| ACTGAACATGACTGGAGAGA+AGG | - | chr3_4:59007975-59007994 | Msa0510150:intron | 45.0% | |
| ACATGACTGGAGAGAAGGAT+CGG | - | chr3_4:59007980-59007999 | Msa0510150:intron | 45.0% | |
| CATTAGAGGAGTAACCGAGT+GGG | + | chr3_4:59008085-59008104 | None:intergenic | 45.0% | |
| TCATTAGAGGAGTAACCGAG+TGG | + | chr3_4:59008086-59008105 | None:intergenic | 45.0% | |
| CTCTTCAAATGAACCCTCCT+TGG | + | chr3_4:59008117-59008136 | None:intergenic | 45.0% | |
| GGTTCATTTGAAGAGCCCAT+GGG | - | chr3_4:59008122-59008141 | Msa0510150:intron | 45.0% | |
| ATTTGAAGAGCCCATGGGAA+GGG | - | chr3_4:59008127-59008146 | Msa0510150:intron | 45.0% | |
| TGCAAACTTTCCCTTCCCAT+GGG | + | chr3_4:59008140-59008159 | None:intergenic | 45.0% | |
| ATGGGAAGGGAAAGTTTGCA+GGG | - | chr3_4:59008140-59008159 | Msa0510150:intron | 45.0% | |
| ! | TCATGTTGTTGTTGGTGGAG+GGG | - | chr3_4:59008422-59008441 | Msa0510150:intron | 45.0% |
| CAAGACATCTCTATAGTCCC+TGG | + | chr3_4:59008607-59008626 | None:intergenic | 45.0% | |
| CAGGGACTATAGAGATGTCT+TGG | - | chr3_4:59008605-59008624 | Msa0510150:intron | 45.0% | |
| TGGTTGTGAGAAAACCACCT+TGG | - | chr3_4:59008641-59008660 | Msa0510150:CDS | 45.0% | |
| ! | CATAATTCAGAGTGCCAAGG+TGG | + | chr3_4:59008658-59008677 | None:intergenic | 45.0% |
| !! | AAATTTATATCAATATATAA+AGG | + | chr3_4:59001391-59001410 | Msa0510140:intron | 5.0% |
| !!! | ATTATTAAATTATTGTTTTT+CGG | - | chr3_4:59002732-59002751 | Msa0510150:CDS | 5.0% |
| !! | TTATAATAAATCAATTATTA+AGG | - | chr3_4:59003083-59003102 | Msa0510150:CDS | 5.0% |
| !! | TATAATAAATCAATTATTAA+GGG | - | chr3_4:59003084-59003103 | Msa0510150:CDS | 5.0% |
| !! | ATAACAATATATATTAAATT+TGG | + | chr3_4:59004961-59004980 | None:intergenic | 5.0% |
| GCCTCTTCATCACCAACTTG+AGG | - | chr3_4:59000928-59000947 | Msa0510150:intron | 50.0% | |
| AAACGGGGAAGCAGTAATGG+AGG | + | chr3_4:59001042-59001061 | Msa0510140:intron | 50.0% | |
| !! | ACTGCTTCCCCGTTTTTGCT+TGG | - | chr3_4:59001047-59001066 | Msa0510150:CDS | 50.0% |
| !! | CCCGTTTTTGCTTGGCAGTA+AGG | - | chr3_4:59001055-59001074 | Msa0510150:CDS | 50.0% |
| GTCAGATATTCCGGGACAGA+GGG | - | chr3_4:59002470-59002489 | Msa0510150:CDS | 50.0% | |
| AAAAGCTACTCCCTCTGTCC+CGG | + | chr3_4:59002483-59002502 | Msa0510140:three_prime_UTR | 50.0% | |
| ! | ATAAGGGCAGTATCTGAGGC+AGG | + | chr3_4:59004626-59004645 | None:intergenic | 50.0% |
| GCATCTGAAAAAGGGATGGG+AGG | - | chr3_4:59004743-59004762 | Msa0510150:intron | 50.0% | |
| ATGGGAGGGGAGAATCTTGA+AGG | - | chr3_4:59004758-59004777 | Msa0510150:intron | 50.0% | |
| TGGGAGAACTTCAGGAAGGA+GGG | + | chr3_4:59005083-59005102 | None:intergenic | 50.0% | |
| ATGGGAGAACTTCAGGAAGG+AGG | + | chr3_4:59005084-59005103 | None:intergenic | 50.0% | |
| AGGATGGGAGAACTTCAGGA+AGG | + | chr3_4:59005087-59005106 | None:intergenic | 50.0% | |
| TTCGGCGATGTTGGAGAGTT+TGG | + | chr3_4:59005117-59005136 | None:intergenic | 50.0% | |
| CATGACTCTTTCGGCGATGT+TGG | + | chr3_4:59005126-59005145 | None:intergenic | 50.0% | |
| CAACATCGCCGAAAGAGTCA+TGG | - | chr3_4:59005124-59005143 | Msa0510150:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr3_4:59005652-59005671 | None:intergenic | 50.0% | |
| GCCTTGCTCATGGAAAGTCT+TGG | - | chr3_4:59005963-59005982 | Msa0510150:intron | 50.0% | |
| TACCTGGGGAAGAATAGGGA+GGG | + | chr3_4:59006536-59006555 | None:intergenic | 50.0% | |
| GGTGTACCTGGGGAAGAATA+GGG | + | chr3_4:59006540-59006559 | None:intergenic | 50.0% | |
| AGGTGTACCTGGGGAAGAAT+AGG | + | chr3_4:59006541-59006560 | None:intergenic | 50.0% | |
| TCTTCCCCAGGTACACCTAT+AGG | - | chr3_4:59006543-59006562 | Msa0510150:intron | 50.0% | |
| CCAACCTATAGGTGTACCTG+GGG | + | chr3_4:59006550-59006569 | None:intergenic | 50.0% | |
| CCCAACCTATAGGTGTACCT+GGG | + | chr3_4:59006551-59006570 | None:intergenic | 50.0% | |
| CCCAGGTACACCTATAGGTT+GGG | - | chr3_4:59006548-59006567 | Msa0510150:intron | 50.0% | |
| CCAGGTACACCTATAGGTTG+GGG | - | chr3_4:59006549-59006568 | Msa0510150:intron | 50.0% | |
| AACCATCACGCTCAGCCTAA+AGG | + | chr3_4:59006826-59006845 | None:intergenic | 50.0% | |
| ATCCTTGATGAGCTGGTCAG+TGG | + | chr3_4:59006888-59006907 | None:intergenic | 50.0% | |
| GTGGAAATCACGAACGCTCT+TGG | - | chr3_4:59007132-59007151 | Msa0510150:intron | 50.0% | |
| CCAGATTCAGGTGGAGAATG+CGG | - | chr3_4:59007182-59007201 | Msa0510150:intron | 50.0% | |
| GGGTTCATTTGAAGAGCCCA+TGG | - | chr3_4:59008121-59008140 | Msa0510150:intron | 50.0% | |
| CATTTGAAGAGCCCATGGGA+AGG | - | chr3_4:59008126-59008145 | Msa0510150:intron | 50.0% | |
| CTGCAAACTTTCCCTTCCCA+TGG | + | chr3_4:59008141-59008160 | None:intergenic | 50.0% | |
| CATGGGAAGGGAAAGTTTGC+AGG | - | chr3_4:59008139-59008158 | Msa0510150:intron | 50.0% | |
| TGGGAAGGGAAAGTTTGCAG+GGG | - | chr3_4:59008141-59008160 | Msa0510150:intron | 50.0% | |
| ! | CATGTTGTTGTTGGTGGAGG+GGG | - | chr3_4:59008423-59008442 | Msa0510150:intron | 50.0% |
| TGCAGGGCGAGGATACAGAA+TGG | - | chr3_4:59002034-59002053 | Msa0510150:intron | 55.0% | |
| GCAGGGCGAGGATACAGAAT+GGG | - | chr3_4:59002035-59002054 | Msa0510150:intron | 55.0% | |
| GGTCAGATATTCCGGGACAG+AGG | - | chr3_4:59002469-59002488 | Msa0510150:CDS | 55.0% | |
| ! | GTATCTGAGGCAGGATGAGG+AGG | + | chr3_4:59004617-59004636 | None:intergenic | 55.0% |
| ! | GCAGTATCTGAGGCAGGATG+AGG | + | chr3_4:59004620-59004639 | None:intergenic | 55.0% |
| GGCGATGTTGGAGAGTTTGG+AGG | + | chr3_4:59005114-59005133 | None:intergenic | 55.0% | |
| TCAACATGTCCACCCAACCC+CGG | - | chr3_4:59005224-59005243 | Msa0510150:intron | 55.0% | |
| ATCTACCCGTCCAATGCCAC+CGG | + | chr3_4:59005246-59005265 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr3_4:59005687-59005706 | Msa0510150:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | + | chr3_4:59005782-59005801 | None:intergenic | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | + | chr3_4:59005783-59005802 | None:intergenic | 55.0% | |
| CGCGGATACACAGGTGCTTT+AGG | + | chr3_4:59005944-59005963 | None:intergenic | 55.0% | |
| GACTTTCCATGAGCAAGGCG+CGG | + | chr3_4:59005962-59005981 | None:intergenic | 55.0% | |
| TGGGGAAGAATAGGGAGGGA+AGG | + | chr3_4:59006532-59006551 | None:intergenic | 55.0% | |
| TTCCCTCCCTATTCTTCCCC+AGG | - | chr3_4:59006531-59006550 | Msa0510150:intron | 55.0% | |
| GTACCTGGGGAAGAATAGGG+AGG | + | chr3_4:59006537-59006556 | None:intergenic | 55.0% | |
| CCCCAGGTACACCTATAGGT+TGG | - | chr3_4:59006547-59006566 | Msa0510150:intron | 55.0% | |
| CCCCAACCTATAGGTGTACC+TGG | + | chr3_4:59006552-59006571 | None:intergenic | 55.0% | |
| GTCCTTTAGGCTGAGCGTGA+TGG | - | chr3_4:59006821-59006840 | Msa0510150:intron | 55.0% | |
| CACCACTGACCAGCTCATCA+AGG | - | chr3_4:59006883-59006902 | Msa0510150:intron | 55.0% | |
| GAACGCTCTTGGCCAAACTC+AGG | - | chr3_4:59007143-59007162 | Msa0510150:intron | 55.0% | |
| CCGCATTCTCCACCTGAATC+TGG | + | chr3_4:59007185-59007204 | None:intergenic | 55.0% | |
| TTTGCAGCACATCGCCCACT+CGG | - | chr3_4:59008068-59008087 | Msa0510150:intron | 55.0% | |
| GGGAAAGTTTGCAGGGGCTT+TGG | - | chr3_4:59008147-59008166 | Msa0510150:intron | 55.0% | |
| TCACCACAGCACCTCCTGTT+TGG | - | chr3_4:59008463-59008482 | Msa0510150:intron | 55.0% | |
| !! | ACTCCAAACAGGAGGTGCTG+TGG | + | chr3_4:59008469-59008488 | None:intergenic | 55.0% |
| CTCACAACCATCGTGCACAC+AGG | + | chr3_4:59008631-59008650 | None:intergenic | 55.0% | |
| TCTACCCGTCCAATGCCACC+GGG | + | chr3_4:59005245-59005264 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr3_4:59005641-59005660 | Msa0510150:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | - | chr3_4:59005787-59005806 | Msa0510150:intron | 60.0% |
| TGAGCAAGGCGCGGATACAC+AGG | + | chr3_4:59005953-59005972 | None:intergenic | 60.0% | |
| GTGTATCCGCGCCTTGCTCA+TGG | - | chr3_4:59005953-59005972 | Msa0510150:intron | 60.0% | |
| GTTGAATGGGGCCCAAAGGG+TGG | - | chr3_4:59006203-59006222 | Msa0510150:intron | 60.0% | |
| GTCTTGGCCTGTGTGCACGA+TGG | - | chr3_4:59008621-59008640 | Msa0510150:intron | 60.0% | |
| ACATGTCCACCCAACCCCGG+TGG | - | chr3_4:59005227-59005246 | Msa0510150:intron | 65.0% | |
| CGTCCAATGCCACCGGGGTT+GGG | + | chr3_4:59005239-59005258 | None:intergenic | 65.0% | |
| ! | CCAACCCCGGTGGCATTGGA+CGG | - | chr3_4:59005237-59005256 | Msa0510150:intron | 65.0% |
| ! | CAACCCCGGTGGCATTGGAC+GGG | - | chr3_4:59005238-59005257 | Msa0510150:intron | 65.0% |
| CTACCCGTCCAATGCCACCG+GGG | + | chr3_4:59005244-59005263 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr3_4:59005777-59005796 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | - | chr3_4:59005788-59005807 | Msa0510150:intron | 65.0% |
| GGTCAACCTGCGCGAACCGT+TGG | - | chr3_4:59006378-59006397 | Msa0510150:intron | 65.0% | |
| AACCTGCGCGAACCGTTGGC+TGG | - | chr3_4:59006382-59006401 | Msa0510150:intron | 65.0% | |
| ACCAGGATCGCGCCAGCCAA+CGG | + | chr3_4:59006397-59006416 | None:intergenic | 65.0% | |
| CCAATGCCACCGGGGTTGGG+TGG | + | chr3_4:59005236-59005255 | None:intergenic | 70.0% | |
| CCACCCAACCCCGGTGGCAT+TGG | - | chr3_4:59005233-59005252 | Msa0510150:intron | 70.0% | |
| CCGTCCAATGCCACCGGGGT+TGG | + | chr3_4:59005240-59005259 | None:intergenic | 70.0% | |
| ! | ACCGTTGGCTGGCGCGATCC+TGG | - | chr3_4:59006393-59006412 | Msa0510150:intron | 70.0% |
| CGCCAGCCAACGGTTCGCGC+AGG | + | chr3_4:59006387-59006406 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 59000774 | 59008925 | 59000774 | ID=Msa0510150;Name=Msa0510150 |
| chr3_4 | mRNA | 59000774 | 59008925 | 59000774 | ID=Msa0510150-mRNA-1;Parent=Msa0510150;Name=Msa0510150-mRNA-1;_AED=0.31;_eAED=0.31;_QI=117|1|1|1|0.91|0.84|13|104|620 |
| chr3_4 | exon | 59000774 | 59000798 | 59000774 | ID=Msa0510150-mRNA-1:exon:13763;Parent=Msa0510150-mRNA-1 |
| chr3_4 | exon | 59000949 | 59001333 | 59000949 | ID=Msa0510150-mRNA-1:exon:13762;Parent=Msa0510150-mRNA-1 |
| chr3_4 | exon | 59001458 | 59001767 | 59001458 | ID=Msa0510150-mRNA-1:exon:13761;Parent=Msa0510150-mRNA-1 |
| chr3_4 | exon | 59002441 | 59002566 | 59002441 | ID=Msa0510150-mRNA-1:exon:13760;Parent=Msa0510150-mRNA-1 |
| chr3_4 | exon | 59002664 | 59002869 | 59002664 | ID=Msa0510150-mRNA-1:exon:13759;Parent=Msa0510150-mRNA-1 |
| chr3_4 | exon | 59003014 | 59003146 | 59003014 | ID=Msa0510150-mRNA-1:exon:13758;Parent=Msa0510150-mRNA-1 |
| chr3_4 | exon | 59003239 | 59003320 | 59003239 | ID=Msa0510150-mRNA-1:exon:13757;Parent=Msa0510150-mRNA-1 |
| chr3_4 | exon | 59003418 | 59003547 | 59003418 | ID=Msa0510150-mRNA-1:exon:13756;Parent=Msa0510150-mRNA-1 |
| chr3_4 | exon | 59003708 | 59003800 | 59003708 | ID=Msa0510150-mRNA-1:exon:13755;Parent=Msa0510150-mRNA-1 |
| chr3_4 | exon | 59004176 | 59004298 | 59004176 | ID=Msa0510150-mRNA-1:exon:13754;Parent=Msa0510150-mRNA-1 |
| chr3_4 | exon | 59004404 | 59004479 | 59004404 | ID=Msa0510150-mRNA-1:exon:13753;Parent=Msa0510150-mRNA-1 |
| chr3_4 | exon | 59007569 | 59007660 | 59007569 | ID=Msa0510150-mRNA-1:exon:13752;Parent=Msa0510150-mRNA-1 |
| chr3_4 | exon | 59008623 | 59008925 | 59008623 | ID=Msa0510150-mRNA-1:exon:13751;Parent=Msa0510150-mRNA-1 |
| chr3_4 | five_prime_UTR | 59008809 | 59008925 | 59008809 | ID=Msa0510150-mRNA-1:five_prime_utr;Parent=Msa0510150-mRNA-1 |
| chr3_4 | CDS | 59008623 | 59008808 | 59008623 | ID=Msa0510150-mRNA-1:cds;Parent=Msa0510150-mRNA-1 |
| chr3_4 | CDS | 59007569 | 59007660 | 59007569 | ID=Msa0510150-mRNA-1:cds;Parent=Msa0510150-mRNA-1 |
| chr3_4 | CDS | 59004404 | 59004479 | 59004404 | ID=Msa0510150-mRNA-1:cds;Parent=Msa0510150-mRNA-1 |
| chr3_4 | CDS | 59004176 | 59004298 | 59004176 | ID=Msa0510150-mRNA-1:cds;Parent=Msa0510150-mRNA-1 |
| chr3_4 | CDS | 59003708 | 59003800 | 59003708 | ID=Msa0510150-mRNA-1:cds;Parent=Msa0510150-mRNA-1 |
| chr3_4 | CDS | 59003418 | 59003547 | 59003418 | ID=Msa0510150-mRNA-1:cds;Parent=Msa0510150-mRNA-1 |
| chr3_4 | CDS | 59003239 | 59003320 | 59003239 | ID=Msa0510150-mRNA-1:cds;Parent=Msa0510150-mRNA-1 |
| chr3_4 | CDS | 59003014 | 59003146 | 59003014 | ID=Msa0510150-mRNA-1:cds;Parent=Msa0510150-mRNA-1 |
| chr3_4 | CDS | 59002664 | 59002869 | 59002664 | ID=Msa0510150-mRNA-1:cds;Parent=Msa0510150-mRNA-1 |
| chr3_4 | CDS | 59002441 | 59002566 | 59002441 | ID=Msa0510150-mRNA-1:cds;Parent=Msa0510150-mRNA-1 |
| chr3_4 | CDS | 59001458 | 59001767 | 59001458 | ID=Msa0510150-mRNA-1:cds;Parent=Msa0510150-mRNA-1 |
| chr3_4 | CDS | 59001028 | 59001333 | 59001028 | ID=Msa0510150-mRNA-1:cds;Parent=Msa0510150-mRNA-1 |
| chr3_4 | three_prime_UTR | 59000949 | 59001027 | 59000949 | ID=Msa0510150-mRNA-1:three_prime_utr;Parent=Msa0510150-mRNA-1 |
| chr3_4 | three_prime_UTR | 59000774 | 59000798 | 59000774 | ID=Msa0510150-mRNA-1:three_prime_utr;Parent=Msa0510150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
