Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0468830 | XP_003601857.2 | 97.990 | 398 | 8 | 0 | 1 | 398 | 68 | 465 | 0.0 | 811 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0468830 | sp|Q8H1F2|RGS1_ARATH | 64.051 | 395 | 137 | 2 | 1 | 394 | 67 | 457 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0468830 | G7J2K1 | 97.990 | 398 | 8 | 0 | 1 | 398 | 68 | 465 | 0.0 | 811 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0422300 | Msa0468830 | 0.983958 | 3.463266e-159 | -8.615850e-47 |
| Msa0468780 | Msa0468830 | 0.930677 | 1.155711e-93 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0468830 | MtrunA17_Chr3g0123191 | 97.990 | 398 | 8 | 0 | 1 | 398 | 68 | 465 | 0.0 | 811 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0468830 | AT3G26090.1 | 64.051 | 395 | 137 | 2 | 1 | 394 | 67 | 457 | 0.0 | 549 |
| Msa0468830 | AT3G26090.2 | 67.273 | 330 | 108 | 0 | 1 | 330 | 67 | 396 | 2.46e-172 | 487 |
Find 123 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACTAAAGGCAGTGGTTTC+TGG | 0.139148 | 3_3:+70536444 | Msa0468830:five_prime_UTR |
| ATGGTTGGCTTCTATCTTTC+AGG | 0.158653 | 3_3:+70536375 | Msa0468830:five_prime_UTR |
| TGCTAAGAGGCTTCTTTATA+TGG | 0.206814 | 3_3:-70537471 | None:intergenic |
| CAACCTTCTTCTATCAATTA+TGG | 0.226071 | 3_3:+70536496 | Msa0468830:exon |
| TCATATTGTATTGGTAATAA+TGG | 0.234418 | 3_3:+70536356 | None:intergenic |
| TTGTGGACACTAACCATAAA+TGG | 0.245948 | 3_3:-70539646 | None:intergenic |
| CGCACAATGGGCCAGGCTTT+GGG | 0.270464 | 3_3:+70538229 | Msa0468830:CDS |
| TTCTCTTGAACAAGAAATTC+AGG | 0.271912 | 3_3:+70538326 | Msa0468830:CDS |
| CACATTCCTCCTGGAACTTC+AGG | 0.290302 | 3_3:-70539397 | None:intergenic |
| CATTTGTTCTGTCAGTTGTA+TGG | 0.298681 | 3_3:+70537882 | Msa0468830:intron |
| TCGCACAATGGGCCAGGCTT+TGG | 0.310716 | 3_3:+70538228 | Msa0468830:CDS |
| AAACTAATAATCAGAATTAA+AGG | 0.311010 | 3_3:-70539940 | None:intergenic |
| AAAGAATAAGTGGAATTAAA+AGG | 0.316374 | 3_3:-70537071 | None:intergenic |
| AGATACTTTAACCACTTCTT+AGG | 0.319174 | 3_3:+70539831 | Msa0468830:three_prime_UTR |
| CTGGCAACAACTTGAATTAC+AGG | 0.331361 | 3_3:-70536470 | None:intergenic |
| ATTGAGAAGTACATAGTTGC+AGG | 0.335851 | 3_3:+70538881 | Msa0468830:CDS |
| AGCTTATCCAATGGTTCATT+AGG | 0.342753 | 3_3:-70538304 | None:intergenic |
| GCCCATTGTGCGAAATTCTC+TGG | 0.360100 | 3_3:-70538218 | None:intergenic |
| TATATCTACAGTTGCTTGGC+TGG | 0.366042 | 3_3:+70538767 | Msa0468830:intron |
| AATCTTCTTCCTGAAGTTCC+AGG | 0.366374 | 3_3:+70539388 | Msa0468830:CDS |
| ATGTAGGAAGGAAGACAAAA+AGG | 0.367948 | 3_3:+70539681 | Msa0468830:three_prime_UTR |
| GGTGAAGGTCCACTAGGGTT+TGG | 0.369983 | 3_3:+70536818 | Msa0468830:CDS |
| CCCTGGATTGTAGGTGCTGC+TGG | 0.385271 | 3_3:+70537096 | Msa0468830:CDS |
| TATCTTTCAGGCTTCTCATA+TGG | 0.386081 | 3_3:+70536387 | Msa0468830:five_prime_UTR |
| TAATCTTATTCATATTGTAT+TGG | 0.386604 | 3_3:+70536347 | None:intergenic |
| CAAAACTAAAAGAAGAAATC+TGG | 0.386884 | 3_3:-70537963 | None:intergenic |
| TGTATGTTGCCACTTTGGTT+GGG | 0.390598 | 3_3:+70537548 | Msa0468830:CDS |
| TGTGATAATACCCCACTATC+AGG | 0.396001 | 3_3:-70538256 | None:intergenic |
| CTGTGCATCATATAGAGTTC+AGG | 0.397383 | 3_3:+70537581 | Msa0468830:CDS |
| AGAACTTGGCAAAAGATTAC+TGG | 0.399670 | 3_3:+70539360 | Msa0468830:intron |
| ATTTGTTCTGTCAGTTGTAT+GGG | 0.411134 | 3_3:+70537883 | Msa0468830:intron |
| CTGCGTGAGAAGAATCTATA+TGG | 0.411292 | 3_3:+70538847 | Msa0468830:CDS |
| CTACCATAATTGATAGAAGA+AGG | 0.423216 | 3_3:-70536499 | None:intergenic |
| TTATTTCCAGTTTGGGGTGA+AGG | 0.425413 | 3_3:+70536803 | Msa0468830:intron |
| TCCAGAGAATTTCGCACAAT+GGG | 0.425473 | 3_3:+70538217 | Msa0468830:CDS |
| GGCTAGTATCATGTACATCT+TGG | 0.427662 | 3_3:+70539751 | Msa0468830:three_prime_UTR |
| TTAGGATCTACCCTCGAAAT+CGG | 0.434650 | 3_3:-70538286 | None:intergenic |
| TTGTATGTTGCCACTTTGGT+TGG | 0.435848 | 3_3:+70537547 | Msa0468830:CDS |
| TTGTTAACATCTGTATAGTC+AGG | 0.438021 | 3_3:+70539730 | Msa0468830:three_prime_UTR |
| CCGACTCATGACTTGGTACT+TGG | 0.448826 | 3_3:+70539555 | Msa0468830:exon |
| GTCATACAAAGGACGTCGTT+AGG | 0.450004 | 3_3:-70539915 | None:intergenic |
| AACACATGAAGGCAAACAAC+TGG | 0.456389 | 3_3:-70537526 | None:intergenic |
| CATCTCTCATAGAAGCAAAC+AGG | 0.456965 | 3_3:+70539149 | Msa0468830:CDS |
| CACAAGGTTCCTCGTACTAA+AGG | 0.459346 | 3_3:+70536431 | Msa0468830:five_prime_UTR |
| TCAAATTTGAAAAGAGCCAT+TGG | 0.462101 | 3_3:+70536662 | Msa0468830:CDS |
| TCTTCTCACGCAGTCATGTT+CGG | 0.462374 | 3_3:-70538837 | None:intergenic |
| ATTGTATTGGTAATAATGGT+TGG | 0.465214 | 3_3:+70536360 | Msa0468830:five_prime_UTR |
| AGAATTTCGCACAATGGGCC+AGG | 0.465661 | 3_3:+70538222 | Msa0468830:CDS |
| ACCAGCAGCACCTACAATCC+AGG | 0.466696 | 3_3:-70537097 | None:intergenic |
| AAAGGCTAGCATACTTGTGT+TGG | 0.468592 | 3_3:+70538132 | Msa0468830:intron |
| GCTTTGGGCATACCTGATAG+TGG | 0.472370 | 3_3:+70538244 | Msa0468830:CDS |
| ATCTCATATCACATTCCTCC+TGG | 0.475428 | 3_3:-70539406 | None:intergenic |
| AGAAGATGATCATGGTGAAA+AGG | 0.477104 | 3_3:-70539506 | None:intergenic |
| ATCCAGGGCAAAAGAATAAG+TGG | 0.484753 | 3_3:-70537081 | None:intergenic |
| GCTAGTATCATGTACATCTT+GGG | 0.487898 | 3_3:+70539752 | Msa0468830:three_prime_UTR |
| GTTTGGGGTGAAGGTCCACT+AGG | 0.490024 | 3_3:+70536812 | Msa0468830:intron |
| AGGAACCTTGTGAACTATGA+AGG | 0.490710 | 3_3:-70536420 | None:intergenic |
| TAAAGTATCTTGAAAAGTGT+AGG | 0.491284 | 3_3:-70539818 | None:intergenic |
| GTGAGGAGGTGTATGTAGGA+AGG | 0.492586 | 3_3:+70539669 | Msa0468830:three_prime_UTR |
| GTATGTTGCCACTTTGGTTG+GGG | 0.493758 | 3_3:+70537549 | Msa0468830:CDS |
| TACGAGCTTGAGCAAATGAC+AGG | 0.497023 | 3_3:+70539437 | Msa0468830:CDS |
| ATATCTACAGTTGCTTGGCT+GGG | 0.500177 | 3_3:+70538768 | Msa0468830:intron |
| TGTGTTGTATGTTGCCACTT+TGG | 0.506197 | 3_3:+70537543 | Msa0468830:CDS |
| GTAATATATCTACAGTTGCT+TGG | 0.514126 | 3_3:+70538763 | Msa0468830:intron |
| CACAAAGTGAACCGATTTCG+AGG | 0.518175 | 3_3:+70538275 | Msa0468830:CDS |
| AAAGTATCTTGAAAAGTGTA+GGG | 0.528393 | 3_3:-70539817 | None:intergenic |
| AATGATACCGACTCATGACT+TGG | 0.528462 | 3_3:+70539548 | Msa0468830:exon |
| CTTTGGGCATACCTGATAGT+GGG | 0.533397 | 3_3:+70538245 | Msa0468830:CDS |
| CAGTCATGTTACATGTGGGC+AGG | 0.535899 | 3_3:+70536688 | Msa0468830:CDS |
| TACATACACCTCCTCACTTG+TGG | 0.537541 | 3_3:-70539663 | None:intergenic |
| TATCAGGTATGCCCAAAGCC+TGG | 0.539962 | 3_3:-70538240 | None:intergenic |
| GAGATCAGCGCGTGCAAGGT+CGG | 0.544627 | 3_3:-70539187 | None:intergenic |
| GGTAGATCCTAATGAACCAT+TGG | 0.546664 | 3_3:+70538297 | Msa0468830:CDS |
| TTGATGAACTCAGAGACCTC+TGG | 0.548285 | 3_3:+70537605 | Msa0468830:CDS |
| GATCGTGCACTTGATGAAAA+CGG | 0.548765 | 3_3:+70539230 | Msa0468830:CDS |
| TGATAGAAGAAGGTTGAAGC+TGG | 0.552933 | 3_3:-70536489 | None:intergenic |
| CTTGTATCATCCGTATCCGT+TGG | 0.553758 | 3_3:+70537637 | Msa0468830:CDS |
| GAAAGAGATCAGCGCGTGCA+AGG | 0.557629 | 3_3:-70539191 | None:intergenic |
| TATCTACAGTTGCTTGGCTG+GGG | 0.561891 | 3_3:+70538769 | Msa0468830:intron |
| ATGTGGCAGCGATTGCTAAG+AGG | 0.564850 | 3_3:-70537484 | None:intergenic |
| ATGAAGGCAAACAACTGGTA+TGG | 0.568177 | 3_3:-70537521 | None:intergenic |
| TTCAAGAGAAGCTTATCCAA+TGG | 0.569256 | 3_3:-70538313 | None:intergenic |
| GTTCCTCGTACTAAAGGCAG+TGG | 0.569723 | 3_3:+70536437 | Msa0468830:five_prime_UTR |
| TTTGGGGTGAAGGTCCACTA+GGG | 0.571817 | 3_3:+70536813 | Msa0468830:CDS |
| ACAAGTGAGGAGGTGTATGT+AGG | 0.576883 | 3_3:+70539665 | Msa0468830:three_prime_UTR |
| TGCTCTCGCAAATCAGCTTG+AGG | 0.581392 | 3_3:+70538185 | Msa0468830:CDS |
| CCAAGGTTAAGTTCTGTGCA+TGG | 0.583634 | 3_3:+70539473 | Msa0468830:CDS |
| ATTTCCCTTCATAGTTCACA+AGG | 0.585568 | 3_3:+70536415 | Msa0468830:five_prime_UTR |
| ATCCAGAGAATTTCGCACAA+TGG | 0.587069 | 3_3:+70538216 | Msa0468830:CDS |
| GAATGTGATATGAGATGTAA+CGG | 0.587155 | 3_3:+70539413 | Msa0468830:CDS |
| CAGGGTGGAATTATTCTCCA+AGG | 0.588521 | 3_3:+70539456 | Msa0468830:CDS |
| ATGGTTAGTGTCCACAAGTG+AGG | 0.590975 | 3_3:+70539652 | Msa0468830:three_prime_UTR |
| AGTTCTTCAGAAGATGATCA+TGG | 0.591447 | 3_3:-70539514 | None:intergenic |
| CCATGCACAGAACTTAACCT+TGG | 0.595101 | 3_3:-70539473 | None:intergenic |
| TGGCAACATACAACACATGA+AGG | 0.596405 | 3_3:-70537537 | None:intergenic |
| AATTAAAGGCGGTCATACAA+AGG | 0.603400 | 3_3:-70539926 | None:intergenic |
| GGAACCTTGTGAACTATGAA+GGG | 0.610171 | 3_3:-70536419 | None:intergenic |
| AATTTGAAAAGAGCCATTGG+TGG | 0.610473 | 3_3:+70536665 | Msa0468830:CDS |
| AAATTCATGACAATATCTCA+TGG | 0.611661 | 3_3:+70537927 | Msa0468830:CDS |
| TGTAACATGACTGCCACCAA+TGG | 0.617375 | 3_3:-70536678 | None:intergenic |
| TGAGAAGAATCTATATGGCA+AGG | 0.622563 | 3_3:+70538852 | Msa0468830:CDS |
| AGCAGTTACCCCAACCAAAG+TGG | 0.622897 | 3_3:-70537557 | None:intergenic |
| CTTCTGAAGAACTCAGAATG+TGG | 0.624150 | 3_3:+70539524 | Msa0468830:CDS |
| AAAACTCTAGACCTAAGAAG+TGG | 0.624354 | 3_3:-70539842 | None:intergenic |
| CCAGCAGCACCTACAATCCA+GGG | 0.628273 | 3_3:-70537096 | None:intergenic |
| ACAAAGTGAACCGATTTCGA+GGG | 0.634894 | 3_3:+70538276 | Msa0468830:CDS |
| AACAGCAAACCAAACCCTAG+TGG | 0.642601 | 3_3:-70536827 | None:intergenic |
| GGTGGCAGTCATGTTACATG+TGG | 0.644135 | 3_3:+70536683 | Msa0468830:CDS |
| GAACTCAGAGACCTCTGGCG+AGG | 0.644619 | 3_3:+70537610 | Msa0468830:CDS |
| GCTGCCACATGTCAGTTCAG+TGG | 0.646737 | 3_3:+70537497 | Msa0468830:CDS |
| GTTAGTGTCCACAAGTGAGG+AGG | 0.649495 | 3_3:+70539655 | Msa0468830:three_prime_UTR |
| AAAAGGAATGATCTGATCAG+CGG | 0.662063 | 3_3:-70537054 | None:intergenic |
| ATACAAGTATTCCTCGCCAG+AGG | 0.663000 | 3_3:-70537621 | None:intergenic |
| TTTGGGCATACCTGATAGTG+GGG | 0.663068 | 3_3:+70538246 | Msa0468830:CDS |
| CCAAGTACCAAGTCATGAGT+CGG | 0.667900 | 3_3:-70539555 | None:intergenic |
| AAGCTGATTTGCGAGAGCAG+CGG | 0.669302 | 3_3:-70538181 | None:intergenic |
| AAACCACTGCCTTTAGTACG+AGG | 0.671478 | 3_3:-70536440 | None:intergenic |
| CTTCTTCCTGAAGTTCCAGG+AGG | 0.685626 | 3_3:+70539391 | Msa0468830:CDS |
| GTGGCAGTCATGTTACATGT+GGG | 0.712301 | 3_3:+70536684 | Msa0468830:CDS |
| CTAATAATCAGAATTAAAGG+CGG | 0.715963 | 3_3:-70539937 | None:intergenic |
| ACGAGCTTGAGCAAATGACA+GGG | 0.717234 | 3_3:+70539438 | Msa0468830:CDS |
| AGCTTGAGCAAATGACAGGG+TGG | 0.719805 | 3_3:+70539441 | Msa0468830:CDS |
| TGGTCCACTGAACTGACATG+TGG | 0.760232 | 3_3:-70537501 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAACAGT+AGG | - | chr3_3:70537998-70538017 | None:intergenic | 10.0% |
| !!! | ATATTGTAACATATATTTTC+TGG | + | chr3_3:70537820-70537839 | Msa0468830:intron | 15.0% |
| !!! | CAATTTTATTTAGAGATTAA+AGG | - | chr3_3:70538599-70538618 | None:intergenic | 15.0% |
| !!! | AATAAAATTGTTGTTACATT+TGG | + | chr3_3:70538609-70538628 | Msa0468830:intron | 15.0% |
| !!! | AAATTTTGGTTTTACAATTT+TGG | - | chr3_3:70538987-70539006 | None:intergenic | 15.0% |
| !!! | TAAAAAGATTGAGAAAATTT+TGG | - | chr3_3:70539001-70539020 | None:intergenic | 15.0% |
| !! | TTAATTCAAAACAATTTGAT+GGG | + | chr3_3:70539261-70539280 | Msa0468830:intron | 15.0% |
| !!! | ATATCAGTAATTTTCTAAAA+AGG | - | chr3_3:70539612-70539631 | None:intergenic | 15.0% |
| !! | TATAAATAAGTCAGAATAGA+CGG | - | chr3_3:70536727-70536746 | None:intergenic | 20.0% |
| !! | AAAGAATAAGTGGAATTAAA+AGG | - | chr3_3:70537074-70537093 | None:intergenic | 20.0% |
| !! | AGCTTCATTAGAAATAAATA+CGG | - | chr3_3:70537430-70537449 | None:intergenic | 20.0% |
| !!! | ACTTTTACTCTTATGTAAAT+AGG | + | chr3_3:70537685-70537704 | Msa0468830:intron | 20.0% |
| !!! | CTTTTACTCTTATGTAAATA+GGG | + | chr3_3:70537686-70537705 | Msa0468830:intron | 20.0% |
| !! | GAAACAGATCATAATATAAA+AGG | + | chr3_3:70537708-70537727 | Msa0468830:intron | 20.0% |
| !! | TTTGCATTACAATGAAATAA+CGG | + | chr3_3:70538021-70538040 | Msa0468830:intron | 20.0% |
| !!! | ATAATGGTTTTGCTTATTTA+AGG | + | chr3_3:70538429-70538448 | Msa0468830:intron | 20.0% |
| !!! | TAATGGTTTTGCTTATTTAA+GGG | + | chr3_3:70538430-70538449 | Msa0468830:intron | 20.0% |
| !! | GTTTGACAATGTTTAAATAA+AGG | + | chr3_3:70538510-70538529 | Msa0468830:intron | 20.0% |
| !! | TTACTTATACTTTGATGTTT+AGG | - | chr3_3:70538685-70538704 | None:intergenic | 20.0% |
| !!! | TTTTGAACGAAAAAAATACA+AGG | - | chr3_3:70538725-70538744 | None:intergenic | 20.0% |
| !! | GTAGATATATTACAACAATA+AGG | - | chr3_3:70538756-70538775 | None:intergenic | 20.0% |
| !!! | TTGTTACAATGTAATTTTAC+AGG | + | chr3_3:70539108-70539127 | Msa0468830:intron | 20.0% |
| !!! | CATCAAATTGTTTTGAATTA+AGG | - | chr3_3:70539262-70539281 | None:intergenic | 20.0% |
| !! | CTTAATTCAAAACAATTTGA+TGG | + | chr3_3:70539260-70539279 | Msa0468830:intron | 20.0% |
| !!! | CTTTTTTCTTATTCCATTTA+TGG | + | chr3_3:70539633-70539652 | Msa0468830:three_prime_UTR | 20.0% |
| !! | ATTGTATTGGTAATAATGGT+TGG | + | chr3_3:70536360-70536379 | Msa0468830:five_prime_UTR | 25.0% |
| !!! | AATTTCTTTACTGCTATTTC+AGG | + | chr3_3:70537022-70537041 | Msa0468830:intron | 25.0% |
| ! | CAAAAAAACATCAAAGTACA+CGG | - | chr3_3:70537212-70537231 | None:intergenic | 25.0% |
| ! | AAAAAAAAATGCAACTCTAC+AGG | - | chr3_3:70537235-70537254 | None:intergenic | 25.0% |
| !! | ATATCCAGCAAAATTTTGAA+AGG | - | chr3_3:70537287-70537306 | None:intergenic | 25.0% |
| !! | AGTATGAAAAAGTATACCAA+CGG | - | chr3_3:70537656-70537675 | None:intergenic | 25.0% |
| ! | AGTATCTTAGATTATCTCTT+GGG | - | chr3_3:70537753-70537772 | None:intergenic | 25.0% |
| ! | AAATTCATGACAATATCTCA+TGG | + | chr3_3:70537927-70537946 | Msa0468830:CDS | 25.0% |
| ! | CAAAACTAAAAGAAGAAATC+TGG | - | chr3_3:70537966-70537985 | None:intergenic | 25.0% |
| !!! | CAGATTTCTTCTTTTAGTTT+TGG | + | chr3_3:70537964-70537983 | Msa0468830:CDS | 25.0% |
| !! | CTTATGTTGTCTTCTTTTAA+AGG | + | chr3_3:70538114-70538133 | Msa0468830:intron | 25.0% |
| ! | GCATACATTTATGAGAATAA+TGG | + | chr3_3:70538413-70538432 | Msa0468830:intron | 25.0% |
| !!! | TTTTGAAATCTTATTCCACA+GGG | + | chr3_3:70538643-70538662 | Msa0468830:intron | 25.0% |
| !!! | TGGTTTTACAATTTTGGTAA+TGG | - | chr3_3:70538981-70539000 | None:intergenic | 25.0% |
| !!! | ATTTTCTAAAAAGGTAACTC+TGG | - | chr3_3:70539603-70539622 | None:intergenic | 25.0% |
| !! | AAAGTATCTTGAAAAGTGTA+GGG | - | chr3_3:70539820-70539839 | None:intergenic | 25.0% |
| !! | TAAAGTATCTTGAAAAGTGT+AGG | - | chr3_3:70539821-70539840 | None:intergenic | 25.0% |
| CAACCTTCTTCTATCAATTA+TGG | + | chr3_3:70536496-70536515 | Msa0468830:exon | 30.0% | |
| CTACCATAATTGATAGAAGA+AGG | - | chr3_3:70536502-70536521 | None:intergenic | 30.0% | |
| TCAAATTTGAAAAGAGCCAT+TGG | + | chr3_3:70536662-70536681 | Msa0468830:CDS | 30.0% | |
| TTCGTGTTTATTTCCAGTTT+GGG | + | chr3_3:70536796-70536815 | Msa0468830:intron | 30.0% | |
| GGTGAGTACAAAAATAAAAC+TGG | - | chr3_3:70536943-70536962 | None:intergenic | 30.0% | |
| GTAACACAAACAAAAGCAAA+AGG | - | chr3_3:70537148-70537167 | None:intergenic | 30.0% | |
| TTAGTATTTGCAACATCTTG+TGG | + | chr3_3:70537362-70537381 | Msa0468830:intron | 30.0% | |
| TTAGAAATAAATACGGCAAC+AGG | - | chr3_3:70537423-70537442 | None:intergenic | 30.0% | |
| ! | AAAAAGTATACCAACGGATA+CGG | - | chr3_3:70537650-70537669 | None:intergenic | 30.0% |
| GAGTATCTTAGATTATCTCT+TGG | - | chr3_3:70537754-70537773 | None:intergenic | 30.0% | |
| GAGCAAAGGTTAAATTATTG+AGG | - | chr3_3:70537863-70537882 | None:intergenic | 30.0% | |
| ATTTGTTCTGTCAGTTGTAT+GGG | + | chr3_3:70537883-70537902 | Msa0468830:intron | 30.0% | |
| TTCTCTTGAACAAGAAATTC+AGG | + | chr3_3:70538326-70538345 | Msa0468830:CDS | 30.0% | |
| ! | AAATTCAGGCAGTCTTTTAT+GGG | + | chr3_3:70538340-70538359 | Msa0468830:CDS | 30.0% |
| CAACATATTGAGTCAACAAA+AGG | - | chr3_3:70538387-70538406 | None:intergenic | 30.0% | |
| !!! | CTTTTGTTGACTCAATATGT+TGG | + | chr3_3:70538385-70538404 | Msa0468830:intron | 30.0% |
| AGTGATTAAATGTCAGTGTA+AGG | - | chr3_3:70538481-70538500 | None:intergenic | 30.0% | |
| ! | TATGTAACTCTTTGTTGTGT+TGG | + | chr3_3:70538536-70538555 | Msa0468830:intron | 30.0% |
| !!! | CTTTTGAAATCTTATTCCAC+AGG | + | chr3_3:70538642-70538661 | Msa0468830:intron | 30.0% |
| GTAATATATCTACAGTTGCT+TGG | + | chr3_3:70538763-70538782 | Msa0468830:intron | 30.0% | |
| ! | AAGTTTTTCTTCCAACTGTA+GGG | + | chr3_3:70539068-70539087 | Msa0468830:intron | 30.0% |
| !! | ACCAGGCTAATTTTAATCAA+GGG | - | chr3_3:70539290-70539309 | None:intergenic | 30.0% |
| !! | AACCAGGCTAATTTTAATCA+AGG | - | chr3_3:70539291-70539310 | None:intergenic | 30.0% |
| GAATGTGATATGAGATGTAA+CGG | + | chr3_3:70539413-70539432 | Msa0468830:CDS | 30.0% | |
| TTGTTAACATCTGTATAGTC+AGG | + | chr3_3:70539730-70539749 | Msa0468830:three_prime_UTR | 30.0% | |
| AGATACTTTAACCACTTCTT+AGG | + | chr3_3:70539831-70539850 | Msa0468830:three_prime_UTR | 30.0% | |
| !!! | AGAGTTTTAAGCATACATAC+AGG | + | chr3_3:70539857-70539876 | Msa0468830:three_prime_UTR | 30.0% |
| TATCTTTCAGGCTTCTCATA+TGG | + | chr3_3:70536387-70536406 | Msa0468830:five_prime_UTR | 35.0% | |
| ATTTCCCTTCATAGTTCACA+AGG | + | chr3_3:70536415-70536434 | Msa0468830:five_prime_UTR | 35.0% | |
| GCTAAGCATGATAACAAACA+GGG | - | chr3_3:70536603-70536622 | None:intergenic | 35.0% | |
| AGCTAAGCATGATAACAAAC+AGG | - | chr3_3:70536604-70536623 | None:intergenic | 35.0% | |
| AATTTGAAAAGAGCCATTGG+TGG | + | chr3_3:70536665-70536684 | Msa0468830:CDS | 35.0% | |
| CTTCGTGTTTATTTCCAGTT+TGG | + | chr3_3:70536795-70536814 | Msa0468830:intron | 35.0% | |
| TCGTGTTTATTTCCAGTTTG+GGG | + | chr3_3:70536797-70536816 | Msa0468830:intron | 35.0% | |
| AGTGACTACTTGATATTCAG+TGG | + | chr3_3:70536901-70536920 | Msa0468830:intron | 35.0% | |
| CTACTTGATATTCAGTGGTT+AGG | + | chr3_3:70536906-70536925 | Msa0468830:intron | 35.0% | |
| TTAGCACTTGATAAGCAGTA+GGG | - | chr3_3:70536964-70536983 | None:intergenic | 35.0% | |
| TTTAGCACTTGATAAGCAGT+AGG | - | chr3_3:70536965-70536984 | None:intergenic | 35.0% | |
| !! | TTCTTTACTGCTATTTCAGG+AGG | + | chr3_3:70537025-70537044 | Msa0468830:intron | 35.0% |
| AAAAGGAATGATCTGATCAG+CGG | - | chr3_3:70537057-70537076 | None:intergenic | 35.0% | |
| ! | GTGTCCTTTCAAAATTTTGC+TGG | + | chr3_3:70537280-70537299 | Msa0468830:intron | 35.0% |
| GGCTTCTTTATATGGATAAC+TGG | - | chr3_3:70537466-70537485 | None:intergenic | 35.0% | |
| TGCTAAGAGGCTTCTTTATA+TGG | - | chr3_3:70537474-70537493 | None:intergenic | 35.0% | |
| ! | ATTTTCTGGATATCTCAGCT+TGG | + | chr3_3:70537834-70537853 | Msa0468830:intron | 35.0% |
| CATTTGTTCTGTCAGTTGTA+TGG | + | chr3_3:70537882-70537901 | Msa0468830:intron | 35.0% | |
| AACGGACATTGTTAGTTGAT+TGG | + | chr3_3:70538039-70538058 | Msa0468830:intron | 35.0% | |
| AGCTTATCCAATGGTTCATT+AGG | - | chr3_3:70538307-70538326 | None:intergenic | 35.0% | |
| TTCAAGAGAAGCTTATCCAA+TGG | - | chr3_3:70538316-70538335 | None:intergenic | 35.0% | |
| ! | GAAATTCAGGCAGTCTTTTA+TGG | + | chr3_3:70538339-70538358 | Msa0468830:CDS | 35.0% |
| !!! | CTTTTATGGGATTTGCTGAT+AGG | + | chr3_3:70538353-70538372 | Msa0468830:CDS | 35.0% |
| TTGACTCAATATGTTGGCAT+TGG | + | chr3_3:70538391-70538410 | Msa0468830:intron | 35.0% | |
| ! | TTGTGATTGGTTGTTTACTC+TGG | + | chr3_3:70538563-70538582 | Msa0468830:intron | 35.0% |
| TGAGAAGAATCTATATGGCA+AGG | + | chr3_3:70538852-70538871 | Msa0468830:CDS | 35.0% | |
| ! | ATTGAGAAGTACATAGTTGC+AGG | + | chr3_3:70538881-70538900 | Msa0468830:CDS | 35.0% |
| AACAAGGGAAAGGATGAAAA+AGG | - | chr3_3:70538934-70538953 | None:intergenic | 35.0% | |
| ! | CAAGTTTTTCTTCCAACTGT+AGG | + | chr3_3:70539067-70539086 | Msa0468830:intron | 35.0% |
| ! | TAATTTTACAGGTGCAGCTA+TGG | + | chr3_3:70539119-70539138 | Msa0468830:intron | 35.0% |
| TCCCTTGATTAAAATTAGCC+TGG | + | chr3_3:70539286-70539305 | Msa0468830:intron | 35.0% | |
| ! | GATTAAAATTAGCCTGGTTG+TGG | + | chr3_3:70539292-70539311 | Msa0468830:intron | 35.0% |
| AAAACTATACATCCACAACC+AGG | - | chr3_3:70539307-70539326 | None:intergenic | 35.0% | |
| ! | TAATCTTTTGCCAAGTTCTG+GGG | - | chr3_3:70539359-70539378 | None:intergenic | 35.0% |
| ! | GTAATCTTTTGCCAAGTTCT+GGG | - | chr3_3:70539360-70539379 | None:intergenic | 35.0% |
| ! | AGTAATCTTTTGCCAAGTTC+TGG | - | chr3_3:70539361-70539380 | None:intergenic | 35.0% |
| AGAACTTGGCAAAAGATTAC+TGG | + | chr3_3:70539360-70539379 | Msa0468830:intron | 35.0% | |
| AGAAGATGATCATGGTGAAA+AGG | - | chr3_3:70539509-70539528 | None:intergenic | 35.0% | |
| AGTTCTTCAGAAGATGATCA+TGG | - | chr3_3:70539517-70539536 | None:intergenic | 35.0% | |
| CTAAAAAGGTAACTCTGGTT+TGG | - | chr3_3:70539598-70539617 | None:intergenic | 35.0% | |
| TTGTGGACACTAACCATAAA+TGG | - | chr3_3:70539649-70539668 | None:intergenic | 35.0% | |
| ATGTAGGAAGGAAGACAAAA+AGG | + | chr3_3:70539681-70539700 | Msa0468830:three_prime_UTR | 35.0% | |
| TGTAGGAAGGAAGACAAAAA+GGG | + | chr3_3:70539682-70539701 | Msa0468830:three_prime_UTR | 35.0% | |
| GCTAGTATCATGTACATCTT+GGG | + | chr3_3:70539752-70539771 | Msa0468830:three_prime_UTR | 35.0% | |
| AAAACTCTAGACCTAAGAAG+TGG | - | chr3_3:70539845-70539864 | None:intergenic | 35.0% | |
| AATTAAAGGCGGTCATACAA+AGG | - | chr3_3:70539929-70539948 | None:intergenic | 35.0% | |
| !! | ATGGTTGGCTTCTATCTTTC+AGG | + | chr3_3:70536375-70536394 | Msa0468830:five_prime_UTR | 40.0% |
| GGAACCTTGTGAACTATGAA+GGG | - | chr3_3:70536422-70536441 | None:intergenic | 40.0% | |
| AGGAACCTTGTGAACTATGA+AGG | - | chr3_3:70536423-70536442 | None:intergenic | 40.0% | |
| CTGGCAACAACTTGAATTAC+AGG | - | chr3_3:70536473-70536492 | None:intergenic | 40.0% | |
| TGATAGAAGAAGGTTGAAGC+TGG | - | chr3_3:70536492-70536511 | None:intergenic | 40.0% | |
| TCAGAATAGACGGCATAAGA+AGG | - | chr3_3:70536717-70536736 | None:intergenic | 40.0% | |
| ! | TTATTTCCAGTTTGGGGTGA+AGG | + | chr3_3:70536803-70536822 | Msa0468830:intron | 40.0% |
| ! | TTCCACTTATTCTTTTGCCC+TGG | + | chr3_3:70537079-70537098 | Msa0468830:CDS | 40.0% |
| ATCCAGGGCAAAAGAATAAG+TGG | - | chr3_3:70537084-70537103 | None:intergenic | 40.0% | |
| ! | ATTCTTTTGCCCTGGATTGT+AGG | + | chr3_3:70537087-70537106 | Msa0468830:CDS | 40.0% |
| AAATACGGCAACAGGCAAAA+GGG | - | chr3_3:70537415-70537434 | None:intergenic | 40.0% | |
| TAAATACGGCAACAGGCAAA+AGG | - | chr3_3:70537416-70537435 | None:intergenic | 40.0% | |
| ATGAAGGCAAACAACTGGTA+TGG | - | chr3_3:70537524-70537543 | None:intergenic | 40.0% | |
| AACACATGAAGGCAAACAAC+TGG | - | chr3_3:70537529-70537548 | None:intergenic | 40.0% | |
| TGGCAACATACAACACATGA+AGG | - | chr3_3:70537540-70537559 | None:intergenic | 40.0% | |
| ! | TGTGTTGTATGTTGCCACTT+TGG | + | chr3_3:70537543-70537562 | Msa0468830:CDS | 40.0% |
| !! | TTGTATGTTGCCACTTTGGT+TGG | + | chr3_3:70537547-70537566 | Msa0468830:CDS | 40.0% |
| !! | TGTATGTTGCCACTTTGGTT+GGG | + | chr3_3:70537548-70537567 | Msa0468830:CDS | 40.0% |
| CTGTGCATCATATAGAGTTC+AGG | + | chr3_3:70537581-70537600 | Msa0468830:CDS | 40.0% | |
| CTGACAGAACAAATGAGCAA+AGG | - | chr3_3:70537877-70537896 | None:intergenic | 40.0% | |
| AAAGGCTAGCATACTTGTGT+TGG | + | chr3_3:70538132-70538151 | Msa0468830:intron | 40.0% | |
| ATCCAGAGAATTTCGCACAA+TGG | + | chr3_3:70538216-70538235 | Msa0468830:CDS | 40.0% | |
| TCCAGAGAATTTCGCACAAT+GGG | + | chr3_3:70538217-70538236 | Msa0468830:CDS | 40.0% | |
| TGTGATAATACCCCACTATC+AGG | - | chr3_3:70538259-70538278 | None:intergenic | 40.0% | |
| ! | ACAAAGTGAACCGATTTCGA+GGG | + | chr3_3:70538276-70538295 | Msa0468830:CDS | 40.0% |
| TTAGGATCTACCCTCGAAAT+CGG | - | chr3_3:70538289-70538308 | None:intergenic | 40.0% | |
| GGTAGATCCTAATGAACCAT+TGG | + | chr3_3:70538297-70538316 | Msa0468830:CDS | 40.0% | |
| AATCTTATTCCACAGGGTCT+TGG | + | chr3_3:70538649-70538668 | Msa0468830:intron | 40.0% | |
| TATATCTACAGTTGCTTGGC+TGG | + | chr3_3:70538767-70538786 | Msa0468830:intron | 40.0% | |
| ATATCTACAGTTGCTTGGCT+GGG | + | chr3_3:70538768-70538787 | Msa0468830:intron | 40.0% | |
| CTGCGTGAGAAGAATCTATA+TGG | + | chr3_3:70538847-70538866 | Msa0468830:CDS | 40.0% | |
| ! | AGAAGTACATAGTTGCAGGT+TGG | + | chr3_3:70538885-70538904 | Msa0468830:intron | 40.0% |
| AGTCTCATAGAGGAGAACAA+GGG | - | chr3_3:70538949-70538968 | None:intergenic | 40.0% | |
| AAGTCTCATAGAGGAGAACA+AGG | - | chr3_3:70538950-70538969 | None:intergenic | 40.0% | |
| GCAAAAGCAAAGTCTCATAG+AGG | - | chr3_3:70538959-70538978 | None:intergenic | 40.0% | |
| CATCTCTCATAGAAGCAAAC+AGG | + | chr3_3:70539149-70539168 | Msa0468830:CDS | 40.0% | |
| GATCGTGCACTTGATGAAAA+CGG | + | chr3_3:70539230-70539249 | Msa0468830:CDS | 40.0% | |
| AATCTTCTTCCTGAAGTTCC+AGG | + | chr3_3:70539388-70539407 | Msa0468830:CDS | 40.0% | |
| ATCTCATATCACATTCCTCC+TGG | - | chr3_3:70539409-70539428 | None:intergenic | 40.0% | |
| ! | CTTCTGAAGAACTCAGAATG+TGG | + | chr3_3:70539524-70539543 | Msa0468830:CDS | 40.0% |
| !! | AATGATACCGACTCATGACT+TGG | + | chr3_3:70539548-70539567 | Msa0468830:exon | 40.0% |
| GGCTAGTATCATGTACATCT+TGG | + | chr3_3:70539751-70539770 | Msa0468830:three_prime_UTR | 40.0% | |
| CACAAGGTTCCTCGTACTAA+AGG | + | chr3_3:70536431-70536450 | Msa0468830:five_prime_UTR | 45.0% | |
| AAACCACTGCCTTTAGTACG+AGG | - | chr3_3:70536443-70536462 | None:intergenic | 45.0% | |
| GTACTAAAGGCAGTGGTTTC+TGG | + | chr3_3:70536444-70536463 | Msa0468830:five_prime_UTR | 45.0% | |
| TGTAACATGACTGCCACCAA+TGG | - | chr3_3:70536681-70536700 | None:intergenic | 45.0% | |
| GTGGCAGTCATGTTACATGT+GGG | + | chr3_3:70536684-70536703 | Msa0468830:CDS | 45.0% | |
| AACAGCAAACCAAACCCTAG+TGG | - | chr3_3:70536830-70536849 | None:intergenic | 45.0% | |
| TTCAGCGCACAATTGACAAG+TGG | - | chr3_3:70536999-70537018 | None:intergenic | 45.0% | |
| AATACGGCAACAGGCAAAAG+GGG | - | chr3_3:70537414-70537433 | None:intergenic | 45.0% | |
| !! | GTATGTTGCCACTTTGGTTG+GGG | + | chr3_3:70537549-70537568 | Msa0468830:CDS | 45.0% |
| TTGATGAACTCAGAGACCTC+TGG | + | chr3_3:70537605-70537624 | Msa0468830:CDS | 45.0% | |
| ATACAAGTATTCCTCGCCAG+AGG | - | chr3_3:70537624-70537643 | None:intergenic | 45.0% | |
| CTTGTATCATCCGTATCCGT+TGG | + | chr3_3:70537637-70537656 | Msa0468830:CDS | 45.0% | |
| TTCTGGATATCTCAGCTTGG+TGG | + | chr3_3:70537837-70537856 | Msa0468830:intron | 45.0% | |
| CTTTGGGCATACCTGATAGT+GGG | + | chr3_3:70538245-70538264 | Msa0468830:CDS | 45.0% | |
| ! | TTTGGGCATACCTGATAGTG+GGG | + | chr3_3:70538246-70538265 | Msa0468830:CDS | 45.0% |
| ! | CACAAAGTGAACCGATTTCG+AGG | + | chr3_3:70538275-70538294 | Msa0468830:CDS | 45.0% |
| ! | TTGTGTTGGCGAGTTGTGAT+TGG | + | chr3_3:70538550-70538569 | Msa0468830:intron | 45.0% |
| TATCTACAGTTGCTTGGCTG+GGG | + | chr3_3:70538769-70538788 | Msa0468830:intron | 45.0% | |
| TCTTCTCACGCAGTCATGTT+CGG | - | chr3_3:70538840-70538859 | None:intergenic | 45.0% | |
| !! | CATAGTTGCAGGTTGGTACT+TGG | + | chr3_3:70538892-70538911 | Msa0468830:intron | 45.0% |
| CATAGAGGAGAACAAGGGAA+AGG | - | chr3_3:70538944-70538963 | None:intergenic | 45.0% | |
| TACGAGCTTGAGCAAATGAC+AGG | + | chr3_3:70539437-70539456 | Msa0468830:CDS | 45.0% | |
| ACGAGCTTGAGCAAATGACA+GGG | + | chr3_3:70539438-70539457 | Msa0468830:CDS | 45.0% | |
| CAGGGTGGAATTATTCTCCA+AGG | + | chr3_3:70539456-70539475 | Msa0468830:CDS | 45.0% | |
| CCATGCACAGAACTTAACCT+TGG | - | chr3_3:70539476-70539495 | None:intergenic | 45.0% | |
| CCAAGGTTAAGTTCTGTGCA+TGG | + | chr3_3:70539473-70539492 | Msa0468830:CDS | 45.0% | |
| CCAAGTACCAAGTCATGAGT+CGG | - | chr3_3:70539558-70539577 | None:intergenic | 45.0% | |
| ATGGTTAGTGTCCACAAGTG+AGG | + | chr3_3:70539652-70539671 | Msa0468830:three_prime_UTR | 45.0% | |
| TACATACACCTCCTCACTTG+TGG | - | chr3_3:70539666-70539685 | None:intergenic | 45.0% | |
| ! | ACAAGTGAGGAGGTGTATGT+AGG | + | chr3_3:70539665-70539684 | Msa0468830:three_prime_UTR | 45.0% |
| GTCATACAAAGGACGTCGTT+AGG | - | chr3_3:70539918-70539937 | None:intergenic | 45.0% | |
| GTTCCTCGTACTAAAGGCAG+TGG | + | chr3_3:70536437-70536456 | Msa0468830:five_prime_UTR | 50.0% | |
| GGTGGCAGTCATGTTACATG+TGG | + | chr3_3:70536683-70536702 | Msa0468830:CDS | 50.0% | |
| CAGTCATGTTACATGTGGGC+AGG | + | chr3_3:70536688-70536707 | Msa0468830:CDS | 50.0% | |
| ! | TTTGGGGTGAAGGTCCACTA+GGG | + | chr3_3:70536813-70536832 | Msa0468830:CDS | 50.0% |
| GCGCACAATTGACAAGTGGA+CGG | - | chr3_3:70536995-70537014 | None:intergenic | 50.0% | |
| ATACGGCAACAGGCAAAAGG+GGG | - | chr3_3:70537413-70537432 | None:intergenic | 50.0% | |
| ATGTGGCAGCGATTGCTAAG+AGG | - | chr3_3:70537487-70537506 | None:intergenic | 50.0% | |
| TGGTCCACTGAACTGACATG+TGG | - | chr3_3:70537504-70537523 | None:intergenic | 50.0% | |
| AGCAGTTACCCCAACCAAAG+TGG | - | chr3_3:70537560-70537579 | None:intergenic | 50.0% | |
| !! | AAGCTGATTTGCGAGAGCAG+CGG | - | chr3_3:70538184-70538203 | None:intergenic | 50.0% |
| TGCTCTCGCAAATCAGCTTG+AGG | + | chr3_3:70538185-70538204 | Msa0468830:CDS | 50.0% | |
| GCCCATTGTGCGAAATTCTC+TGG | - | chr3_3:70538221-70538240 | None:intergenic | 50.0% | |
| AGAATTTCGCACAATGGGCC+AGG | + | chr3_3:70538222-70538241 | Msa0468830:CDS | 50.0% | |
| TATCAGGTATGCCCAAAGCC+TGG | - | chr3_3:70538243-70538262 | None:intergenic | 50.0% | |
| ! | GCTTTGGGCATACCTGATAG+TGG | + | chr3_3:70538244-70538263 | Msa0468830:CDS | 50.0% |
| CCAAAACATCCAAGACCCTG+TGG | - | chr3_3:70538661-70538680 | None:intergenic | 50.0% | |
| ! | CCACAGGGTCTTGGATGTTT+TGG | + | chr3_3:70538658-70538677 | Msa0468830:intron | 50.0% |
| TCTTCCAACTGTAGGGTGCA+TGG | + | chr3_3:70539075-70539094 | Msa0468830:intron | 50.0% | |
| AACACCATGCACCCTACAGT+TGG | - | chr3_3:70539082-70539101 | None:intergenic | 50.0% | |
| !!! | TCTTTTGCCAAGTTCTGGGG+AGG | - | chr3_3:70539356-70539375 | None:intergenic | 50.0% |
| CTTCTTCCTGAAGTTCCAGG+AGG | + | chr3_3:70539391-70539410 | Msa0468830:CDS | 50.0% | |
| CACATTCCTCCTGGAACTTC+AGG | - | chr3_3:70539400-70539419 | None:intergenic | 50.0% | |
| AGCTTGAGCAAATGACAGGG+TGG | + | chr3_3:70539441-70539460 | Msa0468830:CDS | 50.0% | |
| !! | CCGACTCATGACTTGGTACT+TGG | + | chr3_3:70539555-70539574 | Msa0468830:exon | 50.0% |
| GTTAGTGTCCACAAGTGAGG+AGG | + | chr3_3:70539655-70539674 | Msa0468830:three_prime_UTR | 50.0% | |
| ! | GTGAGGAGGTGTATGTAGGA+AGG | + | chr3_3:70539669-70539688 | Msa0468830:three_prime_UTR | 50.0% |
| AGTGGACCTTCACCCCAAAC+TGG | - | chr3_3:70536812-70536831 | None:intergenic | 55.0% | |
| ! | GTTTGGGGTGAAGGTCCACT+AGG | + | chr3_3:70536812-70536831 | Msa0468830:intron | 55.0% |
| GGTGAAGGTCCACTAGGGTT+TGG | + | chr3_3:70536818-70536837 | Msa0468830:CDS | 55.0% | |
| CCAGCAGCACCTACAATCCA+GGG | - | chr3_3:70537099-70537118 | None:intergenic | 55.0% | |
| ACCAGCAGCACCTACAATCC+AGG | - | chr3_3:70537100-70537119 | None:intergenic | 55.0% | |
| GCTGCCACATGTCAGTTCAG+TGG | + | chr3_3:70537497-70537516 | Msa0468830:CDS | 55.0% | |
| GAAAGAGATCAGCGCGTGCA+AGG | - | chr3_3:70539194-70539213 | None:intergenic | 55.0% | |
| !! | CCAAGTTCTGGGGAGGTGAA+TGG | - | chr3_3:70539349-70539368 | None:intergenic | 55.0% |
| CCATTCACCTCCCCAGAACT+TGG | + | chr3_3:70539346-70539365 | Msa0468830:intron | 55.0% | |
| ! | CCCTGGATTGTAGGTGCTGC+TGG | + | chr3_3:70537096-70537115 | Msa0468830:CDS | 60.0% |
| GAACTCAGAGACCTCTGGCG+AGG | + | chr3_3:70537610-70537629 | Msa0468830:CDS | 60.0% | |
| TCGCACAATGGGCCAGGCTT+TGG | + | chr3_3:70538228-70538247 | Msa0468830:CDS | 60.0% | |
| CGCACAATGGGCCAGGCTTT+GGG | + | chr3_3:70538229-70538248 | Msa0468830:CDS | 60.0% | |
| GAGATCAGCGCGTGCAAGGT+CGG | - | chr3_3:70539190-70539209 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 70536357 | 70539955 | 70536357 | ID=Msa0468830;Name=Msa0468830 |
| chr3_3 | mRNA | 70536357 | 70539955 | 70536357 | ID=Msa0468830-mRNA-1;Parent=Msa0468830;Name=Msa0468830-mRNA-1;_AED=0.12;_eAED=0.12;_QI=158|1|1|1|1|1|10|390|398 |
| chr3_3 | exon | 70536357 | 70536517 | 70536357 | ID=Msa0468830-mRNA-1:exon:17081;Parent=Msa0468830-mRNA-1 |
| chr3_3 | exon | 70536646 | 70536709 | 70536646 | ID=Msa0468830-mRNA-1:exon:17082;Parent=Msa0468830-mRNA-1 |
| chr3_3 | exon | 70536813 | 70536897 | 70536813 | ID=Msa0468830-mRNA-1:exon:17083;Parent=Msa0468830-mRNA-1 |
| chr3_3 | exon | 70537044 | 70537117 | 70537044 | ID=Msa0468830-mRNA-1:exon:17084;Parent=Msa0468830-mRNA-1 |
| chr3_3 | exon | 70537467 | 70537658 | 70537467 | ID=Msa0468830-mRNA-1:exon:17085;Parent=Msa0468830-mRNA-1 |
| chr3_3 | exon | 70537897 | 70537985 | 70537897 | ID=Msa0468830-mRNA-1:exon:17086;Parent=Msa0468830-mRNA-1 |
| chr3_3 | exon | 70538136 | 70538374 | 70538136 | ID=Msa0468830-mRNA-1:exon:17087;Parent=Msa0468830-mRNA-1 |
| chr3_3 | exon | 70538778 | 70538902 | 70538778 | ID=Msa0468830-mRNA-1:exon:17088;Parent=Msa0468830-mRNA-1 |
| chr3_3 | exon | 70539130 | 70539251 | 70539130 | ID=Msa0468830-mRNA-1:exon:17089;Parent=Msa0468830-mRNA-1 |
| chr3_3 | exon | 70539362 | 70539955 | 70539362 | ID=Msa0468830-mRNA-1:exon:17090;Parent=Msa0468830-mRNA-1 |
| chr3_3 | five_prime_UTR | 70536357 | 70536514 | 70536357 | ID=Msa0468830-mRNA-1:five_prime_utr;Parent=Msa0468830-mRNA-1 |
| chr3_3 | CDS | 70536515 | 70536517 | 70536515 | ID=Msa0468830-mRNA-1:cds;Parent=Msa0468830-mRNA-1 |
| chr3_3 | CDS | 70536646 | 70536709 | 70536646 | ID=Msa0468830-mRNA-1:cds;Parent=Msa0468830-mRNA-1 |
| chr3_3 | CDS | 70536813 | 70536897 | 70536813 | ID=Msa0468830-mRNA-1:cds;Parent=Msa0468830-mRNA-1 |
| chr3_3 | CDS | 70537044 | 70537117 | 70537044 | ID=Msa0468830-mRNA-1:cds;Parent=Msa0468830-mRNA-1 |
| chr3_3 | CDS | 70537467 | 70537658 | 70537467 | ID=Msa0468830-mRNA-1:cds;Parent=Msa0468830-mRNA-1 |
| chr3_3 | CDS | 70537897 | 70537985 | 70537897 | ID=Msa0468830-mRNA-1:cds;Parent=Msa0468830-mRNA-1 |
| chr3_3 | CDS | 70538136 | 70538374 | 70538136 | ID=Msa0468830-mRNA-1:cds;Parent=Msa0468830-mRNA-1 |
| chr3_3 | CDS | 70538778 | 70538902 | 70538778 | ID=Msa0468830-mRNA-1:cds;Parent=Msa0468830-mRNA-1 |
| chr3_3 | CDS | 70539130 | 70539251 | 70539130 | ID=Msa0468830-mRNA-1:cds;Parent=Msa0468830-mRNA-1 |
| chr3_3 | CDS | 70539362 | 70539565 | 70539362 | ID=Msa0468830-mRNA-1:cds;Parent=Msa0468830-mRNA-1 |
| chr3_3 | three_prime_UTR | 70539566 | 70539955 | 70539566 | ID=Msa0468830-mRNA-1:three_prime_utr;Parent=Msa0468830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
