Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567370 | XP_013446808.1 | 100.000 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 2.39e-151 | 428 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567370 | sp|Q9SID8|RAH1D_ARATH | 87.923 | 207 | 25 | 0 | 1 | 207 | 1 | 207 | 1.10e-136 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567370 | A0A072U4T2 | 100.000 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 1.14e-151 | 428 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0567370 | -0.805458 | 1.321821e-49 | -8.615850e-47 |
| Msa0001830 | Msa0567370 | 0.817228 | 3.677593e-52 | -8.615850e-47 |
| Msa0026630 | Msa0567370 | 0.823980 | 1.034260e-53 | -8.615850e-47 |
| Msa0043850 | Msa0567370 | 0.840422 | 8.779115e-58 | -8.615850e-47 |
| Msa0051960 | Msa0567370 | 0.845108 | 4.987401e-59 | -8.615850e-47 |
| Msa0052360 | Msa0567370 | 0.805418 | 1.347553e-49 | -8.615850e-47 |
| Msa0052780 | Msa0567370 | 0.807032 | 6.161383e-50 | -8.615850e-47 |
| Msa0061220 | Msa0567370 | 0.829845 | 4.097525e-55 | -8.615850e-47 |
| Msa0077370 | Msa0567370 | 0.844960 | 5.467641e-59 | -8.615850e-47 |
| Msa0082420 | Msa0567370 | 0.809541 | 1.798638e-50 | -8.615850e-47 |
| Msa0090380 | Msa0567370 | 0.810953 | 8.921178e-51 | -8.615850e-47 |
| Msa0090510 | Msa0567370 | 0.838770 | 2.361164e-57 | -8.615850e-47 |
| Msa0094710 | Msa0567370 | 0.809528 | 1.809875e-50 | -8.615850e-47 |
| Msa0095940 | Msa0567370 | 0.810915 | 9.090572e-51 | -8.615850e-47 |
| Msa0097370 | Msa0567370 | 0.803745 | 3.011041e-49 | -8.615850e-47 |
| Msa0097570 | Msa0567370 | 0.814815 | 1.271137e-51 | -8.615850e-47 |
| Msa0101960 | Msa0567370 | 0.851017 | 1.166867e-60 | -8.615850e-47 |
| Msa0108760 | Msa0567370 | 0.811888 | 5.587473e-51 | -8.615850e-47 |
| Msa0137860 | Msa0567370 | 0.805593 | 1.238415e-49 | -8.615850e-47 |
| Msa0137980 | Msa0567370 | 0.834743 | 2.512573e-56 | -8.615850e-47 |
| Msa0138900 | Msa0567370 | 0.817514 | 3.170266e-52 | -8.615850e-47 |
| Msa0174100 | Msa0567370 | 0.828356 | 9.409785e-55 | -8.615850e-47 |
| Msa0178720 | Msa0567370 | 0.809071 | 2.268285e-50 | -8.615850e-47 |
| Msa0183910 | Msa0567370 | 0.827003 | 1.988699e-54 | -8.615850e-47 |
| Msa0194920 | Msa0567370 | 0.813271 | 2.784758e-51 | -8.615850e-47 |
| Msa0203090 | Msa0567370 | 0.832586 | 8.684669e-56 | -8.615850e-47 |
| Msa0213540 | Msa0567370 | 0.803580 | 3.256998e-49 | -8.615850e-47 |
| Msa0220400 | Msa0567370 | -0.810844 | 9.416716e-51 | -8.615850e-47 |
| Msa0224130 | Msa0567370 | 0.814778 | 1.295659e-51 | -8.615850e-47 |
| Msa0236920 | Msa0567370 | 0.820001 | 8.637207e-53 | -8.615850e-47 |
| Msa0370580 | Msa0567370 | -0.810529 | 1.101498e-50 | -8.615850e-47 |
| Msa0380400 | Msa0567370 | -0.809393 | 1.934540e-50 | -8.615850e-47 |
| Msa0383870 | Msa0567370 | -0.821344 | 4.244959e-53 | -8.615850e-47 |
| Msa0389900 | Msa0567370 | 0.826925 | 2.075240e-54 | -8.615850e-47 |
| Msa0403470 | Msa0567370 | -0.824899 | 6.284030e-54 | -8.615850e-47 |
| Msa0428200 | Msa0567370 | 0.824970 | 6.048932e-54 | -8.615850e-47 |
| Msa0469170 | Msa0567370 | 0.806632 | 7.485009e-50 | -8.615850e-47 |
| Msa0264680 | Msa0567370 | 0.800725 | 1.259764e-48 | -8.615850e-47 |
| Msa0265270 | Msa0567370 | 0.812279 | 4.592872e-51 | -8.615850e-47 |
| Msa0276430 | Msa0567370 | 0.813197 | 2.891360e-51 | -8.615850e-47 |
| Msa0302730 | Msa0567370 | 0.801173 | 1.020315e-48 | -8.615850e-47 |
| Msa0316470 | Msa0567370 | 0.804777 | 1.835552e-49 | -8.615850e-47 |
| Msa0345050 | Msa0567370 | 0.802704 | 4.945064e-49 | -8.615850e-47 |
| Msa0490320 | Msa0567370 | 0.845212 | 4.676712e-59 | -8.615850e-47 |
| Msa0500610 | Msa0567370 | -0.805072 | 1.592793e-49 | -8.615850e-47 |
| Msa0500700 | Msa0567370 | -0.814261 | 1.685566e-51 | -8.615850e-47 |
| Msa0528990 | Msa0567370 | 0.853432 | 2.398848e-61 | -8.615850e-47 |
| Msa0529000 | Msa0567370 | 0.831984 | 1.223952e-55 | -8.615850e-47 |
| Msa0545020 | Msa0567370 | 0.812054 | 5.140702e-51 | -8.615850e-47 |
| Msa0545050 | Msa0567370 | 0.844315 | 8.157010e-59 | -8.615850e-47 |
| Msa0548650 | Msa0567370 | -0.824554 | 7.578473e-54 | -8.615850e-47 |
| Msa0567370 | Msa0567430 | 0.860943 | 1.451629e-63 | -8.615850e-47 |
| Msa0567370 | Msa0567480 | 0.843146 | 1.675982e-58 | -8.615850e-47 |
| Msa0567370 | Msa0567520 | 0.830259 | 3.248644e-55 | -8.615850e-47 |
| Msa0567370 | Msa0570700 | 0.809475 | 1.857833e-50 | -8.615850e-47 |
| Msa0567370 | Msa0574930 | 0.853505 | 2.286150e-61 | -8.615850e-47 |
| Msa0567370 | Msa0577490 | 0.805264 | 1.451512e-49 | -8.615850e-47 |
| Msa0567370 | Msa0592330 | 0.822224 | 2.655853e-53 | -8.615850e-47 |
| Msa0567370 | Msa0600590 | 0.854314 | 1.336959e-61 | -8.615850e-47 |
| Msa0567370 | Msa0610830 | 0.821552 | 3.800942e-53 | -8.615850e-47 |
| Msa0567370 | Msa0611060 | 0.806658 | 7.393242e-50 | -8.615850e-47 |
| Msa0567370 | Msa0613420 | 0.833641 | 4.746507e-56 | -8.615850e-47 |
| Msa0567370 | Msa0619310 | 0.800489 | 1.407079e-48 | -8.615850e-47 |
| Msa0567370 | Msa0626920 | 0.802630 | 5.122150e-49 | -8.615850e-47 |
| Msa0567370 | Msa0636320 | 0.808127 | 3.607141e-50 | -8.615850e-47 |
| Msa0567370 | Msa0641130 | 0.845063 | 5.130715e-59 | -8.615850e-47 |
| Msa0567370 | Msa0698450 | 0.808377 | 3.191861e-50 | -8.615850e-47 |
| Msa0567370 | Msa0698460 | 0.806839 | 6.767758e-50 | -8.615850e-47 |
| Msa0567370 | Msa0703810 | 0.928708 | 1.969830e-92 | -8.615850e-47 |
| Msa0567370 | Msa0713060 | 0.805549 | 1.265026e-49 | -8.615850e-47 |
| Msa0567370 | Msa0719730 | 0.807123 | 5.894115e-50 | -8.615850e-47 |
| Msa0567370 | Msa0744640 | 0.870585 | 1.306043e-66 | -8.615850e-47 |
| Msa0567370 | Msa0787790 | 0.840632 | 7.734156e-58 | -8.615850e-47 |
| Msa0567370 | Msa0824930 | 0.812094 | 5.039431e-51 | -8.615850e-47 |
| Msa0567370 | Msa0833270 | 0.823157 | 1.611020e-53 | -8.615850e-47 |
| Msa0567370 | Msa0841730 | 0.869503 | 2.948256e-66 | -8.615850e-47 |
| Msa0567370 | Msa0862620 | 0.800803 | 1.214158e-48 | -8.615850e-47 |
| Msa0567370 | Msa0863990 | 0.829958 | 3.846053e-55 | -8.615850e-47 |
| Msa0567370 | Msa0870510 | 0.850192 | 1.990938e-60 | -8.615850e-47 |
| Msa0567370 | Msa0905570 | 0.810681 | 1.021153e-50 | -8.615850e-47 |
| Msa0567370 | Msa0930740 | 0.825970 | 3.505542e-54 | -8.615850e-47 |
| Msa0567370 | Msa0945130 | 0.816621 | 5.031016e-52 | -8.615850e-47 |
| Msa0567370 | Msa0968470 | -0.812689 | 3.735462e-51 | -8.615850e-47 |
| Msa0567370 | Msa1011250 | 0.812960 | 3.258659e-51 | -8.615850e-47 |
| Msa0567370 | Msa1016960 | 0.821761 | 3.399233e-53 | -8.615850e-47 |
| Msa0567370 | Msa1022030 | 0.825042 | 5.816202e-54 | -8.615850e-47 |
| Msa0567370 | Msa1031460 | 0.836267 | 1.034424e-56 | -8.615850e-47 |
| Msa0567370 | Msa1058200 | 0.832772 | 7.813006e-56 | -8.615850e-47 |
| Msa0567370 | Msa1062040 | 0.849246 | 3.656801e-60 | -8.615850e-47 |
| Msa0567370 | Msa1070540 | 0.845222 | 4.646055e-59 | -8.615850e-47 |
| Msa0567370 | Msa1082520 | 0.828827 | 7.241441e-55 | -8.615850e-47 |
| Msa0567370 | Msa1082600 | 0.811279 | 7.581116e-51 | -8.615850e-47 |
| Msa0567370 | Msa1089190 | 0.811536 | 6.667106e-51 | -8.615850e-47 |
| Msa0567370 | Msa1101240 | 0.846267 | 2.418259e-59 | -8.615850e-47 |
| Msa0567370 | Msa1107200 | 0.830211 | 3.336602e-55 | -8.615850e-47 |
| Msa0567370 | Msa1109810 | 0.804339 | 2.265464e-49 | -8.615850e-47 |
| Msa0567370 | Msa1150780 | 0.824885 | 6.333966e-54 | -8.615850e-47 |
| Msa0567370 | Msa1159170 | 0.823928 | 1.063414e-53 | -8.615850e-47 |
| Msa0567370 | Msa1165430 | 0.817718 | 2.852283e-52 | -8.615850e-47 |
| Msa0567370 | Msa1173150 | 0.807379 | 5.201388e-50 | -8.615850e-47 |
| Msa0567370 | Msa1208450 | -0.800612 | 1.328425e-48 | -8.615850e-47 |
| Msa0567370 | Msa1208990 | 0.811391 | 7.168056e-51 | -8.615850e-47 |
| Msa0567370 | Msa1218160 | 0.815995 | 6.945650e-52 | -8.615850e-47 |
| Msa0567370 | Msa1231710 | 0.809008 | 2.339819e-50 | -8.615850e-47 |
| Msa0567370 | Msa1236440 | 0.807194 | 5.693801e-50 | -8.615850e-47 |
| Msa0567370 | Msa1238600 | 0.831836 | 1.331966e-55 | -8.615850e-47 |
| Msa0567370 | Msa1246780 | 0.803573 | 3.268526e-49 | -8.615850e-47 |
| Msa0567370 | Msa1252000 | 0.803252 | 3.809161e-49 | -8.615850e-47 |
| Msa0567370 | Msa1252810 | 0.811275 | 7.594472e-51 | -8.615850e-47 |
| Msa0567370 | Msa1256060 | 0.815928 | 7.190927e-52 | -8.615850e-47 |
| Msa0567370 | Msa1259860 | 0.800542 | 1.372862e-48 | -8.615850e-47 |
| Msa0567370 | Msa1277670 | 0.809815 | 1.570104e-50 | -8.615850e-47 |
| Msa0567370 | Msa1296240 | 0.816817 | 4.547957e-52 | -8.615850e-47 |
| Msa0567370 | Msa1298390 | -0.810093 | 1.367738e-50 | -8.615850e-47 |
| Msa0567370 | Msa1306830 | 0.807486 | 4.936915e-50 | -8.615850e-47 |
| Msa0567370 | Msa1312440 | 0.814395 | 1.574856e-51 | -8.615850e-47 |
| Msa0567370 | Msa1355510 | 0.800194 | 1.615534e-48 | -8.615850e-47 |
| Msa0567370 | Msa1364080 | 0.813985 | 1.939228e-51 | -8.615850e-47 |
| Msa0567370 | Msa1369920 | -0.801879 | 7.311770e-49 | -8.615850e-47 |
| Msa0567370 | Msa1375610 | -0.823466 | 1.364327e-53 | -8.615850e-47 |
| Msa0567370 | Msa1376550 | -0.805869 | 1.083863e-49 | -8.615850e-47 |
| Msa0567370 | Msa1379020 | 0.814894 | 1.221041e-51 | -8.615850e-47 |
| Msa0567370 | Msa1386890 | 0.804424 | 2.174685e-49 | -8.615850e-47 |
| Msa0567370 | Msa1400200 | 0.807673 | 4.506095e-50 | -8.615850e-47 |
| Msa0567370 | Msa1404050 | 0.814997 | 1.158566e-51 | -8.615850e-47 |
| Msa0567370 | Msa1407760 | 0.927585 | 9.577189e-92 | -8.615850e-47 |
| Msa0567370 | Msa1407880 | 0.818032 | 2.422183e-52 | -8.615850e-47 |
| Msa0567370 | Msa1418970 | 0.817198 | 3.734619e-52 | -8.615850e-47 |
| Msa0567370 | Msa1433410 | 0.819308 | 1.243110e-52 | -8.615850e-47 |
| Msa0567370 | Msa1437730 | 0.875779 | 2.354756e-68 | -8.615850e-47 |
| Msa0567370 | Msa1443620 | 0.824460 | 7.974114e-54 | -8.615850e-47 |
| Msa0567370 | Msa1465860 | 0.823675 | 1.219390e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567370 | MtrunA17_Chr8g0382221 | 100.000 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 2.19e-155 | 428 |
| Msa0567370 | MtrunA17_Chr3g0123971 | 93.720 | 207 | 12 | 1 | 1 | 207 | 1 | 206 | 7.88e-143 | 396 |
| Msa0567370 | MtrunA17_Chr5g0400131 | 84.058 | 207 | 33 | 0 | 1 | 207 | 1 | 207 | 1.02e-130 | 365 |
| Msa0567370 | MtrunA17_Chr4g0055081 | 84.541 | 207 | 31 | 1 | 1 | 207 | 1 | 206 | 2.07e-130 | 365 |
| Msa0567370 | MtrunA17_Chr1g0199331 | 47.561 | 164 | 85 | 1 | 9 | 171 | 31 | 194 | 4.94e-51 | 163 |
| Msa0567370 | MtrunA17_Chr5g0433561 | 44.099 | 161 | 90 | 0 | 11 | 171 | 12 | 172 | 2.99e-49 | 159 |
| Msa0567370 | MtrunA17_Chr3g0109721 | 43.478 | 161 | 91 | 0 | 11 | 171 | 12 | 172 | 4.05e-48 | 156 |
| Msa0567370 | MtrunA17_Chr8g0390561 | 44.720 | 161 | 89 | 0 | 11 | 171 | 11 | 171 | 5.57e-47 | 153 |
| Msa0567370 | MtrunA17_Chr8g0349711 | 44.099 | 161 | 90 | 0 | 10 | 170 | 7 | 167 | 1.91e-46 | 152 |
| Msa0567370 | MtrunA17_Chr4g0032201 | 36.408 | 206 | 118 | 3 | 10 | 206 | 13 | 214 | 2.19e-45 | 149 |
| Msa0567370 | MtrunA17_Chr2g0276931 | 39.267 | 191 | 113 | 1 | 10 | 197 | 10 | 200 | 4.42e-45 | 148 |
| Msa0567370 | MtrunA17_Chr8g0349681 | 44.720 | 161 | 89 | 0 | 10 | 170 | 176 | 336 | 1.58e-44 | 155 |
| Msa0567370 | MtrunA17_Chr8g0349681 | 41.358 | 162 | 95 | 0 | 10 | 171 | 14 | 175 | 7.00e-41 | 146 |
| Msa0567370 | MtrunA17_Chr8g0349681 | 42.857 | 161 | 92 | 0 | 10 | 170 | 385 | 545 | 9.89e-41 | 145 |
| Msa0567370 | MtrunA17_Chr8g0351861 | 38.509 | 161 | 99 | 0 | 10 | 170 | 17 | 177 | 1.48e-43 | 145 |
| Msa0567370 | MtrunA17_Chr7g0250531 | 38.000 | 200 | 114 | 2 | 10 | 206 | 9 | 201 | 2.22e-43 | 144 |
| Msa0567370 | MtrunA17_Chr2g0290891 | 38.509 | 161 | 99 | 0 | 10 | 170 | 7 | 167 | 3.09e-43 | 144 |
| Msa0567370 | MtrunA17_Chr6g0458081 | 39.130 | 161 | 98 | 0 | 10 | 170 | 7 | 167 | 4.76e-43 | 143 |
| Msa0567370 | MtrunA17_Chr4g0055651 | 37.056 | 197 | 120 | 1 | 10 | 206 | 9 | 201 | 5.87e-43 | 143 |
| Msa0567370 | MtrunA17_Chr3g0123821 | 34.848 | 198 | 113 | 2 | 10 | 207 | 17 | 198 | 1.28e-42 | 142 |
| Msa0567370 | MtrunA17_Chr3g0112681 | 34.466 | 206 | 123 | 2 | 10 | 206 | 13 | 215 | 2.41e-42 | 142 |
| Msa0567370 | MtrunA17_Chr7g0234201 | 36.139 | 202 | 124 | 2 | 10 | 207 | 14 | 214 | 2.42e-42 | 142 |
| Msa0567370 | MtrunA17_Chr2g0276941 | 39.355 | 155 | 94 | 0 | 10 | 164 | 16 | 170 | 4.63e-42 | 141 |
| Msa0567370 | MtrunA17_Chr8g0335471 | 37.313 | 201 | 115 | 3 | 10 | 206 | 9 | 202 | 5.26e-42 | 140 |
| Msa0567370 | MtrunA17_Chr8g0346421 | 41.401 | 157 | 92 | 0 | 10 | 166 | 27 | 183 | 8.34e-42 | 141 |
| Msa0567370 | MtrunA17_Chr1g0212521 | 37.879 | 198 | 119 | 3 | 11 | 205 | 17 | 213 | 1.03e-41 | 140 |
| Msa0567370 | MtrunA17_Chr1g0174281 | 33.333 | 207 | 127 | 1 | 10 | 205 | 16 | 222 | 1.13e-41 | 140 |
| Msa0567370 | MtrunA17_Chr8g0381841 | 38.961 | 154 | 94 | 0 | 10 | 163 | 18 | 171 | 1.30e-41 | 140 |
| Msa0567370 | MtrunA17_Chr7g0231131 | 34.715 | 193 | 112 | 1 | 10 | 202 | 16 | 194 | 1.93e-41 | 140 |
| Msa0567370 | MtrunA17_Chr4g0030911 | 38.191 | 199 | 117 | 4 | 11 | 205 | 17 | 213 | 2.18e-41 | 139 |
| Msa0567370 | MtrunA17_Chr1g0182321 | 38.071 | 197 | 113 | 3 | 11 | 206 | 17 | 205 | 4.05e-41 | 139 |
| Msa0567370 | MtrunA17_Chr7g0214241 | 34.975 | 203 | 127 | 2 | 10 | 207 | 16 | 218 | 4.93e-41 | 139 |
| Msa0567370 | MtrunA17_Chr6g0482721 | 37.288 | 177 | 109 | 1 | 10 | 186 | 13 | 187 | 6.10e-41 | 138 |
| Msa0567370 | MtrunA17_Chr1g0182301 | 38.071 | 197 | 113 | 3 | 11 | 206 | 17 | 205 | 7.33e-41 | 138 |
| Msa0567370 | MtrunA17_Chr7g0263071 | 43.038 | 158 | 89 | 1 | 11 | 167 | 17 | 174 | 8.16e-41 | 138 |
| Msa0567370 | MtrunA17_Chr7g0275991 | 38.182 | 165 | 98 | 1 | 6 | 166 | 13 | 177 | 2.05e-40 | 137 |
| Msa0567370 | MtrunA17_Chr4g0046261 | 36.306 | 157 | 100 | 0 | 10 | 166 | 14 | 170 | 8.09e-40 | 135 |
| Msa0567370 | MtrunA17_Chr1g0189361 | 38.217 | 157 | 97 | 0 | 10 | 166 | 15 | 171 | 8.42e-40 | 135 |
| Msa0567370 | MtrunA17_Chr2g0315551 | 35.669 | 157 | 101 | 0 | 10 | 166 | 14 | 170 | 1.21e-39 | 135 |
| Msa0567370 | MtrunA17_Chr4g0040781 | 32.124 | 193 | 113 | 1 | 10 | 184 | 14 | 206 | 6.21e-39 | 133 |
| Msa0567370 | MtrunA17_Chr2g0283131 | 36.306 | 157 | 100 | 0 | 10 | 166 | 14 | 170 | 8.31e-39 | 133 |
| Msa0567370 | MtrunA17_Chr2g0327911 | 40.881 | 159 | 92 | 2 | 11 | 167 | 17 | 175 | 1.50e-38 | 132 |
| Msa0567370 | MtrunA17_Chr4g0034871 | 39.024 | 205 | 109 | 6 | 11 | 207 | 10 | 206 | 1.72e-38 | 132 |
| Msa0567370 | MtrunA17_Chr2g0319951 | 34.783 | 161 | 105 | 0 | 10 | 170 | 14 | 174 | 2.51e-38 | 131 |
| Msa0567370 | MtrunA17_Chr2g0325091 | 35.057 | 174 | 113 | 0 | 10 | 183 | 12 | 185 | 4.14e-38 | 131 |
| Msa0567370 | MtrunA17_Chr4g0004661 | 39.216 | 204 | 111 | 4 | 11 | 207 | 66 | 263 | 9.48e-38 | 131 |
| Msa0567370 | MtrunA17_Chr2g0331691 | 38.235 | 204 | 113 | 4 | 11 | 207 | 12 | 209 | 7.93e-37 | 127 |
| Msa0567370 | MtrunA17_Chr1g0180291 | 37.313 | 201 | 116 | 5 | 10 | 205 | 15 | 210 | 1.61e-36 | 127 |
| Msa0567370 | MtrunA17_Chr6g0466301 | 36.538 | 208 | 110 | 6 | 11 | 207 | 10 | 206 | 7.57e-36 | 125 |
| Msa0567370 | MtrunA17_Chr6g0465491 | 36.538 | 208 | 110 | 6 | 11 | 207 | 10 | 206 | 7.57e-36 | 125 |
| Msa0567370 | MtrunA17_Chr1g0201121 | 35.784 | 204 | 118 | 5 | 11 | 207 | 10 | 207 | 7.77e-36 | 125 |
| Msa0567370 | MtrunA17_Chr8g0392931 | 34.375 | 192 | 120 | 2 | 10 | 200 | 15 | 201 | 9.65e-36 | 125 |
| Msa0567370 | MtrunA17_Chr8g0383261 | 33.824 | 204 | 120 | 4 | 11 | 207 | 14 | 209 | 1.12e-35 | 124 |
| Msa0567370 | MtrunA17_Chr8g0384311 | 40.881 | 159 | 91 | 3 | 10 | 166 | 14 | 171 | 1.28e-35 | 124 |
| Msa0567370 | MtrunA17_Chr7g0265001 | 34.483 | 203 | 122 | 4 | 10 | 206 | 17 | 214 | 1.48e-34 | 122 |
| Msa0567370 | MtrunA17_Chr1g0197331 | 37.500 | 200 | 119 | 5 | 10 | 206 | 16 | 212 | 2.65e-34 | 121 |
| Msa0567370 | MtrunA17_Chr3g0130271 | 40.000 | 160 | 92 | 4 | 10 | 166 | 13 | 171 | 1.61e-32 | 116 |
| Msa0567370 | MtrunA17_Chr1g0159481 | 37.736 | 159 | 96 | 3 | 10 | 166 | 18 | 175 | 4.99e-32 | 115 |
| Msa0567370 | MtrunA17_Chr3g0138101 | 32.143 | 168 | 111 | 3 | 10 | 177 | 14 | 178 | 8.30e-24 | 94.4 |
| Msa0567370 | MtrunA17_Chr3g0138121 | 32.143 | 168 | 111 | 3 | 10 | 177 | 14 | 178 | 8.39e-24 | 94.4 |
| Msa0567370 | MtrunA17_Chr3g0138111 | 32.143 | 168 | 111 | 3 | 10 | 177 | 14 | 178 | 8.48e-24 | 94.4 |
| Msa0567370 | MtrunA17_Chr3g0117931 | 36.970 | 165 | 90 | 5 | 11 | 163 | 10 | 172 | 3.44e-23 | 92.4 |
| Msa0567370 | MtrunA17_Chr2g0325101 | 34.545 | 165 | 94 | 5 | 11 | 163 | 8 | 170 | 2.34e-21 | 87.4 |
| Msa0567370 | MtrunA17_Chr6g0486041 | 35.152 | 165 | 93 | 5 | 11 | 163 | 8 | 170 | 4.96e-21 | 86.7 |
| Msa0567370 | MtrunA17_Chr6g0466161 | 28.571 | 189 | 120 | 4 | 26 | 207 | 7 | 187 | 1.14e-20 | 85.9 |
| Msa0567370 | MtrunA17_Chr6g0465471 | 28.042 | 189 | 121 | 4 | 26 | 207 | 7 | 187 | 6.15e-20 | 84.0 |
| Msa0567370 | MtrunA17_Chr4g0037021 | 32.121 | 165 | 98 | 5 | 11 | 163 | 8 | 170 | 1.98e-19 | 82.0 |
| Msa0567370 | MtrunA17_Chr4g0046211 | 36.154 | 130 | 80 | 3 | 11 | 139 | 8 | 135 | 3.21e-19 | 80.5 |
| Msa0567370 | MtrunA17_Chr8g0371501 | 31.515 | 165 | 99 | 5 | 11 | 163 | 8 | 170 | 8.67e-19 | 80.5 |
| Msa0567370 | MtrunA17_Chr5g0405791 | 31.515 | 165 | 99 | 5 | 11 | 163 | 8 | 170 | 9.04e-19 | 80.5 |
| Msa0567370 | MtrunA17_Chr6g0466431 | 38.542 | 96 | 50 | 1 | 11 | 106 | 10 | 96 | 5.34e-18 | 75.9 |
| Msa0567370 | MtrunA17_Chr6g0465611 | 38.542 | 96 | 50 | 1 | 11 | 106 | 10 | 96 | 5.34e-18 | 75.9 |
| Msa0567370 | MtrunA17_Chr5g0443631 | 24.561 | 171 | 123 | 3 | 5 | 170 | 100 | 269 | 2.08e-13 | 67.4 |
| Msa0567370 | MtrunA17_Chr1g0178291 | 32.051 | 156 | 97 | 4 | 12 | 166 | 431 | 578 | 6.54e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567370 | AT2G22290.1 | 87.923 | 207 | 25 | 0 | 1 | 207 | 1 | 207 | 1.12e-137 | 384 |
| Msa0567370 | AT5G10260.1 | 87.923 | 207 | 25 | 0 | 1 | 207 | 1 | 207 | 1.41e-137 | 383 |
| Msa0567370 | AT2G44610.1 | 85.096 | 208 | 30 | 1 | 1 | 207 | 1 | 208 | 1.19e-131 | 369 |
| Msa0567370 | AT4G39890.1 | 78.505 | 214 | 39 | 3 | 1 | 207 | 1 | 214 | 4.25e-117 | 332 |
| Msa0567370 | AT5G64990.1 | 77.387 | 199 | 44 | 1 | 10 | 207 | 8 | 206 | 1.62e-109 | 312 |
| Msa0567370 | AT5G64990.2 | 74.757 | 206 | 44 | 2 | 10 | 207 | 8 | 213 | 9.51e-107 | 306 |
| Msa0567370 | AT3G54840.1 | 47.561 | 164 | 85 | 1 | 9 | 171 | 33 | 196 | 1.94e-50 | 162 |
| Msa0567370 | AT3G54840.3 | 47.826 | 161 | 83 | 1 | 12 | 171 | 2 | 162 | 1.36e-49 | 159 |
| Msa0567370 | AT4G19640.1 | 40.323 | 186 | 111 | 0 | 11 | 196 | 12 | 197 | 2.76e-49 | 159 |
| Msa0567370 | AT5G45130.1 | 44.099 | 161 | 90 | 0 | 11 | 171 | 12 | 172 | 3.95e-49 | 159 |
| Msa0567370 | AT3G54840.2 | 48.077 | 156 | 80 | 1 | 9 | 163 | 33 | 188 | 2.78e-48 | 157 |
| Msa0567370 | AT5G45130.2 | 41.477 | 176 | 101 | 1 | 13 | 188 | 22 | 195 | 3.97e-47 | 154 |
| Msa0567370 | AT3G11730.1 | 39.000 | 200 | 112 | 3 | 10 | 205 | 9 | 202 | 2.11e-44 | 147 |
| Msa0567370 | AT4G17170.1 | 34.483 | 203 | 126 | 2 | 10 | 205 | 7 | 209 | 2.53e-44 | 147 |
| Msa0567370 | AT4G17160.1 | 34.146 | 205 | 121 | 2 | 9 | 205 | 6 | 204 | 8.34e-44 | 145 |
| Msa0567370 | AT1G09630.1 | 40.252 | 159 | 95 | 0 | 10 | 168 | 13 | 171 | 9.56e-44 | 145 |
| Msa0567370 | AT1G07410.1 | 39.752 | 161 | 97 | 0 | 10 | 170 | 13 | 173 | 1.40e-43 | 145 |
| Msa0567370 | AT1G05810.1 | 36.634 | 202 | 124 | 2 | 10 | 207 | 13 | 214 | 2.21e-43 | 145 |
| Msa0567370 | AT2G31680.1 | 36.946 | 203 | 123 | 2 | 10 | 207 | 13 | 215 | 5.77e-43 | 144 |
| Msa0567370 | AT1G05810.2 | 36.634 | 202 | 124 | 2 | 10 | 207 | 59 | 260 | 6.69e-43 | 145 |
| Msa0567370 | AT4G35860.1 | 34.975 | 203 | 125 | 3 | 10 | 205 | 7 | 209 | 7.74e-43 | 143 |
| Msa0567370 | AT5G59150.1 | 39.490 | 157 | 95 | 0 | 10 | 166 | 13 | 169 | 1.99e-42 | 142 |
| Msa0567370 | AT5G65270.1 | 37.580 | 157 | 98 | 0 | 10 | 166 | 18 | 174 | 2.13e-42 | 142 |
| Msa0567370 | AT1G02130.1 | 37.000 | 200 | 117 | 3 | 10 | 206 | 9 | 202 | 3.06e-42 | 141 |
| Msa0567370 | AT3G46830.1 | 38.854 | 157 | 96 | 0 | 10 | 166 | 13 | 169 | 4.44e-42 | 141 |
| Msa0567370 | AT3G46830.2 | 38.854 | 157 | 96 | 0 | 10 | 166 | 13 | 169 | 4.44e-42 | 141 |
| Msa0567370 | AT3G12160.1 | 37.438 | 203 | 120 | 3 | 10 | 205 | 16 | 218 | 1.50e-41 | 140 |
| Msa0567370 | AT4G17530.1 | 36.683 | 199 | 118 | 2 | 10 | 206 | 9 | 201 | 1.73e-41 | 139 |
| Msa0567370 | AT5G47520.1 | 35.437 | 206 | 124 | 4 | 10 | 206 | 15 | 220 | 1.87e-41 | 140 |
| Msa0567370 | AT4G39990.1 | 36.025 | 161 | 103 | 0 | 10 | 170 | 18 | 178 | 1.99e-41 | 140 |
| Msa0567370 | AT3G07410.1 | 42.208 | 154 | 89 | 0 | 10 | 163 | 13 | 166 | 2.22e-41 | 140 |
| Msa0567370 | AT2G43130.1 | 35.500 | 200 | 124 | 2 | 10 | 205 | 13 | 211 | 2.32e-41 | 139 |
| Msa0567370 | AT5G47960.1 | 34.804 | 204 | 125 | 2 | 10 | 205 | 16 | 219 | 3.22e-41 | 139 |
| Msa0567370 | AT3G53610.2 | 38.579 | 197 | 112 | 3 | 11 | 206 | 17 | 205 | 3.25e-41 | 139 |
| Msa0567370 | AT3G53610.3 | 38.579 | 197 | 112 | 3 | 11 | 206 | 17 | 205 | 3.25e-41 | 139 |
| Msa0567370 | AT3G53610.1 | 38.579 | 197 | 112 | 3 | 11 | 206 | 17 | 205 | 3.25e-41 | 139 |
| Msa0567370 | AT5G47200.1 | 36.683 | 199 | 118 | 2 | 10 | 206 | 9 | 201 | 3.86e-41 | 139 |
| Msa0567370 | AT5G59840.1 | 39.286 | 196 | 109 | 4 | 11 | 204 | 17 | 204 | 4.17e-41 | 139 |
| Msa0567370 | AT3G46060.2 | 39.487 | 195 | 108 | 4 | 11 | 203 | 17 | 203 | 5.53e-41 | 139 |
| Msa0567370 | AT3G46060.3 | 39.487 | 195 | 108 | 4 | 11 | 203 | 17 | 203 | 5.53e-41 | 139 |
| Msa0567370 | AT3G46060.1 | 39.487 | 195 | 108 | 4 | 11 | 203 | 17 | 203 | 5.53e-41 | 139 |
| Msa0567370 | AT1G18200.1 | 40.909 | 154 | 91 | 0 | 10 | 163 | 14 | 167 | 8.24e-41 | 139 |
| Msa0567370 | AT5G03520.1 | 39.394 | 198 | 118 | 2 | 11 | 206 | 17 | 214 | 9.69e-41 | 138 |
| Msa0567370 | AT3G15060.1 | 36.646 | 161 | 102 | 0 | 10 | 170 | 14 | 174 | 2.41e-40 | 137 |
| Msa0567370 | AT5G60860.1 | 33.161 | 193 | 111 | 1 | 10 | 184 | 14 | 206 | 6.80e-40 | 136 |
| Msa0567370 | AT4G18430.1 | 33.163 | 196 | 113 | 1 | 10 | 187 | 14 | 209 | 9.71e-40 | 135 |
| Msa0567370 | AT1G73640.1 | 38.961 | 154 | 94 | 0 | 10 | 163 | 14 | 167 | 2.04e-39 | 135 |
| Msa0567370 | AT3G18820.1 | 39.512 | 205 | 108 | 6 | 11 | 207 | 10 | 206 | 6.56e-39 | 133 |
| Msa0567370 | AT1G28550.1 | 37.580 | 157 | 98 | 0 | 10 | 166 | 14 | 170 | 7.03e-39 | 133 |
| Msa0567370 | AT1G16920.1 | 35.032 | 157 | 102 | 0 | 10 | 166 | 14 | 170 | 1.04e-38 | 133 |
| Msa0567370 | AT4G19640.2 | 44.444 | 126 | 70 | 0 | 11 | 136 | 12 | 137 | 2.82e-38 | 129 |
| Msa0567370 | AT3G09900.1 | 39.409 | 203 | 113 | 3 | 11 | 206 | 17 | 216 | 4.63e-38 | 131 |
| Msa0567370 | AT1G52280.1 | 39.216 | 204 | 110 | 4 | 11 | 207 | 10 | 206 | 4.67e-38 | 131 |
| Msa0567370 | AT1G01200.1 | 35.714 | 210 | 122 | 5 | 10 | 207 | 29 | 237 | 5.31e-38 | 132 |
| Msa0567370 | AT5G45750.1 | 31.579 | 209 | 124 | 5 | 10 | 206 | 14 | 215 | 1.16e-37 | 130 |
| Msa0567370 | AT1G06400.1 | 36.306 | 157 | 100 | 0 | 10 | 166 | 14 | 170 | 1.35e-37 | 130 |
| Msa0567370 | AT4G19640.3 | 43.066 | 137 | 74 | 1 | 11 | 147 | 12 | 144 | 1.63e-37 | 129 |
| Msa0567370 | AT2G33870.1 | 36.306 | 157 | 100 | 0 | 10 | 166 | 14 | 170 | 6.84e-37 | 128 |
| Msa0567370 | AT3G16100.1 | 39.216 | 204 | 110 | 4 | 11 | 207 | 10 | 206 | 2.08e-36 | 127 |
| Msa0567370 | AT4G18800.1 | 34.591 | 159 | 100 | 2 | 10 | 166 | 14 | 170 | 6.15e-36 | 125 |
| Msa0567370 | AT2G21880.1 | 36.967 | 211 | 110 | 6 | 11 | 207 | 11 | 212 | 7.16e-36 | 125 |
| Msa0567370 | AT4G09720.1 | 36.765 | 204 | 115 | 6 | 11 | 207 | 10 | 206 | 2.66e-35 | 124 |
| Msa0567370 | AT1G22740.1 | 35.784 | 204 | 114 | 6 | 11 | 207 | 10 | 203 | 5.75e-35 | 123 |
| Msa0567370 | AT1G49300.2 | 37.561 | 205 | 112 | 6 | 11 | 207 | 10 | 206 | 6.79e-35 | 123 |
| Msa0567370 | AT1G49300.1 | 37.561 | 205 | 112 | 6 | 11 | 207 | 10 | 206 | 6.79e-35 | 123 |
| Msa0567370 | AT5G03530.2 | 36.453 | 203 | 117 | 7 | 10 | 206 | 14 | 210 | 9.54e-34 | 120 |
| Msa0567370 | AT5G03530.1 | 36.453 | 203 | 117 | 7 | 10 | 206 | 14 | 210 | 9.54e-34 | 120 |
| Msa0567370 | AT1G43890.3 | 38.953 | 172 | 100 | 4 | 10 | 179 | 14 | 182 | 1.45e-33 | 119 |
| Msa0567370 | AT1G43890.1 | 38.953 | 172 | 100 | 4 | 10 | 179 | 14 | 182 | 1.45e-33 | 119 |
| Msa0567370 | AT1G43890.2 | 38.953 | 172 | 100 | 4 | 10 | 179 | 14 | 182 | 1.45e-33 | 119 |
| Msa0567370 | AT4G09720.4 | 34.450 | 209 | 118 | 5 | 11 | 207 | 10 | 211 | 2.57e-33 | 119 |
| Msa0567370 | AT5G03520.2 | 38.182 | 165 | 100 | 2 | 44 | 206 | 40 | 204 | 6.69e-33 | 117 |
| Msa0567370 | AT4G09720.3 | 34.419 | 215 | 116 | 6 | 11 | 207 | 10 | 217 | 9.87e-33 | 117 |
| Msa0567370 | AT4G35860.2 | 35.802 | 162 | 93 | 3 | 53 | 205 | 4 | 163 | 3.00e-32 | 115 |
| Msa0567370 | AT5G39620.1 | 34.783 | 207 | 120 | 5 | 9 | 207 | 5 | 204 | 2.12e-31 | 114 |
| Msa0567370 | AT3G09910.3 | 37.688 | 199 | 114 | 6 | 10 | 206 | 14 | 204 | 6.70e-31 | 112 |
| Msa0567370 | AT3G09910.1 | 37.688 | 199 | 114 | 6 | 10 | 206 | 14 | 204 | 6.70e-31 | 112 |
| Msa0567370 | AT3G09910.2 | 37.688 | 199 | 114 | 6 | 10 | 206 | 14 | 204 | 6.70e-31 | 112 |
| Msa0567370 | AT3G09910.5 | 39.375 | 160 | 94 | 3 | 10 | 167 | 14 | 172 | 5.14e-30 | 110 |
| Msa0567370 | AT3G09910.4 | 39.375 | 160 | 94 | 3 | 10 | 167 | 14 | 172 | 5.14e-30 | 110 |
| Msa0567370 | AT2G21880.4 | 35.204 | 196 | 104 | 6 | 26 | 207 | 1 | 187 | 7.39e-29 | 107 |
| Msa0567370 | AT2G21880.3 | 35.204 | 196 | 104 | 6 | 26 | 207 | 1 | 187 | 7.39e-29 | 107 |
| Msa0567370 | AT5G59150.2 | 39.474 | 114 | 69 | 0 | 53 | 166 | 5 | 118 | 7.16e-28 | 103 |
| Msa0567370 | AT2G21880.2 | 33.649 | 211 | 109 | 7 | 11 | 207 | 11 | 204 | 2.27e-26 | 100 |
| Msa0567370 | AT4G09720.6 | 36.158 | 177 | 99 | 6 | 38 | 207 | 3 | 172 | 3.16e-26 | 99.8 |
| Msa0567370 | AT4G09720.5 | 36.158 | 177 | 99 | 6 | 38 | 207 | 3 | 172 | 3.16e-26 | 99.8 |
| Msa0567370 | AT4G09720.2 | 36.158 | 177 | 99 | 6 | 38 | 207 | 3 | 172 | 3.16e-26 | 99.8 |
| Msa0567370 | AT5G55080.1 | 30.409 | 171 | 116 | 3 | 7 | 177 | 11 | 178 | 6.54e-25 | 97.4 |
| Msa0567370 | AT5G20010.1 | 30.729 | 192 | 126 | 4 | 10 | 201 | 14 | 198 | 1.06e-24 | 97.1 |
| Msa0567370 | AT5G20020.1 | 30.729 | 192 | 126 | 4 | 10 | 201 | 14 | 198 | 1.62e-24 | 96.7 |
| Msa0567370 | AT5G55190.1 | 32.143 | 168 | 111 | 3 | 10 | 177 | 14 | 178 | 1.33e-23 | 94.0 |
| Msa0567370 | AT2G44690.1 | 35.758 | 165 | 92 | 5 | 11 | 163 | 20 | 182 | 2.06e-23 | 93.2 |
| Msa0567370 | AT3G48040.1 | 36.970 | 165 | 90 | 5 | 11 | 163 | 10 | 172 | 2.01e-22 | 90.9 |
| Msa0567370 | AT5G62880.1 | 35.758 | 165 | 92 | 5 | 11 | 163 | 10 | 172 | 3.45e-21 | 87.8 |
| Msa0567370 | AT4G35020.1 | 33.939 | 165 | 95 | 5 | 11 | 163 | 8 | 170 | 3.60e-21 | 87.0 |
| Msa0567370 | AT4G35020.2 | 33.939 | 165 | 95 | 5 | 11 | 163 | 8 | 170 | 3.60e-21 | 87.0 |
| Msa0567370 | AT4G35020.3 | 33.939 | 165 | 95 | 5 | 11 | 163 | 8 | 170 | 3.60e-21 | 87.0 |
| Msa0567370 | AT3G48040.2 | 37.179 | 156 | 84 | 5 | 11 | 154 | 10 | 163 | 1.81e-20 | 84.7 |
| Msa0567370 | AT3G51300.1 | 33.333 | 165 | 96 | 5 | 11 | 163 | 8 | 170 | 4.49e-20 | 84.3 |
| Msa0567370 | AT1G20090.1 | 33.333 | 165 | 96 | 5 | 11 | 163 | 7 | 169 | 5.04e-20 | 84.0 |
| Msa0567370 | AT1G75840.1 | 33.333 | 165 | 96 | 5 | 11 | 163 | 8 | 170 | 5.20e-20 | 84.0 |
| Msa0567370 | AT4G35950.1 | 33.333 | 165 | 96 | 5 | 11 | 163 | 8 | 170 | 1.97e-19 | 82.4 |
| Msa0567370 | AT4G28950.1 | 33.129 | 163 | 97 | 5 | 11 | 163 | 8 | 168 | 2.57e-19 | 82.4 |
| Msa0567370 | AT2G17800.2 | 33.333 | 165 | 96 | 5 | 11 | 163 | 8 | 170 | 2.62e-19 | 82.4 |
| Msa0567370 | AT2G17800.1 | 33.333 | 165 | 96 | 5 | 11 | 163 | 8 | 170 | 2.62e-19 | 82.4 |
| Msa0567370 | AT5G62880.2 | 35.897 | 156 | 86 | 5 | 11 | 154 | 10 | 163 | 3.20e-19 | 82.0 |
| Msa0567370 | AT5G45970.1 | 31.515 | 165 | 99 | 5 | 11 | 163 | 8 | 170 | 9.98e-19 | 80.9 |
| Msa0567370 | AT4G35020.4 | 35.965 | 114 | 70 | 3 | 11 | 123 | 8 | 119 | 2.68e-15 | 70.5 |
| Msa0567370 | AT4G35020.5 | 35.965 | 114 | 70 | 3 | 11 | 123 | 8 | 119 | 2.68e-15 | 70.5 |
| Msa0567370 | AT5G46025.1 | 36.782 | 87 | 54 | 1 | 85 | 170 | 20 | 106 | 2.69e-14 | 67.0 |
| Msa0567370 | AT3G51290.2 | 32.576 | 132 | 76 | 4 | 44 | 163 | 641 | 771 | 5.44e-12 | 64.7 |
| Msa0567370 | AT3G21700.3 | 23.256 | 172 | 125 | 3 | 5 | 170 | 102 | 272 | 3.63e-11 | 61.6 |
| Msa0567370 | AT5G54840.1 | 24.699 | 166 | 117 | 5 | 11 | 170 | 103 | 266 | 4.43e-11 | 61.2 |
Find 62 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAATGATCTTCAGTTAAT+TGG | 0.179000 | 4_1:+68733655 | Msa0567370:three_prime_UTR |
| TAAGAAAACGAGCTTGTATT+TGG | 0.223259 | 4_1:-68731371 | None:intergenic |
| AACCCTTTCTTCTACAAATA+AGG | 0.224029 | 4_1:+68733449 | Msa0567370:CDS |
| TGAGACTTCTAAATCTTTCT+TGG | 0.265565 | 4_1:-68732356 | None:intergenic |
| CGATCCATTTCTCTCATAAA+TGG | 0.286173 | 4_1:+68731330 | Msa0567370:exon |
| AGTCGAAAATGGCGTGTATT+TGG | 0.316103 | 4_1:+68731180 | None:intergenic |
| GAACTGTTCGTTTGCAGCTT+TGG | 0.333518 | 4_1:+68732173 | Msa0567370:CDS |
| TCCTCCCTGCTGCTCTGTAT+TGG | 0.354070 | 4_1:-68733514 | None:intergenic |
| CTTCCTTATTTGTAGAAGAA+AGG | 0.383495 | 4_1:-68733452 | None:intergenic |
| GAGGAGGTTGCTCATGTTAG+AGG | 0.391358 | 4_1:+68733532 | Msa0567370:CDS |
| AAGATTGCTTCCGCCTTGCC+AGG | 0.393556 | 4_1:+68733420 | Msa0567370:CDS |
| GATGCCAAGTCAAAAGAGTT+TGG | 0.394493 | 4_1:+68733077 | Msa0567370:CDS |
| AACGAACAGTTCTATCTTCA+AGG | 0.399142 | 4_1:-68732162 | None:intergenic |
| CATGAAGCGGGTGATGATAC+TGG | 0.410880 | 4_1:-68731416 | None:intergenic |
| GAAGAAAGGGTTTCCATCCC+TGG | 0.417515 | 4_1:-68733438 | None:intergenic |
| ATTATTGTATTCTTACATCC+AGG | 0.418547 | 4_1:-68733760 | None:intergenic |
| CAAATTCGATACCACCTATC+AGG | 0.420018 | 4_1:+68731444 | Msa0567370:CDS |
| TTCCTTATTTGTAGAAGAAA+GGG | 0.422408 | 4_1:-68733451 | None:intergenic |
| GAAGAATCTCTTATGTAGCT+TGG | 0.431932 | 4_1:-68732381 | None:intergenic |
| TGTGGGACAAATTGCGGTAA+TGG | 0.433044 | 4_1:+68733680 | Msa0567370:three_prime_UTR |
| TGCTTCCGCCTTGCCAGGGA+TGG | 0.448090 | 4_1:+68733425 | Msa0567370:CDS |
| TTCATCCAATACAGAGCAGC+AGG | 0.451660 | 4_1:+68733509 | Msa0567370:CDS |
| GTCGCCATTTATGAGAGAAA+TGG | 0.453134 | 4_1:-68731334 | None:intergenic |
| TCTTAAATGTAAAGCAAAGC+TGG | 0.459400 | 4_1:+68733615 | Msa0567370:three_prime_UTR |
| AAACTGATCTTGTCGAGAAA+AGG | 0.473751 | 4_1:+68732710 | Msa0567370:CDS |
| TTCTTAGGCGATCAATCCGT+TGG | 0.478079 | 4_1:+68731388 | Msa0567370:CDS |
| AGGCAAGTTTCTATAGAAGA+AGG | 0.486341 | 4_1:+68733053 | Msa0567370:intron |
| GATGTTATAATTGTCTTGGT+TGG | 0.487954 | 4_1:+68732682 | Msa0567370:CDS |
| TAGTGATGTTATAATTGTCT+TGG | 0.496039 | 4_1:+68732678 | Msa0567370:CDS |
| ATCGAAACCAGTGCAAAAGC+AGG | 0.513342 | 4_1:+68733110 | Msa0567370:CDS |
| TTTGTTATACAATTAGTCCC+TGG | 0.518774 | 4_1:+68733742 | Msa0567370:three_prime_UTR |
| AATGAAGAATTGAACCTGAT+AGG | 0.522083 | 4_1:-68731458 | None:intergenic |
| AATACAGAGCAGCAGGGAGG+AGG | 0.528419 | 4_1:+68733516 | Msa0567370:CDS |
| GTATTGGATGAATGCACTGT+GGG | 0.529684 | 4_1:-68733498 | None:intergenic |
| TTAACTTTCAGGGATACTGC+AGG | 0.536162 | 4_1:+68732333 | Msa0567370:intron |
| ATATAATTTCAGGCTACTAT+CGG | 0.539656 | 4_1:+68732112 | Msa0567370:intron |
| TTATTGTATTCTTACATCCA+GGG | 0.549799 | 4_1:-68733759 | None:intergenic |
| AAAAGCAGGCTTCAATATCA+AGG | 0.552081 | 4_1:+68733124 | Msa0567370:CDS |
| CACTAACAAGTGGGTTGAGG+AGG | 0.553351 | 4_1:+68732639 | Msa0567370:CDS |
| GAACACTAACAAGTGGGTTG+AGG | 0.553502 | 4_1:+68732636 | Msa0567370:CDS |
| GAATTTGTCGTACATGAAGC+GGG | 0.561469 | 4_1:-68731428 | None:intergenic |
| TTCTACAAATAAGGAAGACA+TGG | 0.563578 | 4_1:+68733458 | Msa0567370:CDS |
| AGATTGCTTCCGCCTTGCCA+GGG | 0.573903 | 4_1:+68733421 | Msa0567370:CDS |
| CATTTATGAGAGAAATGGAT+CGG | 0.579731 | 4_1:-68731329 | None:intergenic |
| CGAATTTGTCGTACATGAAG+CGG | 0.587508 | 4_1:-68731429 | None:intergenic |
| AAGGGTTTCCATCCCTGGCA+AGG | 0.588850 | 4_1:-68733433 | None:intergenic |
| CATTTCTGAACACTAACAAG+TGG | 0.594464 | 4_1:+68732629 | Msa0567370:CDS |
| ATCTTCAGTTAATTGGTGTG+TGG | 0.604711 | 4_1:+68733662 | Msa0567370:three_prime_UTR |
| TCTTCAGTTAATTGGTGTGT+GGG | 0.609677 | 4_1:+68733663 | Msa0567370:three_prime_UTR |
| ATTTCTCTCATAAATGGCGA+CGG | 0.612804 | 4_1:+68731336 | Msa0567370:exon |
| ATTTCTGAACACTAACAAGT+GGG | 0.616106 | 4_1:+68732630 | Msa0567370:CDS |
| GAAGCAATCTTACGAAACAA+AGG | 0.623923 | 4_1:-68733408 | None:intergenic |
| ACGAGCTTGTATTTGGCGAG+AGG | 0.624355 | 4_1:-68731364 | None:intergenic |
| TTTCACTTGAGTATAATACT+GGG | 0.651284 | 4_1:+68733585 | Msa0567370:three_prime_UTR |
| GAGGAGGTGCGTCAAGAACG+TGG | 0.657614 | 4_1:+68732655 | Msa0567370:CDS |
| TGTATTGGATGAATGCACTG+TGG | 0.660739 | 4_1:-68733499 | None:intergenic |
| GAAGAATTGAACCTGATAGG+TGG | 0.666711 | 4_1:-68731455 | None:intergenic |
| TAAATGTAAAGCAAAGCTGG+AGG | 0.681704 | 4_1:+68733618 | Msa0567370:three_prime_UTR |
| TTGGTGTGTGGGACAAATTG+CGG | 0.687470 | 4_1:+68733674 | Msa0567370:three_prime_UTR |
| TCCAATACAGAGCAGCAGGG+AGG | 0.703010 | 4_1:+68733513 | Msa0567370:CDS |
| GGTTTCCATCCCTGGCAAGG+CGG | 0.703532 | 4_1:-68733430 | None:intergenic |
| TCATCCAATACAGAGCAGCA+GGG | 0.714266 | 4_1:+68733510 | Msa0567370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAATGTGATTTATTAA+GGG | - | chr4_1:68731709-68731728 | None:intergenic | 10.0% |
| !!! | TTAATAAATCACATTTTTAA+GGG | + | chr4_1:68731709-68731728 | Msa0567370:intron | 10.0% |
| !! | TATAACAAATGAAAAAATAA+CGG | - | chr4_1:68733731-68733750 | None:intergenic | 10.0% |
| !! | CTTAAAAATGTGATTTATTA+AGG | - | chr4_1:68731710-68731729 | None:intergenic | 15.0% |
| !!! | CTTAATAAATCACATTTTTA+AGG | + | chr4_1:68731708-68731727 | Msa0567370:intron | 15.0% |
| !!! | ACAATGAATTTTAAAAAAAC+TGG | - | chr4_1:68731763-68731782 | None:intergenic | 15.0% |
| !! | AAATTTGATCATATAATTTC+AGG | + | chr4_1:68732102-68732121 | Msa0567370:intron | 15.0% |
| !! | TATCGTTATTTAACTAAAAA+AGG | - | chr4_1:68732549-68732568 | None:intergenic | 15.0% |
| !!! | GTTTTTGTTTAATATCATAT+TGG | + | chr4_1:68732802-68732821 | Msa0567370:intron | 15.0% |
| !! | GTTAATGAAATTAATTGAAT+TGG | - | chr4_1:68732963-68732982 | None:intergenic | 15.0% |
| !! | TCAATTAATTTCATTAACAA+AGG | + | chr4_1:68732965-68732984 | Msa0567370:intron | 15.0% |
| !!! | TGGTCTAATTATTTTTTATA+TGG | + | chr4_1:68733017-68733036 | Msa0567370:intron | 15.0% |
| !! | CAATCACATAAAAAATCATA+GGG | - | chr4_1:68731600-68731619 | None:intergenic | 20.0% |
| !! | AGATTGATCATTCAAAAATT+AGG | + | chr4_1:68731784-68731803 | Msa0567370:intron | 20.0% |
| !!! | AATTCTGATGATTTTTTAAG+AGG | + | chr4_1:68731904-68731923 | Msa0567370:intron | 20.0% |
| !!! | GCTTTTATGTTAGAATATTA+TGG | + | chr4_1:68731926-68731945 | Msa0567370:intron | 20.0% |
| !! | TTCCAACATCATATAATAAA+TGG | + | chr4_1:68732007-68732026 | Msa0567370:intron | 20.0% |
| !! | CAAAAAAATATAAATTGACG+AGG | - | chr4_1:68732210-68732229 | None:intergenic | 20.0% |
| !! | TCAGAAATAGTAAAAAGAAA+AGG | - | chr4_1:68732301-68732320 | None:intergenic | 20.0% |
| !!! | TTAGTGTATTTTAACTTTCA+GGG | + | chr4_1:68732323-68732342 | Msa0567370:intron | 20.0% |
| !! | AGGTTAATAACTATAAATTG+AGG | - | chr4_1:68732579-68732598 | None:intergenic | 20.0% |
| !! | ATGAATATATAGATCAAACT+CGG | - | chr4_1:68732750-68732769 | None:intergenic | 20.0% |
| !! | AATTAATTGAATTGGCTATA+AGG | - | chr4_1:68732955-68732974 | None:intergenic | 20.0% |
| !! | TATTCGATGTAAAACAAAAT+AGG | - | chr4_1:68733295-68733314 | None:intergenic | 20.0% |
| !! | TTCTCAATTTCAATTTTGCA+TGG | + | chr4_1:68731487-68731506 | Msa0567370:intron | 25.0% |
| ! | CCAATCACATAAAAAATCAT+AGG | - | chr4_1:68731601-68731620 | None:intergenic | 25.0% |
| !!! | CCTATGATTTTTTATGTGAT+TGG | + | chr4_1:68731598-68731617 | Msa0567370:intron | 25.0% |
| ! | CTCCATTTATTATATGATGT+TGG | - | chr4_1:68732012-68732031 | None:intergenic | 25.0% |
| ! | CAACATCATATAATAAATGG+AGG | + | chr4_1:68732010-68732029 | Msa0567370:intron | 25.0% |
| ! | ATATAATTTCAGGCTACTAT+CGG | + | chr4_1:68732112-68732131 | Msa0567370:intron | 25.0% |
| ! | AGATGATGCATTATGATTTA+TGG | + | chr4_1:68732252-68732271 | Msa0567370:intron | 25.0% |
| !!! | CTTAGTGTATTTTAACTTTC+AGG | + | chr4_1:68732322-68732341 | Msa0567370:intron | 25.0% |
| ! | TAGTGATGTTATAATTGTCT+TGG | + | chr4_1:68732678-68732697 | Msa0567370:CDS | 25.0% |
| ! | TCTATATATTCATTCACAAC+CGG | + | chr4_1:68732757-68732776 | Msa0567370:intron | 25.0% |
| ! | TAGCAAAATTACAAAGAACA+TGG | - | chr4_1:68732903-68732922 | None:intergenic | 25.0% |
| !!! | CTTTGTAATTTTGCTATGAT+AGG | + | chr4_1:68732907-68732926 | Msa0567370:intron | 25.0% |
| ! | TTTCAAATATTGCGATGTTA+TGG | + | chr4_1:68732997-68733016 | Msa0567370:intron | 25.0% |
| !! | AATGAATTTTCATAGTTGCT+TGG | + | chr4_1:68733155-68733174 | Msa0567370:intron | 25.0% |
| !! | ATGAATTTTCATAGTTGCTT+GGG | + | chr4_1:68733156-68733175 | Msa0567370:intron | 25.0% |
| ! | TTAGATGTGAAAGTTAGTAA+AGG | - | chr4_1:68733263-68733282 | None:intergenic | 25.0% |
| !! | TTCCTTATTTGTAGAAGAAA+GGG | - | chr4_1:68733454-68733473 | None:intergenic | 25.0% |
| !! | TTTTCACTTGAGTATAATAC+TGG | + | chr4_1:68733584-68733603 | Msa0567370:three_prime_UTR | 25.0% |
| ! | TTTCACTTGAGTATAATACT+GGG | + | chr4_1:68733585-68733604 | Msa0567370:three_prime_UTR | 25.0% |
| ! | ATCAATGATCTTCAGTTAAT+TGG | + | chr4_1:68733655-68733674 | Msa0567370:three_prime_UTR | 25.0% |
| ! | TTATTGTATTCTTACATCCA+GGG | - | chr4_1:68733762-68733781 | None:intergenic | 25.0% |
| ! | ATTATTGTATTCTTACATCC+AGG | - | chr4_1:68733763-68733782 | None:intergenic | 25.0% |
| CATTTATGAGAGAAATGGAT+CGG | - | chr4_1:68731332-68731351 | None:intergenic | 30.0% | |
| TAAGAAAACGAGCTTGTATT+TGG | - | chr4_1:68731374-68731393 | None:intergenic | 30.0% | |
| ! | AAATACAAGCTCGTTTTCTT+AGG | + | chr4_1:68731373-68731392 | Msa0567370:CDS | 30.0% |
| AATGAAGAATTGAACCTGAT+AGG | - | chr4_1:68731461-68731480 | None:intergenic | 30.0% | |
| !! | TGATCACAAGTTGATGAATT+AGG | + | chr4_1:68731645-68731664 | Msa0567370:intron | 30.0% |
| !! | AAGTTGATGAATTAGGACTT+TGG | + | chr4_1:68731652-68731671 | Msa0567370:intron | 30.0% |
| ! | TCATTCATAAGTCACTTTCA+AGG | + | chr4_1:68731868-68731887 | Msa0567370:intron | 30.0% |
| TGAAACAAAAAACACCTACA+CGG | - | chr4_1:68732278-68732297 | None:intergenic | 30.0% | |
| TGAGACTTCTAAATCTTTCT+TGG | - | chr4_1:68732359-68732378 | None:intergenic | 30.0% | |
| TATGTGTTTGCATTTGAATC+TGG | + | chr4_1:68732499-68732518 | Msa0567370:intron | 30.0% | |
| TACATTAGAACAGCTTACTT+AGG | - | chr4_1:68732599-68732618 | None:intergenic | 30.0% | |
| ATTTCTGAACACTAACAAGT+GGG | + | chr4_1:68732630-68732649 | Msa0567370:CDS | 30.0% | |
| GATGTTATAATTGTCTTGGT+TGG | + | chr4_1:68732682-68732701 | Msa0567370:CDS | 30.0% | |
| !!! | TTATTTTTTATATGGCCGCT+TGG | + | chr4_1:68733025-68733044 | Msa0567370:intron | 30.0% |
| AACCCTTTCTTCTACAAATA+AGG | + | chr4_1:68733449-68733468 | Msa0567370:CDS | 30.0% | |
| ! | CTTCCTTATTTGTAGAAGAA+AGG | - | chr4_1:68733455-68733474 | None:intergenic | 30.0% |
| TTCTACAAATAAGGAAGACA+TGG | + | chr4_1:68733458-68733477 | Msa0567370:CDS | 30.0% | |
| TCTTAAATGTAAAGCAAAGC+TGG | + | chr4_1:68733615-68733634 | Msa0567370:three_prime_UTR | 30.0% | |
| ! | TTTGTTATACAATTAGTCCC+TGG | + | chr4_1:68733742-68733761 | Msa0567370:three_prime_UTR | 30.0% |
| CGATCCATTTCTCTCATAAA+TGG | + | chr4_1:68731330-68731349 | Msa0567370:exon | 35.0% | |
| ATTTCTCTCATAAATGGCGA+CGG | + | chr4_1:68731336-68731355 | Msa0567370:exon | 35.0% | |
| AATTAGGACTTTGGACGATT+AGG | + | chr4_1:68731661-68731680 | Msa0567370:intron | 35.0% | |
| GGTTTCAACGACTCAAATTA+TGG | - | chr4_1:68731812-68731831 | None:intergenic | 35.0% | |
| TAGCAATCTAGCAACATAGA+GGG | - | chr4_1:68732077-68732096 | None:intergenic | 35.0% | |
| TTAGCAATCTAGCAACATAG+AGG | - | chr4_1:68732078-68732097 | None:intergenic | 35.0% | |
| AACGAACAGTTCTATCTTCA+AGG | - | chr4_1:68732165-68732184 | None:intergenic | 35.0% | |
| ATTATGATTTATGGCCGTGT+AGG | + | chr4_1:68732261-68732280 | Msa0567370:intron | 35.0% | |
| GAAGAATCTCTTATGTAGCT+TGG | - | chr4_1:68732384-68732403 | None:intergenic | 35.0% | |
| TAAGCTGTTCTAATGTAGAC+AGG | + | chr4_1:68732602-68732621 | Msa0567370:intron | 35.0% | |
| CATTTCTGAACACTAACAAG+TGG | + | chr4_1:68732629-68732648 | Msa0567370:CDS | 35.0% | |
| AAACTGATCTTGTCGAGAAA+AGG | + | chr4_1:68732710-68732729 | Msa0567370:CDS | 35.0% | |
| AGGCAAGTTTCTATAGAAGA+AGG | + | chr4_1:68733053-68733072 | Msa0567370:intron | 35.0% | |
| !! | GATTCCAAACTCTTTTGACT+TGG | - | chr4_1:68733084-68733103 | None:intergenic | 35.0% |
| AAAAGCAGGCTTCAATATCA+AGG | + | chr4_1:68733124-68733143 | Msa0567370:CDS | 35.0% | |
| GTTTATCTTCTTTCCCATGT+TGG | + | chr4_1:68733344-68733363 | Msa0567370:intron | 35.0% | |
| ! | TGCATTGACAGATAACAATG+AGG | - | chr4_1:68733379-68733398 | None:intergenic | 35.0% |
| GAAGCAATCTTACGAAACAA+AGG | - | chr4_1:68733411-68733430 | None:intergenic | 35.0% | |
| TAAATGTAAAGCAAAGCTGG+AGG | + | chr4_1:68733618-68733637 | Msa0567370:three_prime_UTR | 35.0% | |
| ATCTTCAGTTAATTGGTGTG+TGG | + | chr4_1:68733662-68733681 | Msa0567370:three_prime_UTR | 35.0% | |
| TCTTCAGTTAATTGGTGTGT+GGG | + | chr4_1:68733663-68733682 | Msa0567370:three_prime_UTR | 35.0% | |
| GTCGCCATTTATGAGAGAAA+TGG | - | chr4_1:68731337-68731356 | None:intergenic | 40.0% | |
| !!! | GATGATACTGGTTTTGCCAA+CGG | - | chr4_1:68731407-68731426 | None:intergenic | 40.0% |
| GAATTTGTCGTACATGAAGC+GGG | - | chr4_1:68731431-68731450 | None:intergenic | 40.0% | |
| CGAATTTGTCGTACATGAAG+CGG | - | chr4_1:68731432-68731451 | None:intergenic | 40.0% | |
| CAAATTCGATACCACCTATC+AGG | + | chr4_1:68731444-68731463 | Msa0567370:CDS | 40.0% | |
| GAAGAATTGAACCTGATAGG+TGG | - | chr4_1:68731458-68731477 | None:intergenic | 40.0% | |
| AGTCGTTGAAACCCTTGAAT+GGG | + | chr4_1:68731819-68731838 | Msa0567370:intron | 40.0% | |
| GAACTCTTCTTCCCATTCAA+GGG | - | chr4_1:68731833-68731852 | None:intergenic | 40.0% | |
| ATGGTGCAATTTCTGCTTAG+TGG | + | chr4_1:68731945-68731964 | Msa0567370:intron | 40.0% | |
| ! | TCTGCTTAGTGGATAAAGCT+TGG | + | chr4_1:68731956-68731975 | Msa0567370:intron | 40.0% |
| AGCAATCTAGCAACATAGAG+GGG | - | chr4_1:68732076-68732095 | None:intergenic | 40.0% | |
| TTAACTTTCAGGGATACTGC+AGG | + | chr4_1:68732333-68732352 | Msa0567370:intron | 40.0% | |
| AAACTTGCCTGTAAACCAAG+CGG | - | chr4_1:68733043-68733062 | None:intergenic | 40.0% | |
| GATGCCAAGTCAAAAGAGTT+TGG | + | chr4_1:68733077-68733096 | Msa0567370:CDS | 40.0% | |
| GTATTGGATGAATGCACTGT+GGG | - | chr4_1:68733501-68733520 | None:intergenic | 40.0% | |
| TGTATTGGATGAATGCACTG+TGG | - | chr4_1:68733502-68733521 | None:intergenic | 40.0% | |
| TTCTTAGGCGATCAATCCGT+TGG | + | chr4_1:68731388-68731407 | Msa0567370:CDS | 45.0% | |
| GAGTCGTTGAAACCCTTGAA+TGG | + | chr4_1:68731818-68731837 | Msa0567370:intron | 45.0% | |
| CGAACTCTTCTTCCCATTCA+AGG | - | chr4_1:68731834-68731853 | None:intergenic | 45.0% | |
| GCAATCTAGCAACATAGAGG+GGG | - | chr4_1:68732075-68732094 | None:intergenic | 45.0% | |
| GAACTGTTCGTTTGCAGCTT+TGG | + | chr4_1:68732173-68732192 | Msa0567370:CDS | 45.0% | |
| !! | GAACACTAACAAGTGGGTTG+AGG | + | chr4_1:68732636-68732655 | Msa0567370:CDS | 45.0% |
| !! | TTCACAACCGGTTTTCTGAC+TGG | + | chr4_1:68732769-68732788 | Msa0567370:intron | 45.0% |
| !! | TCACAACCGGTTTTCTGACT+GGG | + | chr4_1:68732770-68732789 | Msa0567370:intron | 45.0% |
| ACCATACCCAGTCAGAAAAC+CGG | - | chr4_1:68732779-68732798 | None:intergenic | 45.0% | |
| ATAGGTCAAGTGTCTTGCAG+TGG | + | chr4_1:68732925-68732944 | Msa0567370:intron | 45.0% | |
| TATATGGCCGCTTGGTTTAC+AGG | + | chr4_1:68733033-68733052 | Msa0567370:intron | 45.0% | |
| ATCGAAACCAGTGCAAAAGC+AGG | + | chr4_1:68733110-68733129 | Msa0567370:CDS | 45.0% | |
| !! | ATTGAAGCCTGCTTTTGCAC+TGG | - | chr4_1:68733120-68733139 | None:intergenic | 45.0% |
| CAGGCTTCAATATCAAGGTC+AGG | + | chr4_1:68733129-68733148 | Msa0567370:intron | 45.0% | |
| GAGGACACAAGAACCAACAT+GGG | - | chr4_1:68733360-68733379 | None:intergenic | 45.0% | |
| TGAGGACACAAGAACCAACA+TGG | - | chr4_1:68733361-68733380 | None:intergenic | 45.0% | |
| TTCATCCAATACAGAGCAGC+AGG | + | chr4_1:68733509-68733528 | Msa0567370:CDS | 45.0% | |
| TCATCCAATACAGAGCAGCA+GGG | + | chr4_1:68733510-68733529 | Msa0567370:CDS | 45.0% | |
| TTGGTGTGTGGGACAAATTG+CGG | + | chr4_1:68733674-68733693 | Msa0567370:three_prime_UTR | 45.0% | |
| TGTGGGACAAATTGCGGTAA+TGG | + | chr4_1:68733680-68733699 | Msa0567370:three_prime_UTR | 45.0% | |
| ACGAGCTTGTATTTGGCGAG+AGG | - | chr4_1:68731367-68731386 | None:intergenic | 50.0% | |
| CATGAAGCGGGTGATGATAC+TGG | - | chr4_1:68731419-68731438 | None:intergenic | 50.0% | |
| !! | CACTAACAAGTGGGTTGAGG+AGG | + | chr4_1:68732639-68732658 | Msa0567370:CDS | 50.0% |
| !! | ACCGGTTTTCTGACTGGGTA+TGG | + | chr4_1:68732775-68732794 | Msa0567370:intron | 50.0% |
| GAAGAAAGGGTTTCCATCCC+TGG | - | chr4_1:68733441-68733460 | None:intergenic | 50.0% | |
| GAGGAGGTTGCTCATGTTAG+AGG | + | chr4_1:68733532-68733551 | Msa0567370:CDS | 50.0% | |
| AAGATTGCTTCCGCCTTGCC+AGG | + | chr4_1:68733420-68733439 | Msa0567370:CDS | 55.0% | |
| AGATTGCTTCCGCCTTGCCA+GGG | + | chr4_1:68733421-68733440 | Msa0567370:CDS | 55.0% | |
| AAGGGTTTCCATCCCTGGCA+AGG | - | chr4_1:68733436-68733455 | None:intergenic | 55.0% | |
| TCCAATACAGAGCAGCAGGG+AGG | + | chr4_1:68733513-68733532 | Msa0567370:CDS | 55.0% | |
| TCCTCCCTGCTGCTCTGTAT+TGG | - | chr4_1:68733517-68733536 | None:intergenic | 55.0% | |
| AATACAGAGCAGCAGGGAGG+AGG | + | chr4_1:68733516-68733535 | Msa0567370:CDS | 55.0% | |
| ! | GAGGAGGTGCGTCAAGAACG+TGG | + | chr4_1:68732655-68732674 | Msa0567370:CDS | 60.0% |
| GGTTTCCATCCCTGGCAAGG+CGG | - | chr4_1:68733433-68733452 | None:intergenic | 60.0% | |
| TGCTTCCGCCTTGCCAGGGA+TGG | + | chr4_1:68733425-68733444 | Msa0567370:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 68731195 | 68733793 | 68731195 | ID=Msa0567370;Name=Msa0567370 |
| chr4_1 | mRNA | 68731195 | 68733793 | 68731195 | ID=Msa0567370-mRNA-1;Parent=Msa0567370;Name=Msa0567370-mRNA-1;_AED=0.08;_eAED=0.08;_QI=154|1|1|1|1|1|6|242|207 |
| chr4_1 | exon | 68731195 | 68731465 | 68731195 | ID=Msa0567370-mRNA-1:exon:22708;Parent=Msa0567370-mRNA-1 |
| chr4_1 | exon | 68732124 | 68732194 | 68732124 | ID=Msa0567370-mRNA-1:exon:22709;Parent=Msa0567370-mRNA-1 |
| chr4_1 | exon | 68732344 | 68732432 | 68732344 | ID=Msa0567370-mRNA-1:exon:22710;Parent=Msa0567370-mRNA-1 |
| chr4_1 | exon | 68732620 | 68732731 | 68732620 | ID=Msa0567370-mRNA-1:exon:22711;Parent=Msa0567370-mRNA-1 |
| chr4_1 | exon | 68733055 | 68733145 | 68733055 | ID=Msa0567370-mRNA-1:exon:22712;Parent=Msa0567370-mRNA-1 |
| chr4_1 | exon | 68733408 | 68733793 | 68733408 | ID=Msa0567370-mRNA-1:exon:22713;Parent=Msa0567370-mRNA-1 |
| chr4_1 | five_prime_UTR | 68731195 | 68731348 | 68731195 | ID=Msa0567370-mRNA-1:five_prime_utr;Parent=Msa0567370-mRNA-1 |
| chr4_1 | CDS | 68731349 | 68731465 | 68731349 | ID=Msa0567370-mRNA-1:cds;Parent=Msa0567370-mRNA-1 |
| chr4_1 | CDS | 68732124 | 68732194 | 68732124 | ID=Msa0567370-mRNA-1:cds;Parent=Msa0567370-mRNA-1 |
| chr4_1 | CDS | 68732344 | 68732432 | 68732344 | ID=Msa0567370-mRNA-1:cds;Parent=Msa0567370-mRNA-1 |
| chr4_1 | CDS | 68732620 | 68732731 | 68732620 | ID=Msa0567370-mRNA-1:cds;Parent=Msa0567370-mRNA-1 |
| chr4_1 | CDS | 68733055 | 68733145 | 68733055 | ID=Msa0567370-mRNA-1:cds;Parent=Msa0567370-mRNA-1 |
| chr4_1 | CDS | 68733408 | 68733551 | 68733408 | ID=Msa0567370-mRNA-1:cds;Parent=Msa0567370-mRNA-1 |
| chr4_1 | three_prime_UTR | 68733552 | 68733793 | 68733552 | ID=Msa0567370-mRNA-1:three_prime_utr;Parent=Msa0567370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
