Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470960 | XP_013461355.1 | 96.919 | 422 | 13 | 0 | 1 | 422 | 1 | 422 | 0.0 | 847 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470960 | sp|O49285|ACR3_ARATH | 73.427 | 429 | 110 | 3 | 1 | 427 | 1 | 427 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470960 | A0A072VB68 | 96.919 | 422 | 13 | 0 | 1 | 422 | 1 | 422 | 0.0 | 847 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0374750 | Msa0470960 | 0.864550 | 1.121412e-64 | -8.615850e-47 |
| Msa0424040 | Msa0470960 | 0.882530 | 9.641840e-71 | -8.615850e-47 |
| Msa0470960 | Msa0982430 | 0.866179 | 3.445115e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470960 | MtrunA17_Chr3g0125661 | 96.919 | 422 | 13 | 0 | 1 | 422 | 1 | 422 | 0.0 | 847 |
| Msa0470960 | MtrunA17_Chr1g0159541 | 82.477 | 428 | 68 | 5 | 1 | 422 | 1 | 427 | 0.0 | 717 |
| Msa0470960 | MtrunA17_Chr5g0420221 | 55.422 | 415 | 172 | 5 | 8 | 421 | 16 | 418 | 3.25e-155 | 447 |
| Msa0470960 | MtrunA17_Chr7g0222461 | 55.012 | 409 | 172 | 5 | 9 | 414 | 10 | 409 | 7.52e-155 | 446 |
| Msa0470960 | MtrunA17_Chr7g0224571 | 50.980 | 408 | 191 | 5 | 9 | 414 | 1 | 401 | 1.64e-139 | 407 |
| Msa0470960 | MtrunA17_Chr4g0056741 | 49.161 | 417 | 191 | 6 | 6 | 421 | 3 | 399 | 1.17e-132 | 389 |
| Msa0470960 | MtrunA17_Chr5g0398581 | 47.017 | 419 | 201 | 6 | 6 | 423 | 3 | 401 | 4.75e-128 | 377 |
| Msa0470960 | MtrunA17_Chr5g0400941 | 46.083 | 434 | 211 | 9 | 1 | 415 | 1 | 430 | 2.72e-127 | 377 |
| Msa0470960 | MtrunA17_Chr4g0054261 | 40.421 | 428 | 235 | 6 | 7 | 415 | 26 | 452 | 1.24e-108 | 330 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470960 | AT1G76990.4 | 73.427 | 429 | 110 | 3 | 1 | 427 | 1 | 427 | 0.0 | 652 |
| Msa0470960 | AT1G76990.5 | 73.427 | 429 | 110 | 3 | 1 | 427 | 1 | 427 | 0.0 | 652 |
| Msa0470960 | AT1G76990.2 | 73.427 | 429 | 110 | 3 | 1 | 427 | 1 | 427 | 0.0 | 652 |
| Msa0470960 | AT1G76990.3 | 73.427 | 429 | 110 | 3 | 1 | 427 | 1 | 427 | 0.0 | 652 |
| Msa0470960 | AT1G76990.1 | 73.427 | 429 | 110 | 3 | 1 | 427 | 1 | 427 | 0.0 | 652 |
| Msa0470960 | AT1G69040.1 | 53.865 | 414 | 182 | 4 | 9 | 421 | 7 | 412 | 1.13e-146 | 426 |
| Msa0470960 | AT1G69040.2 | 53.865 | 414 | 182 | 4 | 9 | 421 | 11 | 416 | 1.36e-146 | 426 |
| Msa0470960 | AT5G25320.1 | 47.903 | 453 | 204 | 9 | 1 | 422 | 1 | 452 | 3.91e-144 | 421 |
| Msa0470960 | AT2G03730.2 | 51.306 | 421 | 190 | 5 | 4 | 414 | 3 | 418 | 5.00e-143 | 416 |
| Msa0470960 | AT2G03730.1 | 51.306 | 421 | 190 | 5 | 4 | 414 | 3 | 418 | 5.00e-143 | 416 |
| Msa0470960 | AT3G01990.7 | 51.724 | 406 | 176 | 8 | 10 | 410 | 17 | 407 | 5.63e-136 | 398 |
| Msa0470960 | AT3G01990.5 | 51.724 | 406 | 176 | 8 | 10 | 410 | 17 | 407 | 5.63e-136 | 398 |
| Msa0470960 | AT3G01990.6 | 51.724 | 406 | 176 | 8 | 10 | 410 | 17 | 407 | 9.19e-136 | 397 |
| Msa0470960 | AT3G01990.10 | 51.724 | 406 | 176 | 8 | 10 | 410 | 3 | 393 | 1.17e-135 | 397 |
| Msa0470960 | AT3G01990.1 | 51.724 | 406 | 176 | 8 | 10 | 410 | 3 | 393 | 1.17e-135 | 397 |
| Msa0470960 | AT3G01990.11 | 51.724 | 406 | 176 | 8 | 10 | 410 | 3 | 393 | 1.59e-135 | 396 |
| Msa0470960 | AT5G25320.3 | 47.585 | 414 | 187 | 7 | 38 | 422 | 1 | 413 | 6.31e-128 | 378 |
| Msa0470960 | AT1G12420.1 | 47.962 | 417 | 197 | 8 | 8 | 423 | 6 | 403 | 1.89e-121 | 361 |
| Msa0470960 | AT4G22780.1 | 48.507 | 402 | 183 | 7 | 12 | 410 | 9 | 389 | 6.75e-121 | 360 |
| Msa0470960 | AT4G22780.2 | 48.507 | 402 | 183 | 7 | 12 | 410 | 9 | 389 | 6.75e-121 | 360 |
| Msa0470960 | AT5G65890.1 | 42.691 | 431 | 228 | 6 | 7 | 420 | 8 | 436 | 5.00e-111 | 335 |
| Msa0470960 | AT5G65890.3 | 42.691 | 431 | 228 | 6 | 7 | 420 | 8 | 436 | 5.00e-111 | 335 |
| Msa0470960 | AT5G25320.2 | 46.113 | 373 | 170 | 8 | 1 | 342 | 1 | 373 | 1.39e-108 | 326 |
| Msa0470960 | AT3G01990.4 | 50.437 | 343 | 150 | 8 | 10 | 347 | 17 | 344 | 8.37e-107 | 320 |
| Msa0470960 | AT3G01990.9 | 50.437 | 343 | 150 | 8 | 10 | 347 | 3 | 330 | 1.51e-106 | 319 |
| Msa0470960 | AT3G01990.2 | 50.888 | 338 | 146 | 8 | 10 | 342 | 17 | 339 | 1.75e-106 | 319 |
| Msa0470960 | AT1G12420.2 | 46.418 | 349 | 168 | 7 | 76 | 423 | 1 | 331 | 1.67e-93 | 287 |
| Msa0470960 | AT5G65890.4 | 40.674 | 386 | 210 | 6 | 52 | 420 | 1 | 384 | 1.94e-91 | 283 |
| Msa0470960 | AT5G65890.2 | 40.674 | 386 | 210 | 6 | 52 | 420 | 1 | 384 | 1.94e-91 | 283 |
| Msa0470960 | AT3G01990.8 | 48.896 | 317 | 142 | 8 | 10 | 321 | 3 | 304 | 1.33e-87 | 270 |
| Msa0470960 | AT3G01990.3 | 48.896 | 317 | 142 | 8 | 10 | 321 | 17 | 318 | 1.43e-87 | 270 |
| Msa0470960 | AT5G65890.5 | 39.103 | 312 | 174 | 5 | 123 | 420 | 13 | 322 | 2.56e-69 | 224 |
Find 129 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCACTTCTTCTTTGTTC+TGG | 0.217028 | 3_3:-73152923 | None:intergenic |
| CCAAATGTTGTTTGCTGATC+GGG | 0.257041 | 3_3:+73153283 | Msa0470960:CDS |
| CACTTATTGCATACAGTACT+TGG | 0.259416 | 3_3:+73154439 | Msa0470960:CDS |
| CTTGTGTTATAGTTCAGATT+AGG | 0.280857 | 3_3:-73154535 | None:intergenic |
| TGGTGTGGGCGTGGGCTTAA+TGG | 0.286912 | 3_3:-73148928 | None:intergenic |
| ACCTTTAGGAATACTTTATT+CGG | 0.293495 | 3_3:+73153931 | Msa0470960:intron |
| GGTGGAGCCGCCTATCAATA+TGG | 0.298908 | 3_3:-73153262 | None:intergenic |
| GGGAATGTCCTCCCTCTTTC+CGG | 0.308334 | 3_3:+73153339 | Msa0470960:CDS |
| TTGTGTTATAGTTCAGATTA+GGG | 0.316265 | 3_3:-73154534 | None:intergenic |
| ATTGGTCAGGCAAATGGGTT+GGG | 0.336152 | 3_3:+73152946 | Msa0470960:CDS |
| CAGCTACAACCACGTTAAAA+TGG | 0.336988 | 3_3:-73153061 | None:intergenic |
| TCATACTCAGGATCAAAATA+TGG | 0.343119 | 3_3:-73149967 | None:intergenic |
| GCTTGCATTTGTTTGCTCTC+TGG | 0.354641 | 3_3:-73154571 | None:intergenic |
| ATAGAATGTTGTGAGGAAAA+AGG | 0.357579 | 3_3:+73153374 | Msa0470960:CDS |
| ACCACTTCCAGTAGAATTCC+AGG | 0.366064 | 3_3:-73151727 | None:intergenic |
| CATATAGCAATTGAGCTAAT+CGG | 0.371261 | 3_3:+73152987 | Msa0470960:CDS |
| CCCGATCAGCAAACAACATT+TGG | 0.373612 | 3_3:-73153283 | None:intergenic |
| ACAAAGAAGAAGTGAAGAAT+TGG | 0.384276 | 3_3:+73152928 | Msa0470960:CDS |
| AAAGTGAACACTCCAATGTT+TGG | 0.398604 | 3_3:-73148869 | None:intergenic |
| CTTGCAAAGTGGTGTGGGCG+TGG | 0.405848 | 3_3:-73148937 | None:intergenic |
| TTGTACCATCATTGACATAA+AGG | 0.411329 | 3_3:-73153118 | None:intergenic |
| CTGAAGTGTGGACTCATAAC+AGG | 0.416112 | 3_3:+73153081 | Msa0470960:CDS |
| ATCAGAAGATATGTAAGCTT+TGG | 0.416198 | 3_3:-73151782 | None:intergenic |
| TGAGTTTCACCCATATTGAT+AGG | 0.418165 | 3_3:+73153252 | Msa0470960:CDS |
| TGAAGAATTGGTCAGGCAAA+TGG | 0.419920 | 3_3:+73152940 | Msa0470960:CDS |
| CCTTGATTAGTGTACAGTTA+TGG | 0.426480 | 3_3:-73150772 | None:intergenic |
| TTCTGATGGAGGATGGTTCA+TGG | 0.433562 | 3_3:+73151798 | Msa0470960:CDS |
| TTCTATGTGAGGGATGCATC+AGG | 0.435247 | 3_3:+73154308 | Msa0470960:CDS |
| TTGCTGAAATTCTCATACTC+AGG | 0.439597 | 3_3:-73149979 | None:intergenic |
| CAATTTCTTTCAAATAATCA+AGG | 0.442852 | 3_3:+73149274 | Msa0470960:five_prime_UTR |
| GAAGCACTTCGTAAAGAAAT+CGG | 0.445977 | 3_3:+73154356 | Msa0470960:CDS |
| TTAGAATGGCTGCAGTTTGT+TGG | 0.449593 | 3_3:+73149944 | Msa0470960:exon |
| GGTGAAACTCATGGACAAAC+TGG | 0.453115 | 3_3:-73153240 | None:intergenic |
| AACCATAGATCTCATTGAAA+AGG | 0.459867 | 3_3:+73152691 | Msa0470960:CDS |
| GATCGGGATTATGAAAGTTA+TGG | 0.463149 | 3_3:+73153299 | Msa0470960:CDS |
| ATTAAGAGCTTGTTCCCCTC+TGG | 0.467903 | 3_3:-73154282 | None:intergenic |
| AGAATGGCCTAACAGTTTGT+AGG | 0.468609 | 3_3:+73154246 | Msa0470960:CDS |
| ATACAGAAGGGGAGAAAGAA+AGG | 0.470876 | 3_3:+73153976 | Msa0470960:CDS |
| GGCCTAACAGTTTGTAGGGC+AGG | 0.474532 | 3_3:+73154251 | Msa0470960:CDS |
| ACCAAATGTTGTTTGCTGAT+CGG | 0.476294 | 3_3:+73153282 | Msa0470960:CDS |
| ATATAGCAATTGAGCTAATC+GGG | 0.478241 | 3_3:+73152988 | Msa0470960:CDS |
| TAACAAACCTGGAATTCTAC+TGG | 0.480298 | 3_3:+73151720 | Msa0470960:CDS |
| ATCAATATGGGTGAAACTCA+TGG | 0.480529 | 3_3:-73153249 | None:intergenic |
| GTTTCTCTTGCAAAGTGGTG+TGG | 0.483534 | 3_3:-73148943 | None:intergenic |
| TTTCTCTTGCAAAGTGGTGT+GGG | 0.484468 | 3_3:-73148942 | None:intergenic |
| TTGCAAAGTGGTGTGGGCGT+GGG | 0.488467 | 3_3:-73148936 | None:intergenic |
| ACTAGAGAAGCTGGTTAGAA+TGG | 0.489845 | 3_3:+73149930 | Msa0470960:exon |
| GAAGAAGTGAAGAATTGGTC+AGG | 0.491176 | 3_3:+73152933 | Msa0470960:CDS |
| TTCTCATTGACTAGAGAAGC+TGG | 0.493273 | 3_3:+73149921 | Msa0470960:five_prime_UTR |
| AATTGGTCAGGCAAATGGGT+TGG | 0.499259 | 3_3:+73152945 | Msa0470960:CDS |
| ACAAGAATTCTGAGAGAGAA+TGG | 0.499775 | 3_3:+73154230 | Msa0470960:CDS |
| TGGGTTGGGGTGCATTCTGT+TGG | 0.500255 | 3_3:+73152960 | Msa0470960:CDS |
| CCATAACTGTACACTAATCA+AGG | 0.500495 | 3_3:+73150772 | Msa0470960:CDS |
| TACTTTATTCGGCACATGGA+CGG | 0.504584 | 3_3:+73153942 | Msa0470960:CDS |
| ATGGAGAGAAAGTTGCTAGT+AGG | 0.510505 | 3_3:+73153216 | Msa0470960:CDS |
| TGATGTACCTGCGATGCATA+AGG | 0.510772 | 3_3:-73153512 | None:intergenic |
| ATCCGATGAGATTGTGGCAT+GGG | 0.515862 | 3_3:-73153486 | None:intergenic |
| GAAGAATTGGTCAGGCAAAT+GGG | 0.517093 | 3_3:+73152941 | Msa0470960:CDS |
| ATCTTTACATAAGCGTGTGT+TGG | 0.518351 | 3_3:+73149241 | Msa0470960:five_prime_UTR |
| ACCTGGAATTCTACTGGAAG+TGG | 0.521746 | 3_3:+73151726 | Msa0470960:CDS |
| CGTTAAAATGGAGGCTGGCA+AGG | 0.523869 | 3_3:-73153049 | None:intergenic |
| TGTGTCCTTTATGTCAATGA+TGG | 0.524064 | 3_3:+73153113 | Msa0470960:CDS |
| GTGGAGCCGCCTATCAATAT+GGG | 0.526124 | 3_3:-73153261 | None:intergenic |
| AGTTGATTCATTCTAACAGT+TGG | 0.527919 | 3_3:-73154410 | None:intergenic |
| TATCCTTTGCACACAACTCT+AGG | 0.530398 | 3_3:-73154184 | None:intergenic |
| TTTGATAGTGTTAACAAACC+TGG | 0.530560 | 3_3:+73151709 | Msa0470960:CDS |
| AAGATTAAGGTAAACCTTGG+AGG | 0.533637 | 3_3:-73150012 | None:intergenic |
| GATCAGCAAACAACATTTGG+TGG | 0.537075 | 3_3:-73153280 | None:intergenic |
| ATGGAGTAACGACAACAGAC+AGG | 0.537588 | 3_3:+73153318 | Msa0470960:CDS |
| AGAGAGATTGTTAAACTAAG+TGG | 0.538851 | 3_3:+73149016 | Msa0470960:five_prime_UTR |
| AAAGCTTACATATCTTCTGA+TGG | 0.539350 | 3_3:+73151784 | Msa0470960:CDS |
| GTTGTGTGCAAAGGATAGAG+TGG | 0.544908 | 3_3:+73154190 | Msa0470960:CDS |
| ACATATCTTCTGATGGAGGA+TGG | 0.557362 | 3_3:+73151791 | Msa0470960:CDS |
| GAATGGCCTAACAGTTTGTA+GGG | 0.559276 | 3_3:+73154247 | Msa0470960:CDS |
| TTGTGTGCAAAGGATAGAGT+GGG | 0.560363 | 3_3:+73154191 | Msa0470960:CDS |
| CAATGATGGACATGGAAGCT+TGG | 0.560378 | 3_3:-73149201 | None:intergenic |
| GATATCTCAGACAAGAGACC+AGG | 0.560821 | 3_3:-73153020 | None:intergenic |
| TGTGGGCGTGGGCTTAATGG+TGG | 0.560993 | 3_3:-73148925 | None:intergenic |
| ACTTATTGCATACAGTACTT+GGG | 0.561986 | 3_3:+73154440 | Msa0470960:CDS |
| TTGGTCAGGCAAATGGGTTG+GGG | 0.568849 | 3_3:+73152947 | Msa0470960:CDS |
| CTCTTAATGTCTTCTATGTG+AGG | 0.569159 | 3_3:+73154297 | Msa0470960:CDS |
| AGAAATCGGTAAGACAATGA+TGG | 0.575183 | 3_3:+73154370 | Msa0470960:CDS |
| GCAACAAAATCAACCCTCCA+AGG | 0.576070 | 3_3:+73149998 | Msa0470960:CDS |
| GGAATACTTTATTCGGCACA+TGG | 0.576960 | 3_3:+73153938 | Msa0470960:intron |
| GGATGCACACTTGATACAGA+AGG | 0.577234 | 3_3:+73153963 | Msa0470960:CDS |
| AATGATGGTAGATGTGAAGA+AGG | 0.579827 | 3_3:+73154385 | Msa0470960:CDS |
| AACCACGTTAAAATGGAGGC+TGG | 0.580495 | 3_3:-73153054 | None:intergenic |
| CTTTGGTGATTATGAAGTCA+AGG | 0.580969 | 3_3:-73151765 | None:intergenic |
| AGATTAAGGTAAACCTTGGA+GGG | 0.581667 | 3_3:-73150011 | None:intergenic |
| TTCCCATGCCACAATCTCAT+CGG | 0.582164 | 3_3:+73153484 | Msa0470960:CDS |
| AGGGCGATCCGATGAGATTG+TGG | 0.584876 | 3_3:-73153492 | None:intergenic |
| CACAAGCAAACTTGTAACGT+TGG | 0.588428 | 3_3:-73154473 | None:intergenic |
| GGATCGCCCTTATGCATCGC+AGG | 0.593884 | 3_3:+73153505 | Msa0470960:CDS |
| GTTATAGTTCAGATTAGGGG+AGG | 0.594836 | 3_3:-73154530 | None:intergenic |
| ATCTTGTTTCTCTTGCAAAG+TGG | 0.600008 | 3_3:-73148948 | None:intergenic |
| TGATGGTACAAGACAAGCCG+TGG | 0.600705 | 3_3:+73153130 | Msa0470960:CDS |
| GATATCGTATCTCCAAACAT+TGG | 0.601274 | 3_3:+73148857 | None:intergenic |
| TACCTGCCCTACAAACTGTT+AGG | 0.606101 | 3_3:-73154253 | None:intergenic |
| ATATACAGTATTTCATGTCA+CGG | 0.612062 | 3_3:+73152637 | Msa0470960:intron |
| TCTTAATGTCTTCTATGTGA+GGG | 0.617321 | 3_3:+73154298 | Msa0470960:CDS |
| GGGCAGGTATATCAACCAGA+GGG | 0.617488 | 3_3:+73154267 | Msa0470960:CDS |
| GATGTACCTGCGATGCATAA+GGG | 0.618291 | 3_3:-73153511 | None:intergenic |
| GCTTACATATCTTCTGATGG+AGG | 0.624587 | 3_3:+73151787 | Msa0470960:CDS |
| TTTCATGTCACGGATCAACA+AGG | 0.626341 | 3_3:+73152647 | Msa0470960:CDS |
| TACAGAAGGGGAGAAAGAAA+GGG | 0.629110 | 3_3:+73153977 | Msa0470960:CDS |
| AGATTCTCTACTTTCGACGT+TGG | 0.629510 | 3_3:-73149043 | None:intergenic |
| CTAATCGGGAGAGACCGCCC+TGG | 0.632484 | 3_3:+73153002 | Msa0470960:CDS |
| TGTGTTATAGTTCAGATTAG+GGG | 0.632978 | 3_3:-73154533 | None:intergenic |
| GATGCACACTTGATACAGAA+GGG | 0.635196 | 3_3:+73153964 | Msa0470960:CDS |
| TGTACTTTGCAGGGTCTCCG+TGG | 0.635916 | 3_3:+73150736 | Msa0470960:intron |
| TCTATGTGAGGGATGCATCA+GGG | 0.636872 | 3_3:+73154309 | Msa0470960:CDS |
| ACGTGGTTGTAGCTGAAGTG+TGG | 0.647683 | 3_3:+73153069 | Msa0470960:CDS |
| GATCCGATGAGATTGTGGCA+TGG | 0.649683 | 3_3:-73153487 | None:intergenic |
| GATGGAGGATGGTTCATGGA+TGG | 0.659799 | 3_3:+73151802 | Msa0470960:CDS |
| CTACAACCACGTTAAAATGG+AGG | 0.661407 | 3_3:-73153058 | None:intergenic |
| TTCATGTCACGGATCAACAA+GGG | 0.666664 | 3_3:+73152648 | Msa0470960:CDS |
| AATTACCATAGAATGTTGTG+AGG | 0.670161 | 3_3:+73153367 | Msa0470960:CDS |
| ATGCACACTTGATACAGAAG+GGG | 0.670406 | 3_3:+73153965 | Msa0470960:CDS |
| ATGGCAACTAGCATTGTCCA+CGG | 0.673612 | 3_3:-73150753 | None:intergenic |
| TATTCAAAGAAGAGTAAGCG+AGG | 0.682011 | 3_3:+73154022 | Msa0470960:CDS |
| GTTTCACCCATATTGATAGG+CGG | 0.683397 | 3_3:+73153255 | Msa0470960:CDS |
| TGGAGTAACGACAACAGACA+GGG | 0.688299 | 3_3:+73153319 | Msa0470960:CDS |
| AATCTGCATCTGAGACACAC+AGG | 0.689398 | 3_3:+73149061 | Msa0470960:five_prime_UTR |
| ATATCTCAGACAAGAGACCA+GGG | 0.700312 | 3_3:-73153019 | None:intergenic |
| GGATGCATCAGGGAACTCAG+TGG | 0.701774 | 3_3:+73154319 | Msa0470960:CDS |
| GAGCCTAGAGTTGTGTGCAA+AGG | 0.708129 | 3_3:+73154181 | Msa0470960:CDS |
| AGGGCAGGTATATCAACCAG+AGG | 0.716826 | 3_3:+73154266 | Msa0470960:CDS |
| GGCAGGTATATCAACCAGAG+GGG | 0.745288 | 3_3:+73154268 | Msa0470960:CDS |
| TCTCAGACAAGAGACCAGGG+CGG | 0.828951 | 3_3:-73153016 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTACTCTATAATAT+GGG | - | chr3_3:73149613-73149632 | None:intergenic | 10.0% |
| !!! | AAATATAAAATACTTTTGTA+AGG | + | chr3_3:73150156-73150175 | Msa0470960:intron | 10.0% |
| !!! | AATTAAAACTGAAAAATTTT+CGG | - | chr3_3:73151210-73151229 | None:intergenic | 10.0% |
| !!! | GAAAAAAAAAAAAATTTTGA+AGG | + | chr3_3:73151303-73151322 | Msa0470960:intron | 10.0% |
| !!! | AATTGAATATAATTTGTAAA+AGG | - | chr3_3:73151527-73151546 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGAAC+CGG | + | chr3_3:73152281-73152300 | Msa0470960:intron | 10.0% |
| !!! | ATGTATAAATAAATTTTTCA+AGG | + | chr3_3:73152845-73152864 | Msa0470960:intron | 10.0% |
| !!! | TGTATAAATAAATTTTTCAA+GGG | + | chr3_3:73152846-73152865 | Msa0470960:intron | 10.0% |
| !!! | TGTAATTTTTTAGTTAATCA+TGG | + | chr3_3:73148898-73148917 | Msa0470960:five_prime_UTR | 15.0% |
| !!! | GTAATTTTTTAGTTAATCAT+GGG | + | chr3_3:73148899-73148918 | Msa0470960:five_prime_UTR | 15.0% |
| !!! | TTAAGTAAAATGGTTTTAAT+TGG | - | chr3_3:73149413-73149432 | None:intergenic | 15.0% |
| !! | CTTGTAAAAATTAAGTAAAA+TGG | - | chr3_3:73149423-73149442 | None:intergenic | 15.0% |
| !!! | GTATATTTTACTCTATAATA+TGG | - | chr3_3:73149614-73149633 | None:intergenic | 15.0% |
| !!! | CTTTAAAATTTAACCAAATA+TGG | + | chr3_3:73150052-73150071 | Msa0470960:intron | 15.0% |
| !! | TAAAAAATAGAAAAACTCTA+GGG | - | chr3_3:73150927-73150946 | None:intergenic | 15.0% |
| !!! | AGTTTTTCTATTTTTTACAA+AGG | + | chr3_3:73150930-73150949 | Msa0470960:intron | 15.0% |
| !! | AAAAAAAAAAAAATAAGCCA+GGG | - | chr3_3:73151133-73151152 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAAATAAGCC+AGG | - | chr3_3:73151134-73151153 | None:intergenic | 15.0% |
| !!! | AAAACTGAATTTTTTTTTGA+AGG | - | chr3_3:73151159-73151178 | None:intergenic | 15.0% |
| !! | AAAAATCGCAAAAAAAATTT+GGG | - | chr3_3:73151184-73151203 | None:intergenic | 15.0% |
| !! | AAAAAATCGCAAAAAAAATT+TGG | - | chr3_3:73151185-73151204 | None:intergenic | 15.0% |
| !!! | ATTAAAACTGAAAAATTTTC+GGG | - | chr3_3:73151209-73151228 | None:intergenic | 15.0% |
| !!! | TATTCAATTTTCAAACTTAT+AGG | + | chr3_3:73151538-73151557 | Msa0470960:intron | 15.0% |
| !! | TTCATAAAGAATCATTTATT+TGG | + | chr3_3:73151639-73151658 | Msa0470960:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTTGAACC+GGG | + | chr3_3:73152282-73152301 | Msa0470960:intron | 15.0% |
| !! | TATATTCATTTATCAAGATA+TGG | + | chr3_3:73152749-73152768 | Msa0470960:intron | 15.0% |
| !!! | AATTTATTCTTGTAACATTT+TGG | - | chr3_3:73153840-73153859 | None:intergenic | 15.0% |
| !! | CAATTTCTTTCAAATAATCA+AGG | + | chr3_3:73149274-73149293 | Msa0470960:five_prime_UTR | 20.0% |
| !! | ATTAAAGAAAGTCATTGTAT+TGG | - | chr3_3:73149706-73149725 | None:intergenic | 20.0% |
| !!! | ATATACTTACCTTTTTTTTG+AGG | + | chr3_3:73149738-73149757 | Msa0470960:intron | 20.0% |
| !! | GTACATAAAAAAATAGAGTT+TGG | - | chr3_3:73149778-73149797 | None:intergenic | 20.0% |
| !! | AATTAGAATGTTATATCACT+TGG | + | chr3_3:73149869-73149888 | Msa0470960:intron | 20.0% |
| !! | AAAAGGAATATTACCATATT+TGG | - | chr3_3:73150068-73150087 | None:intergenic | 20.0% |
| !! | ATACATCAATTTCTCATAAA+TGG | - | chr3_3:73150235-73150254 | None:intergenic | 20.0% |
| !! | AAAAAATAGAAAAACTCTAG+GGG | - | chr3_3:73150926-73150945 | None:intergenic | 20.0% |
| !! | GTAAAAAATAGAAAAACTCT+AGG | - | chr3_3:73150928-73150947 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAATAAGCCAG+GGG | - | chr3_3:73151132-73151151 | None:intergenic | 20.0% |
| !!! | TTAAAACTGAAAAATTTTCG+GGG | - | chr3_3:73151208-73151227 | None:intergenic | 20.0% |
| !! | TTTAACTGATTAAACTTTGT+AGG | + | chr3_3:73151422-73151441 | Msa0470960:intron | 20.0% |
| !! | TTAACTGATTAAACTTTGTA+GGG | + | chr3_3:73151423-73151442 | Msa0470960:intron | 20.0% |
| !! | GATTCTTTATGAAACAATAA+AGG | - | chr3_3:73151632-73151651 | None:intergenic | 20.0% |
| !! | CTCTTGACTATTATTAATAA+CGG | - | chr3_3:73151946-73151965 | None:intergenic | 20.0% |
| !!! | TTTCTATTTTTTCAAGCTTA+GGG | - | chr3_3:73152166-73152185 | None:intergenic | 20.0% |
| !! | AAAAAATAGAAAGAAAGTTG+TGG | + | chr3_3:73152174-73152193 | Msa0470960:intron | 20.0% |
| !! | ACTTTAACACTCTTTATTAT+TGG | + | chr3_3:73152417-73152436 | Msa0470960:intron | 20.0% |
| !! | CTTTAACACTCTTTATTATT+GGG | + | chr3_3:73152418-73152437 | Msa0470960:intron | 20.0% |
| !! | AATTATGCAATGTAAAAGTA+TGG | + | chr3_3:73152479-73152498 | Msa0470960:intron | 20.0% |
| !! | TTAAATACTTGTATCAAGTA+GGG | - | chr3_3:73152592-73152611 | None:intergenic | 20.0% |
| !! | GAAATACTGTATATATCAAT+CGG | - | chr3_3:73152631-73152650 | None:intergenic | 20.0% |
| !!! | TTAACAGTTTTTCATACAAT+AGG | + | chr3_3:73152884-73152903 | Msa0470960:intron | 20.0% |
| !! | TCAAAAAAGAATATCTCTTA+TGG | + | chr3_3:73153157-73153176 | Msa0470960:CDS | 20.0% |
| !!! | GAATTTTTTCTATAAGATAG+AGG | + | chr3_3:73153635-73153654 | Msa0470960:intron | 20.0% |
| !!! | TTCCTACTAATTTTGTTTAT+TGG | + | chr3_3:73153777-73153796 | Msa0470960:intron | 20.0% |
| !!! | AATAATTTTCAGACAAACAA+GGG | - | chr3_3:73153804-73153823 | None:intergenic | 20.0% |
| !!! | AAATAATTTTCAGACAAACA+AGG | - | chr3_3:73153805-73153824 | None:intergenic | 20.0% |
| !! | AGTCTTAGTATTAAATTCTA+CGG | + | chr3_3:73154140-73154159 | Msa0470960:intron | 20.0% |
| !!! | TTTTTTTCTCAAAAGAGAGA+TGG | + | chr3_3:73148972-73148991 | Msa0470960:five_prime_UTR | 25.0% |
| !! | AAGAGATTTCTTTTACTAGT+AGG | - | chr3_3:73149481-73149500 | None:intergenic | 25.0% |
| ! | TAGAGTAAAATATACCAAAG+TGG | + | chr3_3:73149619-73149638 | Msa0470960:intron | 25.0% |
| ! | ATATACTTGCCTCAAAAAAA+AGG | - | chr3_3:73149750-73149769 | None:intergenic | 25.0% |
| !! | CACTTTGTGTAGTAATATTT+TGG | - | chr3_3:73150574-73150593 | None:intergenic | 25.0% |
| ! | CAAAATATTACTACACAAAG+TGG | + | chr3_3:73150572-73150591 | Msa0470960:intron | 25.0% |
| ! | TTAACTGATTAAACTTTGCA+GGG | - | chr3_3:73151034-73151053 | None:intergenic | 25.0% |
| ! | TTTAACTGATTAAACTTTGC+AGG | - | chr3_3:73151035-73151054 | None:intergenic | 25.0% |
| ! | TAACTGATTAAACTTTGTAG+GGG | + | chr3_3:73151424-73151443 | Msa0470960:intron | 25.0% |
| !! | TCTTTGTAGCTAATGAATTT+TGG | - | chr3_3:73151856-73151875 | None:intergenic | 25.0% |
| ! | CGTTATTAATAATAGTCAAG+AGG | + | chr3_3:73151944-73151963 | Msa0470960:intron | 25.0% |
| ! | TATTAATAATAGTCAAGAGG+TGG | + | chr3_3:73151947-73151966 | Msa0470960:intron | 25.0% |
| ! | TTAGGAGTAATGTTGTAATA+TGG | + | chr3_3:73152106-73152125 | Msa0470960:intron | 25.0% |
| !!! | CAACTTGTATTTTAACACTA+AGG | - | chr3_3:73152132-73152151 | None:intergenic | 25.0% |
| !!! | CTTTCTATTTTTTCAAGCTT+AGG | - | chr3_3:73152167-73152186 | None:intergenic | 25.0% |
| ! | CGATGAGTAATTGAAAAAAA+CGG | + | chr3_3:73152325-73152344 | Msa0470960:intron | 25.0% |
| ! | TGCCTATCATAAAAATGAAA+TGG | + | chr3_3:73152356-73152375 | Msa0470960:intron | 25.0% |
| !!! | TGCCATTTCATTTTTATGAT+AGG | - | chr3_3:73152361-73152380 | None:intergenic | 25.0% |
| !!! | TAATAAAGAGTGTTAAAGTG+TGG | - | chr3_3:73152416-73152435 | None:intergenic | 25.0% |
| ! | CTTAAATACTTGTATCAAGT+AGG | - | chr3_3:73152593-73152612 | None:intergenic | 25.0% |
| ! | ATATACAGTATTTCATGTCA+CGG | + | chr3_3:73152637-73152656 | Msa0470960:intron | 25.0% |
| ! | TTGTATGAAAAACTGTTAAC+AGG | - | chr3_3:73152883-73152902 | None:intergenic | 25.0% |
| !!! | TATTCTTTTTTGATCATCCA+CGG | - | chr3_3:73153150-73153169 | None:intergenic | 25.0% |
| ! | AAAAAGAATATCTCTTATGG+AGG | + | chr3_3:73153160-73153179 | Msa0470960:CDS | 25.0% |
| !! | CAACATTCTATGGTAATTTT+CGG | - | chr3_3:73153365-73153384 | None:intergenic | 25.0% |
| !!! | CATTATTCTGTTTCTATGTA+AGG | - | chr3_3:73153699-73153718 | None:intergenic | 25.0% |
| ! | GTCCAATAAACAAAATTAGT+AGG | - | chr3_3:73153782-73153801 | None:intergenic | 25.0% |
| ! | TACAAGAATAAATTCTCACT+TGG | + | chr3_3:73153846-73153865 | Msa0470960:intron | 25.0% |
| ! | ATTAGAAATATGAAGACTTG+AGG | + | chr3_3:73153882-73153901 | Msa0470960:intron | 25.0% |
| !! | ACCTTTAGGAATACTTTATT+CGG | + | chr3_3:73153931-73153950 | Msa0470960:intron | 25.0% |
| !! | GTATTAAATTCTACGGATTT+TGG | + | chr3_3:73154147-73154166 | Msa0470960:intron | 25.0% |
| ! | TTGTGTTATAGTTCAGATTA+GGG | - | chr3_3:73154537-73154556 | None:intergenic | 25.0% |
| AGAGAGATTGTTAAACTAAG+TGG | + | chr3_3:73149016-73149035 | Msa0470960:five_prime_UTR | 30.0% | |
| !!! | AATTTTGTCAATGATGGACA+TGG | - | chr3_3:73149212-73149231 | None:intergenic | 30.0% |
| ! | GCTGTAAATTTTGTCAATGA+TGG | - | chr3_3:73149218-73149237 | None:intergenic | 30.0% |
| TCATACTCAGGATCAAAATA+TGG | - | chr3_3:73149970-73149989 | None:intergenic | 30.0% | |
| GATAAGATTAAGGTAAACCT+TGG | - | chr3_3:73150018-73150037 | None:intergenic | 30.0% | |
| GCGAAATCAAGATAAGATTA+AGG | - | chr3_3:73150028-73150047 | None:intergenic | 30.0% | |
| !!! | ATTTGATGGTTTTAGGCAAA+AGG | - | chr3_3:73150085-73150104 | None:intergenic | 30.0% |
| AGCTCTGTTAAAAAAAGAGA+AGG | - | chr3_3:73150305-73150324 | None:intergenic | 30.0% | |
| ! | CAAACTCATCTTAGTTCTTT+CGG | + | chr3_3:73150362-73150381 | Msa0470960:intron | 30.0% |
| AGATTAAGGTTCAAACTCAT+AGG | - | chr3_3:73150454-73150473 | None:intergenic | 30.0% | |
| ! | ATTGGTTTCAGCTAAGATTA+AGG | - | chr3_3:73150468-73150487 | None:intergenic | 30.0% |
| AGATTGTGTTAAAAGGAGAT+CGG | - | chr3_3:73150505-73150524 | None:intergenic | 30.0% | |
| CATGATCAGATTGTGTTAAA+AGG | - | chr3_3:73150512-73150531 | None:intergenic | 30.0% | |
| TTTAACACAATCTGATCATG+AGG | + | chr3_3:73150512-73150531 | Msa0470960:intron | 30.0% | |
| GCTTCAGTTTCTACTTTAAT+TGG | + | chr3_3:73150658-73150677 | Msa0470960:intron | 30.0% | |
| AATGAAGTTTACCATCAAAG+AGG | - | chr3_3:73150716-73150735 | None:intergenic | 30.0% | |
| AAACTTCATTTGTACTTTGC+AGG | + | chr3_3:73150726-73150745 | Msa0470960:intron | 30.0% | |
| AACTTCATTTGTACTTTGCA+GGG | + | chr3_3:73150727-73150746 | Msa0470960:intron | 30.0% | |
| ATGGAAAAAAGTCATCAAAG+AGG | - | chr3_3:73150828-73150847 | None:intergenic | 30.0% | |
| !!! | TCTTTGATGACTTTTTTCCA+TGG | + | chr3_3:73150827-73150846 | Msa0470960:intron | 30.0% |
| TAACTGATTAAACTTTGCAG+GGG | - | chr3_3:73151033-73151052 | None:intergenic | 30.0% | |
| !! | ATTGTGTTAATTTGATGACG+TGG | - | chr3_3:73151087-73151106 | None:intergenic | 30.0% |
| ACGTCATCAAATTAACACAA+TGG | + | chr3_3:73151086-73151105 | Msa0470960:intron | 30.0% | |
| ATCAAATTAACACAATGGCA+TGG | + | chr3_3:73151091-73151110 | Msa0470960:intron | 30.0% | |
| TCAAATTAACACAATGGCAT+GGG | + | chr3_3:73151092-73151111 | Msa0470960:intron | 30.0% | |
| AAGGAAAAAAAAATTAGCCC+AGG | + | chr3_3:73151322-73151341 | Msa0470960:intron | 30.0% | |
| AGGAAAAAAAAATTAGCCCA+GGG | + | chr3_3:73151323-73151342 | Msa0470960:intron | 30.0% | |
| CAAAATTACCATAATGGCAT+GGG | - | chr3_3:73151364-73151383 | None:intergenic | 30.0% | |
| TCAAAATTACCATAATGGCA+TGG | - | chr3_3:73151365-73151384 | None:intergenic | 30.0% | |
| CGTCATCAAAATTACCATAA+TGG | - | chr3_3:73151370-73151389 | None:intergenic | 30.0% | |
| !!! | TTATGGTAATTTTGATGACG+TGG | + | chr3_3:73151370-73151389 | Msa0470960:intron | 30.0% |
| !! | TTTGATAGTGTTAACAAACC+TGG | + | chr3_3:73151709-73151728 | Msa0470960:CDS | 30.0% |
| ATCAGAAGATATGTAAGCTT+TGG | - | chr3_3:73151785-73151804 | None:intergenic | 30.0% | |
| AAAGCTTACATATCTTCTGA+TGG | + | chr3_3:73151784-73151803 | Msa0470960:CDS | 30.0% | |
| TCCCATATGAAATTTGAACA+GGG | - | chr3_3:73151885-73151904 | None:intergenic | 30.0% | |
| TGTTCAAATTTCATATGGGA+CGG | + | chr3_3:73151885-73151904 | Msa0470960:intron | 30.0% | |
| ! | ATAACTGCCAAAGTTTTCAA+CGG | - | chr3_3:73151982-73152001 | None:intergenic | 30.0% |
| CTTACATGACACATTCATAT+TGG | - | chr3_3:73152039-73152058 | None:intergenic | 30.0% | |
| ! | CAATGTTTGGTAACAAAGTT+CGG | - | chr3_3:73152233-73152252 | None:intergenic | 30.0% |
| ACACAGATATACACAATGTT+TGG | - | chr3_3:73152246-73152265 | None:intergenic | 30.0% | |
| !! | TTTTTCAATTACTCATCGCA+AGG | - | chr3_3:73152323-73152342 | None:intergenic | 30.0% |
| ! | TATGCAATGTAAAAGTATGG+TGG | + | chr3_3:73152482-73152501 | Msa0470960:intron | 30.0% |
| AACCATAGATCTCATTGAAA+AGG | + | chr3_3:73152691-73152710 | Msa0470960:CDS | 30.0% | |
| ! | TTTTTCATACAATAGGCTCT+AGG | + | chr3_3:73152891-73152910 | Msa0470960:intron | 30.0% |
| ACAAAGAAGAAGTGAAGAAT+TGG | + | chr3_3:73152928-73152947 | Msa0470960:CDS | 30.0% | |
| CATATAGCAATTGAGCTAAT+CGG | + | chr3_3:73152987-73153006 | Msa0470960:CDS | 30.0% | |
| ATATAGCAATTGAGCTAATC+GGG | + | chr3_3:73152988-73153007 | Msa0470960:CDS | 30.0% | |
| TTGTACCATCATTGACATAA+AGG | - | chr3_3:73153121-73153140 | None:intergenic | 30.0% | |
| AATTACCATAGAATGTTGTG+AGG | + | chr3_3:73153367-73153386 | Msa0470960:CDS | 30.0% | |
| ! | TTTTTCCTCACAACATTCTA+TGG | - | chr3_3:73153375-73153394 | None:intergenic | 30.0% |
| ATAGAATGTTGTGAGGAAAA+AGG | + | chr3_3:73153374-73153393 | Msa0470960:CDS | 30.0% | |
| AGTCACACATAGTACTTAAA+TGG | + | chr3_3:73153567-73153586 | Msa0470960:intron | 30.0% | |
| TTAAATGGTTCAAATGTCGA+GGG | + | chr3_3:73153582-73153601 | Msa0470960:intron | 30.0% | |
| TATAAGATAGAGGTCATGAA+AGG | + | chr3_3:73153645-73153664 | Msa0470960:intron | 30.0% | |
| ! | AGATACAGCTTTTCTCAATT+TGG | + | chr3_3:73153752-73153771 | Msa0470960:intron | 30.0% |
| AAAAGTTCTTTCACAAATCG+TGG | - | chr3_3:73154087-73154106 | None:intergenic | 30.0% | |
| TCTTAATGTCTTCTATGTGA+GGG | + | chr3_3:73154298-73154317 | Msa0470960:CDS | 30.0% | |
| ! | AGTTGATTCATTCTAACAGT+TGG | - | chr3_3:73154413-73154432 | None:intergenic | 30.0% |
| ACTTATTGCATACAGTACTT+GGG | + | chr3_3:73154440-73154459 | Msa0470960:CDS | 30.0% | |
| TGTGTTATAGTTCAGATTAG+GGG | - | chr3_3:73154536-73154555 | None:intergenic | 30.0% | |
| CTTGTGTTATAGTTCAGATT+AGG | - | chr3_3:73154538-73154557 | None:intergenic | 30.0% | |
| ! | ATCTTGTTTCTCTTGCAAAG+TGG | - | chr3_3:73148951-73148970 | None:intergenic | 35.0% |
| ATCTTTACATAAGCGTGTGT+TGG | + | chr3_3:73149241-73149260 | Msa0470960:five_prime_UTR | 35.0% | |
| AAATATACCAAAGTGGATGC+AGG | + | chr3_3:73149626-73149645 | Msa0470960:intron | 35.0% | |
| TTGCTGAAATTCTCATACTC+AGG | - | chr3_3:73149982-73150001 | None:intergenic | 35.0% | |
| AGATTAAGGTAAACCTTGGA+GGG | - | chr3_3:73150014-73150033 | None:intergenic | 35.0% | |
| AAGATTAAGGTAAACCTTGG+AGG | - | chr3_3:73150015-73150034 | None:intergenic | 35.0% | |
| !! | CGTGTGAATTTGATGGTTTT+AGG | - | chr3_3:73150092-73150111 | None:intergenic | 35.0% |
| GCATAAACGTGTGAATTTGA+TGG | - | chr3_3:73150099-73150118 | None:intergenic | 35.0% | |
| GTAGAAACTGAAGCTGAATA+AGG | - | chr3_3:73150652-73150671 | None:intergenic | 35.0% | |
| !! | AAAAGAAGTGTCCTCTTTGA+TGG | + | chr3_3:73150702-73150721 | Msa0470960:intron | 35.0% |
| CCTTGATTAGTGTACAGTTA+TGG | - | chr3_3:73150775-73150794 | None:intergenic | 35.0% | |
| CCATAACTGTACACTAATCA+AGG | + | chr3_3:73150772-73150791 | Msa0470960:CDS | 35.0% | |
| !! | TAGACTTCTAAAGTAGCTGA+TGG | - | chr3_3:73150876-73150895 | None:intergenic | 35.0% |
| ! | ATCAGCTACTTTAGAAGTCT+AGG | + | chr3_3:73150875-73150894 | Msa0470960:intron | 35.0% |
| ! | AAAAAGGATTAGCGATTGCA+GGG | - | chr3_3:73151452-73151471 | None:intergenic | 35.0% |
| ! | AAAAAAGGATTAGCGATTGC+AGG | - | chr3_3:73151451-73151470 | None:intergenic | 35.0% |
| GGAAAAAAAAATTAGCCCAG+GGG | + | chr3_3:73151324-73151343 | Msa0470960:intron | 35.0% | |
| CTTTGTAGGGGCAAAAAAAA+AGG | + | chr3_3:73151436-73151455 | Msa0470960:intron | 35.0% | |
| ! | AAAAAAGGATTAGCGATTGC+AGG | + | chr3_3:73151451-73151470 | Msa0470960:intron | 35.0% |
| ! | AAAAAGGATTAGCGATTGCA+GGG | + | chr3_3:73151452-73151471 | Msa0470960:intron | 35.0% |
| TAAAAAGTGGTACTCACAGA+GGG | - | chr3_3:73151583-73151602 | None:intergenic | 35.0% | |
| TTAAAAAGTGGTACTCACAG+AGG | - | chr3_3:73151584-73151603 | None:intergenic | 35.0% | |
| ACAAGTGGCTACTTAAAAAG+TGG | - | chr3_3:73151596-73151615 | None:intergenic | 35.0% | |
| TAACAAACCTGGAATTCTAC+TGG | + | chr3_3:73151720-73151739 | Msa0470960:CDS | 35.0% | |
| ! | CTTTGGTGATTATGAAGTCA+AGG | - | chr3_3:73151768-73151787 | None:intergenic | 35.0% |
| TGCCCTGTTCAAATTTCATA+TGG | + | chr3_3:73151880-73151899 | Msa0470960:intron | 35.0% | |
| GCCCTGTTCAAATTTCATAT+GGG | + | chr3_3:73151881-73151900 | Msa0470960:intron | 35.0% | |
| GTCCCATATGAAATTTGAAC+AGG | - | chr3_3:73151886-73151905 | None:intergenic | 35.0% | |
| GTTCAAATTTCATATGGGAC+GGG | + | chr3_3:73151886-73151905 | Msa0470960:intron | 35.0% | |
| TAATAGTCAAGAGGTGGTAA+TGG | + | chr3_3:73151953-73151972 | Msa0470960:intron | 35.0% | |
| ATGGTAACCGTTGAAAACTT+TGG | + | chr3_3:73151972-73151991 | Msa0470960:intron | 35.0% | |
| TATGAGTCATACTCACTGAT+AGG | - | chr3_3:73152074-73152093 | None:intergenic | 35.0% | |
| !!! | GCATGAGTTTTAGACGAAAA+AGG | + | chr3_3:73152378-73152397 | Msa0470960:intron | 35.0% |
| !! | GTTTTAGACGAAAAAGGAAG+AGG | + | chr3_3:73152384-73152403 | Msa0470960:intron | 35.0% |
| ! | AGAGTGTTAAAGTGTGGTAT+TGG | - | chr3_3:73152410-73152429 | None:intergenic | 35.0% |
| CACACAATCACACACATTTA+TGG | + | chr3_3:73152547-73152566 | Msa0470960:intron | 35.0% | |
| ! | CACCTTTTCAATGAGATCTA+TGG | - | chr3_3:73152696-73152715 | None:intergenic | 35.0% |
| TGGAAGACTCAAATTCATTG+CGG | + | chr3_3:73152791-73152810 | Msa0470960:intron | 35.0% | |
| !!! | TCTTCTTTGTTCTGGCTTTT+TGG | - | chr3_3:73152918-73152937 | None:intergenic | 35.0% |
| TCTTCACTTCTTCTTTGTTC+TGG | - | chr3_3:73152926-73152945 | None:intergenic | 35.0% | |
| TGTGTCCTTTATGTCAATGA+TGG | + | chr3_3:73153113-73153132 | Msa0470960:CDS | 35.0% | |
| ! | CAGCTCAATAACATTTTACG+TGG | + | chr3_3:73153185-73153204 | Msa0470960:CDS | 35.0% |
| ! | TAACATTTTACGTGGATGTG+AGG | + | chr3_3:73153193-73153212 | Msa0470960:CDS | 35.0% |
| ATCAATATGGGTGAAACTCA+TGG | - | chr3_3:73153252-73153271 | None:intergenic | 35.0% | |
| TGAGTTTCACCCATATTGAT+AGG | + | chr3_3:73153252-73153271 | Msa0470960:CDS | 35.0% | |
| ! | ACCAAATGTTGTTTGCTGAT+CGG | + | chr3_3:73153282-73153301 | Msa0470960:CDS | 35.0% |
| GATCGGGATTATGAAAGTTA+TGG | + | chr3_3:73153299-73153318 | Msa0470960:CDS | 35.0% | |
| ! | ATTCTATGGTAATTTTCGGC+CGG | - | chr3_3:73153361-73153380 | None:intergenic | 35.0% |
| TTGTGAGGAAAAAGGATACT+CGG | + | chr3_3:73153382-73153401 | Msa0470960:CDS | 35.0% | |
| CTTAAATGGTTCAAATGTCG+AGG | + | chr3_3:73153581-73153600 | Msa0470960:intron | 35.0% | |
| GGAGGATTTGTGTATTCAAA+TGG | + | chr3_3:73153673-73153692 | Msa0470960:intron | 35.0% | |
| ATATGAAGACTTGAGGAATG+TGG | + | chr3_3:73153889-73153908 | Msa0470960:intron | 35.0% | |
| AATGTTGATCGTGTACCTTT+AGG | + | chr3_3:73153917-73153936 | Msa0470960:intron | 35.0% | |
| ! | GCCGAATAAAGTATTCCTAA+AGG | - | chr3_3:73153935-73153954 | None:intergenic | 35.0% |
| TATTCAAAGAAGAGTAAGCG+AGG | + | chr3_3:73154022-73154041 | Msa0470960:CDS | 35.0% | |
| ! | ACAAGAATTCTGAGAGAGAA+TGG | + | chr3_3:73154230-73154249 | Msa0470960:CDS | 35.0% |
| CTCTTAATGTCTTCTATGTG+AGG | + | chr3_3:73154297-73154316 | Msa0470960:CDS | 35.0% | |
| ! | GAAGCACTTCGTAAAGAAAT+CGG | + | chr3_3:73154356-73154375 | Msa0470960:CDS | 35.0% |
| AGAAATCGGTAAGACAATGA+TGG | + | chr3_3:73154370-73154389 | Msa0470960:CDS | 35.0% | |
| AATGATGGTAGATGTGAAGA+AGG | + | chr3_3:73154385-73154404 | Msa0470960:CDS | 35.0% | |
| CACTTATTGCATACAGTACT+TGG | + | chr3_3:73154439-73154458 | Msa0470960:CDS | 35.0% | |
| TTTCTCTTGCAAAGTGGTGT+GGG | - | chr3_3:73148945-73148964 | None:intergenic | 40.0% | |
| AGATTCTCTACTTTCGACGT+TGG | - | chr3_3:73149046-73149065 | None:intergenic | 40.0% | |
| TGGAGAGTGATACTGATAGA+GGG | - | chr3_3:73149184-73149203 | None:intergenic | 40.0% | |
| TTGGAGAGTGATACTGATAG+AGG | - | chr3_3:73149185-73149204 | None:intergenic | 40.0% | |
| ! | TTTTGTTCCTGCATCCACTT+TGG | - | chr3_3:73149636-73149655 | None:intergenic | 40.0% |
| ! | TTCTCATTGACTAGAGAAGC+TGG | + | chr3_3:73149921-73149940 | Msa0470960:five_prime_UTR | 40.0% |
| ACTAGAGAAGCTGGTTAGAA+TGG | + | chr3_3:73149930-73149949 | Msa0470960:exon | 40.0% | |
| TTAGAATGGCTGCAGTTTGT+TGG | + | chr3_3:73149944-73149963 | Msa0470960:exon | 40.0% | |
| GAGTGAGACACTACATATGT+TGG | - | chr3_3:73150185-73150204 | None:intergenic | 40.0% | |
| GTTAAAAGGAGATCGGAGTT+GGG | - | chr3_3:73150498-73150517 | None:intergenic | 40.0% | |
| TGTTAAAAGGAGATCGGAGT+TGG | - | chr3_3:73150499-73150518 | None:intergenic | 40.0% | |
| CCAAACCACAACTCATATAG+AGG | - | chr3_3:73150853-73150872 | None:intergenic | 40.0% | |
| CCTCTATATGAGTTGTGGTT+TGG | + | chr3_3:73150850-73150869 | Msa0470960:intron | 40.0% | |
| TGTTATTCGTCCCTGCAAAT+AGG | + | chr3_3:73150961-73150980 | Msa0470960:intron | 40.0% | |
| GTTATTCGTCCCTGCAAATA+GGG | + | chr3_3:73150962-73150981 | Msa0470960:intron | 40.0% | |
| TTATTCGTCCCTGCAAATAG+GGG | + | chr3_3:73150963-73150982 | Msa0470960:intron | 40.0% | |
| TTAAACGACCCCTATTTGCA+GGG | - | chr3_3:73150974-73150993 | None:intergenic | 40.0% | |
| TTTAAACGACCCCTATTTGC+AGG | - | chr3_3:73150975-73150994 | None:intergenic | 40.0% | |
| CTTTGCAGGGGCAAAAAAAA+AGG | - | chr3_3:73151021-73151040 | None:intergenic | 40.0% | |
| GAATTGACGAAAATACCCCT+GGG | - | chr3_3:73151114-73151133 | None:intergenic | 40.0% | |
| ! | GCAGTCATTAACTTGGTCAA+GGG | + | chr3_3:73151392-73151411 | Msa0470960:intron | 40.0% |
| TTATTCGTCCCTGCAAATAG+GGG | - | chr3_3:73150963-73150982 | None:intergenic | 40.0% | |
| GTTATTCGTCCCTGCAAATA+GGG | - | chr3_3:73150962-73150981 | None:intergenic | 40.0% | |
| TGTTATTCGTCCCTGCAAAT+AGG | - | chr3_3:73150961-73150980 | None:intergenic | 40.0% | |
| GCTTACATATCTTCTGATGG+AGG | + | chr3_3:73151787-73151806 | Msa0470960:CDS | 40.0% | |
| ACATATCTTCTGATGGAGGA+TGG | + | chr3_3:73151791-73151810 | Msa0470960:CDS | 40.0% | |
| AAATTTCATATGGGACGGGA+CGG | + | chr3_3:73151890-73151909 | Msa0470960:intron | 40.0% | |
| CTCATAGTGCAGTACAGTTT+AGG | + | chr3_3:73152088-73152107 | Msa0470960:intron | 40.0% | |
| AGGTATTAAAACAGCACTCC+CGG | - | chr3_3:73152303-73152322 | None:intergenic | 40.0% | |
| TTGGGTGAATGAATCAGTCT+AGG | + | chr3_3:73152436-73152455 | Msa0470960:intron | 40.0% | |
| TGTGTTTGAAAAGAGAGAGC+AGG | - | chr3_3:73152531-73152550 | None:intergenic | 40.0% | |
| TTTCATGTCACGGATCAACA+AGG | + | chr3_3:73152647-73152666 | Msa0470960:CDS | 40.0% | |
| TTCATGTCACGGATCAACAA+GGG | + | chr3_3:73152648-73152667 | Msa0470960:CDS | 40.0% | |
| GTTTCTATCTAACTACCACG+TGG | + | chr3_3:73152771-73152790 | Msa0470960:intron | 40.0% | |
| ATGAATTTGAGTCTTCCACG+TGG | - | chr3_3:73152789-73152808 | None:intergenic | 40.0% | |
| GAAGAAGTGAAGAATTGGTC+AGG | + | chr3_3:73152933-73152952 | Msa0470960:CDS | 40.0% | |
| TGAAGAATTGGTCAGGCAAA+TGG | + | chr3_3:73152940-73152959 | Msa0470960:CDS | 40.0% | |
| GAAGAATTGGTCAGGCAAAT+GGG | + | chr3_3:73152941-73152960 | Msa0470960:CDS | 40.0% | |
| ATATCTCAGACAAGAGACCA+GGG | - | chr3_3:73153022-73153041 | None:intergenic | 40.0% | |
| CTACAACCACGTTAAAATGG+AGG | - | chr3_3:73153061-73153080 | None:intergenic | 40.0% | |
| CAGCTACAACCACGTTAAAA+TGG | - | chr3_3:73153064-73153083 | None:intergenic | 40.0% | |
| ! | ATTTTACGTGGATGTGAGGA+TGG | + | chr3_3:73153197-73153216 | Msa0470960:CDS | 40.0% |
| ATGGAGAGAAAGTTGCTAGT+AGG | + | chr3_3:73153216-73153235 | Msa0470960:CDS | 40.0% | |
| GTTTCACCCATATTGATAGG+CGG | + | chr3_3:73153255-73153274 | Msa0470960:CDS | 40.0% | |
| GATCAGCAAACAACATTTGG+TGG | - | chr3_3:73153283-73153302 | None:intergenic | 40.0% | |
| ! | CCAAATGTTGTTTGCTGATC+GGG | + | chr3_3:73153283-73153302 | Msa0470960:CDS | 40.0% |
| GTGACTGATAAGTGAACATG+CGG | - | chr3_3:73153553-73153572 | None:intergenic | 40.0% | |
| GGAATACTTTATTCGGCACA+TGG | + | chr3_3:73153938-73153957 | Msa0470960:intron | 40.0% | |
| TACTTTATTCGGCACATGGA+CGG | + | chr3_3:73153942-73153961 | Msa0470960:CDS | 40.0% | |
| GATGCACACTTGATACAGAA+GGG | + | chr3_3:73153964-73153983 | Msa0470960:CDS | 40.0% | |
| ATGCACACTTGATACAGAAG+GGG | + | chr3_3:73153965-73153984 | Msa0470960:CDS | 40.0% | |
| ATACAGAAGGGGAGAAAGAA+AGG | + | chr3_3:73153976-73153995 | Msa0470960:CDS | 40.0% | |
| TACAGAAGGGGAGAAAGAAA+GGG | + | chr3_3:73153977-73153996 | Msa0470960:CDS | 40.0% | |
| ! | ATTCTACGGATTTTGGACAC+AGG | + | chr3_3:73154154-73154173 | Msa0470960:intron | 40.0% |
| ! | TTCTACGGATTTTGGACACA+GGG | + | chr3_3:73154155-73154174 | Msa0470960:intron | 40.0% |
| TATCCTTTGCACACAACTCT+AGG | - | chr3_3:73154187-73154206 | None:intergenic | 40.0% | |
| TTGTGTGCAAAGGATAGAGT+GGG | + | chr3_3:73154191-73154210 | Msa0470960:CDS | 40.0% | |
| AGAATGGCCTAACAGTTTGT+AGG | + | chr3_3:73154246-73154265 | Msa0470960:CDS | 40.0% | |
| GAATGGCCTAACAGTTTGTA+GGG | + | chr3_3:73154247-73154266 | Msa0470960:CDS | 40.0% | |
| CACAAGCAAACTTGTAACGT+TGG | - | chr3_3:73154476-73154495 | None:intergenic | 40.0% | |
| GTTATAGTTCAGATTAGGGG+AGG | - | chr3_3:73154533-73154552 | None:intergenic | 40.0% | |
| GTTTCTCTTGCAAAGTGGTG+TGG | - | chr3_3:73148946-73148965 | None:intergenic | 45.0% | |
| ! | AATCTGCATCTGAGACACAC+AGG | + | chr3_3:73149061-73149080 | Msa0470960:five_prime_UTR | 45.0% |
| !! | CAATGATGGACATGGAAGCT+TGG | - | chr3_3:73149204-73149223 | None:intergenic | 45.0% |
| GCAACAAAATCAACCCTCCA+AGG | + | chr3_3:73149998-73150017 | Msa0470960:CDS | 45.0% | |
| TCGGAGTTGGGTAGGTAAAT+TGG | - | chr3_3:73150486-73150505 | None:intergenic | 45.0% | |
| ATGGCAACTAGCATTGTCCA+CGG | - | chr3_3:73150756-73150775 | None:intergenic | 45.0% | |
| CACAACTCATATAGAGGCCA+TGG | - | chr3_3:73150847-73150866 | None:intergenic | 45.0% | |
| CATGGCCTCTATATGAGTTG+TGG | + | chr3_3:73150845-73150864 | Msa0470960:intron | 45.0% | |
| ! | GCAGTCGTTAACTTGGTCAA+TGG | - | chr3_3:73151065-73151084 | None:intergenic | 45.0% |
| GGAATTGACGAAAATACCCC+TGG | + | chr3_3:73151113-73151132 | Msa0470960:intron | 45.0% | |
| GGAATTGACGAAAATACCCC+TGG | - | chr3_3:73151113-73151132 | None:intergenic | 45.0% | |
| CGTCAATTCCCATGCCATTA+TGG | + | chr3_3:73151353-73151372 | Msa0470960:intron | 45.0% | |
| TGACGTGGCAGTCATTAACT+TGG | + | chr3_3:73151385-73151404 | Msa0470960:intron | 45.0% | |
| ! | GGCAGTCATTAACTTGGTCA+AGG | + | chr3_3:73151391-73151410 | Msa0470960:intron | 45.0% |
| TTTAAGCGACCCCTATTTGC+AGG | + | chr3_3:73151482-73151501 | Msa0470960:intron | 45.0% | |
| TTAAGCGACCCCTATTTGCA+GGG | + | chr3_3:73151483-73151502 | Msa0470960:intron | 45.0% | |
| GGAGCAATGTGACAAACAAG+TGG | - | chr3_3:73151611-73151630 | None:intergenic | 45.0% | |
| ACCTGGAATTCTACTGGAAG+TGG | + | chr3_3:73151726-73151745 | Msa0470960:CDS | 45.0% | |
| ACCACTTCCAGTAGAATTCC+AGG | - | chr3_3:73151730-73151749 | None:intergenic | 45.0% | |
| TTCTGATGGAGGATGGTTCA+TGG | + | chr3_3:73151798-73151817 | Msa0470960:CDS | 45.0% | |
| AATTGGTCAGGCAAATGGGT+TGG | + | chr3_3:73152945-73152964 | Msa0470960:CDS | 45.0% | |
| ! | ATTGGTCAGGCAAATGGGTT+GGG | + | chr3_3:73152946-73152965 | Msa0470960:CDS | 45.0% |
| GATATCTCAGACAAGAGACC+AGG | - | chr3_3:73153023-73153042 | None:intergenic | 45.0% | |
| AACCACGTTAAAATGGAGGC+TGG | - | chr3_3:73153057-73153076 | None:intergenic | 45.0% | |
| CTGAAGTGTGGACTCATAAC+AGG | + | chr3_3:73153081-73153100 | Msa0470960:CDS | 45.0% | |
| GGTGAAACTCATGGACAAAC+TGG | - | chr3_3:73153243-73153262 | None:intergenic | 45.0% | |
| CCCGATCAGCAAACAACATT+TGG | - | chr3_3:73153286-73153305 | None:intergenic | 45.0% | |
| ATGGAGTAACGACAACAGAC+AGG | + | chr3_3:73153318-73153337 | Msa0470960:CDS | 45.0% | |
| TGGAGTAACGACAACAGACA+GGG | + | chr3_3:73153319-73153338 | Msa0470960:CDS | 45.0% | |
| ! | GTAATTTTCGGCCGGAAAGA+GGG | - | chr3_3:73153353-73153372 | None:intergenic | 45.0% |
| TGAGGAAAAAGGATACTCGG+TGG | + | chr3_3:73153385-73153404 | Msa0470960:CDS | 45.0% | |
| TTCCCATGCCACAATCTCAT+CGG | + | chr3_3:73153484-73153503 | Msa0470960:CDS | 45.0% | |
| ATCCGATGAGATTGTGGCAT+GGG | - | chr3_3:73153489-73153508 | None:intergenic | 45.0% | |
| GATGTACCTGCGATGCATAA+GGG | - | chr3_3:73153514-73153533 | None:intergenic | 45.0% | |
| TGATGTACCTGCGATGCATA+AGG | - | chr3_3:73153515-73153534 | None:intergenic | 45.0% | |
| TAGAGGTCATGAAAGGCTTG+TGG | + | chr3_3:73153652-73153671 | Msa0470960:intron | 45.0% | |
| GGATGCACACTTGATACAGA+AGG | + | chr3_3:73153963-73153982 | Msa0470960:CDS | 45.0% | |
| GTTGTGTGCAAAGGATAGAG+TGG | + | chr3_3:73154190-73154209 | Msa0470960:CDS | 45.0% | |
| TACCTGCCCTACAAACTGTT+AGG | - | chr3_3:73154256-73154275 | None:intergenic | 45.0% | |
| ! | ATTAAGAGCTTGTTCCCCTC+TGG | - | chr3_3:73154285-73154304 | None:intergenic | 45.0% |
| TTCTATGTGAGGGATGCATC+AGG | + | chr3_3:73154308-73154327 | Msa0470960:CDS | 45.0% | |
| TCTATGTGAGGGATGCATCA+GGG | + | chr3_3:73154309-73154328 | Msa0470960:CDS | 45.0% | |
| GCTTGCATTTGTTTGCTCTC+TGG | - | chr3_3:73154574-73154593 | None:intergenic | 45.0% | |
| !!! | TTTATTTTATTTTTGAAATA+CGG | + | chr3_3:73150331-73150350 | Msa0470960:intron | 5.0% |
| !! | TTAAAATTAAAATGTTTAAT+TGG | + | chr3_3:73150616-73150635 | Msa0470960:intron | 5.0% |
| !! | ATTAAAAGTAAAAAAAAATT+CGG | - | chr3_3:73151247-73151266 | None:intergenic | 5.0% |
| AAAGGAGATCGGAGTTGGGT+AGG | - | chr3_3:73150494-73150513 | None:intergenic | 50.0% | |
| TGACGTGGCAGTCGTTAACT+TGG | - | chr3_3:73151072-73151091 | None:intergenic | 50.0% | |
| GATGGAGGATGGTTCATGGA+TGG | + | chr3_3:73151802-73151821 | Msa0470960:CDS | 50.0% | |
| TGACCACATCTCCGACTACA+GGG | - | chr3_3:73152203-73152222 | None:intergenic | 50.0% | |
| !! | TTGGTCAGGCAAATGGGTTG+GGG | + | chr3_3:73152947-73152966 | Msa0470960:CDS | 50.0% |
| CGTTAAAATGGAGGCTGGCA+AGG | - | chr3_3:73153052-73153071 | None:intergenic | 50.0% | |
| !! | TGCCAGCCTCCATTTTAACG+TGG | + | chr3_3:73153052-73153071 | Msa0470960:CDS | 50.0% |
| ACGTGGTTGTAGCTGAAGTG+TGG | + | chr3_3:73153069-73153088 | Msa0470960:CDS | 50.0% | |
| TGATGGTACAAGACAAGCCG+TGG | + | chr3_3:73153130-73153149 | Msa0470960:CDS | 50.0% | |
| GTGGAGCCGCCTATCAATAT+GGG | - | chr3_3:73153264-73153283 | None:intergenic | 50.0% | |
| ! | GGTAATTTTCGGCCGGAAAG+AGG | - | chr3_3:73153354-73153373 | None:intergenic | 50.0% |
| GATCCGATGAGATTGTGGCA+TGG | - | chr3_3:73153490-73153509 | None:intergenic | 50.0% | |
| AGGTCATGAAAGGCTTGTGG+AGG | + | chr3_3:73153655-73153674 | Msa0470960:intron | 50.0% | |
| GAGCCTAGAGTTGTGTGCAA+AGG | + | chr3_3:73154181-73154200 | Msa0470960:CDS | 50.0% | |
| AGGGCAGGTATATCAACCAG+AGG | + | chr3_3:73154266-73154285 | Msa0470960:CDS | 50.0% | |
| GGGCAGGTATATCAACCAGA+GGG | + | chr3_3:73154267-73154286 | Msa0470960:CDS | 50.0% | |
| GGCAGGTATATCAACCAGAG+GGG | + | chr3_3:73154268-73154287 | Msa0470960:CDS | 50.0% | |
| TTGCAAAGTGGTGTGGGCGT+GGG | - | chr3_3:73148939-73148958 | None:intergenic | 55.0% | |
| TGTACTTTGCAGGGTCTCCG+TGG | + | chr3_3:73150736-73150755 | Msa0470960:intron | 55.0% | |
| TGGTACTCACAGAGGGCTAG+TGG | - | chr3_3:73151576-73151595 | None:intergenic | 55.0% | |
| GGGACGGGACGGTTGTAAAA+TGG | + | chr3_3:73151901-73151920 | Msa0470960:intron | 55.0% | |
| GTGACCACATCTCCGACTAC+AGG | - | chr3_3:73152204-73152223 | None:intergenic | 55.0% | |
| ! | TGGGTTGGGGTGCATTCTGT+TGG | + | chr3_3:73152960-73152979 | Msa0470960:CDS | 55.0% |
| TCTCAGACAAGAGACCAGGG+CGG | - | chr3_3:73153019-73153038 | None:intergenic | 55.0% | |
| GGTGGAGCCGCCTATCAATA+TGG | - | chr3_3:73153265-73153284 | None:intergenic | 55.0% | |
| GGGAATGTCCTCCCTCTTTC+CGG | + | chr3_3:73153339-73153358 | Msa0470960:CDS | 55.0% | |
| ! | ATTTTCGGCCGGAAAGAGGG+AGG | - | chr3_3:73153350-73153369 | None:intergenic | 55.0% |
| AGGGCGATCCGATGAGATTG+TGG | - | chr3_3:73153495-73153514 | None:intergenic | 55.0% | |
| GGCCTAACAGTTTGTAGGGC+AGG | + | chr3_3:73154251-73154270 | Msa0470960:CDS | 55.0% | |
| GGATGCATCAGGGAACTCAG+TGG | + | chr3_3:73154319-73154338 | Msa0470960:CDS | 55.0% | |
| TGTGGGCGTGGGCTTAATGG+TGG | - | chr3_3:73148928-73148947 | None:intergenic | 60.0% | |
| TGGTGTGGGCGTGGGCTTAA+TGG | - | chr3_3:73148931-73148950 | None:intergenic | 60.0% | |
| CTTGCAAAGTGGTGTGGGCG+TGG | - | chr3_3:73148940-73148959 | None:intergenic | 60.0% | |
| AGTTGTGGCCGCCCTGTAGT+CGG | + | chr3_3:73152189-73152208 | Msa0470960:intron | 60.0% | |
| CCACATCTCCGACTACAGGG+CGG | - | chr3_3:73152200-73152219 | None:intergenic | 60.0% | |
| GGATCGCCCTTATGCATCGC+AGG | + | chr3_3:73153505-73153524 | Msa0470960:CDS | 60.0% | |
| CCGCCCTGTAGTCGGAGATG+TGG | + | chr3_3:73152197-73152216 | Msa0470960:intron | 65.0% | |
| CTAATCGGGAGAGACCGCCC+TGG | + | chr3_3:73153002-73153021 | Msa0470960:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 73148871 | 73154607 | 73148871 | ID=Msa0470960;Name=Msa0470960 |
| chr3_3 | mRNA | 73148871 | 73154607 | 73148871 | ID=Msa0470960-mRNA-1;Parent=Msa0470960;Name=Msa0470960-mRNA-1;_AED=0.12;_eAED=0.12;_QI=363|1|1|1|0.75|0.66|9|135|440 |
| chr3_3 | exon | 73148871 | 73149082 | 73148871 | ID=Msa0470960-mRNA-1:exon:18494;Parent=Msa0470960-mRNA-1 |
| chr3_3 | exon | 73149192 | 73149295 | 73149192 | ID=Msa0470960-mRNA-1:exon:18495;Parent=Msa0470960-mRNA-1 |
| chr3_3 | exon | 73149902 | 73150019 | 73149902 | ID=Msa0470960-mRNA-1:exon:18496;Parent=Msa0470960-mRNA-1 |
| chr3_3 | exon | 73150748 | 73150793 | 73150748 | ID=Msa0470960-mRNA-1:exon:18497;Parent=Msa0470960-mRNA-1 |
| chr3_3 | exon | 73151709 | 73151823 | 73151709 | ID=Msa0470960-mRNA-1:exon:18498;Parent=Msa0470960-mRNA-1 |
| chr3_3 | exon | 73152645 | 73152712 | 73152645 | ID=Msa0470960-mRNA-1:exon:18499;Parent=Msa0470960-mRNA-1 |
| chr3_3 | exon | 73152906 | 73153526 | 73152906 | ID=Msa0470960-mRNA-1:exon:18500;Parent=Msa0470960-mRNA-1 |
| chr3_3 | exon | 73153939 | 73154043 | 73153939 | ID=Msa0470960-mRNA-1:exon:18501;Parent=Msa0470960-mRNA-1 |
| chr3_3 | exon | 73154176 | 73154607 | 73154176 | ID=Msa0470960-mRNA-1:exon:18502;Parent=Msa0470960-mRNA-1 |
| chr3_3 | five_prime_UTR | 73148871 | 73149082 | 73148871 | ID=Msa0470960-mRNA-1:five_prime_utr;Parent=Msa0470960-mRNA-1 |
| chr3_3 | five_prime_UTR | 73149192 | 73149295 | 73149192 | ID=Msa0470960-mRNA-1:five_prime_utr;Parent=Msa0470960-mRNA-1 |
| chr3_3 | five_prime_UTR | 73149902 | 73149948 | 73149902 | ID=Msa0470960-mRNA-1:five_prime_utr;Parent=Msa0470960-mRNA-1 |
| chr3_3 | CDS | 73149949 | 73150019 | 73149949 | ID=Msa0470960-mRNA-1:cds;Parent=Msa0470960-mRNA-1 |
| chr3_3 | CDS | 73150748 | 73150793 | 73150748 | ID=Msa0470960-mRNA-1:cds;Parent=Msa0470960-mRNA-1 |
| chr3_3 | CDS | 73151709 | 73151823 | 73151709 | ID=Msa0470960-mRNA-1:cds;Parent=Msa0470960-mRNA-1 |
| chr3_3 | CDS | 73152645 | 73152712 | 73152645 | ID=Msa0470960-mRNA-1:cds;Parent=Msa0470960-mRNA-1 |
| chr3_3 | CDS | 73152906 | 73153526 | 73152906 | ID=Msa0470960-mRNA-1:cds;Parent=Msa0470960-mRNA-1 |
| chr3_3 | CDS | 73153939 | 73154043 | 73153939 | ID=Msa0470960-mRNA-1:cds;Parent=Msa0470960-mRNA-1 |
| chr3_3 | CDS | 73154176 | 73154472 | 73154176 | ID=Msa0470960-mRNA-1:cds;Parent=Msa0470960-mRNA-1 |
| chr3_3 | three_prime_UTR | 73154473 | 73154607 | 73154473 | ID=Msa0470960-mRNA-1:three_prime_utr;Parent=Msa0470960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
