Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374750 | XP_013461355.1 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374750 | sp|O49285|ACR3_ARATH | 73.128 | 454 | 112 | 5 | 1 | 446 | 1 | 452 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374750 | A0A072VB68 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025730 | Msa0374750 | 0.812833 | 3.474149e-51 | -8.615850e-47 |
| Msa0052640 | Msa0374750 | 0.817926 | 2.559329e-52 | -8.615850e-47 |
| Msa0052770 | Msa0374750 | 0.834103 | 3.637856e-56 | -8.615850e-47 |
| Msa0084940 | Msa0374750 | 0.806675 | 7.330466e-50 | -8.615850e-47 |
| Msa0097780 | Msa0374750 | 0.815844 | 7.506142e-52 | -8.615850e-47 |
| Msa0115270 | Msa0374750 | 0.800938 | 1.139594e-48 | -8.615850e-47 |
| Msa0180500 | Msa0374750 | 0.801528 | 8.629868e-49 | -8.615850e-47 |
| Msa0369050 | Msa0374750 | 0.806850 | 6.732444e-50 | -8.615850e-47 |
| Msa0374750 | Msa0388050 | 0.812660 | 3.791220e-51 | -8.615850e-47 |
| Msa0374750 | Msa0402790 | 0.839078 | 1.964677e-57 | -8.615850e-47 |
| Msa0374750 | Msa0416300 | 0.805363 | 1.384125e-49 | -8.615850e-47 |
| Msa0374750 | Msa0416650 | 0.808722 | 2.693412e-50 | -8.615850e-47 |
| Msa0374750 | Msa0424040 | 0.901964 | 1.571122e-78 | -8.615850e-47 |
| Msa0374750 | Msa0442190 | 0.831549 | 1.567527e-55 | -8.615850e-47 |
| Msa0374750 | Msa0470960 | 0.864550 | 1.121412e-64 | -8.615850e-47 |
| Msa0374750 | Msa0481530 | 0.806700 | 7.244132e-50 | -8.615850e-47 |
| Msa0374750 | Msa0500360 | 0.803180 | 3.942038e-49 | -8.615850e-47 |
| Msa0374750 | Msa0509390 | 0.811006 | 8.687624e-51 | -8.615850e-47 |
| Msa0374750 | Msa0519000 | 0.800101 | 1.687919e-48 | -8.615850e-47 |
| Msa0374750 | Msa0593650 | 0.816268 | 6.037575e-52 | -8.615850e-47 |
| Msa0374750 | Msa0610430 | 0.806727 | 7.149334e-50 | -8.615850e-47 |
| Msa0374750 | Msa0632870 | 0.813136 | 2.981237e-51 | -8.615850e-47 |
| Msa0374750 | Msa0656530 | 0.812700 | 3.716323e-51 | -8.615850e-47 |
| Msa0374750 | Msa0661190 | -0.803070 | 4.155353e-49 | -8.615850e-47 |
| Msa0374750 | Msa0692830 | 0.826361 | 2.829607e-54 | -8.615850e-47 |
| Msa0374750 | Msa0692950 | 0.812556 | 3.994902e-51 | -8.615850e-47 |
| Msa0374750 | Msa0743720 | 0.825771 | 3.907720e-54 | -8.615850e-47 |
| Msa0374750 | Msa0771720 | 0.814236 | 1.707750e-51 | -8.615850e-47 |
| Msa0374750 | Msa0777230 | 0.806320 | 8.712644e-50 | -8.615850e-47 |
| Msa0374750 | Msa0813720 | 0.802977 | 4.341498e-49 | -8.615850e-47 |
| Msa0374750 | Msa0849030 | 0.804713 | 1.892962e-49 | -8.615850e-47 |
| Msa0374750 | Msa0866550 | 0.809654 | 1.700484e-50 | -8.615850e-47 |
| Msa0374750 | Msa0982430 | 0.989147 | 6.889325e-177 | -8.615850e-47 |
| Msa0374750 | Msa1012830 | 0.809107 | 2.227941e-50 | -8.615850e-47 |
| Msa0374750 | Msa1014540 | 0.802379 | 5.769834e-49 | -8.615850e-47 |
| Msa0374750 | Msa1021540 | 0.800213 | 1.601419e-48 | -8.615850e-47 |
| Msa0374750 | Msa1037420 | 0.807104 | 5.949293e-50 | -8.615850e-47 |
| Msa0374750 | Msa1046060 | 0.805327 | 1.408483e-49 | -8.615850e-47 |
| Msa0374750 | Msa1051200 | 0.823930 | 1.062331e-53 | -8.615850e-47 |
| Msa0374750 | Msa1137700 | 0.800132 | 1.663060e-48 | -8.615850e-47 |
| Msa0374750 | Msa1171870 | 0.800489 | 1.406949e-48 | -8.615850e-47 |
| Msa0374750 | Msa1173140 | 0.831505 | 1.607175e-55 | -8.615850e-47 |
| Msa0374750 | Msa1174040 | 0.800275 | 1.555757e-48 | -8.615850e-47 |
| Msa0374750 | Msa1181250 | 0.807271 | 5.485128e-50 | -8.615850e-47 |
| Msa0374750 | Msa1181850 | 0.802307 | 5.970838e-49 | -8.615850e-47 |
| Msa0374750 | Msa1233890 | 0.813631 | 2.320870e-51 | -8.615850e-47 |
| Msa0374750 | Msa1275360 | 0.803530 | 3.336128e-49 | -8.615850e-47 |
| Msa0374750 | Msa1306760 | 0.807263 | 5.504560e-50 | -8.615850e-47 |
| Msa0374750 | Msa1386780 | 0.813430 | 2.569471e-51 | -8.615850e-47 |
| Msa0374750 | Msa1390180 | 0.803970 | 2.703321e-49 | -8.615850e-47 |
| Msa0374750 | Msa1427230 | 0.818293 | 2.114588e-52 | -8.615850e-47 |
| Msa0374750 | Msa1435370 | 0.810728 | 9.976393e-51 | -8.615850e-47 |
| Msa0374750 | Msa1440000 | 0.814354 | 1.607711e-51 | -8.615850e-47 |
| Msa0374750 | Msa1440910 | 0.805903 | 1.066401e-49 | -8.615850e-47 |
| Msa0374750 | Msa1460830 | 0.812635 | 3.838617e-51 | -8.615850e-47 |
| Msa0255080 | Msa0374750 | 0.827341 | 1.650689e-54 | -8.615850e-47 |
| Msa0259370 | Msa0374750 | 0.825037 | 5.832399e-54 | -8.615850e-47 |
| Msa0279790 | Msa0374750 | 0.815560 | 8.683860e-52 | -8.615850e-47 |
| Msa0288100 | Msa0374750 | 0.812580 | 3.947065e-51 | -8.615850e-47 |
| Msa0298700 | Msa0374750 | 0.811886 | 5.593082e-51 | -8.615850e-47 |
| Msa0309770 | Msa0374750 | 0.815120 | 1.087838e-51 | -8.615850e-47 |
| Msa0350990 | Msa0374750 | 0.800709 | 1.269217e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374750 | MtrunA17_Chr3g0125661 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| Msa0374750 | MtrunA17_Chr1g0159541 | 81.718 | 454 | 74 | 6 | 1 | 446 | 1 | 453 | 0.0 | 754 |
| Msa0374750 | MtrunA17_Chr7g0222461 | 53.499 | 443 | 190 | 9 | 9 | 446 | 10 | 441 | 1.69e-154 | 445 |
| Msa0374750 | MtrunA17_Chr5g0420221 | 55.314 | 414 | 173 | 5 | 8 | 420 | 16 | 418 | 3.18e-154 | 445 |
| Msa0374750 | MtrunA17_Chr7g0224571 | 49.095 | 442 | 213 | 7 | 9 | 445 | 1 | 435 | 4.04e-141 | 411 |
| Msa0374750 | MtrunA17_Chr4g0056741 | 49.519 | 416 | 190 | 6 | 6 | 420 | 3 | 399 | 1.52e-133 | 392 |
| Msa0374750 | MtrunA17_Chr5g0398581 | 45.982 | 448 | 216 | 7 | 6 | 446 | 3 | 431 | 2.96e-130 | 383 |
| Msa0374750 | MtrunA17_Chr5g0400941 | 45.727 | 433 | 213 | 9 | 1 | 414 | 1 | 430 | 1.94e-126 | 375 |
| Msa0374750 | MtrunA17_Chr4g0054261 | 40.421 | 428 | 234 | 6 | 7 | 414 | 26 | 452 | 1.23e-108 | 330 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374750 | AT1G76990.4 | 73.128 | 454 | 112 | 5 | 1 | 446 | 1 | 452 | 0.0 | 681 |
| Msa0374750 | AT1G76990.5 | 73.128 | 454 | 112 | 5 | 1 | 446 | 1 | 452 | 0.0 | 681 |
| Msa0374750 | AT1G76990.2 | 73.128 | 454 | 112 | 5 | 1 | 446 | 1 | 452 | 0.0 | 681 |
| Msa0374750 | AT1G76990.3 | 73.128 | 454 | 112 | 5 | 1 | 446 | 1 | 452 | 0.0 | 681 |
| Msa0374750 | AT1G76990.1 | 73.128 | 454 | 112 | 5 | 1 | 446 | 1 | 452 | 0.0 | 681 |
| Msa0374750 | AT1G69040.2 | 51.826 | 438 | 201 | 5 | 9 | 443 | 11 | 441 | 1.01e-147 | 429 |
| Msa0374750 | AT1G69040.1 | 51.826 | 438 | 201 | 5 | 9 | 443 | 7 | 437 | 1.48e-147 | 428 |
| Msa0374750 | AT2G03730.2 | 49.777 | 448 | 214 | 7 | 4 | 444 | 3 | 446 | 1.25e-143 | 418 |
| Msa0374750 | AT2G03730.1 | 49.777 | 448 | 214 | 7 | 4 | 444 | 3 | 446 | 1.25e-143 | 418 |
| Msa0374750 | AT5G25320.1 | 47.682 | 453 | 204 | 9 | 1 | 421 | 1 | 452 | 1.11e-142 | 417 |
| Msa0374750 | AT3G01990.7 | 51.358 | 405 | 178 | 8 | 10 | 409 | 17 | 407 | 4.52e-135 | 396 |
| Msa0374750 | AT3G01990.5 | 51.358 | 405 | 178 | 8 | 10 | 409 | 17 | 407 | 4.52e-135 | 396 |
| Msa0374750 | AT3G01990.6 | 51.358 | 405 | 178 | 8 | 10 | 409 | 17 | 407 | 9.17e-135 | 395 |
| Msa0374750 | AT3G01990.10 | 51.358 | 405 | 178 | 8 | 10 | 409 | 3 | 393 | 9.85e-135 | 395 |
| Msa0374750 | AT3G01990.1 | 51.358 | 405 | 178 | 8 | 10 | 409 | 3 | 393 | 9.85e-135 | 395 |
| Msa0374750 | AT3G01990.11 | 51.358 | 405 | 178 | 8 | 10 | 409 | 3 | 393 | 1.32e-134 | 394 |
| Msa0374750 | AT5G25320.3 | 47.343 | 414 | 187 | 7 | 38 | 421 | 1 | 413 | 3.12e-126 | 374 |
| Msa0374750 | AT1G12420.1 | 47.711 | 415 | 198 | 7 | 8 | 421 | 6 | 402 | 6.81e-122 | 362 |
| Msa0374750 | AT4G22780.1 | 48.379 | 401 | 184 | 7 | 12 | 409 | 9 | 389 | 5.66e-120 | 358 |
| Msa0374750 | AT4G22780.2 | 48.379 | 401 | 184 | 7 | 12 | 409 | 9 | 389 | 5.66e-120 | 358 |
| Msa0374750 | AT5G65890.1 | 40.860 | 465 | 247 | 8 | 7 | 445 | 8 | 470 | 1.23e-110 | 335 |
| Msa0374750 | AT5G65890.3 | 40.860 | 465 | 247 | 8 | 7 | 445 | 8 | 470 | 1.23e-110 | 335 |
| Msa0374750 | AT5G25320.2 | 45.845 | 373 | 170 | 8 | 1 | 341 | 1 | 373 | 5.00e-108 | 325 |
| Msa0374750 | AT3G01990.9 | 50.292 | 342 | 151 | 8 | 10 | 346 | 3 | 330 | 1.69e-106 | 319 |
| Msa0374750 | AT3G01990.4 | 50.292 | 342 | 151 | 8 | 10 | 346 | 17 | 344 | 1.81e-106 | 320 |
| Msa0374750 | AT3G01990.2 | 50.742 | 337 | 147 | 8 | 10 | 341 | 17 | 339 | 2.48e-106 | 319 |
| Msa0374750 | AT1G12420.2 | 46.110 | 347 | 169 | 6 | 76 | 421 | 1 | 330 | 7.24e-94 | 288 |
| Msa0374750 | AT5G65890.4 | 38.810 | 420 | 229 | 8 | 52 | 445 | 1 | 418 | 5.08e-91 | 283 |
| Msa0374750 | AT5G65890.2 | 38.810 | 420 | 229 | 8 | 52 | 445 | 1 | 418 | 5.08e-91 | 283 |
| Msa0374750 | AT3G01990.3 | 48.734 | 316 | 143 | 8 | 10 | 320 | 17 | 318 | 2.01e-87 | 270 |
| Msa0374750 | AT3G01990.8 | 48.734 | 316 | 143 | 8 | 10 | 320 | 3 | 304 | 2.09e-87 | 269 |
| Msa0374750 | AT5G65890.5 | 36.994 | 346 | 194 | 6 | 122 | 445 | 13 | 356 | 2.80e-69 | 224 |
Find 138 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGTGGGCGTGGGGTTAA+TGG | 0.246618 | 3_1:+74281837 | None:intergenic |
| CCAAATGTTGTTTGCTGATC+GGG | 0.257041 | 3_1:-74278421 | Msa0374750:CDS |
| TCCCAATCTATTTGTGTCTT+AGG | 0.282782 | 3_1:-74277004 | Msa0374750:three_prime_UTR |
| TAACTTGTTGGAAAGGTTCT+TGG | 0.291999 | 3_1:-74277246 | Msa0374750:CDS |
| ACCTTTAGGAATACTTTATT+CGG | 0.293495 | 3_1:-74277784 | Msa0374750:intron |
| AACAATCATGCATCTTAGTT+TGG | 0.296195 | 3_1:-74277220 | Msa0374750:three_prime_UTR |
| GGTGGAGCCGCCTATCAATA+TGG | 0.298908 | 3_1:+74278442 | None:intergenic |
| CCTTGATTAGTGTACAATTA+TGG | 0.300769 | 3_1:+74280048 | None:intergenic |
| GGGAATGTCCTCCCTCTTTC+CGG | 0.308334 | 3_1:-74278365 | Msa0374750:CDS |
| ATTGGTCAGGCAAACGGGTT+GGG | 0.317772 | 3_1:-74278758 | Msa0374750:CDS |
| GCTAAAACTAGCTTCTTCTT+TGG | 0.325528 | 3_1:-74277269 | Msa0374750:CDS |
| AATTCTTCACTTCTTTGTTC+TGG | 0.329807 | 3_1:+74278778 | None:intergenic |
| CAGCTACAACCACGTTAAAA+TGG | 0.336988 | 3_1:+74278643 | None:intergenic |
| TCATACTCAGGATCAAAATA+TGG | 0.343119 | 3_1:+74280829 | None:intergenic |
| CTTCTTCTTTGGTAACTTGT+TGG | 0.350472 | 3_1:-74277258 | Msa0374750:CDS |
| ATAGAATGTTGTGAGGAAAA+AGG | 0.357579 | 3_1:-74278330 | Msa0374750:CDS |
| ACCACTTCCAGTAGAATTCC+AGG | 0.366064 | 3_1:+74279673 | None:intergenic |
| CCCGATCAGCAAACAACATT+TGG | 0.373612 | 3_1:+74278421 | None:intergenic |
| ACATTATTCTGATATGAAAA+TGG | 0.374530 | 3_1:+74276964 | None:intergenic |
| CATATAGCGATTGAGCTAAT+CGG | 0.383863 | 3_1:-74278717 | Msa0374750:CDS |
| TTCCTAAGACACAAATAGAT+TGG | 0.398770 | 3_1:+74277002 | None:intergenic |
| CTTGCAAAGTGGTGTGGGCG+TGG | 0.401349 | 3_1:+74281828 | None:intergenic |
| AGAACAAAGAAGTGAAGAAT+TGG | 0.407236 | 3_1:-74278776 | Msa0374750:CDS |
| TTGCAAAGTGGTGTGGGCGT+GGG | 0.407315 | 3_1:+74281829 | None:intergenic |
| TTAGCCCATCCTCGTGTCTC+TGG | 0.409686 | 3_1:+74277287 | None:intergenic |
| CTGAAGTGTGGACTCATAAC+AGG | 0.416112 | 3_1:-74278623 | Msa0374750:CDS |
| ATCAGAAGATATGTAAGCTT+TGG | 0.416198 | 3_1:+74279618 | None:intergenic |
| TGAGTTTCACCCATATTGAT+AGG | 0.418165 | 3_1:-74278452 | Msa0374750:CDS |
| TCTGGTTCTTTGTCATATGT+TGG | 0.422147 | 3_1:+74277305 | None:intergenic |
| TCGTACCATCATTGACATAA+AGG | 0.431202 | 3_1:+74278586 | None:intergenic |
| TTCTGATGGAGGATGGTTCA+TGG | 0.433562 | 3_1:-74279602 | Msa0374750:CDS |
| TTCTATGTGAGGGATGCATC+AGG | 0.435247 | 3_1:-74277407 | Msa0374750:CDS |
| TTGCTGAAATTCTCATACTC+AGG | 0.439597 | 3_1:+74280817 | None:intergenic |
| GAAGCACTTCGTAAAGAAAT+CGG | 0.445977 | 3_1:-74277359 | Msa0374750:CDS |
| GCCATTCTAAACAGCTTCTC+TGG | 0.446469 | 3_1:+74280865 | None:intergenic |
| AACCATTGATCTCATTGAAA+AGG | 0.449039 | 3_1:-74279008 | Msa0374750:intron |
| TTAGAATGGCTGCAGTTTGT+TGG | 0.449593 | 3_1:-74280852 | Msa0374750:exon |
| GGTGAAACTCATGGACAAAC+TGG | 0.453115 | 3_1:+74278464 | None:intergenic |
| GATCGGGATTATGAAAGTTA+TGG | 0.463149 | 3_1:-74278405 | Msa0374750:CDS |
| ATTAAGAGCTTGTTCCCCTC+TGG | 0.467903 | 3_1:+74277433 | None:intergenic |
| AGAATGGCCTAACAGTTTGT+AGG | 0.468609 | 3_1:-74277469 | Msa0374750:CDS |
| ATACAGAAGGGGAGAAAGAA+AGG | 0.470876 | 3_1:-74277739 | Msa0374750:CDS |
| GGCCTAACAGTTTGTAGGGC+AGG | 0.474532 | 3_1:-74277464 | Msa0374750:CDS |
| TCTTTGGTAACTTGTTGGAA+AGG | 0.475792 | 3_1:-74277253 | Msa0374750:CDS |
| ACCAAATGTTGTTTGCTGAT+CGG | 0.476294 | 3_1:-74278422 | Msa0374750:CDS |
| AGAGAGTTTGTTAAATTGAG+TGG | 0.479810 | 3_1:-74281749 | Msa0374750:five_prime_UTR |
| TAACAAACCTGGAATTCTAC+TGG | 0.480298 | 3_1:-74279680 | Msa0374750:CDS |
| ATCAATATGGGTGAAACTCA+TGG | 0.480529 | 3_1:+74278455 | None:intergenic |
| GTTTCTCTTGCAAAGTGGTG+TGG | 0.483534 | 3_1:+74281822 | None:intergenic |
| TGAAGAATTGGTCAGGCAAA+CGG | 0.483759 | 3_1:-74278764 | Msa0374750:CDS |
| TTTCTCTTGCAAAGTGGTGT+GGG | 0.484468 | 3_1:+74281823 | None:intergenic |
| TCCTAAGACACAAATAGATT+GGG | 0.484665 | 3_1:+74277003 | None:intergenic |
| ATAGAAGAATAAATCTGCTT+GGG | 0.484707 | 3_1:-74277162 | Msa0374750:three_prime_UTR |
| ACCAGAGAAGCTGTTTAGAA+TGG | 0.486693 | 3_1:-74280866 | Msa0374750:exon |
| ATATAGCGATTGAGCTAATC+GGG | 0.490571 | 3_1:-74278716 | Msa0374750:CDS |
| AAAGAAGTGAAGAATTGGTC+AGG | 0.491176 | 3_1:-74278771 | Msa0374750:CDS |
| TATAGAAGAATAAATCTGCT+TGG | 0.491273 | 3_1:-74277163 | Msa0374750:three_prime_UTR |
| GAAGAATTGGTCAGGCAAAC+GGG | 0.495922 | 3_1:-74278763 | Msa0374750:CDS |
| ACAAGAATTCTGAGAGAGAA+TGG | 0.499775 | 3_1:-74277485 | Msa0374750:CDS |
| CCATAATTGTACACTAATCA+AGG | 0.501408 | 3_1:-74280048 | Msa0374750:intron |
| TACTTTATTCGGCACATGGA+CGG | 0.504584 | 3_1:-74277773 | Msa0374750:CDS |
| TTCGGAAGTGTACCTTTGGA+TGG | 0.507342 | 3_1:-74277094 | Msa0374750:three_prime_UTR |
| TTGGTCAGGCAAACGGGTTG+GGG | 0.507896 | 3_1:-74278757 | Msa0374750:CDS |
| ATGGAGAGAAAGTTGCTAGT+AGG | 0.510505 | 3_1:-74278488 | Msa0374750:CDS |
| TGATGTACCTGCGATGCATA+AGG | 0.510772 | 3_1:+74278192 | None:intergenic |
| TGCAAAGTGGTGTGGGCGTG+GGG | 0.511852 | 3_1:+74281830 | None:intergenic |
| AATTGGTCAGGCAAACGGGT+TGG | 0.513086 | 3_1:-74278759 | Msa0374750:CDS |
| ATCCGATGAGATTGTGGCAT+GGG | 0.515862 | 3_1:+74278218 | None:intergenic |
| TGTGGGCGTGGGGTTAATGG+TGG | 0.517592 | 3_1:+74281840 | None:intergenic |
| ACCTGGAATTCTACTGGAAG+TGG | 0.521746 | 3_1:-74279674 | Msa0374750:CDS |
| CGTTAAAATGGAGGCTGGCA+AGG | 0.523869 | 3_1:+74278655 | None:intergenic |
| TGTGTCCTTTATGTCAATGA+TGG | 0.524064 | 3_1:-74278591 | Msa0374750:CDS |
| GTGGAGCCGCCTATCAATAT+GGG | 0.526124 | 3_1:+74278443 | None:intergenic |
| CGGGTTGGGGTGCATTCTGT+TGG | 0.527023 | 3_1:-74278744 | Msa0374750:CDS |
| TATCCTTTGCACACAACTCT+AGG | 0.530398 | 3_1:+74277531 | None:intergenic |
| TTTGATAGTGTTAACAAACC+TGG | 0.530560 | 3_1:-74279691 | Msa0374750:CDS |
| AAGATTAAGGTAAACCTTGG+AGG | 0.533637 | 3_1:+74280784 | None:intergenic |
| GATCAGCAAACAACATTTGG+TGG | 0.537075 | 3_1:+74278424 | None:intergenic |
| ATGGAGTAACGACAACAGAC+AGG | 0.537588 | 3_1:-74278386 | Msa0374750:CDS |
| AAAGCTTACATATCTTCTGA+TGG | 0.539350 | 3_1:-74279616 | Msa0374750:CDS |
| GTTGTGTGCAAAGGATAGAG+TGG | 0.544908 | 3_1:-74277525 | Msa0374750:CDS |
| ACATATCTTCTGATGGAGGA+TGG | 0.557362 | 3_1:-74279609 | Msa0374750:CDS |
| GAATGGCCTAACAGTTTGTA+GGG | 0.559276 | 3_1:-74277468 | Msa0374750:CDS |
| TTGTGTGCAAAGGATAGAGT+GGG | 0.560363 | 3_1:-74277524 | Msa0374750:CDS |
| CAATGATGGACATGGAAGCT+TGG | 0.560378 | 3_1:+74281578 | None:intergenic |
| GATATCTCAGACAAGAGACC+AGG | 0.560821 | 3_1:+74278684 | None:intergenic |
| TGCGTACTTGTTAGAGTGTG+TGG | 0.567066 | 3_1:-74277035 | Msa0374750:three_prime_UTR |
| CTCTTAATGTCTTCTATGTG+AGG | 0.569159 | 3_1:-74277418 | Msa0374750:CDS |
| AAGAACCAGAGACACGAGGA+TGG | 0.572425 | 3_1:-74277292 | Msa0374750:CDS |
| AGAAATCGGTAAGACAATGA+TGG | 0.575183 | 3_1:-74277345 | Msa0374750:CDS |
| GCAACAAAATCAACCCTCCA+AGG | 0.576070 | 3_1:-74280798 | Msa0374750:intron |
| GGAATACTTTATTCGGCACA+TGG | 0.576960 | 3_1:-74277777 | Msa0374750:CDS |
| GGATGCACACTTGATACAGA+AGG | 0.577234 | 3_1:-74277752 | Msa0374750:CDS |
| AATGATGGTAGATGTGAAGA+AGG | 0.579827 | 3_1:-74277330 | Msa0374750:CDS |
| AACCACGTTAAAATGGAGGC+TGG | 0.580495 | 3_1:+74278650 | None:intergenic |
| CTTTGGTGATTATGAAGTCA+AGG | 0.580969 | 3_1:+74279635 | None:intergenic |
| AGATTAAGGTAAACCTTGGA+GGG | 0.581667 | 3_1:+74280785 | None:intergenic |
| TTCCCATGCCACAATCTCAT+CGG | 0.582164 | 3_1:-74278220 | Msa0374750:CDS |
| AGGGCGATCCGATGAGATTG+TGG | 0.584876 | 3_1:+74278212 | None:intergenic |
| AACATCGTATCTACAAACAT+TGG | 0.588230 | 3_1:-74281908 | None:intergenic |
| GGATCGCCCTTATGCATCGC+AGG | 0.593884 | 3_1:-74278199 | Msa0374750:intron |
| ATCTTGTTTCTCTTGCAAAG+TGG | 0.600008 | 3_1:+74281817 | None:intergenic |
| TGCACTTTGCAGGGTCTCCG+TGG | 0.603347 | 3_1:-74280084 | Msa0374750:intron |
| TACCTGCCCTACAAACTGTT+AGG | 0.606101 | 3_1:+74277462 | None:intergenic |
| CTGTCTCGACGTCCATCCAA+AGG | 0.608139 | 3_1:+74277082 | None:intergenic |
| TAAGACACAAATAGATTGGG+AGG | 0.610643 | 3_1:+74277006 | None:intergenic |
| ATATACAGTATTTCATGTCA+CGG | 0.612062 | 3_1:-74279062 | Msa0374750:intron |
| TCTTAATGTCTTCTATGTGA+GGG | 0.617321 | 3_1:-74277417 | Msa0374750:CDS |
| GGGCAGGTATATCAACCAGA+GGG | 0.617488 | 3_1:-74277448 | Msa0374750:CDS |
| GATGTACCTGCGATGCATAA+GGG | 0.618291 | 3_1:+74278193 | None:intergenic |
| GCTTACATATCTTCTGATGG+AGG | 0.624587 | 3_1:-74279613 | Msa0374750:CDS |
| TACAGAAGGGGAGAAAGAAA+GGG | 0.629110 | 3_1:-74277738 | Msa0374750:CDS |
| AGATTCTCTACTTTCGACGT+TGG | 0.629510 | 3_1:+74281722 | None:intergenic |
| CTAATCGGGAGAGACCGCCC+TGG | 0.632484 | 3_1:-74278702 | Msa0374750:CDS |
| GATGCACACTTGATACAGAA+GGG | 0.635196 | 3_1:-74277751 | Msa0374750:CDS |
| AGAACCAGAGACACGAGGAT+GGG | 0.635874 | 3_1:-74277291 | Msa0374750:CDS |
| TCTATGTGAGGGATGCATCA+GGG | 0.636872 | 3_1:-74277406 | Msa0374750:CDS |
| TGATGGTACGAGACAAGCCG+TGG | 0.642205 | 3_1:-74278574 | Msa0374750:CDS |
| ACGTGGTTGTAGCTGAAGTG+TGG | 0.647683 | 3_1:-74278635 | Msa0374750:CDS |
| GATCCGATGAGATTGTGGCA+TGG | 0.649683 | 3_1:+74278217 | None:intergenic |
| GTAAGTTGCAGAAATAAACA+AGG | 0.653405 | 3_1:-74280906 | Msa0374750:intron |
| GATGGAGGATGGTTCATGGA+TGG | 0.659799 | 3_1:-74279598 | Msa0374750:intron |
| CTACAACCACGTTAAAATGG+AGG | 0.661407 | 3_1:+74278646 | None:intergenic |
| TTTCATGTCACGGATCAACA+AGG | 0.661900 | 3_1:-74279052 | Msa0374750:CDS |
| AATTACCATAGAATGTTGTG+AGG | 0.670161 | 3_1:-74278337 | Msa0374750:CDS |
| ATGCACACTTGATACAGAAG+GGG | 0.670406 | 3_1:-74277750 | Msa0374750:CDS |
| ATGGCAACTAGCATTGTCCA+CGG | 0.673612 | 3_1:+74280067 | None:intergenic |
| TATTCAAAGAAGAGTAAGCG+AGG | 0.682011 | 3_1:-74277693 | Msa0374750:intron |
| GTTTCACCCATATTGATAGG+CGG | 0.683397 | 3_1:-74278449 | Msa0374750:CDS |
| TGGAGTAACGACAACAGACA+GGG | 0.688299 | 3_1:-74278385 | Msa0374750:CDS |
| AATCTGCATCTGAGACACAC+AGG | 0.689398 | 3_1:-74281704 | Msa0374750:intron |
| ATATCTCAGACAAGAGACCA+GGG | 0.700312 | 3_1:+74278685 | None:intergenic |
| GAGCCTAGAGTTGTGTGCAA+AGG | 0.708129 | 3_1:-74277534 | Msa0374750:CDS |
| AGGGCAGGTATATCAACCAG+AGG | 0.716826 | 3_1:-74277449 | Msa0374750:CDS |
| GACAAAGAACCAGAGACACG+AGG | 0.718132 | 3_1:-74277296 | Msa0374750:CDS |
| GGATGCATCAGGGAACTCAG+CGG | 0.742493 | 3_1:-74277396 | Msa0374750:CDS |
| GGCAGGTATATCAACCAGAG+GGG | 0.745288 | 3_1:-74277447 | Msa0374750:CDS |
| TCTCAGACAAGAGACCAGGG+CGG | 0.828951 | 3_1:+74278688 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTAATTTTTTACTTAATAA+TGG | - | chr3_1:74276975-74276994 | Msa0374750:three_prime_UTR | 10.0% |
| !!! | GTAATTTTTTACTTAATAAT+GGG | - | chr3_1:74276976-74276995 | Msa0374750:three_prime_UTR | 10.0% |
| !!! | TATATTTTACTCTATAATAT+GGG | + | chr3_1:74277664-74277683 | None:intergenic | 10.0% |
| !!! | TATATTTGAAATCTATAATA+CGG | + | chr3_1:74278190-74278209 | None:intergenic | 10.0% |
| !!! | AAATATAAAATACTTTTGTA+AGG | - | chr3_1:74278203-74278222 | Msa0374750:CDS | 10.0% |
| !!! | TTTTTGTATCTTTAATTTTT+TGG | - | chr3_1:74279415-74279434 | Msa0374750:intron | 10.0% |
| !!! | ATGTATAAATAAAATTTTCA+AGG | - | chr3_1:74279986-74280005 | Msa0374750:intron | 10.0% |
| !!! | TGTATAAATAAAATTTTCAA+GGG | - | chr3_1:74279987-74280006 | Msa0374750:intron | 10.0% |
| !!! | CAATTTCTTTTAAATAATCA+AGG | - | chr3_1:74277337-74277356 | Msa0374750:CDS | 15.0% |
| !!! | AAAGTAAAATGGTTTTAATT+GGG | + | chr3_1:74277473-74277492 | None:intergenic | 15.0% |
| !!! | TAAAGTAAAATGGTTTTAAT+TGG | + | chr3_1:74277474-74277493 | None:intergenic | 15.0% |
| !! | CTTGTAAAAATAAAGTAAAA+TGG | + | chr3_1:74277484-74277503 | None:intergenic | 15.0% |
| !!! | GTATATTTTACTCTATAATA+TGG | + | chr3_1:74277665-74277684 | None:intergenic | 15.0% |
| !! | AATTAAAATGTTATATCACT+TGG | - | chr3_1:74277914-74277933 | Msa0374750:intron | 15.0% |
| !!! | CTTTAAAATTTAACCAAATA+TGG | - | chr3_1:74278098-74278117 | Msa0374750:intron | 15.0% |
| !! | AAATAACAATTTCTCATAAA+TGG | + | chr3_1:74278288-74278307 | None:intergenic | 15.0% |
| !! | TAAAAAATAGAAAAACTCTA+GGG | + | chr3_1:74278941-74278960 | None:intergenic | 15.0% |
| !! | TTCATAAAGAATCATTTATT+TGG | - | chr3_1:74279070-74279089 | Msa0374750:intron | 15.0% |
| !! | TATATTCTTTGATTAAGATA+TGG | - | chr3_1:74279892-74279911 | Msa0374750:intron | 15.0% |
| !!! | AATTTATTCTTGTAACATTT+TGG | + | chr3_1:74280967-74280986 | None:intergenic | 15.0% |
| !! | TCATTTATTAAAGAAAGACA+TGG | + | chr3_1:74277763-74277782 | None:intergenic | 20.0% |
| !!! | TATATACTTACCTTTTTTTG+AGG | - | chr3_1:74277788-74277807 | Msa0374750:intron | 20.0% |
| !! | AAAAGGAATATTACCATATT+TGG | + | chr3_1:74278114-74278133 | None:intergenic | 20.0% |
| !!! | TTACATATGACTTTTTTCTA+TGG | - | chr3_1:74278840-74278859 | Msa0374750:intron | 20.0% |
| !! | AAAAAATAGAAAAACTCTAG+GGG | + | chr3_1:74278940-74278959 | None:intergenic | 20.0% |
| !! | GTAAAAAATAGAAAAACTCT+AGG | + | chr3_1:74278942-74278961 | None:intergenic | 20.0% |
| !!! | ATTCAATTTTCAAACTTAAC+AGG | - | chr3_1:74278969-74278988 | Msa0374750:intron | 20.0% |
| !! | GATTCTTTATGAAACAATAA+AGG | + | chr3_1:74279063-74279082 | None:intergenic | 20.0% |
| !! | GAAATACTGTATATATCAAT+CGG | + | chr3_1:74279774-74279793 | None:intergenic | 20.0% |
| !!! | TTAACAGTTTTTCATACAAT+AGG | - | chr3_1:74280025-74280044 | Msa0374750:intron | 20.0% |
| !! | TCAAAAAAGAATATCTCTTA+TGG | - | chr3_1:74280295-74280314 | Msa0374750:intron | 20.0% |
| !!! | TTCCTACTAATTTTGTTTAT+TGG | - | chr3_1:74280904-74280923 | Msa0374750:intron | 20.0% |
| !!! | AATAATTTTCAGACAAACAA+GGG | + | chr3_1:74280931-74280950 | None:intergenic | 20.0% |
| !!! | AAATAATTTTCAGACAAACA+AGG | + | chr3_1:74280932-74280951 | None:intergenic | 20.0% |
| !! | AGTCTTAGTATTAAATTCTA+CGG | - | chr3_1:74281267-74281286 | Msa0374750:intron | 20.0% |
| !! | ACATTATTCTGATATGAAAA+TGG | + | chr3_1:74281881-74281900 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCTCAAAAGAGAG+AGG | - | chr3_1:74277048-74277067 | Msa0374750:three_prime_UTR | 25.0% |
| !!! | TTTTTTTCTCAAAAGAGAGA+GGG | - | chr3_1:74277049-74277068 | Msa0374750:three_prime_UTR | 25.0% |
| ! | AAGATATTTCTTTCATTGGT+AGG | + | chr3_1:74277542-74277561 | None:intergenic | 25.0% |
| ! | AGTGAAGATATTTCTTTCAT+TGG | + | chr3_1:74277546-74277565 | None:intergenic | 25.0% |
| ! | TAGAGTAAAATATACCAAAG+TGG | - | chr3_1:74277670-74277689 | Msa0374750:intron | 25.0% |
| ! | ATTAAAGAAAGACATGGTAT+TGG | + | chr3_1:74277757-74277776 | None:intergenic | 25.0% |
| ! | AATATACTTGCCTCAAAAAA+AGG | + | chr3_1:74277801-74277820 | None:intergenic | 25.0% |
| ! | GTACAGAAAAAAATAGAGTT+TGG | + | chr3_1:74277828-74277847 | None:intergenic | 25.0% |
| ! | GAGAAATCAAGATAAGATTA+AGG | + | chr3_1:74278074-74278093 | None:intergenic | 25.0% |
| ! | TATGATCAGATTGTGTTAAA+AGG | + | chr3_1:74278550-74278569 | None:intergenic | 25.0% |
| ! | TTTAACACAATCTGATCATA+AGG | - | chr3_1:74278550-74278569 | Msa0374750:CDS | 25.0% |
| !! | CACTTTGTGTAGTAATATTT+TGG | + | chr3_1:74278612-74278631 | None:intergenic | 25.0% |
| ! | CAAAATATTACTACACAAAG+TGG | - | chr3_1:74278610-74278629 | Msa0374750:CDS | 25.0% |
| ! | GTACAATAAAAATGCATTAG+TGG | + | chr3_1:74279116-74279135 | None:intergenic | 25.0% |
| !!! | GTATCTTTAATTTTTTGGAC+CGG | - | chr3_1:74279420-74279439 | Msa0374750:intron | 25.0% |
| !!! | TATCTTTAATTTTTTGGACC+GGG | - | chr3_1:74279421-74279440 | Msa0374750:intron | 25.0% |
| ! | GCCTATCATAAAAATGAAAA+TGG | - | chr3_1:74279496-74279515 | Msa0374750:intron | 25.0% |
| !!! | GCCATTTTCATTTTTATGAT+AGG | + | chr3_1:74279500-74279519 | None:intergenic | 25.0% |
| ! | AATACCACACTCTTTATTAT+TGG | - | chr3_1:74279549-74279568 | Msa0374750:intron | 25.0% |
| ! | ATACCACACTCTTTATTATT+GGG | - | chr3_1:74279550-74279569 | Msa0374750:intron | 25.0% |
| !! | TACTCAATGTAAAAGTATGT+TGG | - | chr3_1:74279613-74279632 | Msa0374750:CDS | 25.0% |
| ! | ATATACAGTATTTCATGTCA+CGG | - | chr3_1:74279780-74279799 | Msa0374750:intron | 25.0% |
| ! | TTGTATGAAAAACTGTTAAC+AGG | + | chr3_1:74280024-74280043 | None:intergenic | 25.0% |
| !!! | TATTCTTTTTTGATCATCCA+CGG | + | chr3_1:74280288-74280307 | None:intergenic | 25.0% |
| ! | AAAAAGAATATCTCTTATGG+AGG | - | chr3_1:74280298-74280317 | Msa0374750:intron | 25.0% |
| !! | CAACATTCTATGGTAATTTT+CGG | + | chr3_1:74280503-74280522 | None:intergenic | 25.0% |
| !! | ATTTGTCTGATTTCTAAAGA+AGG | - | chr3_1:74280755-74280774 | Msa0374750:intron | 25.0% |
| !!! | CATTATTCTGTTTCTATGTA+AGG | + | chr3_1:74280826-74280845 | None:intergenic | 25.0% |
| ! | GTCCAATAAACAAAATTAGT+AGG | + | chr3_1:74280909-74280928 | None:intergenic | 25.0% |
| ! | TACAAGAATAAATTCTCACT+TGG | - | chr3_1:74280973-74280992 | Msa0374750:intron | 25.0% |
| ! | ATTCTCACTTGGATTAATTT+AGG | - | chr3_1:74280984-74281003 | Msa0374750:intron | 25.0% |
| ! | ATTAGAAATATGAAGACTTG+AGG | - | chr3_1:74281009-74281028 | Msa0374750:intron | 25.0% |
| !! | ACCTTTAGGAATACTTTATT+CGG | - | chr3_1:74281058-74281077 | Msa0374750:intron | 25.0% |
| ! | TATAGAAGAATAAATCTGCT+TGG | - | chr3_1:74281679-74281698 | Msa0374750:intron | 25.0% |
| ! | ATAGAAGAATAAATCTGCTT+GGG | - | chr3_1:74281680-74281699 | Msa0374750:intron | 25.0% |
| !! | ATAAAAACTACGCATGTTTT+CGG | - | chr3_1:74281730-74281749 | Msa0374750:five_prime_UTR | 25.0% |
| !! | AGAGAGTTTGTTAAATTGAG+TGG | - | chr3_1:74277093-74277112 | Msa0374750:three_prime_UTR | 30.0% |
| !!! | AATTTTGTCAATGATGGACA+TGG | + | chr3_1:74277275-74277294 | None:intergenic | 30.0% |
| ! | GCTGTAAATTTTGTCAATGA+TGG | + | chr3_1:74277281-74277300 | None:intergenic | 30.0% |
| AAATATACCAAAGTGGATAC+AGG | - | chr3_1:74277677-74277696 | Msa0374750:intron | 30.0% | |
| GTAAGTTGCAGAAATAAACA+AGG | - | chr3_1:74277936-74277955 | Msa0374750:intron | 30.0% | |
| TCATACTCAGGATCAAAATA+TGG | + | chr3_1:74278016-74278035 | None:intergenic | 30.0% | |
| GATAAGATTAAGGTAAACCT+TGG | + | chr3_1:74278064-74278083 | None:intergenic | 30.0% | |
| !!! | ATTTGATGGTTTTAGGCAAA+AGG | + | chr3_1:74278131-74278150 | None:intergenic | 30.0% |
| CATAAAACGTGTGAATTTGA+TGG | + | chr3_1:74278145-74278164 | None:intergenic | 30.0% | |
| AGCTCTGTTAAAAAAAGAGA+AGG | + | chr3_1:74278341-74278360 | None:intergenic | 30.0% | |
| ! | CAAACTCATCTTAGTTCTTT+CGG | - | chr3_1:74278398-74278417 | Msa0374750:CDS | 30.0% |
| ! | ATTGGTTTCAGCTAAGATTA+AGG | + | chr3_1:74278506-74278525 | None:intergenic | 30.0% |
| AGATTGTGTTAAAAGGAGAT+CGG | + | chr3_1:74278543-74278562 | None:intergenic | 30.0% | |
| !!! | TAATATTTTGGCTCTGTACA+AGG | + | chr3_1:74278600-74278619 | None:intergenic | 30.0% |
| TTAGAAACTGAAGCTGAATA+AGG | + | chr3_1:74278690-74278709 | None:intergenic | 30.0% | |
| ATTCAGCTTCAGTTTCTAAT+AGG | - | chr3_1:74278691-74278710 | Msa0374750:CDS | 30.0% | |
| AATGAAGTTTACCATCAAAG+AGG | + | chr3_1:74278738-74278757 | None:intergenic | 30.0% | |
| CCTTGATTAGTGTACAATTA+TGG | + | chr3_1:74278797-74278816 | None:intergenic | 30.0% | |
| CCATAATTGTACACTAATCA+AGG | - | chr3_1:74278794-74278813 | Msa0374750:CDS | 30.0% | |
| CAAACTACAACTCAAATTAG+AGG | + | chr3_1:74278866-74278885 | None:intergenic | 30.0% | |
| !! | CTCTAATTTGAGTTGTAGTT+TGG | - | chr3_1:74278864-74278883 | Msa0374750:intron | 30.0% |
| !! | TTTGATAGTGTTAACAAACC+TGG | - | chr3_1:74279151-74279170 | Msa0374750:intron | 30.0% |
| ATCAGAAGATATGTAAGCTT+TGG | + | chr3_1:74279227-74279246 | None:intergenic | 30.0% | |
| AAAGCTTACATATCTTCTGA+TGG | - | chr3_1:74279226-74279245 | Msa0374750:intron | 30.0% | |
| ! | TCTTTGTAGCTAATGCATTT+TGG | + | chr3_1:74279298-74279317 | None:intergenic | 30.0% |
| ! | CTATGTTTGGTAACAAAGTT+CGG | + | chr3_1:74279377-74279396 | None:intergenic | 30.0% |
| ACACAGATATTCACTATGTT+TGG | + | chr3_1:74279390-74279409 | None:intergenic | 30.0% | |
| AAAAGTAAAAACAACAGTCC+CGG | + | chr3_1:74279442-74279461 | None:intergenic | 30.0% | |
| CACACAATCACATACATTTA+TGG | - | chr3_1:74279690-74279709 | Msa0374750:CDS | 30.0% | |
| TTAAATACCTGTATCAGGTA+CGG | + | chr3_1:74279735-74279754 | None:intergenic | 30.0% | |
| AACCATTGATCTCATTGAAA+AGG | - | chr3_1:74279834-74279853 | Msa0374750:intron | 30.0% | |
| ! | TTTTTCATACAATAGGCTCT+AGG | - | chr3_1:74280032-74280051 | Msa0374750:intron | 30.0% |
| AATTCTTCACTTCTTTGTTC+TGG | + | chr3_1:74280067-74280086 | None:intergenic | 30.0% | |
| AGAACAAAGAAGTGAAGAAT+TGG | - | chr3_1:74280066-74280085 | Msa0374750:CDS | 30.0% | |
| AATTACCATAGAATGTTGTG+AGG | - | chr3_1:74280505-74280524 | Msa0374750:intron | 30.0% | |
| ! | TTTTTCCTCACAACATTCTA+TGG | + | chr3_1:74280513-74280532 | None:intergenic | 30.0% |
| ATAGAATGTTGTGAGGAAAA+AGG | - | chr3_1:74280512-74280531 | Msa0374750:intron | 30.0% | |
| TTAAATGGTTCAAATGTCGA+GGG | - | chr3_1:74280720-74280739 | Msa0374750:intron | 30.0% | |
| ! | GAAGGTTTTCTATAAGATAG+AGG | - | chr3_1:74280773-74280792 | Msa0374750:intron | 30.0% |
| TATAAGATAGAGGTCATGAA+AGG | - | chr3_1:74280783-74280802 | Msa0374750:intron | 30.0% | |
| ! | AGATACAGCTTTTCTCAATT+TGG | - | chr3_1:74280879-74280898 | Msa0374750:five_prime_UTR | 30.0% |
| AAAAGTTCTTTCACAAATCG+TGG | + | chr3_1:74281214-74281233 | None:intergenic | 30.0% | |
| ! | GTATTAAATTCTACGGATTG+TGG | - | chr3_1:74281274-74281293 | Msa0374750:intron | 30.0% |
| TCTTAATGTCTTCTATGTGA+GGG | - | chr3_1:74281425-74281444 | Msa0374750:intron | 30.0% | |
| AACAATCATGCATCTTAGTT+TGG | - | chr3_1:74281622-74281641 | Msa0374750:intron | 30.0% | |
| ! | GTAGTTTTTATAGCATTGTG+TGG | + | chr3_1:74281721-74281740 | None:intergenic | 30.0% |
| TCCTAAGACACAAATAGATT+GGG | + | chr3_1:74281842-74281861 | None:intergenic | 30.0% | |
| TTCCTAAGACACAAATAGAT+TGG | + | chr3_1:74281843-74281862 | None:intergenic | 30.0% | |
| ! | ATCTTGTTTCTCTTGCAAAG+TGG | + | chr3_1:74277028-74277047 | None:intergenic | 35.0% |
| TTGGAGAATGATACTGATAG+AGG | + | chr3_1:74277248-74277267 | None:intergenic | 35.0% | |
| ! | TTTTGTTCCTGTATCCACTT+TGG | + | chr3_1:74277687-74277706 | None:intergenic | 35.0% |
| TTGCTGAAATTCTCATACTC+AGG | + | chr3_1:74278028-74278047 | None:intergenic | 35.0% | |
| AGATTAAGGTAAACCTTGGA+GGG | + | chr3_1:74278060-74278079 | None:intergenic | 35.0% | |
| AAGATTAAGGTAAACCTTGG+AGG | + | chr3_1:74278061-74278080 | None:intergenic | 35.0% | |
| !! | CGTGTGAATTTGATGGTTTT+AGG | + | chr3_1:74278138-74278157 | None:intergenic | 35.0% |
| !! | AAAAGAAGTGTCCTCTTTGA+TGG | - | chr3_1:74278724-74278743 | Msa0374750:CDS | 35.0% |
| AAACTTCATTTGCACTTTGC+AGG | - | chr3_1:74278748-74278767 | Msa0374750:CDS | 35.0% | |
| AACTTCATTTGCACTTTGCA+GGG | - | chr3_1:74278749-74278768 | Msa0374750:CDS | 35.0% | |
| !! | TAGACTTCTAAAGTAGCTGA+TGG | + | chr3_1:74278890-74278909 | None:intergenic | 35.0% |
| ! | ATCAGCTACTTTAGAAGTCT+AGG | - | chr3_1:74278889-74278908 | Msa0374750:intron | 35.0% |
| TAAAAAGTGGTACTCACAGA+GGG | + | chr3_1:74279014-74279033 | None:intergenic | 35.0% | |
| TTAAAAAGTGGTACTCACAG+AGG | + | chr3_1:74279015-74279034 | None:intergenic | 35.0% | |
| ACAAGTGGCTACTTAAAAAG+TGG | + | chr3_1:74279027-74279046 | None:intergenic | 35.0% | |
| TAACAAACCTGGAATTCTAC+TGG | - | chr3_1:74279162-74279181 | Msa0374750:intron | 35.0% | |
| ! | CTTTGGTGATTATGAAGTCA+AGG | + | chr3_1:74279210-74279229 | None:intergenic | 35.0% |
| TCCCATATGAAATTCGAACA+GGG | + | chr3_1:74279327-74279346 | None:intergenic | 35.0% | |
| TGTTCGAATTTCATATGGGA+CGG | - | chr3_1:74279327-74279346 | Msa0374750:intron | 35.0% | |
| !!! | GCATGAGTTTTAGACGAAAA+AGG | - | chr3_1:74279518-74279537 | Msa0374750:intron | 35.0% |
| !! | GTTTTAGACGAAAAAGGAAG+CGG | - | chr3_1:74279524-74279543 | Msa0374750:intron | 35.0% |
| TCACCCAATAATAAAGAGTG+TGG | + | chr3_1:74279556-74279575 | None:intergenic | 35.0% | |
| ! | CACCTTTTCAATGAGATCAA+TGG | + | chr3_1:74279839-74279858 | None:intergenic | 35.0% |
| !!! | ACTTCTTTGTTCTGGCTTTT+CGG | + | chr3_1:74280059-74280078 | None:intergenic | 35.0% |
| AAAGAAGTGAAGAATTGGTC+AGG | - | chr3_1:74280071-74280090 | Msa0374750:CDS | 35.0% | |
| CATATAGCGATTGAGCTAAT+CGG | - | chr3_1:74280125-74280144 | Msa0374750:intron | 35.0% | |
| ATATAGCGATTGAGCTAATC+GGG | - | chr3_1:74280126-74280145 | Msa0374750:intron | 35.0% | |
| TGTGTCCTTTATGTCAATGA+TGG | - | chr3_1:74280251-74280270 | Msa0374750:intron | 35.0% | |
| TCGTACCATCATTGACATAA+AGG | + | chr3_1:74280259-74280278 | None:intergenic | 35.0% | |
| ! | CAGCTCAATAACATTTTACG+TGG | - | chr3_1:74280323-74280342 | Msa0374750:intron | 35.0% |
| ! | TAACATTTTACGTGGATGTG+AGG | - | chr3_1:74280331-74280350 | Msa0374750:intron | 35.0% |
| ATCAATATGGGTGAAACTCA+TGG | + | chr3_1:74280390-74280409 | None:intergenic | 35.0% | |
| TGAGTTTCACCCATATTGAT+AGG | - | chr3_1:74280390-74280409 | Msa0374750:intron | 35.0% | |
| ! | ACCAAATGTTGTTTGCTGAT+CGG | - | chr3_1:74280420-74280439 | Msa0374750:intron | 35.0% |
| GATCGGGATTATGAAAGTTA+TGG | - | chr3_1:74280437-74280456 | Msa0374750:intron | 35.0% | |
| ! | ATTCTATGGTAATTTTCGGC+CGG | + | chr3_1:74280499-74280518 | None:intergenic | 35.0% |
| TTGTGAGGAAAAAGGATACT+CGG | - | chr3_1:74280520-74280539 | Msa0374750:intron | 35.0% | |
| AGTCACACATGGTACTTAAA+TGG | - | chr3_1:74280705-74280724 | Msa0374750:intron | 35.0% | |
| CTTAAATGGTTCAAATGTCG+AGG | - | chr3_1:74280719-74280738 | Msa0374750:intron | 35.0% | |
| GAAAGGCTTGTGTATTCAAA+TGG | - | chr3_1:74280800-74280819 | Msa0374750:CDS | 35.0% | |
| ATATGAAGACTTGAGGAATG+TGG | - | chr3_1:74281016-74281035 | Msa0374750:intron | 35.0% | |
| AATGTTGATCGTGTACCTTT+AGG | - | chr3_1:74281044-74281063 | Msa0374750:intron | 35.0% | |
| ! | GCCGAATAAAGTATTCCTAA+AGG | + | chr3_1:74281062-74281081 | None:intergenic | 35.0% |
| TATTCAAAGAAGAGTAAGCG+AGG | - | chr3_1:74281149-74281168 | Msa0374750:intron | 35.0% | |
| ! | ACAAGAATTCTGAGAGAGAA+TGG | - | chr3_1:74281357-74281376 | Msa0374750:intron | 35.0% |
| CTCTTAATGTCTTCTATGTG+AGG | - | chr3_1:74281424-74281443 | Msa0374750:intron | 35.0% | |
| ! | GAAGCACTTCGTAAAGAAAT+CGG | - | chr3_1:74281483-74281502 | Msa0374750:intron | 35.0% |
| AGAAATCGGTAAGACAATGA+TGG | - | chr3_1:74281497-74281516 | Msa0374750:intron | 35.0% | |
| AATGATGGTAGATGTGAAGA+AGG | - | chr3_1:74281512-74281531 | Msa0374750:five_prime_UTR | 35.0% | |
| !! | TCTGGTTCTTTGTCATATGT+TGG | + | chr3_1:74281540-74281559 | None:intergenic | 35.0% |
| ! | GCTAAAACTAGCTTCTTCTT+TGG | - | chr3_1:74281573-74281592 | Msa0374750:five_prime_UTR | 35.0% |
| ! | CTTCTTCTTTGGTAACTTGT+TGG | - | chr3_1:74281584-74281603 | Msa0374750:five_prime_UTR | 35.0% |
| !! | TCTTTGGTAACTTGTTGGAA+AGG | - | chr3_1:74281589-74281608 | Msa0374750:five_prime_UTR | 35.0% |
| !! | TAACTTGTTGGAAAGGTTCT+TGG | - | chr3_1:74281596-74281615 | Msa0374750:intron | 35.0% |
| TAAGACACAAATAGATTGGG+AGG | + | chr3_1:74281839-74281858 | None:intergenic | 35.0% | |
| TCCCAATCTATTTGTGTCTT+AGG | - | chr3_1:74281838-74281857 | Msa0374750:five_prime_UTR | 35.0% | |
| TTTCTCTTGCAAAGTGGTGT+GGG | + | chr3_1:74277022-74277041 | None:intergenic | 40.0% | |
| AGATTCTCTACTTTCGACGT+TGG | + | chr3_1:74277123-74277142 | None:intergenic | 40.0% | |
| ACCAGAGAAGCTGTTTAGAA+TGG | - | chr3_1:74277976-74277995 | Msa0374750:intron | 40.0% | |
| TTAGAATGGCTGCAGTTTGT+TGG | - | chr3_1:74277990-74278009 | Msa0374750:intron | 40.0% | |
| ! | ATACTTTTGTAAGGAGACCG+TGG | - | chr3_1:74278212-74278231 | Msa0374750:CDS | 40.0% |
| GAGTGAGACACTACATATGT+TGG | + | chr3_1:74278238-74278257 | None:intergenic | 40.0% | |
| GTTAAAAGGAGATCGGAGTT+GGG | + | chr3_1:74278536-74278555 | None:intergenic | 40.0% | |
| TGTTAAAAGGAGATCGGAGT+TGG | + | chr3_1:74278537-74278556 | None:intergenic | 40.0% | |
| GCTTACATATCTTCTGATGG+AGG | - | chr3_1:74279229-74279248 | Msa0374750:intron | 40.0% | |
| ACATATCTTCTGATGGAGGA+TGG | - | chr3_1:74279233-74279252 | Msa0374750:intron | 40.0% | |
| TGCCCTGTTCGAATTTCATA+TGG | - | chr3_1:74279322-74279341 | Msa0374750:intron | 40.0% | |
| GCCCTGTTCGAATTTCATAT+GGG | - | chr3_1:74279323-74279342 | Msa0374750:intron | 40.0% | |
| GTCCCATATGAAATTCGAAC+AGG | + | chr3_1:74279328-74279347 | None:intergenic | 40.0% | |
| CATATGGGACGGTTGTAAAA+TGG | - | chr3_1:74279338-74279357 | Msa0374750:intron | 40.0% | |
| TTGGGTGAATGAATCAGTCT+AGG | - | chr3_1:74279568-74279587 | Msa0374750:intron | 40.0% | |
| GAATATTCCGTACCTGATAC+AGG | - | chr3_1:74279725-74279744 | Msa0374750:intron | 40.0% | |
| GCAGCTTAAATACCTGTATC+AGG | + | chr3_1:74279740-74279759 | None:intergenic | 40.0% | |
| TTTCATGTCACGGATCAACA+AGG | - | chr3_1:74279790-74279809 | Msa0374750:intron | 40.0% | |
| !! | CAATGAGTTAGTCTTCCACA+TGG | + | chr3_1:74279932-74279951 | None:intergenic | 40.0% |
| TGAAGAATTGGTCAGGCAAA+CGG | - | chr3_1:74280078-74280097 | Msa0374750:intron | 40.0% | |
| ATATCTCAGACAAGAGACCA+GGG | + | chr3_1:74280160-74280179 | None:intergenic | 40.0% | |
| CTACAACCACGTTAAAATGG+AGG | + | chr3_1:74280199-74280218 | None:intergenic | 40.0% | |
| CAGCTACAACCACGTTAAAA+TGG | + | chr3_1:74280202-74280221 | None:intergenic | 40.0% | |
| ! | ATTTTACGTGGATGTGAGGA+TGG | - | chr3_1:74280335-74280354 | Msa0374750:intron | 40.0% |
| ATGGAGAGAAAGTTGCTAGT+AGG | - | chr3_1:74280354-74280373 | Msa0374750:intron | 40.0% | |
| GTTTCACCCATATTGATAGG+CGG | - | chr3_1:74280393-74280412 | Msa0374750:intron | 40.0% | |
| GATCAGCAAACAACATTTGG+TGG | + | chr3_1:74280421-74280440 | None:intergenic | 40.0% | |
| ! | CCAAATGTTGTTTGCTGATC+GGG | - | chr3_1:74280421-74280440 | Msa0374750:intron | 40.0% |
| GTGACTGATAAGTGAACATG+CGG | + | chr3_1:74280691-74280710 | None:intergenic | 40.0% | |
| GTTCACTTATCAGTCACACA+TGG | - | chr3_1:74280694-74280713 | Msa0374750:intron | 40.0% | |
| GGAATACTTTATTCGGCACA+TGG | - | chr3_1:74281065-74281084 | Msa0374750:intron | 40.0% | |
| TACTTTATTCGGCACATGGA+CGG | - | chr3_1:74281069-74281088 | Msa0374750:intron | 40.0% | |
| GATGCACACTTGATACAGAA+GGG | - | chr3_1:74281091-74281110 | Msa0374750:intron | 40.0% | |
| ATGCACACTTGATACAGAAG+GGG | - | chr3_1:74281092-74281111 | Msa0374750:intron | 40.0% | |
| ATACAGAAGGGGAGAAAGAA+AGG | - | chr3_1:74281103-74281122 | Msa0374750:intron | 40.0% | |
| TACAGAAGGGGAGAAAGAAA+GGG | - | chr3_1:74281104-74281123 | Msa0374750:intron | 40.0% | |
| TATCCTTTGCACACAACTCT+AGG | + | chr3_1:74281314-74281333 | None:intergenic | 40.0% | |
| TTGTGTGCAAAGGATAGAGT+GGG | - | chr3_1:74281318-74281337 | Msa0374750:intron | 40.0% | |
| AGAATGGCCTAACAGTTTGT+AGG | - | chr3_1:74281373-74281392 | Msa0374750:intron | 40.0% | |
| GAATGGCCTAACAGTTTGTA+GGG | - | chr3_1:74281374-74281393 | Msa0374750:intron | 40.0% | |
| !! | TGTTTTCGGAAGTGTACCTT+TGG | - | chr3_1:74281744-74281763 | Msa0374750:five_prime_UTR | 40.0% |
| GTTTCTCTTGCAAAGTGGTG+TGG | + | chr3_1:74277023-74277042 | None:intergenic | 45.0% | |
| ! | AATCTGCATCTGAGACACAC+AGG | - | chr3_1:74277138-74277157 | Msa0374750:three_prime_UTR | 45.0% |
| !! | CAATGATGGACATGGAAGCT+TGG | + | chr3_1:74277267-74277286 | None:intergenic | 45.0% |
| GCCATTCTAAACAGCTTCTC+TGG | + | chr3_1:74277980-74277999 | None:intergenic | 45.0% | |
| GCAACAAAATCAACCCTCCA+AGG | - | chr3_1:74278044-74278063 | Msa0374750:intron | 45.0% | |
| GACACTACATATGTTGGCCA+CGG | + | chr3_1:74278232-74278251 | None:intergenic | 45.0% | |
| TCGGAGTTGGGTAGGTAAAT+TGG | + | chr3_1:74278524-74278543 | None:intergenic | 45.0% | |
| ATGGCAACTAGCATTGTCCA+CGG | + | chr3_1:74278778-74278797 | None:intergenic | 45.0% | |
| GGAGCAATGTGACAAACAAG+TGG | + | chr3_1:74279042-74279061 | None:intergenic | 45.0% | |
| ACCTGGAATTCTACTGGAAG+TGG | - | chr3_1:74279168-74279187 | Msa0374750:intron | 45.0% | |
| ACCACTTCCAGTAGAATTCC+AGG | + | chr3_1:74279172-74279191 | None:intergenic | 45.0% | |
| TTCTGATGGAGGATGGTTCA+TGG | - | chr3_1:74279240-74279259 | Msa0374750:intron | 45.0% | |
| ! | TCTGTTTGAAACGAGAGAGC+AGG | + | chr3_1:74279662-74279681 | None:intergenic | 45.0% |
| GTTTCCATCTAACCACCATG+TGG | - | chr3_1:74279914-74279933 | Msa0374750:intron | 45.0% | |
| TCTTCCACATGGTGGTTAGA+TGG | + | chr3_1:74279921-74279940 | None:intergenic | 45.0% | |
| !! | TGAGTTAGTCTTCCACATGG+TGG | + | chr3_1:74279929-74279948 | None:intergenic | 45.0% |
| GAAGAATTGGTCAGGCAAAC+GGG | - | chr3_1:74280079-74280098 | Msa0374750:intron | 45.0% | |
| GATATCTCAGACAAGAGACC+AGG | + | chr3_1:74280161-74280180 | None:intergenic | 45.0% | |
| AACCACGTTAAAATGGAGGC+TGG | + | chr3_1:74280195-74280214 | None:intergenic | 45.0% | |
| CTGAAGTGTGGACTCATAAC+AGG | - | chr3_1:74280219-74280238 | Msa0374750:intron | 45.0% | |
| GGTGAAACTCATGGACAAAC+TGG | + | chr3_1:74280381-74280400 | None:intergenic | 45.0% | |
| CCCGATCAGCAAACAACATT+TGG | + | chr3_1:74280424-74280443 | None:intergenic | 45.0% | |
| ATGGAGTAACGACAACAGAC+AGG | - | chr3_1:74280456-74280475 | Msa0374750:intron | 45.0% | |
| TGGAGTAACGACAACAGACA+GGG | - | chr3_1:74280457-74280476 | Msa0374750:intron | 45.0% | |
| ! | GTAATTTTCGGCCGGAAAGA+GGG | + | chr3_1:74280491-74280510 | None:intergenic | 45.0% |
| TGAGGAAAAAGGATACTCGG+TGG | - | chr3_1:74280523-74280542 | Msa0374750:intron | 45.0% | |
| TTCCCATGCCACAATCTCAT+CGG | - | chr3_1:74280622-74280641 | Msa0374750:intron | 45.0% | |
| ATCCGATGAGATTGTGGCAT+GGG | + | chr3_1:74280627-74280646 | None:intergenic | 45.0% | |
| GATGTACCTGCGATGCATAA+GGG | + | chr3_1:74280652-74280671 | None:intergenic | 45.0% | |
| TGATGTACCTGCGATGCATA+AGG | + | chr3_1:74280653-74280672 | None:intergenic | 45.0% | |
| GGATGCACACTTGATACAGA+AGG | - | chr3_1:74281090-74281109 | Msa0374750:intron | 45.0% | |
| ! | ATTCTACGGATTGTGGACAC+AGG | - | chr3_1:74281281-74281300 | Msa0374750:intron | 45.0% |
| ! | TTCTACGGATTGTGGACACA+GGG | - | chr3_1:74281282-74281301 | Msa0374750:intron | 45.0% |
| GTTGTGTGCAAAGGATAGAG+TGG | - | chr3_1:74281317-74281336 | Msa0374750:intron | 45.0% | |
| TACCTGCCCTACAAACTGTT+AGG | + | chr3_1:74281383-74281402 | None:intergenic | 45.0% | |
| ! | ATTAAGAGCTTGTTCCCCTC+TGG | + | chr3_1:74281412-74281431 | None:intergenic | 45.0% |
| TTCTATGTGAGGGATGCATC+AGG | - | chr3_1:74281435-74281454 | Msa0374750:intron | 45.0% | |
| TCTATGTGAGGGATGCATCA+GGG | - | chr3_1:74281436-74281455 | Msa0374750:intron | 45.0% | |
| ! | TTCGGAAGTGTACCTTTGGA+TGG | - | chr3_1:74281748-74281767 | Msa0374750:five_prime_UTR | 45.0% |
| ! | TGCGTACTTGTTAGAGTGTG+TGG | - | chr3_1:74281807-74281826 | Msa0374750:five_prime_UTR | 45.0% |
| !!! | TTTATTTTATTTTTGAAATA+CGG | - | chr3_1:74278367-74278386 | Msa0374750:CDS | 5.0% |
| !! | TTAAAATTAAAATGTTTAAT+TGG | - | chr3_1:74278654-74278673 | Msa0374750:CDS | 5.0% |
| AAAGGAGATCGGAGTTGGGT+AGG | + | chr3_1:74278532-74278551 | None:intergenic | 50.0% | |
| GATGGAGGATGGTTCATGGA+TGG | - | chr3_1:74279244-74279263 | Msa0374750:intron | 50.0% | |
| AATTGGTCAGGCAAACGGGT+TGG | - | chr3_1:74280083-74280102 | Msa0374750:intron | 50.0% | |
| ! | ATTGGTCAGGCAAACGGGTT+GGG | - | chr3_1:74280084-74280103 | Msa0374750:intron | 50.0% |
| CGTTAAAATGGAGGCTGGCA+AGG | + | chr3_1:74280190-74280209 | None:intergenic | 50.0% | |
| !! | TGCCAGCCTCCATTTTAACG+TGG | - | chr3_1:74280190-74280209 | Msa0374750:intron | 50.0% |
| ACGTGGTTGTAGCTGAAGTG+TGG | - | chr3_1:74280207-74280226 | Msa0374750:intron | 50.0% | |
| GTGGAGCCGCCTATCAATAT+GGG | + | chr3_1:74280402-74280421 | None:intergenic | 50.0% | |
| ! | GGTAATTTTCGGCCGGAAAG+AGG | + | chr3_1:74280492-74280511 | None:intergenic | 50.0% |
| GATCCGATGAGATTGTGGCA+TGG | + | chr3_1:74280628-74280647 | None:intergenic | 50.0% | |
| GAGCCTAGAGTTGTGTGCAA+AGG | - | chr3_1:74281308-74281327 | Msa0374750:intron | 50.0% | |
| AGGGCAGGTATATCAACCAG+AGG | - | chr3_1:74281393-74281412 | Msa0374750:intron | 50.0% | |
| GGGCAGGTATATCAACCAGA+GGG | - | chr3_1:74281394-74281413 | Msa0374750:intron | 50.0% | |
| GGCAGGTATATCAACCAGAG+GGG | - | chr3_1:74281395-74281414 | Msa0374750:intron | 50.0% | |
| GACAAAGAACCAGAGACACG+AGG | - | chr3_1:74281546-74281565 | Msa0374750:five_prime_UTR | 50.0% | |
| AAGAACCAGAGACACGAGGA+TGG | - | chr3_1:74281550-74281569 | Msa0374750:five_prime_UTR | 50.0% | |
| AGAACCAGAGACACGAGGAT+GGG | - | chr3_1:74281551-74281570 | Msa0374750:five_prime_UTR | 50.0% | |
| TTGCAAAGTGGTGTGGGCGT+GGG | + | chr3_1:74277016-74277035 | None:intergenic | 55.0% | |
| TGGTACTCACAGAGGGCTAG+TGG | + | chr3_1:74279007-74279026 | None:intergenic | 55.0% | |
| !! | TTGGTCAGGCAAACGGGTTG+GGG | - | chr3_1:74280085-74280104 | Msa0374750:intron | 55.0% |
| TCTCAGACAAGAGACCAGGG+CGG | + | chr3_1:74280157-74280176 | None:intergenic | 55.0% | |
| TGATGGTACGAGACAAGCCG+TGG | - | chr3_1:74280268-74280287 | Msa0374750:intron | 55.0% | |
| GGTGGAGCCGCCTATCAATA+TGG | + | chr3_1:74280403-74280422 | None:intergenic | 55.0% | |
| GGGAATGTCCTCCCTCTTTC+CGG | - | chr3_1:74280477-74280496 | Msa0374750:intron | 55.0% | |
| ! | ATTTTCGGCCGGAAAGAGGG+AGG | + | chr3_1:74280488-74280507 | None:intergenic | 55.0% |
| AGGGCGATCCGATGAGATTG+TGG | + | chr3_1:74280633-74280652 | None:intergenic | 55.0% | |
| GGCCTAACAGTTTGTAGGGC+AGG | - | chr3_1:74281378-74281397 | Msa0374750:intron | 55.0% | |
| GGATGCATCAGGGAACTCAG+CGG | - | chr3_1:74281446-74281465 | Msa0374750:intron | 55.0% | |
| TTAGCCCATCCTCGTGTCTC+TGG | + | chr3_1:74281558-74281577 | None:intergenic | 55.0% | |
| CTGTCTCGACGTCCATCCAA+AGG | + | chr3_1:74281763-74281782 | None:intergenic | 55.0% | |
| TGTGGGCGTGGGGTTAATGG+TGG | + | chr3_1:74277005-74277024 | None:intergenic | 60.0% | |
| TGGTGTGGGCGTGGGGTTAA+TGG | + | chr3_1:74277008-74277027 | None:intergenic | 60.0% | |
| TGCAAAGTGGTGTGGGCGTG+GGG | + | chr3_1:74277015-74277034 | None:intergenic | 60.0% | |
| CTTGCAAAGTGGTGTGGGCG+TGG | + | chr3_1:74277017-74277036 | None:intergenic | 60.0% | |
| TGCACTTTGCAGGGTCTCCG+TGG | - | chr3_1:74278758-74278777 | Msa0374750:CDS | 60.0% | |
| ! | CGGGTTGGGGTGCATTCTGT+TGG | - | chr3_1:74280098-74280117 | Msa0374750:intron | 60.0% |
| GGATCGCCCTTATGCATCGC+AGG | - | chr3_1:74280643-74280662 | Msa0374750:intron | 60.0% | |
| CTAATCGGGAGAGACCGCCC+TGG | - | chr3_1:74280140-74280159 | Msa0374750:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 74276946 | 74281918 | 74276946 | ID=Msa0374750;Name=Msa0374750 |
| chr3_1 | mRNA | 74276946 | 74281918 | 74276946 | ID=Msa0374750-mRNA-1;Parent=Msa0374750;Name=Msa0374750-mRNA-1;_AED=0.08;_eAED=0.08;_QI=366|1|1|1|0.75|0.66|9|295|447 |
| chr3_1 | exon | 74276946 | 74277561 | 74276946 | ID=Msa0374750-mRNA-1:exon:17143;Parent=Msa0374750-mRNA-1 |
| chr3_1 | exon | 74277694 | 74277798 | 74277694 | ID=Msa0374750-mRNA-1:exon:17142;Parent=Msa0374750-mRNA-1 |
| chr3_1 | exon | 74278200 | 74278817 | 74278200 | ID=Msa0374750-mRNA-1:exon:17141;Parent=Msa0374750-mRNA-1 |
| chr3_1 | exon | 74279009 | 74279076 | 74279009 | ID=Msa0374750-mRNA-1:exon:17140;Parent=Msa0374750-mRNA-1 |
| chr3_1 | exon | 74279599 | 74279713 | 74279599 | ID=Msa0374750-mRNA-1:exon:17139;Parent=Msa0374750-mRNA-1 |
| chr3_1 | exon | 74280049 | 74280094 | 74280049 | ID=Msa0374750-mRNA-1:exon:17138;Parent=Msa0374750-mRNA-1 |
| chr3_1 | exon | 74280799 | 74280917 | 74280799 | ID=Msa0374750-mRNA-1:exon:17137;Parent=Msa0374750-mRNA-1 |
| chr3_1 | exon | 74281506 | 74281609 | 74281506 | ID=Msa0374750-mRNA-1:exon:17136;Parent=Msa0374750-mRNA-1 |
| chr3_1 | exon | 74281705 | 74281918 | 74281705 | ID=Msa0374750-mRNA-1:exon:17135;Parent=Msa0374750-mRNA-1 |
| chr3_1 | five_prime_UTR | 74281705 | 74281918 | 74281705 | ID=Msa0374750-mRNA-1:five_prime_utr;Parent=Msa0374750-mRNA-1 |
| chr3_1 | five_prime_UTR | 74281506 | 74281609 | 74281506 | ID=Msa0374750-mRNA-1:five_prime_utr;Parent=Msa0374750-mRNA-1 |
| chr3_1 | five_prime_UTR | 74280870 | 74280917 | 74280870 | ID=Msa0374750-mRNA-1:five_prime_utr;Parent=Msa0374750-mRNA-1 |
| chr3_1 | CDS | 74280799 | 74280869 | 74280799 | ID=Msa0374750-mRNA-1:cds;Parent=Msa0374750-mRNA-1 |
| chr3_1 | CDS | 74280049 | 74280094 | 74280049 | ID=Msa0374750-mRNA-1:cds;Parent=Msa0374750-mRNA-1 |
| chr3_1 | CDS | 74279599 | 74279713 | 74279599 | ID=Msa0374750-mRNA-1:cds;Parent=Msa0374750-mRNA-1 |
| chr3_1 | CDS | 74279009 | 74279076 | 74279009 | ID=Msa0374750-mRNA-1:cds;Parent=Msa0374750-mRNA-1 |
| chr3_1 | CDS | 74278200 | 74278817 | 74278200 | ID=Msa0374750-mRNA-1:cds;Parent=Msa0374750-mRNA-1 |
| chr3_1 | CDS | 74277694 | 74277798 | 74277694 | ID=Msa0374750-mRNA-1:cds;Parent=Msa0374750-mRNA-1 |
| chr3_1 | CDS | 74277241 | 74277561 | 74277241 | ID=Msa0374750-mRNA-1:cds;Parent=Msa0374750-mRNA-1 |
| chr3_1 | three_prime_UTR | 74276946 | 74277240 | 74276946 | ID=Msa0374750-mRNA-1:three_prime_utr;Parent=Msa0374750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
