AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0470970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0470970 MtrunA17_Chr3g0125671 99.457 368 2 0 1 368 1 368 0.0 750
Msa0470970 MtrunA17_Chr1g0159531 82.335 334 56 1 35 368 23 353 0.0 567
Msa0470970 MtrunA17_Chr1g0212071 28.000 325 200 8 47 363 25 323 2.42e-22 97.4
Msa0470970 MtrunA17_Chr1g0212071 30.415 217 133 5 114 328 146 346 4.79e-22 96.7
Msa0470970 MtrunA17_Chr4g0004901 33.735 166 107 2 117 282 395 557 1.04e-21 97.1
Msa0470970 MtrunA17_Chr4g0004901 32.500 160 104 4 123 282 453 608 2.52e-14 74.3
Msa0470970 MtrunA17_Chr4g0004901 32.624 141 92 3 115 255 495 632 4.45e-11 64.3
Msa0470970 MtrunA17_Chr2g0286991 29.767 215 134 2 114 328 306 503 1.10e-19 90.5
Msa0470970 MtrunA17_Chr2g0286991 32.127 221 110 6 138 321 124 341 3.59e-18 85.9
Msa0470970 MtrunA17_Chr2g0286991 28.431 204 129 3 123 326 393 579 9.07e-15 75.9
Msa0470970 MtrunA17_Chr2g0286991 26.582 237 139 6 113 349 229 430 3.38e-13 70.9
Msa0470970 MtrunA17_Chr2g0286991 31.159 138 80 2 195 332 128 250 6.08e-12 67.0
Msa0470970 MtrunA17_Chr2g0286991 23.944 213 135 3 77 264 374 584 2.80e-11 65.1
Msa0470970 MtrunA17_Chr1g0176031 34.320 169 107 4 115 282 174 339 1.27e-17 83.2
Msa0470970 MtrunA17_Chr1g0176031 29.231 195 111 4 114 283 121 313 5.09e-16 78.6
Msa0470970 MtrunA17_Chr1g0176031 27.103 214 134 4 133 329 84 292 4.05e-12 66.6
Msa0470970 MtrunA17_Chr4g0063841 31.183 186 102 2 123 282 201 386 1.42e-17 84.3
Msa0470970 MtrunA17_Chr7g0272131 34.437 151 97 2 127 277 387 535 2.80e-17 83.6
Msa0470970 MtrunA17_Chr7g0272131 34.731 167 106 3 117 283 403 566 1.02e-13 72.4
Msa0470970 MtrunA17_Chr7g0272131 27.888 251 143 8 115 361 273 489 2.47e-12 68.2
Msa0470970 MtrunA17_Chr1g0149351 26.721 247 124 4 123 313 210 455 1.57e-16 81.3
Msa0470970 MtrunA17_Chr1g0149351 26.442 208 139 2 123 330 184 377 2.71e-13 71.2
Msa0470970 MtrunA17_Chr1g0149351 28.324 173 119 5 113 282 464 634 4.31e-11 64.3
Msa0470970 MtrunA17_Chr1g0149351 32.967 91 61 0 192 282 174 264 7.97e-11 63.5
Msa0470970 MtrunA17_Chr3g0137771 25.926 216 107 3 111 273 196 411 2.56e-15 77.4
Msa0470970 MtrunA17_Chr3g0137771 31.868 91 62 0 192 282 172 262 5.33e-11 63.9
Msa0470970 MtrunA17_Chr4g0070541 31.892 185 121 4 92 274 468 649 8.15e-15 75.9
Msa0470970 MtrunA17_Chr4g0073771 23.077 286 181 7 31 278 1 285 1.50e-14 73.6
Msa0470970 MtrunA17_Chr1g0152951 32.086 187 120 5 77 261 257 438 2.84e-13 70.9
Msa0470970 MtrunA17_Chr4g0070521 29.952 207 130 5 92 286 99 302 5.39e-13 69.3
Msa0470970 MtrunA17_Chr8g0347711 24.000 300 158 7 96 348 83 359 5.63e-13 69.7
Msa0470970 MtrunA17_Chr4g0017381 30.000 150 100 2 115 264 155 299 1.12e-12 68.2
Msa0470970 MtrunA17_Chr4g0008501 27.547 265 168 8 76 324 302 558 1.77e-11 65.5
Msa0470970 MtrunA17_Chr8g0352431 29.907 214 125 6 64 264 366 567 3.35e-11 64.7
Msa0470970 MtrunA17_Chr2g0300611 28.750 160 111 2 128 286 509 666 4.57e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0470970 AT1G21410.2 73.889 360 82 3 21 368 1 360 0.0 533
Msa0470970 AT1G21410.1 73.889 360 82 3 21 368 1 360 0.0 533
Msa0470970 AT1G77000.2 70.718 362 93 3 10 368 9 360 0.0 522
Msa0470970 AT1G77000.1 70.718 362 93 3 10 368 9 360 0.0 522
Msa0470970 AT1G77000.3 68.908 238 64 1 10 247 9 236 8.52e-115 334
Msa0470970 AT1G77000.3 27.273 220 135 4 121 330 22 226 2.53e-12 66.6
Msa0470970 AT1G77000.4 68.908 238 64 1 10 247 9 236 8.52e-115 334
Msa0470970 AT1G77000.4 27.273 220 135 4 121 330 22 226 2.53e-12 66.6
Msa0470970 AT5G23340.1 30.469 256 155 6 114 354 136 383 1.76e-26 109
Msa0470970 AT5G23340.1 30.729 192 114 3 168 347 86 270 1.34e-18 87.0
Msa0470970 AT4G15475.1 29.870 231 141 5 98 328 372 581 8.96e-22 97.4
Msa0470970 AT4G15475.1 28.372 215 137 3 114 328 306 503 1.60e-20 93.6
Msa0470970 AT4G15475.1 27.670 206 146 3 77 282 193 395 3.45e-16 80.5
Msa0470970 AT4G15475.1 28.455 246 130 7 137 345 123 359 7.68e-15 76.3
Msa0470970 AT4G15475.1 24.766 214 132 4 77 264 374 584 2.15e-12 68.9
Msa0470970 AT3G58530.1 28.085 235 153 6 114 336 123 353 3.76e-19 88.2
Msa0470970 AT3G58530.1 25.962 208 134 4 141 332 94 297 1.75e-14 74.3
Msa0470970 AT5G01720.1 28.696 230 137 3 77 282 280 506 1.92e-18 87.4
Msa0470970 AT5G01720.1 26.848 257 136 7 113 342 83 314 3.87e-11 65.1
Msa0470970 AT5G27920.1 30.435 161 110 2 122 282 345 503 1.35e-15 78.6
Msa0470970 AT1G47056.1 33.537 164 103 4 111 272 267 426 2.76e-14 74.3
Msa0470970 AT5G25350.1 28.283 198 115 2 113 283 178 375 2.03e-13 72.0
Msa0470970 AT5G25350.1 28.384 229 142 6 130 341 143 366 4.94e-13 70.9
Msa0470970 AT2G25490.1 26.768 198 118 3 115 285 190 387 4.92e-13 70.9
Msa0470970 AT2G25490.1 33.766 154 93 4 135 280 124 276 3.77e-12 68.2
Msa0470970 AT2G25490.1 30.247 162 90 4 195 355 165 304 6.69e-12 67.4
Msa0470970 AT4G07400.1 31.515 165 108 3 122 284 310 471 2.59e-12 68.6
Msa0470970 AT2G06040.1 27.184 206 145 4 71 274 532 734 1.75e-11 66.2
Msa0470970 AT5G67140.1 25.862 232 113 9 42 267 10 188 1.77e-11 63.9
Msa0470970 AT5G57900.1 28.387 155 91 3 117 253 101 253 2.56e-11 64.3

Find 119 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTAGCTGTATAAATTTAT+TGG 0.193446 3_3:+73172400 Msa0470970:three_prime_UTR
AAATTCTTTGCCTTTGATTT+AGG 0.200211 3_3:-73169165 None:intergenic
TAAATCAAAGGCAAAGAATT+TGG 0.202365 3_3:+73169167 Msa0470970:five_prime_UTR
TCTAAACGTTGTTTGGCTTT+TGG 0.250293 3_3:+73172444 Msa0470970:three_prime_UTR
CCCTCCCCTCCCCTTTCCCT+TGG 0.294834 3_3:+73172233 Msa0470970:three_prime_UTR
GACTTCTTCTAAACGTTGTT+TGG 0.301228 3_3:+73172437 Msa0470970:three_prime_UTR
AATGCTCTGGCCTACCTTGC+TGG 0.303145 3_3:+73171312 Msa0470970:CDS
TTTAATTAATACCTCAACTA+TGG 0.308557 3_3:+73172336 Msa0470970:three_prime_UTR
CAAGGGAAAGGGGAGGGGAG+GGG 0.319112 3_3:-73172232 None:intergenic
CAGACGGTGATTCGAGCTTC+TGG 0.354879 3_3:+73170011 Msa0470970:CDS
ATTTGGCTTTATCTTCTAAA+CGG 0.360436 3_3:+73169184 Msa0470970:five_prime_UTR
TTGCTCGTTTATCACTTTCA+TGG 0.361295 3_3:+73170072 Msa0470970:CDS
ATCTGCATCAAAAGCTCAAC+AGG 0.369088 3_3:-73169969 None:intergenic
GAGAATCTTATGATGGTTGC+TGG 0.376471 3_3:+73169891 Msa0470970:CDS
CCTGCTCTCCACACATGCTC+AGG 0.394593 3_3:+73172038 Msa0470970:CDS
CTGAATGAATAACAGGCTAT+TGG 0.394963 3_3:+73171488 Msa0470970:intron
ACCAAGGGAAAGGGGAGGGG+AGG 0.397913 3_3:-73172234 None:intergenic
CAGTTGCAGTCTTTGAACCT+TGG 0.398849 3_3:+73171524 Msa0470970:CDS
ATAAATTTATACAGCTAAAC+AGG 0.399414 3_3:-73172397 None:intergenic
AGCTTCTGATACTGCACTTC+AGG 0.401548 3_3:+73171383 Msa0470970:CDS
ACTCACTCCTTCAGCTGTTC+AGG 0.403041 3_3:+73171998 Msa0470970:CDS
TGCCCTCACCTGAGGTCCCT+TGG 0.403174 3_3:+73171834 Msa0470970:CDS
TTCGAGGAAGTGCCCTTTGA+AGG 0.410954 3_3:+73172183 Msa0470970:three_prime_UTR
TGGAGAGATTCTATTTACTT+TGG 0.417618 3_3:+73170047 Msa0470970:CDS
CACAAAGCAAAGTGAAGAAC+AGG 0.424932 3_3:+73171904 Msa0470970:CDS
GGGTTGAACAGTGGTTAAAC+AGG 0.425400 3_3:+73172521 Msa0470970:three_prime_UTR
CCAAGGGAAAGGGGAGGGGA+GGG 0.426192 3_3:-73172233 None:intergenic
TGTGGCTGTGTCTATATAAC+AGG 0.428750 3_3:+73171623 Msa0470970:CDS
CTTCTGGTGTTTGTCGTGGT+TGG 0.432543 3_3:+73170027 Msa0470970:CDS
TTTGGCTTTATCTTCTAAAC+GGG 0.438350 3_3:+73169185 Msa0470970:five_prime_UTR
TACACCAAGGGAAAGGGGAG+GGG 0.439192 3_3:-73172237 None:intergenic
CAAACTTGGGAACAAGAGAT+AGG 0.439501 3_3:-73171083 None:intergenic
CAACTGGACGACAATGTTGT+TGG 0.451784 3_3:+73171144 Msa0470970:CDS
CATATCTACACCAAGGGAAA+GGG 0.452127 3_3:-73172243 None:intergenic
CCTGAGCATGTGTGGAGAGC+AGG 0.456485 3_3:-73172038 None:intergenic
AGACAATGCCATGTATTCAT+TGG 0.463323 3_3:+73171881 Msa0470970:CDS
TGCTGAGGTCAAGAATCTGC+AGG 0.470249 3_3:-73171191 None:intergenic
TCGTCAAGATAAGCCACAAC+TGG 0.470692 3_3:+73171128 Msa0470970:CDS
TTGGTGAAGGGAAACTGAAA+TGG 0.472951 3_3:+73169824 Msa0470970:exon
AGCATTTAGTGACAATGCTC+TGG 0.474697 3_3:+73171299 Msa0470970:CDS
TCACTGTATGCTATTGCTCA+TGG 0.475331 3_3:+73171237 Msa0470970:CDS
CACTTCTCCGAGCCCTTCAA+AGG 0.480132 3_3:-73172196 None:intergenic
CATGTGGTTTATTAATGAGC+AGG 0.481617 3_3:-73172158 None:intergenic
GATGCAGATTCTGTCTCTTG+TGG 0.484308 3_3:+73169983 Msa0470970:CDS
TGTGACAAAGTTGGTGATGT+TGG 0.489189 3_3:+73171551 Msa0470970:CDS
AAATCAACTGTTCTTAGATC+AGG 0.489805 3_3:-73171599 None:intergenic
TGCAGTCTTTGAACCTTGGA+TGG 0.491087 3_3:+73171528 Msa0470970:CDS
AGTACAGTCCAAGGGACCTC+AGG 0.495892 3_3:-73171842 None:intergenic
ATATGTTTGTGACTTTATGT+TGG 0.498136 3_3:+73172261 Msa0470970:three_prime_UTR
AGATGATAGTGTGATTGCTT+TGG 0.499364 3_3:+73171803 Msa0470970:intron
GTTTATTAATGAGCAGGATG+AGG 0.501557 3_3:-73172152 None:intergenic
TAATAAACCACATGACTTCG+AGG 0.510111 3_3:+73172167 Msa0470970:exon
ACATATCTACACCAAGGGAA+AGG 0.512309 3_3:-73172244 None:intergenic
ATGGTTGCTGGTGGTGAGAA+AGG 0.513155 3_3:+73169903 Msa0470970:CDS
AGTATGAGCACAACAACAAA+TGG 0.514689 3_3:-73172307 None:intergenic
AGTGTGATTGCTTTGGCAAA+CGG 0.522528 3_3:+73171810 Msa0470970:CDS
GCAAAGTGAAGAACAGGATG+TGG 0.523649 3_3:+73171910 Msa0470970:CDS
GAAATGATGAAGATGGACTA+AGG 0.526857 3_3:+73171949 Msa0470970:CDS
CACTCCTTCAGCTGTTCAGG+CGG 0.526906 3_3:+73172001 Msa0470970:CDS
GAAGGGAAACTGAAATGGTT+GGG 0.529142 3_3:+73169829 Msa0470970:exon
CAACTTTGTCACACCATCCA+AGG 0.529983 3_3:-73171541 None:intergenic
CTGCTCTCCACACATGCTCA+GGG 0.533137 3_3:+73172039 Msa0470970:CDS
AAAGGAGGGAACATGAAGGT+TGG 0.533533 3_3:+73169921 Msa0470970:CDS
TCGAGGAAGTGCCCTTTGAA+GGG 0.540167 3_3:+73172184 Msa0470970:three_prime_UTR
GTCCAAGGGACCTCAGGTGA+GGG 0.542888 3_3:-73171836 None:intergenic
GTCTCTTGTGGATGATCAGA+CGG 0.544667 3_3:+73169995 Msa0470970:CDS
TTTATTGGAAGACATGGACT+TGG 0.545315 3_3:+73172415 Msa0470970:three_prime_UTR
CTACACCAAGGGAAAGGGGA+GGG 0.546712 3_3:-73172238 None:intergenic
GAAGTCCATTGTGCTTGTGC+TGG 0.549870 3_3:+73172101 Msa0470970:CDS
GCTTTGTGCCAATGAATACA+TGG 0.550039 3_3:-73171889 None:intergenic
CGAGCTTCTGGTGTTTGTCG+TGG 0.551970 3_3:+73170023 Msa0470970:CDS
ACAACATTGTCGTCCAGTTG+TGG 0.553257 3_3:-73171141 None:intergenic
TATAAATTTATTGGAAGACA+TGG 0.554470 3_3:+73172409 Msa0470970:three_prime_UTR
CTGAAAGTTCTAAATCTATG+TGG 0.556057 3_3:+73171348 Msa0470970:CDS
TTTATTAATGAGCAGGATGA+GGG 0.556509 3_3:-73172151 None:intergenic
ACTTCTCCGAGCCCTTCAAA+GGG 0.556622 3_3:-73172195 None:intergenic
TCTACAGAAACCAGCAAGGT+AGG 0.559137 3_3:-73171322 None:intergenic
TGAAGGGAAACTGAAATGGT+TGG 0.561758 3_3:+73169828 Msa0470970:exon
GTTGCTGGTGGTGAGAAAGG+AGG 0.562599 3_3:+73169906 Msa0470970:CDS
AAAGGAGGAAATGATGAAGA+TGG 0.563283 3_3:+73171942 Msa0470970:CDS
CAAAGTGAAGAACAGGATGT+GGG 0.569923 3_3:+73171911 Msa0470970:CDS
GAAGGATAATTTAAAGACTG+AGG 0.570173 3_3:+73169851 Msa0470970:CDS
AAGGAGTGAGTGAAGTGCAC+TGG 0.570780 3_3:-73171986 None:intergenic
GGAAACTGAAATGGTTGGGA+AGG 0.572501 3_3:+73169833 Msa0470970:exon
TTACAAAGAACCTAAATCAA+AGG 0.578232 3_3:+73169155 Msa0470970:five_prime_UTR
GAGGGAAAGCGTTCATTGCA+CGG 0.578968 3_3:-73172133 None:intergenic
GGCACTTCCTCGAAGTCATG+TGG 0.591410 3_3:-73172174 None:intergenic
AGGATGTGGGGATCTGTGAA+AGG 0.597813 3_3:+73171924 Msa0470970:CDS
ATCTTAAAAGTCCATAGTTG+AGG 0.598502 3_3:-73172347 None:intergenic
CACAAACATATCTACACCAA+GGG 0.599633 3_3:-73172249 None:intergenic
ATATCTACACCAAGGGAAAG+GGG 0.602438 3_3:-73172242 None:intergenic
TCTTGCAGAAGTACAGTCCA+AGG 0.602542 3_3:-73171851 None:intergenic
TTGCTGGTGGTGAGAAAGGA+GGG 0.605825 3_3:+73169907 Msa0470970:CDS
AGCACAAGCACAATGGACTT+CGG 0.606895 3_3:-73172099 None:intergenic
GGAGTGATGAGTCTAGCATA+TGG 0.608969 3_3:+73171572 Msa0470970:CDS
GAAGTGCCCTTTGAAGGGCT+CGG 0.610683 3_3:+73172189 Msa0470970:three_prime_UTR
AGTCCAAGGGACCTCAGGTG+AGG 0.614611 3_3:-73171837 None:intergenic
CAAACGGATGCCCTCACCTG+AGG 0.618431 3_3:+73171826 Msa0470970:CDS
AATGCCTCCCTGAGCATGTG+TGG 0.621155 3_3:-73172046 None:intergenic
TGAGAAAGGAGGGAACATGA+AGG 0.625459 3_3:+73169917 Msa0470970:CDS
CTGACAAAACTAAACATCAG+TGG 0.630947 3_3:+73171270 Msa0470970:CDS
GTTGTGGCTTATCTTGACGA+AGG 0.635647 3_3:-73171125 None:intergenic
TGGTGTGATCACTGAATGGA+AGG 0.636114 3_3:+73169941 Msa0470970:CDS
AGGTTGGTGTGATCACTGAA+TGG 0.638216 3_3:+73169937 Msa0470970:CDS
TAACAAGAACATGAACAACT+TGG 0.639202 3_3:+73171059 Msa0470970:CDS
CAAACCGCCTGAACAGCTGA+AGG 0.645204 3_3:-73172005 None:intergenic
CTAAGAACAGTTGATTTGTG+TGG 0.647210 3_3:+73171605 Msa0470970:CDS
AGGCATTCACTCATCATGAG+TGG 0.653984 3_3:+73172062 Msa0470970:CDS
CATGACCAGCACAAGCACAA+TGG 0.654961 3_3:-73172106 None:intergenic
TCTACACCAAGGGAAAGGGG+AGG 0.657469 3_3:-73172239 None:intergenic
TTTGAATGTGGGTTGAACAG+TGG 0.659447 3_3:+73172512 Msa0470970:intron
CTTGGATGGTGTGACAAAGT+TGG 0.660586 3_3:+73171542 Msa0470970:CDS
ATGTGGGGATCTGTGAAAGG+AGG 0.661005 3_3:+73171927 Msa0470970:CDS
ATGAAAGTGATAAACGAGCA+AGG 0.662700 3_3:-73170070 None:intergenic
TCACAAACATATCTACACCA+AGG 0.668416 3_3:-73172250 None:intergenic
CTCTCCACACATGCTCAGGG+AGG 0.670816 3_3:+73172042 Msa0470970:CDS
AAAGTGAAGAACAGGATGTG+GGG 0.676311 3_3:+73171912 Msa0470970:CDS
CTTGCAGAAGTACAGTCCAA+GGG 0.678760 3_3:-73171850 None:intergenic
AATCTTATGATGGTTGCTGG+TGG 0.732364 3_3:+73169894 Msa0470970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGATAATTACAATTATAAT+TGG - chr3_3:73169651-73169670 None:intergenic 10.0%
!!! TTATTAATTGATTAAAGTTT+TGG + chr3_3:73169736-73169755 Msa0470970:intron 10.0%
!!! TTTTTTGTTTAAATTGATTT+TGG + chr3_3:73170205-73170224 Msa0470970:intron 10.0%
!!! GTTCTTTGTAATAATTTTTA+GGG - chr3_3:73169146-73169165 None:intergenic 15.0%
!! AAAACAAAAAATGATAGTTA+AGG - chr3_3:73169223-73169242 None:intergenic 15.0%
!!! AAAACTTTATCATTTTTTTC+TGG - chr3_3:73169306-73169325 None:intergenic 15.0%
!!! ATATTATTCATCAATTCTTT+TGG + chr3_3:73170262-73170281 Msa0470970:intron 15.0%
!!! GGTTCTTTGTAATAATTTTT+AGG - chr3_3:73169147-73169166 None:intergenic 20.0%
!!! TTTTTTGTTTTACTCTTTCA+CGG + chr3_3:73169232-73169251 Msa0470970:intron 20.0%
!! TGTAATTGAGAAACTTATTA+TGG + chr3_3:73169549-73169568 Msa0470970:intron 20.0%
!! GTAATTGAGAAACTTATTAT+GGG + chr3_3:73169550-73169569 Msa0470970:intron 20.0%
!!! ATAAAGGGTCTATTTTTTTA+AGG - chr3_3:73169599-73169618 None:intergenic 20.0%
!!! TGAAACTATTTTTCTCAAAT+TGG + chr3_3:73170155-73170174 Msa0470970:intron 20.0%
!!! GAAACTATTTTTCTCAAATT+GGG + chr3_3:73170156-73170175 Msa0470970:intron 20.0%
!!! AAACTATTTTTCTCAAATTG+GGG + chr3_3:73170157-73170176 Msa0470970:intron 20.0%
!! GATGAATAATATTGAAAACA+TGG - chr3_3:73170254-73170273 None:intergenic 20.0%
!!! ATTTTGATGTTTTCAAAATG+TGG + chr3_3:73170398-73170417 Msa0470970:intron 20.0%
!! ATTAAACTGTATATTCAAAC+AGG + chr3_3:73170613-73170632 Msa0470970:intron 20.0%
!! TTAAACTGTATATTCAAACA+GGG + chr3_3:73170614-73170633 Msa0470970:intron 20.0%
!! TAAGAAATTGAATTCAACAT+TGG - chr3_3:73170899-73170918 None:intergenic 20.0%
!! TGTTCATAAAACTATAAAAG+TGG + chr3_3:73170962-73170981 Msa0470970:intron 20.0%
!! CAATCATATTAAAACTAAGA+TGG + chr3_3:73171436-73171455 Msa0470970:intron 20.0%
!! TTTAATTAATACCTCAACTA+TGG + chr3_3:73172336-73172355 Msa0470970:three_prime_UTR 20.0%
!! ATAAATTTATACAGCTAAAC+AGG - chr3_3:73172400-73172419 None:intergenic 20.0%
!! GTTTAGCTGTATAAATTTAT+TGG + chr3_3:73172400-73172419 Msa0470970:three_prime_UTR 20.0%
!! TATAAATTTATTGGAAGACA+TGG + chr3_3:73172409-73172428 Msa0470970:three_prime_UTR 20.0%
!!! GTAATAATTTTTAGGGTGTT+TGG - chr3_3:73169139-73169158 None:intergenic 25.0%
! TTACAAAGAACCTAAATCAA+AGG + chr3_3:73169155-73169174 Msa0470970:five_prime_UTR 25.0%
!! AAATTCTTTGCCTTTGATTT+AGG - chr3_3:73169168-73169187 None:intergenic 25.0%
! TAAATCAAAGGCAAAGAATT+TGG + chr3_3:73169167-73169186 Msa0470970:five_prime_UTR 25.0%
!!! ATTTGGCTTTATCTTCTAAA+CGG + chr3_3:73169184-73169203 Msa0470970:five_prime_UTR 25.0%
! AAAAATGATAGTTAAGGAAG+TGG - chr3_3:73169217-73169236 None:intergenic 25.0%
! AATCATCAAGAAATGAAAGT+GGG - chr3_3:73169342-73169361 None:intergenic 25.0%
! ACAAAGCCAAAATATTAAGA+GGG - chr3_3:73169373-73169392 None:intergenic 25.0%
!!! GCACTTTTTTTAATCAAACA+AGG - chr3_3:73169421-73169440 None:intergenic 25.0%
!!! AAAGTTTTGGAATTTTGCTA+TGG + chr3_3:73169749-73169768 Msa0470970:intron 25.0%
!!! GTTTTTTGAGAATCTTATGA+TGG + chr3_3:73169884-73169903 Msa0470970:CDS 25.0%
!!! ATGAATTGCTTACTTTTGAA+GGG + chr3_3:73170328-73170347 Msa0470970:intron 25.0%
!!! ATATGTGAGTTTTATTGACA+TGG - chr3_3:73170380-73170399 None:intergenic 25.0%
! TAAAGTAAACAAAAGCTACA+GGG - chr3_3:73170719-73170738 None:intergenic 25.0%
!! ATTATGTAATTCCTCTTTTC+AGG + chr3_3:73171034-73171053 Msa0470970:intron 25.0%
! GTTTATAACGAGTGTAATTT+CGG + chr3_3:73171770-73171789 Msa0470970:intron 25.0%
! ATATGTTTGTGACTTTATGT+TGG + chr3_3:73172261-73172280 Msa0470970:three_prime_UTR 25.0%
!! TTTGGCTTTATCTTCTAAAC+GGG + chr3_3:73169185-73169204 Msa0470970:five_prime_UTR 30.0%
GAATCATCAAGAAATGAAAG+TGG - chr3_3:73169343-73169362 None:intergenic 30.0%
CACAAAGCCAAAATATTAAG+AGG - chr3_3:73169374-73169393 None:intergenic 30.0%
!!! AGTTTTAAACACAGAACAAG+TGG - chr3_3:73169497-73169516 None:intergenic 30.0%
!! CATCAGAATTCTTTGATTTG+TGG + chr3_3:73169703-73169722 Msa0470970:intron 30.0%
!!! CTAGGAAAGTTGATGATTTT+TGG + chr3_3:73169805-73169824 Msa0470970:five_prime_UTR 30.0%
!!! AAGTTGATGATTTTTGGTGA+AGG + chr3_3:73169811-73169830 Msa0470970:five_prime_UTR 30.0%
!!! AGTTGATGATTTTTGGTGAA+GGG + chr3_3:73169812-73169831 Msa0470970:five_prime_UTR 30.0%
GAAGGATAATTTAAAGACTG+AGG + chr3_3:73169851-73169870 Msa0470970:CDS 30.0%
TGGAGAGATTCTATTTACTT+TGG + chr3_3:73170047-73170066 Msa0470970:CDS 30.0%
!! TCAAATTGGGGTATTTTTCT+TGG + chr3_3:73170169-73170188 Msa0470970:intron 30.0%
!! GATGAATTGCTTACTTTTGA+AGG + chr3_3:73170327-73170346 Msa0470970:intron 30.0%
!! TGAATTGCTTACTTTTGAAG+GGG + chr3_3:73170329-73170348 Msa0470970:intron 30.0%
! TTGATGTTTTCAAAATGTGG+TGG + chr3_3:73170401-73170420 Msa0470970:intron 30.0%
! TTAAGTTGTTCATCCAAACA+GGG + chr3_3:73170577-73170596 Msa0470970:intron 30.0%
GTAAAGTAAACAAAAGCTAC+AGG - chr3_3:73170720-73170739 None:intergenic 30.0%
CCAACTTCAGAAATTATAAG+AGG - chr3_3:73170776-73170795 None:intergenic 30.0%
!! CCTCTTATAATTTCTGAAGT+TGG + chr3_3:73170773-73170792 Msa0470970:intron 30.0%
GTTGACGTTATAATGTTTCT+TGG + chr3_3:73170854-73170873 Msa0470970:intron 30.0%
ATTGAATTCAACATTGGAAC+CGG - chr3_3:73170893-73170912 None:intergenic 30.0%
TAACAAGAACATGAACAACT+TGG + chr3_3:73171059-73171078 Msa0470970:CDS 30.0%
!!! TGTTTAGTTTTGTCAGATCA+CGG - chr3_3:73171266-73171285 None:intergenic 30.0%
!! CTGAAAGTTCTAAATCTATG+TGG + chr3_3:73171348-73171367 Msa0470970:CDS 30.0%
TTCATTCAGTAATGTCTCAT+GGG - chr3_3:73171477-73171496 None:intergenic 30.0%
ATTCATTCAGTAATGTCTCA+TGG - chr3_3:73171478-73171497 None:intergenic 30.0%
GACATTACTGAATGAATAAC+AGG + chr3_3:73171481-73171500 Msa0470970:intron 30.0%
AAATCAACTGTTCTTAGATC+AGG - chr3_3:73171602-73171621 None:intergenic 30.0%
TTTATTAATGAGCAGGATGA+GGG - chr3_3:73172154-73172173 None:intergenic 30.0%
ATCTTAAAAGTCCATAGTTG+AGG - chr3_3:73172350-73172369 None:intergenic 30.0%
! CACTTGCCCTCTTAATATTT+TGG + chr3_3:73169364-73169383 Msa0470970:intron 35.0%
AATTTGCAGAAAGCAACATG+GGG - chr3_3:73169674-73169693 None:intergenic 35.0%
CAATTTGCAGAAAGCAACAT+GGG - chr3_3:73169675-73169694 None:intergenic 35.0%
ATGAAAGTGATAAACGAGCA+AGG - chr3_3:73170073-73170092 None:intergenic 35.0%
TTGCTCGTTTATCACTTTCA+TGG + chr3_3:73170072-73170091 Msa0470970:CDS 35.0%
AATATTGAAAACATGGCACC+AGG - chr3_3:73170247-73170266 None:intergenic 35.0%
CAGAAAATGTATAGCTGAGA+AGG + chr3_3:73170441-73170460 Msa0470970:intron 35.0%
! ATAGCTGAGAAGGATTTGTT+TGG + chr3_3:73170451-73170470 Msa0470970:intron 35.0%
! TGAGAAGGATTTGTTTGGAT+TGG + chr3_3:73170456-73170475 Msa0470970:intron 35.0%
! AGGATTTGTTTGGATTGGAT+TGG + chr3_3:73170461-73170480 Msa0470970:intron 35.0%
! CTTAAGTTGTTCATCCAAAC+AGG + chr3_3:73170576-73170595 Msa0470970:intron 35.0%
TTCCACAGCAAAAATACAAC+AGG - chr3_3:73170661-73170680 None:intergenic 35.0%
AGATTTATTCCAGGAATGCA+GGG - chr3_3:73170803-73170822 None:intergenic 35.0%
AAGACTTGCAGATTTATTCC+AGG - chr3_3:73170812-73170831 None:intergenic 35.0%
AAAAGATGGGGGAAAATCAA+CGG - chr3_3:73170926-73170945 None:intergenic 35.0%
TTCTTGTTACACCTGAAAAG+AGG - chr3_3:73171048-73171067 None:intergenic 35.0%
! GTTTGCAGTTTTGCAAACTT+GGG - chr3_3:73171099-73171118 None:intergenic 35.0%
! AGTTTGCAGTTTTGCAAACT+TGG - chr3_3:73171100-73171119 None:intergenic 35.0%
CTGACAAAACTAAACATCAG+TGG + chr3_3:73171270-73171289 Msa0470970:CDS 35.0%
ACTGCACTTCAGGTATTATA+TGG + chr3_3:73171393-73171412 Msa0470970:intron 35.0%
TCATTCAGTAATGTCTCATG+GGG - chr3_3:73171476-73171495 None:intergenic 35.0%
CTGAATGAATAACAGGCTAT+TGG + chr3_3:73171488-73171507 Msa0470970:intron 35.0%
!! CTAAGAACAGTTGATTTGTG+TGG + chr3_3:73171605-73171624 Msa0470970:CDS 35.0%
! AGATGATAGTGTGATTGCTT+TGG + chr3_3:73171803-73171822 Msa0470970:intron 35.0%
AGACAATGCCATGTATTCAT+TGG + chr3_3:73171881-73171900 Msa0470970:CDS 35.0%
AAAGGAGGAAATGATGAAGA+TGG + chr3_3:73171942-73171961 Msa0470970:CDS 35.0%
!! GAAATGATGAAGATGGACTA+AGG + chr3_3:73171949-73171968 Msa0470970:CDS 35.0%
GTTTATTAATGAGCAGGATG+AGG - chr3_3:73172155-73172174 None:intergenic 35.0%
CATGTGGTTTATTAATGAGC+AGG - chr3_3:73172161-73172180 None:intergenic 35.0%
TAATAAACCACATGACTTCG+AGG + chr3_3:73172167-73172186 Msa0470970:exon 35.0%
CACAAACATATCTACACCAA+GGG - chr3_3:73172252-73172271 None:intergenic 35.0%
TCACAAACATATCTACACCA+AGG - chr3_3:73172253-73172272 None:intergenic 35.0%
AGTATGAGCACAACAACAAA+TGG - chr3_3:73172310-73172329 None:intergenic 35.0%
TTTATTGGAAGACATGGACT+TGG + chr3_3:73172415-73172434 Msa0470970:three_prime_UTR 35.0%
GACTTCTTCTAAACGTTGTT+TGG + chr3_3:73172437-73172456 Msa0470970:three_prime_UTR 35.0%
!!! TCTAAACGTTGTTTGGCTTT+TGG + chr3_3:73172444-73172463 Msa0470970:three_prime_UTR 35.0%
TATGTATTTGTCTCCCATGA+CGG + chr3_3:73172481-73172500 Msa0470970:intron 35.0%
GGCATGCACATACACAAAAT+AGG - chr3_3:73169400-73169419 None:intergenic 40.0%
GCAATTTGCAGAAAGCAACA+TGG - chr3_3:73169676-73169695 None:intergenic 40.0%
! CTTATCCTTTTGTGACAGCT+AGG + chr3_3:73169787-73169806 Msa0470970:intron 40.0%
ACTTTCCTAGCTGTCACAAA+AGG - chr3_3:73169795-73169814 None:intergenic 40.0%
TTGGTGAAGGGAAACTGAAA+TGG + chr3_3:73169824-73169843 Msa0470970:exon 40.0%
TGAAGGGAAACTGAAATGGT+TGG + chr3_3:73169828-73169847 Msa0470970:exon 40.0%
GAAGGGAAACTGAAATGGTT+GGG + chr3_3:73169829-73169848 Msa0470970:exon 40.0%
GAGAATCTTATGATGGTTGC+TGG + chr3_3:73169891-73169910 Msa0470970:CDS 40.0%
AATCTTATGATGGTTGCTGG+TGG + chr3_3:73169894-73169913 Msa0470970:CDS 40.0%
ATCTGCATCAAAAGCTCAAC+AGG - chr3_3:73169972-73169991 None:intergenic 40.0%
!! GTCCTGTTGTATTTTTGCTG+TGG + chr3_3:73170656-73170675 Msa0470970:intron 40.0%
GATTTATTCCAGGAATGCAG+GGG - chr3_3:73170802-73170821 None:intergenic 40.0%
CAGATTTATTCCAGGAATGC+AGG - chr3_3:73170804-73170823 None:intergenic 40.0%
TGAGATGAGTGCAAAAGATG+GGG - chr3_3:73170938-73170957 None:intergenic 40.0%
CTGAGATGAGTGCAAAAGAT+GGG - chr3_3:73170939-73170958 None:intergenic 40.0%
!! ATTGTGAAGTGCATTGACTG+TGG + chr3_3:73171001-73171020 Msa0470970:intron 40.0%
CAAACTTGGGAACAAGAGAT+AGG - chr3_3:73171086-73171105 None:intergenic 40.0%
! TGAGCTTGAAACTTTTGCTG+AGG - chr3_3:73171209-73171228 None:intergenic 40.0%
TCACTGTATGCTATTGCTCA+TGG + chr3_3:73171237-73171256 Msa0470970:CDS 40.0%
AGCATTTAGTGACAATGCTC+TGG + chr3_3:73171299-73171318 Msa0470970:CDS 40.0%
! GTTTTCTACAGAAACCAGCA+AGG - chr3_3:73171329-73171348 None:intergenic 40.0%
CATTCAGTAATGTCTCATGG+GGG - chr3_3:73171475-73171494 None:intergenic 40.0%
!! TGTGACAAAGTTGGTGATGT+TGG + chr3_3:73171551-73171570 Msa0470970:CDS 40.0%
TGTGGCTGTGTCTATATAAC+AGG + chr3_3:73171623-73171642 Msa0470970:CDS 40.0%
AGTGTGATTGCTTTGGCAAA+CGG + chr3_3:73171810-73171829 Msa0470970:CDS 40.0%
GCTTTGTGCCAATGAATACA+TGG - chr3_3:73171892-73171911 None:intergenic 40.0%
CACAAAGCAAAGTGAAGAAC+AGG + chr3_3:73171904-73171923 Msa0470970:CDS 40.0%
CAAAGTGAAGAACAGGATGT+GGG + chr3_3:73171911-73171930 Msa0470970:CDS 40.0%
AAAGTGAAGAACAGGATGTG+GGG + chr3_3:73171912-73171931 Msa0470970:CDS 40.0%
ATATCTACACCAAGGGAAAG+GGG - chr3_3:73172245-73172264 None:intergenic 40.0%
CATATCTACACCAAGGGAAA+GGG - chr3_3:73172246-73172265 None:intergenic 40.0%
ACATATCTACACCAAGGGAA+AGG - chr3_3:73172247-73172266 None:intergenic 40.0%
ATGTATTTGTCTCCCATGAC+GGG + chr3_3:73172482-73172501 Msa0470970:intron 40.0%
! TTTGAATGTGGGTTGAACAG+TGG + chr3_3:73172512-73172531 Msa0470970:intron 40.0%
GGAAACTGAAATGGTTGGGA+AGG + chr3_3:73169833-73169852 Msa0470970:exon 45.0%
TGAGAAAGGAGGGAACATGA+AGG + chr3_3:73169917-73169936 Msa0470970:CDS 45.0%
AAAGGAGGGAACATGAAGGT+TGG + chr3_3:73169921-73169940 Msa0470970:CDS 45.0%
!! AGGTTGGTGTGATCACTGAA+TGG + chr3_3:73169937-73169956 Msa0470970:CDS 45.0%
TGGTGTGATCACTGAATGGA+AGG + chr3_3:73169941-73169960 Msa0470970:CDS 45.0%
GATGCAGATTCTGTCTCTTG+TGG + chr3_3:73169983-73170002 Msa0470970:CDS 45.0%
GTCTCTTGTGGATGATCAGA+CGG + chr3_3:73169995-73170014 Msa0470970:CDS 45.0%
GGTTCTTCAATTCCTGATCC+TGG + chr3_3:73170226-73170245 Msa0470970:intron 45.0%
GCTTATGACTTAGCCCTGTT+TGG - chr3_3:73170593-73170612 None:intergenic 45.0%
TCTTGGAGATCATAGCACAC+CGG + chr3_3:73170871-73170890 Msa0470970:intron 45.0%
GAGATGAGTGCAAAAGATGG+GGG - chr3_3:73170937-73170956 None:intergenic 45.0%
CCTGAGATGAGTGCAAAAGA+TGG - chr3_3:73170940-73170959 None:intergenic 45.0%
! CCATCTTTTGCACTCATCTC+AGG + chr3_3:73170937-73170956 Msa0470970:intron 45.0%
GTTGTGGCTTATCTTGACGA+AGG - chr3_3:73171128-73171147 None:intergenic 45.0%
TCGTCAAGATAAGCCACAAC+TGG + chr3_3:73171128-73171147 Msa0470970:CDS 45.0%
ACAACATTGTCGTCCAGTTG+TGG - chr3_3:73171144-73171163 None:intergenic 45.0%
CAACTGGACGACAATGTTGT+TGG + chr3_3:73171144-73171163 Msa0470970:CDS 45.0%
TCTACAGAAACCAGCAAGGT+AGG - chr3_3:73171325-73171344 None:intergenic 45.0%
AGCTTCTGATACTGCACTTC+AGG + chr3_3:73171383-73171402 Msa0470970:CDS 45.0%
CAGTTGCAGTCTTTGAACCT+TGG + chr3_3:73171524-73171543 Msa0470970:CDS 45.0%
TGCAGTCTTTGAACCTTGGA+TGG + chr3_3:73171528-73171547 Msa0470970:CDS 45.0%
CAACTTTGTCACACCATCCA+AGG - chr3_3:73171544-73171563 None:intergenic 45.0%
CTTGGATGGTGTGACAAAGT+TGG + chr3_3:73171542-73171561 Msa0470970:CDS 45.0%
GGAGTGATGAGTCTAGCATA+TGG + chr3_3:73171572-73171591 Msa0470970:CDS 45.0%
! CTTGCAGAAGTACAGTCCAA+GGG - chr3_3:73171853-73171872 None:intergenic 45.0%
! TCTTGCAGAAGTACAGTCCA+AGG - chr3_3:73171854-73171873 None:intergenic 45.0%
GCAAAGTGAAGAACAGGATG+TGG + chr3_3:73171910-73171929 Msa0470970:CDS 45.0%
AGGCATTCACTCATCATGAG+TGG + chr3_3:73172062-73172081 Msa0470970:CDS 45.0%
! AGCACAAGCACAATGGACTT+CGG - chr3_3:73172102-73172121 None:intergenic 45.0%
TGTATTTGTCTCCCATGACG+GGG + chr3_3:73172483-73172502 Msa0470970:intron 45.0%
GGGTTGAACAGTGGTTAAAC+AGG + chr3_3:73172521-73172540 Msa0470970:three_prime_UTR 45.0%
!! AAATAAAAAACAAAAATAAA+GGG - chr3_3:73169614-73169633 None:intergenic 5.0%
!! AAAATAAAAAACAAAAATAA+AGG - chr3_3:73169615-73169634 None:intergenic 5.0%
! ATGGTTGCTGGTGGTGAGAA+AGG + chr3_3:73169903-73169922 Msa0470970:CDS 50.0%
! TTGCTGGTGGTGAGAAAGGA+GGG + chr3_3:73169907-73169926 Msa0470970:CDS 50.0%
CTTCTGGTGTTTGTCGTGGT+TGG + chr3_3:73170027-73170046 Msa0470970:CDS 50.0%
GAAAACATGGCACCAGGATC+AGG - chr3_3:73170241-73170260 None:intergenic 50.0%
TGCTGAGGTCAAGAATCTGC+AGG - chr3_3:73171194-73171213 None:intergenic 50.0%
AGGATGTGGGGATCTGTGAA+AGG + chr3_3:73171924-73171943 Msa0470970:CDS 50.0%
ATGTGGGGATCTGTGAAAGG+AGG + chr3_3:73171927-73171946 Msa0470970:CDS 50.0%
AAGGAGTGAGTGAAGTGCAC+TGG - chr3_3:73171989-73172008 None:intergenic 50.0%
ACTCACTCCTTCAGCTGTTC+AGG + chr3_3:73171998-73172017 Msa0470970:CDS 50.0%
GAAGTCCATTGTGCTTGTGC+TGG + chr3_3:73172101-73172120 Msa0470970:CDS 50.0%
CATGACCAGCACAAGCACAA+TGG - chr3_3:73172109-73172128 None:intergenic 50.0%
!! GAGGGAAAGCGTTCATTGCA+CGG - chr3_3:73172136-73172155 None:intergenic 50.0%
!! TTCGAGGAAGTGCCCTTTGA+AGG + chr3_3:73172183-73172202 Msa0470970:three_prime_UTR 50.0%
!! TCGAGGAAGTGCCCTTTGAA+GGG + chr3_3:73172184-73172203 Msa0470970:three_prime_UTR 50.0%
ACTTCTCCGAGCCCTTCAAA+GGG - chr3_3:73172198-73172217 None:intergenic 50.0%
TCAAAAGCCAACCCCGTCAT+GGG - chr3_3:73172497-73172516 None:intergenic 50.0%
TTCAAAAGCCAACCCCGTCA+TGG - chr3_3:73172498-73172517 None:intergenic 50.0%
!!! ACGGGGTTGGCTTTTGAATG+TGG + chr3_3:73172500-73172519 Msa0470970:intron 50.0%
!!! CGGGGTTGGCTTTTGAATGT+GGG + chr3_3:73172501-73172520 Msa0470970:intron 50.0%
! GTTGCTGGTGGTGAGAAAGG+AGG + chr3_3:73169906-73169925 Msa0470970:CDS 55.0%
CAGACGGTGATTCGAGCTTC+TGG + chr3_3:73170011-73170030 Msa0470970:CDS 55.0%
CGAGCTTCTGGTGTTTGTCG+TGG + chr3_3:73170023-73170042 Msa0470970:CDS 55.0%
! GTTGGTTTCCCCTGCATTCC+TGG + chr3_3:73170791-73170810 Msa0470970:intron 55.0%
AATGCTCTGGCCTACCTTGC+TGG + chr3_3:73171312-73171331 Msa0470970:CDS 55.0%
AGTACAGTCCAAGGGACCTC+AGG - chr3_3:73171845-73171864 None:intergenic 55.0%
CACTCCTTCAGCTGTTCAGG+CGG + chr3_3:73172001-73172020 Msa0470970:CDS 55.0%
CAAACCGCCTGAACAGCTGA+AGG - chr3_3:73172008-73172027 None:intergenic 55.0%
CTGCTCTCCACACATGCTCA+GGG + chr3_3:73172039-73172058 Msa0470970:CDS 55.0%
AATGCCTCCCTGAGCATGTG+TGG - chr3_3:73172049-73172068 None:intergenic 55.0%
GGCACTTCCTCGAAGTCATG+TGG - chr3_3:73172177-73172196 None:intergenic 55.0%
! GAAGTGCCCTTTGAAGGGCT+CGG + chr3_3:73172189-73172208 Msa0470970:three_prime_UTR 55.0%
CACTTCTCCGAGCCCTTCAA+AGG - chr3_3:73172199-73172218 None:intergenic 55.0%
TACACCAAGGGAAAGGGGAG+GGG - chr3_3:73172240-73172259 None:intergenic 55.0%
CTACACCAAGGGAAAGGGGA+GGG - chr3_3:73172241-73172260 None:intergenic 55.0%
TCTACACCAAGGGAAAGGGG+AGG - chr3_3:73172242-73172261 None:intergenic 55.0%
! TTTGTCTCCCATGACGGGGT+TGG + chr3_3:73172487-73172506 Msa0470970:intron 55.0%
CAAACGGATGCCCTCACCTG+AGG + chr3_3:73171826-73171845 Msa0470970:CDS 60.0%
GTCCAAGGGACCTCAGGTGA+GGG - chr3_3:73171839-73171858 None:intergenic 60.0%
AGTCCAAGGGACCTCAGGTG+AGG - chr3_3:73171840-73171859 None:intergenic 60.0%
CCTGAGCATGTGTGGAGAGC+AGG - chr3_3:73172041-73172060 None:intergenic 60.0%
CCTGCTCTCCACACATGCTC+AGG + chr3_3:73172038-73172057 Msa0470970:CDS 60.0%
CTCTCCACACATGCTCAGGG+AGG + chr3_3:73172042-73172061 Msa0470970:CDS 60.0%
TGCCCTCACCTGAGGTCCCT+TGG + chr3_3:73171834-73171853 Msa0470970:CDS 65.0%
CAAGGGAAAGGGGAGGGGAG+GGG - chr3_3:73172235-73172254 None:intergenic 65.0%
CCAAGGGAAAGGGGAGGGGA+GGG - chr3_3:73172236-73172255 None:intergenic 65.0%
ACCAAGGGAAAGGGGAGGGG+AGG - chr3_3:73172237-73172256 None:intergenic 65.0%
CCCTCCCCTCCCCTTTCCCT+TGG + chr3_3:73172233-73172252 Msa0470970:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 73169113 73172564 73169113 ID=Msa0470970;Name=Msa0470970
chr3_3 mRNA 73169113 73172564 73169113 ID=Msa0470970-mRNA-1;Parent=Msa0470970;Name=Msa0470970-mRNA-1;_AED=0.04;_eAED=0.04;_QI=132|1|1|1|0.6|0.33|6|349|368
chr3_3 exon 73169113 73169206 73169113 ID=Msa0470970-mRNA-1:exon:18463;Parent=Msa0470970-mRNA-1
chr3_3 exon 73169805 73170093 73169805 ID=Msa0470970-mRNA-1:exon:18464;Parent=Msa0470970-mRNA-1
chr3_3 exon 73171056 73171404 73171056 ID=Msa0470970-mRNA-1:exon:18465;Parent=Msa0470970-mRNA-1
chr3_3 exon 73171503 73171644 73171503 ID=Msa0470970-mRNA-1:exon:18466;Parent=Msa0470970-mRNA-1
chr3_3 exon 73171805 73172472 73171805 ID=Msa0470970-mRNA-1:exon:18467;Parent=Msa0470970-mRNA-1
chr3_3 exon 73172519 73172564 73172519 ID=Msa0470970-mRNA-1:exon:18468;Parent=Msa0470970-mRNA-1
chr3_3 five_prime_UTR 73169113 73169206 73169113 ID=Msa0470970-mRNA-1:five_prime_utr;Parent=Msa0470970-mRNA-1
chr3_3 five_prime_UTR 73169805 73169842 73169805 ID=Msa0470970-mRNA-1:five_prime_utr;Parent=Msa0470970-mRNA-1
chr3_3 CDS 73169843 73170093 73169843 ID=Msa0470970-mRNA-1:cds;Parent=Msa0470970-mRNA-1
chr3_3 CDS 73171056 73171404 73171056 ID=Msa0470970-mRNA-1:cds;Parent=Msa0470970-mRNA-1
chr3_3 CDS 73171503 73171644 73171503 ID=Msa0470970-mRNA-1:cds;Parent=Msa0470970-mRNA-1
chr3_3 CDS 73171805 73172169 73171805 ID=Msa0470970-mRNA-1:cds;Parent=Msa0470970-mRNA-1
chr3_3 three_prime_UTR 73172170 73172472 73172170 ID=Msa0470970-mRNA-1:three_prime_utr;Parent=Msa0470970-mRNA-1
chr3_3 three_prime_UTR 73172519 73172564 73172519 ID=Msa0470970-mRNA-1:three_prime_utr;Parent=Msa0470970-mRNA-1
Gene Sequence

>Msa0470970

ATGGTTGGGAAGGATAATTTAAAGACTGAGGATTTGAATTTGTTTTTTGAGAATCTTATGATGGTTGCTGGTGGTGAGAAAGGAGGGAACATGAAGGTTGGTGTGATCACTGAATGGAAGGATATTCCTGTTGAGCTTTTGATGCAGATTCTGTCTCTTGTGGATGATCAGACGGTGATTCGAGCTTCTGGTGTTTGTCGTGGTTGGAGAGATTCTATTTACTTTGGCCTTGCTCGTTTATCACTTTCATGGTGTAACAAGAACATGAACAACTTGGTCCTATCTCTTGTTCCCAAGTTTGCAAAACTGCAAACTCTAATCCTTCGTCAAGATAAGCCACAACTGGACGACAATGTTGTTGGCACTATTGCAAATTTCTGTCATGACCTGCAGATTCTTGACCTCAGCAAAAGTTTCAAGCTCACTGATTGTTCACTGTATGCTATTGCTCATGGTTGCCGTGATCTGACAAAACTAAACATCAGTGGATGTTCAGCATTTAGTGACAATGCTCTGGCCTACCTTGCTGGTTTCTGTAGAAAACTGAAAGTTCTAAATCTATGTGGATGTGTTAGAGCAGCTTCTGATACTGCACTTCAGGCTATTGGACACTACTGCAATCAGTTGCAGTCTTTGAACCTTGGATGGTGTGACAAAGTTGGTGATGTTGGAGTGATGAGTCTAGCATATGGTTGTCCTGATCTAAGAACAGTTGATTTGTGTGGCTGTGTCTATATAACAGATGATAGTGTGATTGCTTTGGCAAACGGATGCCCTCACCTGAGGTCCCTTGGACTGTACTTCTGCAAGAACATAACAGACAATGCCATGTATTCATTGGCACAAAGCAAAGTGAAGAACAGGATGTGGGGATCTGTGAAAGGAGGAAATGATGAAGATGGACTAAGGACATTGAACATCAGCCAGTGCACTTCACTCACTCCTTCAGCTGTTCAGGCGGTTTGTGACTCATCTCCTGCTCTCCACACATGCTCAGGGAGGCATTCACTCATCATGAGTGGCTGTCTCAATTTGACCGAAGTCCATTGTGCTTGTGCTGGTCATGCACACCGTGCAATGAACGCTTTCCCTCATCCTGCTCATTAA
Protein sequence

>Msa0470970

MVGKDNLKTEDLNLFFENLMMVAGGEKGGNMKVGVITEWKDIPVELLMQILSLVDDQTVIRASGVCRGWRDSIYFGLARLSLSWCNKNMNNLVLSLVPKFAKLQTLILRQDKPQLDDNVVGTIANFCHDLQILDLSKSFKLTDCSLYAIAHGCRDLTKLNISGCSAFSDNALAYLAGFCRKLKVLNLCGCVRAASDTALQAIGHYCNQLQSLNLGWCDKVGDVGVMSLAYGCPDLRTVDLCGCVYITDDSVIALANGCPHLRSLGLYFCKNITDNAMYSLAQSKVKNRMWGSVKGGNDEDGLRTLNISQCTSLTPSAVQAVCDSSPALHTCSGRHSLIMSGCLNLTEVHCACAGHAHRAMNAFPHPAH*