AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0982440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0982440 MtrunA17_Chr3g0125671 99.457 368 2 0 1 368 1 368 0.0 750
Msa0982440 MtrunA17_Chr1g0159531 82.335 334 56 1 35 368 23 353 0.0 567
Msa0982440 MtrunA17_Chr1g0212071 28.000 325 200 8 47 363 25 323 2.42e-22 97.4
Msa0982440 MtrunA17_Chr1g0212071 30.415 217 133 5 114 328 146 346 4.79e-22 96.7
Msa0982440 MtrunA17_Chr4g0004901 33.735 166 107 2 117 282 395 557 1.04e-21 97.1
Msa0982440 MtrunA17_Chr4g0004901 32.500 160 104 4 123 282 453 608 2.52e-14 74.3
Msa0982440 MtrunA17_Chr4g0004901 32.624 141 92 3 115 255 495 632 4.45e-11 64.3
Msa0982440 MtrunA17_Chr2g0286991 29.767 215 134 2 114 328 306 503 1.10e-19 90.5
Msa0982440 MtrunA17_Chr2g0286991 32.127 221 110 6 138 321 124 341 3.59e-18 85.9
Msa0982440 MtrunA17_Chr2g0286991 28.431 204 129 3 123 326 393 579 9.07e-15 75.9
Msa0982440 MtrunA17_Chr2g0286991 26.582 237 139 6 113 349 229 430 3.38e-13 70.9
Msa0982440 MtrunA17_Chr2g0286991 31.159 138 80 2 195 332 128 250 6.08e-12 67.0
Msa0982440 MtrunA17_Chr2g0286991 23.944 213 135 3 77 264 374 584 2.80e-11 65.1
Msa0982440 MtrunA17_Chr1g0176031 34.320 169 107 4 115 282 174 339 1.27e-17 83.2
Msa0982440 MtrunA17_Chr1g0176031 29.231 195 111 4 114 283 121 313 5.09e-16 78.6
Msa0982440 MtrunA17_Chr1g0176031 27.103 214 134 4 133 329 84 292 4.05e-12 66.6
Msa0982440 MtrunA17_Chr4g0063841 31.183 186 102 2 123 282 201 386 1.42e-17 84.3
Msa0982440 MtrunA17_Chr7g0272131 34.437 151 97 2 127 277 387 535 2.80e-17 83.6
Msa0982440 MtrunA17_Chr7g0272131 34.731 167 106 3 117 283 403 566 1.02e-13 72.4
Msa0982440 MtrunA17_Chr7g0272131 27.888 251 143 8 115 361 273 489 2.47e-12 68.2
Msa0982440 MtrunA17_Chr1g0149351 26.721 247 124 4 123 313 210 455 1.57e-16 81.3
Msa0982440 MtrunA17_Chr1g0149351 26.442 208 139 2 123 330 184 377 2.71e-13 71.2
Msa0982440 MtrunA17_Chr1g0149351 28.324 173 119 5 113 282 464 634 4.31e-11 64.3
Msa0982440 MtrunA17_Chr1g0149351 32.967 91 61 0 192 282 174 264 7.97e-11 63.5
Msa0982440 MtrunA17_Chr3g0137771 25.926 216 107 3 111 273 196 411 2.56e-15 77.4
Msa0982440 MtrunA17_Chr3g0137771 31.868 91 62 0 192 282 172 262 5.33e-11 63.9
Msa0982440 MtrunA17_Chr4g0070541 31.892 185 121 4 92 274 468 649 8.15e-15 75.9
Msa0982440 MtrunA17_Chr4g0073771 23.077 286 181 7 31 278 1 285 1.50e-14 73.6
Msa0982440 MtrunA17_Chr1g0152951 32.086 187 120 5 77 261 257 438 2.84e-13 70.9
Msa0982440 MtrunA17_Chr4g0070521 29.952 207 130 5 92 286 99 302 5.39e-13 69.3
Msa0982440 MtrunA17_Chr8g0347711 24.000 300 158 7 96 348 83 359 5.63e-13 69.7
Msa0982440 MtrunA17_Chr4g0017381 30.000 150 100 2 115 264 155 299 1.12e-12 68.2
Msa0982440 MtrunA17_Chr4g0008501 27.547 265 168 8 76 324 302 558 1.77e-11 65.5
Msa0982440 MtrunA17_Chr8g0352431 29.907 214 125 6 64 264 366 567 3.35e-11 64.7
Msa0982440 MtrunA17_Chr2g0300611 28.750 160 111 2 128 286 509 666 4.57e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0982440 AT1G21410.2 73.889 360 82 3 21 368 1 360 0.0 533
Msa0982440 AT1G21410.1 73.889 360 82 3 21 368 1 360 0.0 533
Msa0982440 AT1G77000.2 70.718 362 93 3 10 368 9 360 0.0 522
Msa0982440 AT1G77000.1 70.718 362 93 3 10 368 9 360 0.0 522
Msa0982440 AT1G77000.3 68.908 238 64 1 10 247 9 236 8.52e-115 334
Msa0982440 AT1G77000.3 27.273 220 135 4 121 330 22 226 2.53e-12 66.6
Msa0982440 AT1G77000.4 68.908 238 64 1 10 247 9 236 8.52e-115 334
Msa0982440 AT1G77000.4 27.273 220 135 4 121 330 22 226 2.53e-12 66.6
Msa0982440 AT5G23340.1 30.469 256 155 6 114 354 136 383 1.76e-26 109
Msa0982440 AT5G23340.1 30.729 192 114 3 168 347 86 270 1.34e-18 87.0
Msa0982440 AT4G15475.1 29.870 231 141 5 98 328 372 581 8.96e-22 97.4
Msa0982440 AT4G15475.1 28.372 215 137 3 114 328 306 503 1.60e-20 93.6
Msa0982440 AT4G15475.1 27.670 206 146 3 77 282 193 395 3.45e-16 80.5
Msa0982440 AT4G15475.1 28.455 246 130 7 137 345 123 359 7.68e-15 76.3
Msa0982440 AT4G15475.1 24.766 214 132 4 77 264 374 584 2.15e-12 68.9
Msa0982440 AT3G58530.1 28.085 235 153 6 114 336 123 353 3.76e-19 88.2
Msa0982440 AT3G58530.1 25.962 208 134 4 141 332 94 297 1.75e-14 74.3
Msa0982440 AT5G01720.1 28.696 230 137 3 77 282 280 506 1.92e-18 87.4
Msa0982440 AT5G01720.1 26.848 257 136 7 113 342 83 314 3.87e-11 65.1
Msa0982440 AT5G27920.1 30.435 161 110 2 122 282 345 503 1.35e-15 78.6
Msa0982440 AT1G47056.1 33.537 164 103 4 111 272 267 426 2.76e-14 74.3
Msa0982440 AT5G25350.1 28.283 198 115 2 113 283 178 375 2.03e-13 72.0
Msa0982440 AT5G25350.1 28.384 229 142 6 130 341 143 366 4.94e-13 70.9
Msa0982440 AT2G25490.1 26.768 198 118 3 115 285 190 387 4.92e-13 70.9
Msa0982440 AT2G25490.1 33.766 154 93 4 135 280 124 276 3.77e-12 68.2
Msa0982440 AT2G25490.1 30.247 162 90 4 195 355 165 304 6.69e-12 67.4
Msa0982440 AT4G07400.1 31.515 165 108 3 122 284 310 471 2.59e-12 68.6
Msa0982440 AT2G06040.1 27.184 206 145 4 71 274 532 734 1.75e-11 66.2
Msa0982440 AT5G67140.1 25.862 232 113 9 42 267 10 188 1.77e-11 63.9
Msa0982440 AT5G57900.1 28.387 155 91 3 117 253 101 253 2.56e-11 64.3

Find 118 sgRNAs with CRISPR-Local

Find 217 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATTAAAGGCAAAGAATT+TGG 0.188931 6_4:+22103912 Msa0982440:five_prime_UTR
GTTTAGCTGTATAAATTTAT+TGG 0.193446 6_4:+22107122 Msa0982440:three_prime_UTR
AAATTCTTTGCCTTTAATTT+AGG 0.201568 6_4:-22103910 None:intergenic
TTACAAAGAACCTAAATTAA+AGG 0.229250 6_4:+22103900 Msa0982440:five_prime_UTR
TCTAAACGTTGTTTGGCTTT+TGG 0.250293 6_4:+22107166 Msa0982440:three_prime_UTR
TTTAATTAATACCTCAACTA+TGG 0.275345 6_4:+22107058 Msa0982440:three_prime_UTR
GACTTCTTCTAAACGTTGTT+TGG 0.301228 6_4:+22107159 Msa0982440:three_prime_UTR
AATGCTCTGGCCTACCTTGC+TGG 0.303145 6_4:+22106036 Msa0982440:CDS
CAGACGGTGATTCGAGCTTC+TGG 0.354879 6_4:+22104747 Msa0982440:CDS
ATTTGGCTTTATCTTCTAAA+CGG 0.360436 6_4:+22103929 Msa0982440:five_prime_UTR
ACCAGGGGAAAGGGGAGGGG+AGG 0.360825 6_4:-22106958 None:intergenic
TTGCTCGTTTATCACTTTCA+TGG 0.361295 6_4:+22104808 Msa0982440:CDS
ATCTGCATCAAAAGCTCAAC+AGG 0.369088 6_4:-22104705 None:intergenic
GAGAATCTTATGATGGTTGC+TGG 0.376471 6_4:+22104627 Msa0982440:CDS
CCCTCCCCTCCCCTTTCCCC+TGG 0.378832 6_4:+22106957 Msa0982440:three_prime_UTR
CAGGGGAAAGGGGAGGGGAG+GGG 0.385932 6_4:-22106956 None:intergenic
CCTGCTCTCCACACATGCTC+AGG 0.394593 6_4:+22106762 Msa0982440:CDS
CTGAATGAATAACAGGCTAT+TGG 0.394963 6_4:+22106212 Msa0982440:intron
CAGTTGCAGTCTTTGAACCT+TGG 0.398849 6_4:+22106248 Msa0982440:CDS
ATAAATTTATACAGCTAAAC+AGG 0.399414 6_4:-22107119 None:intergenic
AGCTTCTGATACTGCACTTC+AGG 0.401548 6_4:+22106107 Msa0982440:CDS
ACTCACTCCTTCAGCTGTTC+AGG 0.403041 6_4:+22106722 Msa0982440:CDS
TGCCCTCACCTGAGGTCCCT+TGG 0.403174 6_4:+22106558 Msa0982440:CDS
CATATCTACACCAGGGGAAA+GGG 0.408362 6_4:-22106967 None:intergenic
TTCGAGGAAGTGCCCTTTGA+AGG 0.410954 6_4:+22106907 Msa0982440:three_prime_UTR
TGGAGAGATTCTATTTACTT+TGG 0.417618 6_4:+22104783 Msa0982440:CDS
CACAAAGCAAAGTGAAGAAC+AGG 0.424932 6_4:+22106628 Msa0982440:CDS
TACACCAGGGGAAAGGGGAG+GGG 0.428438 6_4:-22106961 None:intergenic
TGTGGCTGTGTCTATATAAC+AGG 0.428750 6_4:+22106347 Msa0982440:CDS
CTTCTGGTGTTTGTCGTGGT+TGG 0.432543 6_4:+22104763 Msa0982440:CDS
CCAGGGGAAAGGGGAGGGGA+GGG 0.437972 6_4:-22106957 None:intergenic
TTTGGCTTTATCTTCTAAAC+GGG 0.438350 6_4:+22103930 Msa0982440:five_prime_UTR
CAAACTTGGGAACAAGAGAT+AGG 0.439501 6_4:-22105807 None:intergenic
CAACTGGACGACAATGTTGT+TGG 0.451784 6_4:+22105868 Msa0982440:CDS
CCTGAGCATGTGTGGAGAGC+AGG 0.456485 6_4:-22106762 None:intergenic
AGACAATGCCATGTATTCAT+TGG 0.463323 6_4:+22106605 Msa0982440:CDS
TGCTGAGGTCAAGAATCTGC+AGG 0.470249 6_4:-22105915 None:intergenic
TCGTCAAGATAAGCCACAAC+TGG 0.470692 6_4:+22105852 Msa0982440:CDS
TTGGTGAAGGGAAACTGAAA+TGG 0.472951 6_4:+22104560 Msa0982440:exon
AGCATTTAGTGACAATGCTC+TGG 0.474697 6_4:+22106023 Msa0982440:CDS
TCACTGTATGCTATTGCTCA+TGG 0.475331 6_4:+22105961 Msa0982440:CDS
CACTTCTCCGAGCCCTTCAA+AGG 0.480132 6_4:-22106920 None:intergenic
CATGTGGTTTATTAATGAGC+AGG 0.481617 6_4:-22106882 None:intergenic
GATGCAGATTCTGTCTCTTG+TGG 0.484308 6_4:+22104719 Msa0982440:CDS
TGTGACAAAGTTGGTGATGT+TGG 0.489189 6_4:+22106275 Msa0982440:CDS
AAATCAACTGTTCTTAGATC+AGG 0.489805 6_4:-22106323 None:intergenic
TGCAGTCTTTGAACCTTGGA+TGG 0.491087 6_4:+22106252 Msa0982440:CDS
CTACACCAGGGGAAAGGGGA+GGG 0.495498 6_4:-22106962 None:intergenic
AGTACAGTCCAAGGGACCTC+AGG 0.495892 6_4:-22106566 None:intergenic
TCTACACCAGGGGAAAGGGG+AGG 0.496300 6_4:-22106963 None:intergenic
ATATGTTTGTGACTTTATGT+TGG 0.498136 6_4:+22106985 Msa0982440:three_prime_UTR
AGATGATAGTGTGATTGCTT+TGG 0.499364 6_4:+22106527 Msa0982440:intron
GTTTATTAATGAGCAGGATG+AGG 0.501557 6_4:-22106876 None:intergenic
TAATAAACCACATGACTTCG+AGG 0.510111 6_4:+22106891 Msa0982440:exon
ATGGTTGCTGGTGGTGAGAA+AGG 0.513155 6_4:+22104639 Msa0982440:CDS
AGTATGAGCACAACAACAAA+TGG 0.514689 6_4:-22107031 None:intergenic
ACATATCTACACCAGGGGAA+AGG 0.516394 6_4:-22106968 None:intergenic
AGTGTGATTGCTTTGGCAAA+CGG 0.522528 6_4:+22106534 Msa0982440:CDS
GCAAAGTGAAGAACAGGATG+TGG 0.523649 6_4:+22106634 Msa0982440:CDS
GAAATGATGAAGATGGACTA+AGG 0.526857 6_4:+22106673 Msa0982440:CDS
CACTCCTTCAGCTGTTCAGG+CGG 0.526906 6_4:+22106725 Msa0982440:CDS
GAAGGGAAACTGAAATGGTT+GGG 0.529142 6_4:+22104565 Msa0982440:exon
CAACTTTGTCACACCATCCA+AGG 0.529983 6_4:-22106265 None:intergenic
CTGCTCTCCACACATGCTCA+GGG 0.533137 6_4:+22106763 Msa0982440:CDS
AAAGGAGGGAACATGAAGGT+TGG 0.533533 6_4:+22104657 Msa0982440:CDS
TCGAGGAAGTGCCCTTTGAA+GGG 0.540167 6_4:+22106908 Msa0982440:three_prime_UTR
ATATCTACACCAGGGGAAAG+GGG 0.541110 6_4:-22106966 None:intergenic
GTCCAAGGGACCTCAGGTGA+GGG 0.542888 6_4:-22106560 None:intergenic
GTCTCTTGTGGATGATCAGA+CGG 0.544667 6_4:+22104731 Msa0982440:CDS
TTTATTGGAAGACATGGACT+TGG 0.545315 6_4:+22107137 Msa0982440:three_prime_UTR
GAAGTCCATTGTGCTTGTGC+TGG 0.549870 6_4:+22106825 Msa0982440:CDS
GCTTTGTGCCAATGAATACA+TGG 0.550039 6_4:-22106613 None:intergenic
CGAGCTTCTGGTGTTTGTCG+TGG 0.551970 6_4:+22104759 Msa0982440:CDS
ACAACATTGTCGTCCAGTTG+TGG 0.553257 6_4:-22105865 None:intergenic
TATAAATTTATTGGAAGACA+TGG 0.554470 6_4:+22107131 Msa0982440:three_prime_UTR
CTGAAAGTTCTAAATCTATG+TGG 0.556057 6_4:+22106072 Msa0982440:CDS
TTTATTAATGAGCAGGATGA+GGG 0.556509 6_4:-22106875 None:intergenic
ACTTCTCCGAGCCCTTCAAA+GGG 0.556622 6_4:-22106919 None:intergenic
TCTACAGAAACCAGCAAGGT+AGG 0.559137 6_4:-22106046 None:intergenic
TGAAGGGAAACTGAAATGGT+TGG 0.561758 6_4:+22104564 Msa0982440:exon
GTTGCTGGTGGTGAGAAAGG+AGG 0.562599 6_4:+22104642 Msa0982440:CDS
AAAGGAGGAAATGATGAAGA+TGG 0.563283 6_4:+22106666 Msa0982440:CDS
CAAAGTGAAGAACAGGATGT+GGG 0.569923 6_4:+22106635 Msa0982440:CDS
GAAGGATAATTTAAAGACTG+AGG 0.570173 6_4:+22104587 Msa0982440:CDS
AAGGAGTGAGTGAAGTGCAC+TGG 0.570780 6_4:-22106710 None:intergenic
GGAAACTGAAATGGTTGGGA+AGG 0.572501 6_4:+22104569 Msa0982440:exon
GAGGGAAAGCGTTCATTGCA+CGG 0.578968 6_4:-22106857 None:intergenic
GGCACTTCCTCGAAGTCATG+TGG 0.591410 6_4:-22106898 None:intergenic
GTCACAAACATATCTACACC+AGG 0.593560 6_4:-22106975 None:intergenic
AGGATGTGGGGATCTGTGAA+AGG 0.597813 6_4:+22106648 Msa0982440:CDS
ATCTTAAAAGTCCATAGTTG+AGG 0.598502 6_4:-22107069 None:intergenic
TCTTGCAGAAGTACAGTCCA+AGG 0.602542 6_4:-22106575 None:intergenic
TTGCTGGTGGTGAGAAAGGA+GGG 0.605825 6_4:+22104643 Msa0982440:CDS
AGCACAAGCACAATGGACTT+CGG 0.606895 6_4:-22106823 None:intergenic
GGAGTGATGAGTCTAGCATA+TGG 0.608969 6_4:+22106296 Msa0982440:CDS
GAAGTGCCCTTTGAAGGGCT+CGG 0.610683 6_4:+22106913 Msa0982440:three_prime_UTR
AGTCCAAGGGACCTCAGGTG+AGG 0.614611 6_4:-22106561 None:intergenic
CAAACGGATGCCCTCACCTG+AGG 0.618431 6_4:+22106550 Msa0982440:CDS
AATGCCTCCCTGAGCATGTG+TGG 0.621155 6_4:-22106770 None:intergenic
TGAGAAAGGAGGGAACATGA+AGG 0.625459 6_4:+22104653 Msa0982440:CDS
CTGACAAAACTAAACATCAG+TGG 0.630947 6_4:+22105994 Msa0982440:CDS
GTTGTGGCTTATCTTGACGA+AGG 0.635647 6_4:-22105849 None:intergenic
TGGTGTGATCACTGAATGGA+AGG 0.636114 6_4:+22104677 Msa0982440:CDS
AGGTTGGTGTGATCACTGAA+TGG 0.638216 6_4:+22104673 Msa0982440:CDS
TAACAAGAACATGAACAACT+TGG 0.639202 6_4:+22105783 Msa0982440:CDS
CAAACCGCCTGAACAGCTGA+AGG 0.645204 6_4:-22106729 None:intergenic
CTAAGAACAGTTGATTTGTG+TGG 0.647210 6_4:+22106329 Msa0982440:CDS
CACAAACATATCTACACCAG+GGG 0.651313 6_4:-22106973 None:intergenic
AGGCATTCACTCATCATGAG+TGG 0.653984 6_4:+22106786 Msa0982440:CDS
CATGACCAGCACAAGCACAA+TGG 0.654961 6_4:-22106830 None:intergenic
CTTGGATGGTGTGACAAAGT+TGG 0.660586 6_4:+22106266 Msa0982440:CDS
ATGTGGGGATCTGTGAAAGG+AGG 0.661005 6_4:+22106651 Msa0982440:CDS
ATGAAAGTGATAAACGAGCA+AGG 0.662700 6_4:-22104806 None:intergenic
CTCTCCACACATGCTCAGGG+AGG 0.670816 6_4:+22106766 Msa0982440:CDS
TCACAAACATATCTACACCA+GGG 0.674070 6_4:-22106974 None:intergenic
AAAGTGAAGAACAGGATGTG+GGG 0.676311 6_4:+22106636 Msa0982440:CDS
CTTGCAGAAGTACAGTCCAA+GGG 0.678760 6_4:-22106574 None:intergenic
AATCTTATGATGGTTGCTGG+TGG 0.732364 6_4:+22104630 Msa0982440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTAATTGATTAAAGTTT+TGG + chr6_4:22104472-22104491 Msa0982440:intron 10.0%
!!! TTTTTTGTTTAAATTGATTT+TGG + chr6_4:22104930-22104949 Msa0982440:intron 10.0%
!!! GTTCTTTGTAATAATTTTTA+GGG - chr6_4:22103891-22103910 None:intergenic 15.0%
!! AAAACAAAAAATGATAGTTA+AGG - chr6_4:22103968-22103987 None:intergenic 15.0%
!!! AAAACTTTATCATTTTTTTC+TGG - chr6_4:22104045-22104064 None:intergenic 15.0%
!! ACAAAATCAAAATATTAAGA+GGG - chr6_4:22104112-22104131 None:intergenic 15.0%
!!! ATATTATTCATCAATTCTTT+TGG + chr6_4:22104987-22105006 Msa0982440:intron 15.0%
!!! GGTTCTTTGTAATAATTTTT+AGG - chr6_4:22103892-22103911 None:intergenic 20.0%
!! TTACAAAGAACCTAAATTAA+AGG + chr6_4:22103900-22103919 Msa0982440:five_prime_UTR 20.0%
!!! AAATTCTTTGCCTTTAATTT+AGG - chr6_4:22103913-22103932 None:intergenic 20.0%
!! TAAATTAAAGGCAAAGAATT+TGG + chr6_4:22103912-22103931 Msa0982440:five_prime_UTR 20.0%
!!! TTTTTTGTTTTACTCTTTCA+CGG + chr6_4:22103977-22103996 Msa0982440:intron 20.0%
!! CACAAAATCAAAATATTAAG+AGG - chr6_4:22104113-22104132 None:intergenic 20.0%
!!! ATAAAGGGTCTATTTTTTTA+AGG - chr6_4:22104338-22104357 None:intergenic 20.0%
!! GGGATAATTACAATTATAAT+TGG - chr6_4:22104390-22104409 None:intergenic 20.0%
!!! TGAAACTATTTTTCTCAAAT+TGG + chr6_4:22104880-22104899 Msa0982440:intron 20.0%
!!! GAAACTATTTTTCTCAAATT+GGG + chr6_4:22104881-22104900 Msa0982440:intron 20.0%
!!! AAACTATTTTTCTCAAATTG+GGG + chr6_4:22104882-22104901 Msa0982440:intron 20.0%
!! GATGAATAATATTGAAAACA+TGG - chr6_4:22104979-22104998 None:intergenic 20.0%
!!! ATTTTGATGTTTTCAAAATG+TGG + chr6_4:22105123-22105142 Msa0982440:intron 20.0%
!! ATTAAACTGTATATTCAAAC+AGG + chr6_4:22105337-22105356 Msa0982440:intron 20.0%
!! TTAAACTGTATATTCAAACA+GGG + chr6_4:22105338-22105357 Msa0982440:intron 20.0%
!! TAAGAAATTGAATTCAACAT+TGG - chr6_4:22105623-22105642 None:intergenic 20.0%
!! TGTTCATAAAACTATAAAAG+TGG + chr6_4:22105686-22105705 Msa0982440:intron 20.0%
!! CAATCATATTAAAACTAAGA+TGG + chr6_4:22106160-22106179 Msa0982440:intron 20.0%
!! ATTGTTATATGTTTATAACG+AGG + chr6_4:22106484-22106503 Msa0982440:intron 20.0%
!! TTGTTATATGTTTATAACGA+GGG + chr6_4:22106485-22106504 Msa0982440:intron 20.0%
!! TTTAATTAATACCTCAACTA+TGG + chr6_4:22107058-22107077 Msa0982440:three_prime_UTR 20.0%
!! ATAAATTTATACAGCTAAAC+AGG - chr6_4:22107122-22107141 None:intergenic 20.0%
!! GTTTAGCTGTATAAATTTAT+TGG + chr6_4:22107122-22107141 Msa0982440:three_prime_UTR 20.0%
!! TATAAATTTATTGGAAGACA+TGG + chr6_4:22107131-22107150 Msa0982440:three_prime_UTR 20.0%
!!! GTAATAATTTTTAGGGTGTT+TGG - chr6_4:22103884-22103903 None:intergenic 25.0%
!!! ATTTGGCTTTATCTTCTAAA+CGG + chr6_4:22103929-22103948 Msa0982440:five_prime_UTR 25.0%
! AAAAATGATAGTTAAGGAAG+TGG - chr6_4:22103962-22103981 None:intergenic 25.0%
! AATCATCAAGAAATGAAAGT+GGG - chr6_4:22104081-22104100 None:intergenic 25.0%
! AAATCATCAAGAAATGAAAG+TGG - chr6_4:22104082-22104101 None:intergenic 25.0%
!!! GCACTTTTTTTAATCAAACT+AGG - chr6_4:22104160-22104179 None:intergenic 25.0%
! TGTAATTGAGAAATTTGTGA+TGG + chr6_4:22104288-22104307 Msa0982440:intron 25.0%
! GTAATTGAGAAATTTGTGAT+GGG + chr6_4:22104289-22104308 Msa0982440:intron 25.0%
!!! AAAGTTTTGGAATTTTGCTA+TGG + chr6_4:22104485-22104504 Msa0982440:intron 25.0%
!!! GTTTTTTGAGAATCTTATGA+TGG + chr6_4:22104620-22104639 Msa0982440:CDS 25.0%
!!! ATGAATTGCTTACTTTTGAA+GGG + chr6_4:22105053-22105072 Msa0982440:intron 25.0%
!!! ATATGTGAGTTTTATTGACA+TGG - chr6_4:22105105-22105124 None:intergenic 25.0%
! TAAAGTAAACAAAAGCTACA+GGG - chr6_4:22105443-22105462 None:intergenic 25.0%
!! ATTATGTAATTCCTCTTTTC+AGG + chr6_4:22105758-22105777 Msa0982440:intron 25.0%
! ATATGTTTGTGACTTTATGT+TGG + chr6_4:22106985-22107004 Msa0982440:three_prime_UTR 25.0%
!! TTTGGCTTTATCTTCTAAAC+GGG + chr6_4:22103930-22103949 Msa0982440:five_prime_UTR 30.0%
!!! AGTTTTAAACACAGAACAAG+TGG - chr6_4:22104236-22104255 None:intergenic 30.0%
!! CATCAGAATTCTTTGATTTG+TGG + chr6_4:22104439-22104458 Msa0982440:intron 30.0%
!!! CTAGGAAAGTTGATGATTTT+TGG + chr6_4:22104541-22104560 Msa0982440:five_prime_UTR 30.0%
!!! AAGTTGATGATTTTTGGTGA+AGG + chr6_4:22104547-22104566 Msa0982440:five_prime_UTR 30.0%
!!! AGTTGATGATTTTTGGTGAA+GGG + chr6_4:22104548-22104567 Msa0982440:five_prime_UTR 30.0%
GAAGGATAATTTAAAGACTG+AGG + chr6_4:22104587-22104606 Msa0982440:CDS 30.0%
TGGAGAGATTCTATTTACTT+TGG + chr6_4:22104783-22104802 Msa0982440:CDS 30.0%
!! TCAAATTGGGGTATTTTTCT+TGG + chr6_4:22104894-22104913 Msa0982440:intron 30.0%
!! GATGAATTGCTTACTTTTGA+AGG + chr6_4:22105052-22105071 Msa0982440:intron 30.0%
!! TGAATTGCTTACTTTTGAAG+GGG + chr6_4:22105054-22105073 Msa0982440:intron 30.0%
! TTGATGTTTTCAAAATGTGG+TGG + chr6_4:22105126-22105145 Msa0982440:intron 30.0%
! TTAAGTTGTTCATCCAAACA+GGG + chr6_4:22105301-22105320 Msa0982440:intron 30.0%
GTAAAGTAAACAAAAGCTAC+AGG - chr6_4:22105444-22105463 None:intergenic 30.0%
CCAACTTCAGAAATTATAAG+AGG - chr6_4:22105500-22105519 None:intergenic 30.0%
!! CCTCTTATAATTTCTGAAGT+TGG + chr6_4:22105497-22105516 Msa0982440:intron 30.0%
GTTGACGTTATAATGTTTCT+TGG + chr6_4:22105578-22105597 Msa0982440:intron 30.0%
ATTGAATTCAACATTGGAAC+CGG - chr6_4:22105617-22105636 None:intergenic 30.0%
TAACAAGAACATGAACAACT+TGG + chr6_4:22105783-22105802 Msa0982440:CDS 30.0%
!!! TGTTTAGTTTTGTCAGATCA+CGG - chr6_4:22105990-22106009 None:intergenic 30.0%
!! CTGAAAGTTCTAAATCTATG+TGG + chr6_4:22106072-22106091 Msa0982440:CDS 30.0%
TTCATTCAGTAATGTCTCAT+GGG - chr6_4:22106201-22106220 None:intergenic 30.0%
ATTCATTCAGTAATGTCTCA+TGG - chr6_4:22106202-22106221 None:intergenic 30.0%
GACATTACTGAATGAATAAC+AGG + chr6_4:22106205-22106224 Msa0982440:intron 30.0%
AAATCAACTGTTCTTAGATC+AGG - chr6_4:22106326-22106345 None:intergenic 30.0%
GTTTATAACGAGGGTAATTT+CGG + chr6_4:22106494-22106513 Msa0982440:intron 30.0%
TTTATTAATGAGCAGGATGA+GGG - chr6_4:22106878-22106897 None:intergenic 30.0%
ATCTTAAAAGTCCATAGTTG+AGG - chr6_4:22107072-22107091 None:intergenic 30.0%
AATTTGCAGAAAGCAACATG+GGG - chr6_4:22104410-22104429 None:intergenic 35.0%
CAATTTGCAGAAAGCAACAT+GGG - chr6_4:22104411-22104430 None:intergenic 35.0%
ATGAAAGTGATAAACGAGCA+AGG - chr6_4:22104809-22104828 None:intergenic 35.0%
TTGCTCGTTTATCACTTTCA+TGG + chr6_4:22104808-22104827 Msa0982440:CDS 35.0%
AATATTGAAAACATGGCACC+AGG - chr6_4:22104972-22104991 None:intergenic 35.0%
CAGAAAATGTATAGCTGAGA+AGG + chr6_4:22105166-22105185 Msa0982440:intron 35.0%
! ATAGCTGAGAAGGATTTGTT+TGG + chr6_4:22105176-22105195 Msa0982440:intron 35.0%
! TGAGAAGGATTTGTTTGGAT+TGG + chr6_4:22105181-22105200 Msa0982440:intron 35.0%
! AGGATTTGTTTGGATTGGAT+TGG + chr6_4:22105186-22105205 Msa0982440:intron 35.0%
! CTTAAGTTGTTCATCCAAAC+AGG + chr6_4:22105300-22105319 Msa0982440:intron 35.0%
TTCCACAGCAAAAATACAAC+AGG - chr6_4:22105385-22105404 None:intergenic 35.0%
AGATTTATTCCAGGAATGCA+GGG - chr6_4:22105527-22105546 None:intergenic 35.0%
AAGACTTGCAGATTTATTCC+AGG - chr6_4:22105536-22105555 None:intergenic 35.0%
AAAAGATGGGGGAAAATCAA+CGG - chr6_4:22105650-22105669 None:intergenic 35.0%
TTCTTGTTACACCTGAAAAG+AGG - chr6_4:22105772-22105791 None:intergenic 35.0%
! GTTTGCAGTTTTGCAAACTT+GGG - chr6_4:22105823-22105842 None:intergenic 35.0%
! AGTTTGCAGTTTTGCAAACT+TGG - chr6_4:22105824-22105843 None:intergenic 35.0%
CTGACAAAACTAAACATCAG+TGG + chr6_4:22105994-22106013 Msa0982440:CDS 35.0%
ACTGCACTTCAGGTATTATA+TGG + chr6_4:22106117-22106136 Msa0982440:intron 35.0%
TCATTCAGTAATGTCTCATG+GGG - chr6_4:22106200-22106219 None:intergenic 35.0%
CTGAATGAATAACAGGCTAT+TGG + chr6_4:22106212-22106231 Msa0982440:intron 35.0%
!! CTAAGAACAGTTGATTTGTG+TGG + chr6_4:22106329-22106348 Msa0982440:CDS 35.0%
! AGATGATAGTGTGATTGCTT+TGG + chr6_4:22106527-22106546 Msa0982440:intron 35.0%
AGACAATGCCATGTATTCAT+TGG + chr6_4:22106605-22106624 Msa0982440:CDS 35.0%
AAAGGAGGAAATGATGAAGA+TGG + chr6_4:22106666-22106685 Msa0982440:CDS 35.0%
!! GAAATGATGAAGATGGACTA+AGG + chr6_4:22106673-22106692 Msa0982440:CDS 35.0%
GTTTATTAATGAGCAGGATG+AGG - chr6_4:22106879-22106898 None:intergenic 35.0%
CATGTGGTTTATTAATGAGC+AGG - chr6_4:22106885-22106904 None:intergenic 35.0%
TAATAAACCACATGACTTCG+AGG + chr6_4:22106891-22106910 Msa0982440:exon 35.0%
TCACAAACATATCTACACCA+GGG - chr6_4:22106977-22106996 None:intergenic 35.0%
AGTATGAGCACAACAACAAA+TGG - chr6_4:22107034-22107053 None:intergenic 35.0%
TTTATTGGAAGACATGGACT+TGG + chr6_4:22107137-22107156 Msa0982440:three_prime_UTR 35.0%
GACTTCTTCTAAACGTTGTT+TGG + chr6_4:22107159-22107178 Msa0982440:three_prime_UTR 35.0%
!!! TCTAAACGTTGTTTGGCTTT+TGG + chr6_4:22107166-22107185 Msa0982440:three_prime_UTR 35.0%
GGCATGCACATACACAAAAT+AGG - chr6_4:22104139-22104158 None:intergenic 40.0%
GCAATTTGCAGAAAGCAACA+TGG - chr6_4:22104412-22104431 None:intergenic 40.0%
! CTTATCCTTTTGTGACAGCT+AGG + chr6_4:22104523-22104542 Msa0982440:intron 40.0%
ACTTTCCTAGCTGTCACAAA+AGG - chr6_4:22104531-22104550 None:intergenic 40.0%
TTGGTGAAGGGAAACTGAAA+TGG + chr6_4:22104560-22104579 Msa0982440:exon 40.0%
TGAAGGGAAACTGAAATGGT+TGG + chr6_4:22104564-22104583 Msa0982440:exon 40.0%
GAAGGGAAACTGAAATGGTT+GGG + chr6_4:22104565-22104584 Msa0982440:exon 40.0%
GAGAATCTTATGATGGTTGC+TGG + chr6_4:22104627-22104646 Msa0982440:CDS 40.0%
AATCTTATGATGGTTGCTGG+TGG + chr6_4:22104630-22104649 Msa0982440:CDS 40.0%
ATCTGCATCAAAAGCTCAAC+AGG - chr6_4:22104708-22104727 None:intergenic 40.0%
!! GTCCTGTTGTATTTTTGCTG+TGG + chr6_4:22105380-22105399 Msa0982440:intron 40.0%
GATTTATTCCAGGAATGCAG+GGG - chr6_4:22105526-22105545 None:intergenic 40.0%
CAGATTTATTCCAGGAATGC+AGG - chr6_4:22105528-22105547 None:intergenic 40.0%
TGAGATGAGTGCAAAAGATG+GGG - chr6_4:22105662-22105681 None:intergenic 40.0%
CTGAGATGAGTGCAAAAGAT+GGG - chr6_4:22105663-22105682 None:intergenic 40.0%
!! ATTGTGAAGTGCATTGACTG+TGG + chr6_4:22105725-22105744 Msa0982440:intron 40.0%
CAAACTTGGGAACAAGAGAT+AGG - chr6_4:22105810-22105829 None:intergenic 40.0%
! TGAGCTTGAAACTTTTGCTG+AGG - chr6_4:22105933-22105952 None:intergenic 40.0%
TCACTGTATGCTATTGCTCA+TGG + chr6_4:22105961-22105980 Msa0982440:CDS 40.0%
AGCATTTAGTGACAATGCTC+TGG + chr6_4:22106023-22106042 Msa0982440:CDS 40.0%
! GTTTTCTACAGAAACCAGCA+AGG - chr6_4:22106053-22106072 None:intergenic 40.0%
CATTCAGTAATGTCTCATGG+GGG - chr6_4:22106199-22106218 None:intergenic 40.0%
!! TGTGACAAAGTTGGTGATGT+TGG + chr6_4:22106275-22106294 Msa0982440:CDS 40.0%
TGTGGCTGTGTCTATATAAC+AGG + chr6_4:22106347-22106366 Msa0982440:CDS 40.0%
ATATGTTGTGCTCTGTAGCA+CGG + chr6_4:22106411-22106430 Msa0982440:intron 40.0%
AGTGTGATTGCTTTGGCAAA+CGG + chr6_4:22106534-22106553 Msa0982440:CDS 40.0%
GCTTTGTGCCAATGAATACA+TGG - chr6_4:22106616-22106635 None:intergenic 40.0%
CACAAAGCAAAGTGAAGAAC+AGG + chr6_4:22106628-22106647 Msa0982440:CDS 40.0%
CAAAGTGAAGAACAGGATGT+GGG + chr6_4:22106635-22106654 Msa0982440:CDS 40.0%
AAAGTGAAGAACAGGATGTG+GGG + chr6_4:22106636-22106655 Msa0982440:CDS 40.0%
CACAAACATATCTACACCAG+GGG - chr6_4:22106976-22106995 None:intergenic 40.0%
GTCACAAACATATCTACACC+AGG - chr6_4:22106978-22106997 None:intergenic 40.0%
GGAAACTGAAATGGTTGGGA+AGG + chr6_4:22104569-22104588 Msa0982440:exon 45.0%
TGAGAAAGGAGGGAACATGA+AGG + chr6_4:22104653-22104672 Msa0982440:CDS 45.0%
AAAGGAGGGAACATGAAGGT+TGG + chr6_4:22104657-22104676 Msa0982440:CDS 45.0%
!! AGGTTGGTGTGATCACTGAA+TGG + chr6_4:22104673-22104692 Msa0982440:CDS 45.0%
TGGTGTGATCACTGAATGGA+AGG + chr6_4:22104677-22104696 Msa0982440:CDS 45.0%
GATGCAGATTCTGTCTCTTG+TGG + chr6_4:22104719-22104738 Msa0982440:CDS 45.0%
GTCTCTTGTGGATGATCAGA+CGG + chr6_4:22104731-22104750 Msa0982440:CDS 45.0%
GGTTCTTCAATTCCTGATCC+TGG + chr6_4:22104951-22104970 Msa0982440:intron 45.0%
GCTTATGACTTAGCCCTGTT+TGG - chr6_4:22105317-22105336 None:intergenic 45.0%
TCTTGGAGATCATAGCACAC+CGG + chr6_4:22105595-22105614 Msa0982440:intron 45.0%
GAGATGAGTGCAAAAGATGG+GGG - chr6_4:22105661-22105680 None:intergenic 45.0%
CCTGAGATGAGTGCAAAAGA+TGG - chr6_4:22105664-22105683 None:intergenic 45.0%
! CCATCTTTTGCACTCATCTC+AGG + chr6_4:22105661-22105680 Msa0982440:intron 45.0%
GTTGTGGCTTATCTTGACGA+AGG - chr6_4:22105852-22105871 None:intergenic 45.0%
TCGTCAAGATAAGCCACAAC+TGG + chr6_4:22105852-22105871 Msa0982440:CDS 45.0%
ACAACATTGTCGTCCAGTTG+TGG - chr6_4:22105868-22105887 None:intergenic 45.0%
CAACTGGACGACAATGTTGT+TGG + chr6_4:22105868-22105887 Msa0982440:CDS 45.0%
TCTACAGAAACCAGCAAGGT+AGG - chr6_4:22106049-22106068 None:intergenic 45.0%
AGCTTCTGATACTGCACTTC+AGG + chr6_4:22106107-22106126 Msa0982440:CDS 45.0%
CAGTTGCAGTCTTTGAACCT+TGG + chr6_4:22106248-22106267 Msa0982440:CDS 45.0%
TGCAGTCTTTGAACCTTGGA+TGG + chr6_4:22106252-22106271 Msa0982440:CDS 45.0%
CAACTTTGTCACACCATCCA+AGG - chr6_4:22106268-22106287 None:intergenic 45.0%
CTTGGATGGTGTGACAAAGT+TGG + chr6_4:22106266-22106285 Msa0982440:CDS 45.0%
GGAGTGATGAGTCTAGCATA+TGG + chr6_4:22106296-22106315 Msa0982440:CDS 45.0%
! CTTGCAGAAGTACAGTCCAA+GGG - chr6_4:22106577-22106596 None:intergenic 45.0%
! TCTTGCAGAAGTACAGTCCA+AGG - chr6_4:22106578-22106597 None:intergenic 45.0%
GCAAAGTGAAGAACAGGATG+TGG + chr6_4:22106634-22106653 Msa0982440:CDS 45.0%
AGGCATTCACTCATCATGAG+TGG + chr6_4:22106786-22106805 Msa0982440:CDS 45.0%
! AGCACAAGCACAATGGACTT+CGG - chr6_4:22106826-22106845 None:intergenic 45.0%
ATATCTACACCAGGGGAAAG+GGG - chr6_4:22106969-22106988 None:intergenic 45.0%
CATATCTACACCAGGGGAAA+GGG - chr6_4:22106970-22106989 None:intergenic 45.0%
ACATATCTACACCAGGGGAA+AGG - chr6_4:22106971-22106990 None:intergenic 45.0%
!! AAATAAAAAACAAAAATAAA+GGG - chr6_4:22104353-22104372 None:intergenic 5.0%
!! AAAATAAAAAACAAAAATAA+AGG - chr6_4:22104354-22104373 None:intergenic 5.0%
! ATGGTTGCTGGTGGTGAGAA+AGG + chr6_4:22104639-22104658 Msa0982440:CDS 50.0%
! TTGCTGGTGGTGAGAAAGGA+GGG + chr6_4:22104643-22104662 Msa0982440:CDS 50.0%
CTTCTGGTGTTTGTCGTGGT+TGG + chr6_4:22104763-22104782 Msa0982440:CDS 50.0%
GAAAACATGGCACCAGGATC+AGG - chr6_4:22104966-22104985 None:intergenic 50.0%
TGCTGAGGTCAAGAATCTGC+AGG - chr6_4:22105918-22105937 None:intergenic 50.0%
AGGATGTGGGGATCTGTGAA+AGG + chr6_4:22106648-22106667 Msa0982440:CDS 50.0%
ATGTGGGGATCTGTGAAAGG+AGG + chr6_4:22106651-22106670 Msa0982440:CDS 50.0%
AAGGAGTGAGTGAAGTGCAC+TGG - chr6_4:22106713-22106732 None:intergenic 50.0%
ACTCACTCCTTCAGCTGTTC+AGG + chr6_4:22106722-22106741 Msa0982440:CDS 50.0%
GAAGTCCATTGTGCTTGTGC+TGG + chr6_4:22106825-22106844 Msa0982440:CDS 50.0%
CATGACCAGCACAAGCACAA+TGG - chr6_4:22106833-22106852 None:intergenic 50.0%
!! GAGGGAAAGCGTTCATTGCA+CGG - chr6_4:22106860-22106879 None:intergenic 50.0%
!! TTCGAGGAAGTGCCCTTTGA+AGG + chr6_4:22106907-22106926 Msa0982440:three_prime_UTR 50.0%
!! TCGAGGAAGTGCCCTTTGAA+GGG + chr6_4:22106908-22106927 Msa0982440:three_prime_UTR 50.0%
ACTTCTCCGAGCCCTTCAAA+GGG - chr6_4:22106922-22106941 None:intergenic 50.0%
! GTTGCTGGTGGTGAGAAAGG+AGG + chr6_4:22104642-22104661 Msa0982440:CDS 55.0%
CAGACGGTGATTCGAGCTTC+TGG + chr6_4:22104747-22104766 Msa0982440:CDS 55.0%
CGAGCTTCTGGTGTTTGTCG+TGG + chr6_4:22104759-22104778 Msa0982440:CDS 55.0%
! GTTGGTTTCCCCTGCATTCC+TGG + chr6_4:22105515-22105534 Msa0982440:intron 55.0%
AATGCTCTGGCCTACCTTGC+TGG + chr6_4:22106036-22106055 Msa0982440:CDS 55.0%
TGTGCTCTGTAGCACGGACA+CGG + chr6_4:22106417-22106436 Msa0982440:intron 55.0%
AGTACAGTCCAAGGGACCTC+AGG - chr6_4:22106569-22106588 None:intergenic 55.0%
CACTCCTTCAGCTGTTCAGG+CGG + chr6_4:22106725-22106744 Msa0982440:CDS 55.0%
CAAACCGCCTGAACAGCTGA+AGG - chr6_4:22106732-22106751 None:intergenic 55.0%
CTGCTCTCCACACATGCTCA+GGG + chr6_4:22106763-22106782 Msa0982440:CDS 55.0%
AATGCCTCCCTGAGCATGTG+TGG - chr6_4:22106773-22106792 None:intergenic 55.0%
GGCACTTCCTCGAAGTCATG+TGG - chr6_4:22106901-22106920 None:intergenic 55.0%
! GAAGTGCCCTTTGAAGGGCT+CGG + chr6_4:22106913-22106932 Msa0982440:three_prime_UTR 55.0%
CACTTCTCCGAGCCCTTCAA+AGG - chr6_4:22106923-22106942 None:intergenic 55.0%
CAAACGGATGCCCTCACCTG+AGG + chr6_4:22106550-22106569 Msa0982440:CDS 60.0%
GTCCAAGGGACCTCAGGTGA+GGG - chr6_4:22106563-22106582 None:intergenic 60.0%
AGTCCAAGGGACCTCAGGTG+AGG - chr6_4:22106564-22106583 None:intergenic 60.0%
CCTGAGCATGTGTGGAGAGC+AGG - chr6_4:22106765-22106784 None:intergenic 60.0%
CCTGCTCTCCACACATGCTC+AGG + chr6_4:22106762-22106781 Msa0982440:CDS 60.0%
CTCTCCACACATGCTCAGGG+AGG + chr6_4:22106766-22106785 Msa0982440:CDS 60.0%
TACACCAGGGGAAAGGGGAG+GGG - chr6_4:22106964-22106983 None:intergenic 60.0%
CTACACCAGGGGAAAGGGGA+GGG - chr6_4:22106965-22106984 None:intergenic 60.0%
TCTACACCAGGGGAAAGGGG+AGG - chr6_4:22106966-22106985 None:intergenic 60.0%
TGCCCTCACCTGAGGTCCCT+TGG + chr6_4:22106558-22106577 Msa0982440:CDS 65.0%
CAGGGGAAAGGGGAGGGGAG+GGG - chr6_4:22106959-22106978 None:intergenic 70.0%
CCAGGGGAAAGGGGAGGGGA+GGG - chr6_4:22106960-22106979 None:intergenic 70.0%
ACCAGGGGAAAGGGGAGGGG+AGG - chr6_4:22106961-22106980 None:intergenic 70.0%
CCCTCCCCTCCCCTTTCCCC+TGG + chr6_4:22106957-22106976 Msa0982440:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 22103858 22107197 22103858 ID=Msa0982440;Name=Msa0982440
chr6_4 mRNA 22103858 22107197 22103858 ID=Msa0982440-mRNA-1;Parent=Msa0982440;Name=Msa0982440-mRNA-1;_AED=0.01;_eAED=0.01;_QI=132|1|1|1|1|0.6|5|304|368
chr6_4 exon 22103858 22103951 22103858 ID=Msa0982440-mRNA-1:exon:6948;Parent=Msa0982440-mRNA-1
chr6_4 exon 22104541 22104829 22104541 ID=Msa0982440-mRNA-1:exon:6949;Parent=Msa0982440-mRNA-1
chr6_4 exon 22105780 22106128 22105780 ID=Msa0982440-mRNA-1:exon:6950;Parent=Msa0982440-mRNA-1
chr6_4 exon 22106227 22106368 22106227 ID=Msa0982440-mRNA-1:exon:6951;Parent=Msa0982440-mRNA-1
chr6_4 exon 22106529 22107197 22106529 ID=Msa0982440-mRNA-1:exon:6952;Parent=Msa0982440-mRNA-1
chr6_4 five_prime_UTR 22103858 22103951 22103858 ID=Msa0982440-mRNA-1:five_prime_utr;Parent=Msa0982440-mRNA-1
chr6_4 five_prime_UTR 22104541 22104578 22104541 ID=Msa0982440-mRNA-1:five_prime_utr;Parent=Msa0982440-mRNA-1
chr6_4 CDS 22104579 22104829 22104579 ID=Msa0982440-mRNA-1:cds;Parent=Msa0982440-mRNA-1
chr6_4 CDS 22105780 22106128 22105780 ID=Msa0982440-mRNA-1:cds;Parent=Msa0982440-mRNA-1
chr6_4 CDS 22106227 22106368 22106227 ID=Msa0982440-mRNA-1:cds;Parent=Msa0982440-mRNA-1
chr6_4 CDS 22106529 22106893 22106529 ID=Msa0982440-mRNA-1:cds;Parent=Msa0982440-mRNA-1
chr6_4 three_prime_UTR 22106894 22107197 22106894 ID=Msa0982440-mRNA-1:three_prime_utr;Parent=Msa0982440-mRNA-1
Gene Sequence

>Msa0982440

ATGGTTGGGAAGGATAATTTAAAGACTGAGGATTTGAATTTGTTTTTTGAGAATCTTATGATGGTTGCTGGTGGTGAGAAAGGAGGGAACATGAAGGTTGGTGTGATCACTGAATGGAAGGATATTCCTGTTGAGCTTTTGATGCAGATTCTGTCTCTTGTGGATGATCAGACGGTGATTCGAGCTTCTGGTGTTTGTCGTGGTTGGAGAGATTCTATTTACTTTGGCCTTGCTCGTTTATCACTTTCATGGTGTAACAAGAACATGAACAACTTGGTCCTATCTCTTGTTCCCAAGTTTGCAAAACTGCAAACTCTAATCCTTCGTCAAGATAAGCCACAACTGGACGACAATGTTGTTGGCACTATTGCAAATTTCTGTCATGACCTGCAGATTCTTGACCTCAGCAAAAGTTTCAAGCTCACTGATTGTTCACTGTATGCTATTGCTCATGGTTGCCGTGATCTGACAAAACTAAACATCAGTGGATGTTCAGCATTTAGTGACAATGCTCTGGCCTACCTTGCTGGTTTCTGTAGAAAACTGAAAGTTCTAAATCTATGTGGATGTGTTAGAGCAGCTTCTGATACTGCACTTCAGGCTATTGGACACTACTGCAATCAGTTGCAGTCTTTGAACCTTGGATGGTGTGACAAAGTTGGTGATGTTGGAGTGATGAGTCTAGCATATGGTTGTCCTGATCTAAGAACAGTTGATTTGTGTGGCTGTGTCTATATAACAGATGATAGTGTGATTGCTTTGGCAAACGGATGCCCTCACCTGAGGTCCCTTGGACTGTACTTCTGCAAGAACATAACAGACAATGCCATGTATTCATTGGCACAAAGCAAAGTGAAGAACAGGATGTGGGGATCTGTGAAAGGAGGAAATGATGAAGATGGACTAAGGACATTGAACATCAGCCAGTGCACTTCACTCACTCCTTCAGCTGTTCAGGCGGTTTGTGACTCATCTCCTGCTCTCCACACATGCTCAGGGAGGCATTCACTCATCATGAGTGGCTGTCTCAATTTGACCGAAGTCCATTGTGCTTGTGCTGGTCATGCACACCGTGCAATGAACGCTTTCCCTCATCCTGCTCATTAA
Protein sequence

>Msa0982440

MVGKDNLKTEDLNLFFENLMMVAGGEKGGNMKVGVITEWKDIPVELLMQILSLVDDQTVIRASGVCRGWRDSIYFGLARLSLSWCNKNMNNLVLSLVPKFAKLQTLILRQDKPQLDDNVVGTIANFCHDLQILDLSKSFKLTDCSLYAIAHGCRDLTKLNISGCSAFSDNALAYLAGFCRKLKVLNLCGCVRAASDTALQAIGHYCNQLQSLNLGWCDKVGDVGVMSLAYGCPDLRTVDLCGCVYITDDSVIALANGCPHLRSLGLYFCKNITDNAMYSLAQSKVKNRMWGSVKGGNDEDGLRTLNISQCTSLTPSAVQAVCDSSPALHTCSGRHSLIMSGCLNLTEVHCACAGHAHRAMNAFPHPAH*