Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471940 | XP_003602331.2 | 96.751 | 831 | 12 | 1 | 1 | 831 | 1 | 816 | 0.0 | 1654 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471940 | G7J883 | 96.751 | 831 | 12 | 1 | 1 | 831 | 1 | 816 | 0.0 | 1654 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0079280 | Msa0471940 | 0.803643 | 3.160777e-49 | -8.615850e-47 |
| Msa0427760 | Msa0471940 | 0.815206 | 1.040940e-51 | -8.615850e-47 |
| Msa0427950 | Msa0471940 | 0.821842 | 3.255895e-53 | -8.615850e-47 |
| Msa0471940 | Msa0799450 | 0.804281 | 2.328694e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471940 | MtrunA17_Chr3g0127581 | 96.519 | 833 | 12 | 2 | 1 | 831 | 1 | 818 | 0.0 | 1647 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471940 | AT5G53620.2 | 46.323 | 775 | 310 | 15 | 1 | 768 | 1 | 676 | 0.0 | 583 |
| Msa0471940 | AT5G53620.1 | 46.323 | 775 | 310 | 15 | 1 | 768 | 1 | 676 | 0.0 | 583 |
| Msa0471940 | AT5G53620.3 | 46.323 | 775 | 310 | 15 | 1 | 768 | 1 | 676 | 0.0 | 583 |
Find 204 sgRNAs with CRISPR-Local
Find 516 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGATTACAAAAGAAAATT+TGG | 0.084126 | 3_3:+74343003 | Msa0471940:CDS |
| CATTTACTGGGACTGAATTT+TGG | 0.084353 | 3_3:-74343881 | None:intergenic |
| CTTGCTCAGCTAATAATATT+TGG | 0.152033 | 3_3:-74342609 | None:intergenic |
| CAATTTCAATTTCAATTTCT+AGG | 0.199283 | 3_3:+74337337 | Msa0471940:five_prime_UTR |
| ACAAAGAACTAGCATCTTTC+AGG | 0.200494 | 3_3:+74339159 | Msa0471940:CDS |
| AACTCTTACTAGAGACTATT+TGG | 0.213024 | 3_3:+74341782 | Msa0471940:CDS |
| ATTAGAATGAAATGAGAAAA+AGG | 0.231067 | 3_3:-74337271 | None:intergenic |
| AATTATGAAATGTCTGTTAA+TGG | 0.234329 | 3_3:+74341756 | Msa0471940:CDS |
| TAACAATGCCAGCAAGTTTC+AGG | 0.256817 | 3_3:+74338576 | Msa0471940:CDS |
| GAAACTAACCTTCCATTTAC+TGG | 0.260887 | 3_3:-74343894 | None:intergenic |
| TCGTCCGATTGCCCAAGTTT+TGG | 0.277223 | 3_3:-74338242 | None:intergenic |
| CAAAATTCAGTCCCAGTAAA+TGG | 0.281567 | 3_3:+74343882 | Msa0471940:CDS |
| TCATGAGCTGGAAAGGAAAA+TGG | 0.284608 | 3_3:+74338961 | Msa0471940:CDS |
| GGCGGCAGCTGCGGCGGCCG+TGG | 0.300977 | 3_3:-74337432 | None:intergenic |
| GGCTGTTTCAGAGGGTTTGC+AGG | 0.304125 | 3_3:+74341665 | Msa0471940:intron |
| CACAATTATCTGTTGGAAAC+GGG | 0.308485 | 3_3:+74343826 | Msa0471940:CDS |
| CAAACCTTCATTTCACCATT+TGG | 0.311690 | 3_3:-74342059 | None:intergenic |
| GCCGCGAGCGGCGGCAGCTG+CGG | 0.315055 | 3_3:-74337441 | None:intergenic |
| CAATTTCAATTTCTAGGGTT+AGG | 0.317610 | 3_3:+74337343 | Msa0471940:five_prime_UTR |
| GCTCCATATGGACAGGAAAA+TGG | 0.319658 | 3_3:+74340061 | Msa0471940:CDS |
| CGGTCGAAGGAGATTTCTTT+AGG | 0.320659 | 3_3:-74343701 | None:intergenic |
| ATTATGAAATGTCTGTTAAT+GGG | 0.330436 | 3_3:+74341757 | Msa0471940:CDS |
| GCCTTTGACTAACAGCATTA+AGG | 0.336031 | 3_3:-74338450 | None:intergenic |
| TTCTGGCAATCCGTCAATTC+AGG | 0.336564 | 3_3:+74340177 | Msa0471940:CDS |
| GGAAATCAATTTGACTTGAA+TGG | 0.341809 | 3_3:+74340082 | Msa0471940:CDS |
| AAATCTGTTGTAAGCTTTGT+TGG | 0.344986 | 3_3:-74341995 | None:intergenic |
| GGAAAATGGAAGAGAAAGAC+AGG | 0.355765 | 3_3:+74338975 | Msa0471940:CDS |
| GAGCGTTGGCAATTAGAAAA+TGG | 0.362769 | 3_3:-74344763 | None:intergenic |
| GACATGTGATGCAACAGAAT+TGG | 0.366789 | 3_3:-74341479 | None:intergenic |
| TATCTGAGTTCTCATTTGTA+AGG | 0.370158 | 3_3:-74340135 | None:intergenic |
| TAGACAACTTATTGAGTTGC+AGG | 0.371209 | 3_3:+74339355 | Msa0471940:CDS |
| ATGACTGGTTTGTTGTTGAT+TGG | 0.378714 | 3_3:-74339563 | None:intergenic |
| AATGCTTCAGGTGGAAATAC+TGG | 0.392132 | 3_3:+74340109 | Msa0471940:CDS |
| AATATACACCTGAAACTTGC+TGG | 0.393867 | 3_3:-74338584 | None:intergenic |
| CAAAAGAAAATTTGGGAAGC+TGG | 0.393976 | 3_3:+74343011 | Msa0471940:CDS |
| CTCCTTCGACCGACTCCAAT+GGG | 0.394838 | 3_3:+74343712 | Msa0471940:CDS |
| CAAATCAGTACCTCATCGTC+AGG | 0.395061 | 3_3:-74337539 | None:intergenic |
| ATGATTACAAAAGAAAATTT+GGG | 0.395780 | 3_3:+74343004 | Msa0471940:CDS |
| GGATTGCCAGAAGTTGAAAA+TGG | 0.399649 | 3_3:-74340166 | None:intergenic |
| AACAACAAACCAGTCATTAC+AGG | 0.401306 | 3_3:+74339569 | Msa0471940:CDS |
| GGGGCGTGCTTCAGTGTTGC+TGG | 0.403988 | 3_3:+74343732 | Msa0471940:CDS |
| GTAGGCATATATGAAGAATA+AGG | 0.405354 | 3_3:-74343645 | None:intergenic |
| AATTTCAATTTCTAGGGTTA+GGG | 0.408038 | 3_3:+74337344 | Msa0471940:five_prime_UTR |
| TTGAATGGAGGCAATGCTTC+AGG | 0.408367 | 3_3:+74340097 | Msa0471940:CDS |
| TAAACCAAATGGTGAAATGA+AGG | 0.415290 | 3_3:+74342055 | Msa0471940:CDS |
| CTCCTTCAGTTGAGCCTCAT+AGG | 0.416295 | 3_3:-74338548 | None:intergenic |
| CCAGGTGGAAGGTACGGGTG+GGG | 0.426365 | 3_3:-74341409 | None:intergenic |
| ACTTTATTCAACTCCGTGAC+GGG | 0.426831 | 3_3:+74343556 | Msa0471940:CDS |
| GCCGCAGCTGCCGCCGCTCG+CGG | 0.427900 | 3_3:+74337440 | Msa0471940:CDS |
| ACATGTGATGCAACAGAATT+GGG | 0.428541 | 3_3:-74341478 | None:intergenic |
| GCGAGCGGCGGCAGCTGCGG+CGG | 0.433380 | 3_3:-74337438 | None:intergenic |
| CAGGTGGAAGGTACGGGTGG+GGG | 0.434721 | 3_3:-74341408 | None:intergenic |
| ACAAATGAGAACTCAGATAA+TGG | 0.438171 | 3_3:+74340139 | Msa0471940:CDS |
| AATTTCAATTTCAATTTCTA+GGG | 0.439229 | 3_3:+74337338 | Msa0471940:five_prime_UTR |
| ACAGTTGAGGCGAATGCTTC+AGG | 0.441358 | 3_3:-74342712 | None:intergenic |
| AATCTGTTGTAAGCTTTGTT+GGG | 0.444391 | 3_3:-74341994 | None:intergenic |
| GCTGAGCAAGCAAGTTCTGC+TGG | 0.445089 | 3_3:+74342622 | Msa0471940:CDS |
| ACTTATTGAGTTGCAGGAAC+AGG | 0.445679 | 3_3:+74339361 | Msa0471940:CDS |
| GACCAGGTGGAAGGTACGGG+TGG | 0.446434 | 3_3:-74341411 | None:intergenic |
| AGTAATTTATTTCTCCCCTT+CGG | 0.450572 | 3_3:+74344625 | Msa0471940:three_prime_UTR |
| TCATCAAGAAGAGCAGCATC+TGG | 0.453469 | 3_3:-74342766 | None:intergenic |
| AAACCCAAAACTTGGGCAAT+CGG | 0.455676 | 3_3:+74338238 | Msa0471940:CDS |
| CAGATAATTGTGCAGACGGC+TGG | 0.459597 | 3_3:-74343815 | None:intergenic |
| AAAAGTAACGTAGCTCCATA+TGG | 0.459769 | 3_3:+74340049 | Msa0471940:CDS |
| GTGGCGGTAGTTTGCAGAGA+TGG | 0.461528 | 3_3:+74339919 | Msa0471940:intron |
| ATTCGAATTCGTCCAGCAGC+TGG | 0.462121 | 3_3:-74342823 | None:intergenic |
| CGCAGTTCTCTGAGGCCTTG+AGG | 0.465543 | 3_3:+74342021 | Msa0471940:CDS |
| GCACAATTATCTGTTGGAAA+CGG | 0.470109 | 3_3:+74343825 | Msa0471940:CDS |
| AAGCACTGCACCTGAATTGA+CGG | 0.472312 | 3_3:-74340187 | None:intergenic |
| CAGTCGACGGTGCCCCAGAA+GGG | 0.475042 | 3_3:-74337392 | None:intergenic |
| GCAACAGTGGCAAAATCAAC+AGG | 0.476371 | 3_3:+74341552 | Msa0471940:CDS |
| AGGCGGTGAGATTGAGCCAT+TGG | 0.476800 | 3_3:-74343681 | None:intergenic |
| GTGCGCACTATTCCAGCTGC+TGG | 0.478390 | 3_3:+74342811 | Msa0471940:CDS |
| AAACTAACCTTCCATTTACT+GGG | 0.479381 | 3_3:-74343893 | None:intergenic |
| ATAAATTACTACAGAATATG+TGG | 0.482920 | 3_3:-74344612 | None:intergenic |
| CAAACTATGATTTGAGTTGT+CGG | 0.488605 | 3_3:+74344583 | Msa0471940:three_prime_UTR |
| TCATCGTTAGATGATGTCAC+TGG | 0.494151 | 3_3:-74342574 | None:intergenic |
| TGAGGAGGCATTATCCTGTA+TGG | 0.494656 | 3_3:-74341691 | None:intergenic |
| AAGAGCAACGCCGCGAGCGG+CGG | 0.496553 | 3_3:-74337450 | None:intergenic |
| GCAGCAAGGAAGAGAGCCCC+TGG | 0.498790 | 3_3:+74338363 | Msa0471940:intron |
| CTGAAGAGCAACGCCGCGAG+CGG | 0.498974 | 3_3:-74337453 | None:intergenic |
| AACTCAAATCATAGTTTGCT+CGG | 0.500815 | 3_3:-74344578 | None:intergenic |
| GGAGACAATTATGTTTAAAG+AGG | 0.500846 | 3_3:+74339485 | Msa0471940:CDS |
| GCAATTCAGCCTGTAATGAC+TGG | 0.500979 | 3_3:-74339578 | None:intergenic |
| GCAGGAGCAACTTTGTGAAA+GGG | 0.503717 | 3_3:+74338928 | Msa0471940:intron |
| TGCAGGAGCAACTTTGTGAA+AGG | 0.506108 | 3_3:+74338927 | Msa0471940:intron |
| AAAACAGCTCCCTAACAGAC+TGG | 0.506909 | 3_3:+74342954 | Msa0471940:intron |
| GAGTTAGAAAACCCAAAACT+TGG | 0.508255 | 3_3:+74338230 | Msa0471940:CDS |
| ACTTGACCAGGTGGAAGGTA+CGG | 0.510432 | 3_3:-74341415 | None:intergenic |
| AGACTCCGCCACGGAAAGAA+TGG | 0.511259 | 3_3:+74337480 | Msa0471940:CDS |
| GCTAATAATATTTGGCTCGC+AGG | 0.513407 | 3_3:-74342601 | None:intergenic |
| TCAGGGAAGGTGGAGGGCAT+AGG | 0.516150 | 3_3:+74344459 | Msa0471940:intron |
| CGGAACAATATAATCAGCTA+TGG | 0.522814 | 3_3:+74339610 | Msa0471940:CDS |
| TCTCCTTCGACCGACTCCAA+TGG | 0.522920 | 3_3:+74343711 | Msa0471940:CDS |
| CTGTGTCGCCAGGTCGAGGA+TGG | 0.523670 | 3_3:+74344487 | Msa0471940:three_prime_UTR |
| CCTTGTTGATGCATAACAAA+TGG | 0.523921 | 3_3:-74341451 | None:intergenic |
| CTTTCAGAATAGGGTTGCGC+AGG | 0.523946 | 3_3:+74339464 | Msa0471940:intron |
| GGGTTTGCAGGTATCCATAC+AGG | 0.524632 | 3_3:+74341677 | Msa0471940:CDS |
| GGAGCGTGCAATTCATGAGC+TGG | 0.524709 | 3_3:+74338949 | Msa0471940:CDS |
| ATAGGTTAACCTGTGTCGCC+AGG | 0.525407 | 3_3:+74344477 | Msa0471940:three_prime_UTR |
| TTTATATTCAGGGAAGGTGG+AGG | 0.526013 | 3_3:+74344452 | Msa0471940:intron |
| ATGGATGAATGTACAGAGAC+AGG | 0.526725 | 3_3:+74339629 | Msa0471940:CDS |
| TAACCTGTGTCGCCAGGTCG+AGG | 0.527022 | 3_3:+74344483 | Msa0471940:three_prime_UTR |
| GCCCCATTGGAGTCGGTCGA+AGG | 0.530073 | 3_3:-74343714 | None:intergenic |
| CTGTTTATATTCAGGGAAGG+TGG | 0.530290 | 3_3:+74344449 | Msa0471940:intron |
| TCAGTCAAAAGATGCAATGC+AGG | 0.535772 | 3_3:-74344700 | None:intergenic |
| GTGCAATTCATGAGCTGGAA+AGG | 0.537916 | 3_3:+74338954 | Msa0471940:CDS |
| TGGTTGTGGCGAATTTCGAC+CGG | 0.538315 | 3_3:-74337228 | None:intergenic |
| TAACGTAGCTCCATATGGAC+AGG | 0.538723 | 3_3:+74340054 | Msa0471940:CDS |
| TGGTGAAAGATGATTGGTTG+TGG | 0.539553 | 3_3:-74337242 | None:intergenic |
| TTTCAGACTGATCATACTCA+TGG | 0.539619 | 3_3:+74341355 | Msa0471940:intron |
| CTGTGGTTTCATCATCCACT+GGG | 0.539734 | 3_3:+74341838 | Msa0471940:CDS |
| CTTGACCAGGTGGAAGGTAC+GGG | 0.540110 | 3_3:-74341414 | None:intergenic |
| GGCTGAATTGCGAGAGCGCA+CGG | 0.541435 | 3_3:+74339590 | Msa0471940:CDS |
| GTCACTGGATTCTGCTCATG+TGG | 0.542067 | 3_3:-74342559 | None:intergenic |
| ACAGTCGACGGTGCCCCAGA+AGG | 0.542256 | 3_3:-74337393 | None:intergenic |
| CAGTATGTGCCTCCTCGCCT+TGG | 0.542549 | 3_3:-74341818 | None:intergenic |
| ACTGTGGTTTCATCATCCAC+TGG | 0.543174 | 3_3:+74341837 | Msa0471940:CDS |
| ATAGTTGACATTGTGGGCAC+TGG | 0.543703 | 3_3:-74341529 | None:intergenic |
| GGACGAGAGAACTATATATG+AGG | 0.546394 | 3_3:+74338259 | Msa0471940:CDS |
| AAGGCGTGAAATACTTCAGA+TGG | 0.547959 | 3_3:+74338468 | Msa0471940:CDS |
| CATCCTCGACCTGGCGACAC+AGG | 0.550426 | 3_3:-74344486 | None:intergenic |
| GAAAATGCGAAACACCTATG+AGG | 0.551985 | 3_3:+74338534 | Msa0471940:CDS |
| CCCCACCCGTACCTTCCACC+TGG | 0.556388 | 3_3:+74341409 | Msa0471940:CDS |
| GACTTTATTCAACTCCGTGA+CGG | 0.558464 | 3_3:+74343555 | Msa0471940:CDS |
| AAATGCTTGCACCTCTACAT+TGG | 0.559025 | 3_3:+74342980 | Msa0471940:CDS |
| AGTCGACGGTGCCCCAGAAG+GGG | 0.560815 | 3_3:-74337391 | None:intergenic |
| TTTAAAAGAGTTCAACCTCA+AGG | 0.561244 | 3_3:-74342036 | None:intergenic |
| TTGATCAGCTTGTGATGAGG+AGG | 0.562069 | 3_3:-74341706 | None:intergenic |
| AACACTGAAGCACGCCCCAT+TGG | 0.562093 | 3_3:-74343727 | None:intergenic |
| ATGCTGCTCTTCTTGATGAA+AGG | 0.562824 | 3_3:+74342770 | Msa0471940:CDS |
| ACCAGGTGGAAGGTACGGGT+GGG | 0.566314 | 3_3:-74341410 | None:intergenic |
| ATCATCCACTGGGGAAACAC+AGG | 0.567207 | 3_3:+74341848 | Msa0471940:CDS |
| GTGGCGAATTTCGACCGGCA+CGG | 0.567729 | 3_3:-74337223 | None:intergenic |
| GCTGATGCAAGAGAGAGGAC+TGG | 0.567893 | 3_3:+74339986 | Msa0471940:CDS |
| CCGTCTGCACAATTATCTGT+TGG | 0.569386 | 3_3:+74343819 | Msa0471940:CDS |
| CACCTATGAGGCTCAACTGA+AGG | 0.573626 | 3_3:+74338546 | Msa0471940:CDS |
| GATAACCCGTGTTCGTGAGA+TGG | 0.574776 | 3_3:+74339533 | Msa0471940:CDS |
| AGCATCTGGAGCCTTTGCAA+TGG | 0.574975 | 3_3:-74342752 | None:intergenic |
| AATCAATTTGACTTGAATGG+AGG | 0.575465 | 3_3:+74340085 | Msa0471940:CDS |
| CCAACAGATAATTGTGCAGA+CGG | 0.579289 | 3_3:-74343819 | None:intergenic |
| TCCTTAATGCTGTTAGTCAA+AGG | 0.580857 | 3_3:+74338449 | Msa0471940:CDS |
| ACAATTATCTGTTGGAAACG+GGG | 0.585035 | 3_3:+74343827 | Msa0471940:CDS |
| ATATGTTTCCATCCTCGACC+TGG | 0.585434 | 3_3:-74344495 | None:intergenic |
| AACATCCATCTCACGAACAC+GGG | 0.585933 | 3_3:-74339538 | None:intergenic |
| AAGACTCACTATCTTCGAGA+AGG | 0.587429 | 3_3:-74344053 | None:intergenic |
| TACTGTAGCAGTTACTCCAA+TGG | 0.592478 | 3_3:+74343665 | Msa0471940:CDS |
| TTCAGTTGCAGACTCCGCCA+CGG | 0.593374 | 3_3:+74337471 | Msa0471940:CDS |
| GTCGACGGTGCCCCAGAAGG+GGG | 0.597227 | 3_3:-74337390 | None:intergenic |
| AAACATCCATCTCACGAACA+CGG | 0.597650 | 3_3:-74339539 | None:intergenic |
| CACACTAAATTGAAACCGAA+GGG | 0.598161 | 3_3:-74344640 | None:intergenic |
| CATGTCCCTCAGTCTCATGT+TGG | 0.599416 | 3_3:+74341496 | Msa0471940:CDS |
| ATTCAGTCCCAGTAAATGGA+AGG | 0.600595 | 3_3:+74343886 | Msa0471940:CDS |
| GAAGCACGCCCCATTGGAGT+CGG | 0.602495 | 3_3:-74343721 | None:intergenic |
| TTGTAATCATGCCAATGTAG+AGG | 0.602805 | 3_3:-74342991 | None:intergenic |
| GCACACTAAATTGAAACCGA+AGG | 0.603926 | 3_3:-74344641 | None:intergenic |
| TGTTGCATAGTTGACATTGT+GGG | 0.606112 | 3_3:-74341535 | None:intergenic |
| AACTTCAACAACCATTGCAA+AGG | 0.606153 | 3_3:+74342741 | Msa0471940:CDS |
| ACAGCACGCCATTCTTTCCG+TGG | 0.608002 | 3_3:-74337488 | None:intergenic |
| TTATATTCAGGGAAGGTGGA+GGG | 0.610798 | 3_3:+74344453 | Msa0471940:intron |
| TAATGGTGTTCACACCGTGC+CGG | 0.611569 | 3_3:+74337209 | None:intergenic |
| AGACTCACTATCTTCGAGAA+GGG | 0.612040 | 3_3:-74344052 | None:intergenic |
| AGCTAGCTGATGCAAGAGAG+AGG | 0.613822 | 3_3:+74339981 | Msa0471940:CDS |
| TGCAATGCAGTAACTTGACC+AGG | 0.616534 | 3_3:-74341427 | None:intergenic |
| CAGTAACTTGACCAGGTGGA+AGG | 0.617894 | 3_3:-74341420 | None:intergenic |
| TAAAGAGGAACAGATTAGAG+AGG | 0.618492 | 3_3:+74339500 | Msa0471940:CDS |
| AGATTAGAGAGGCTCAAGCA+TGG | 0.618985 | 3_3:+74339511 | Msa0471940:CDS |
| AGTTAGAAAACCCAAAACTT+GGG | 0.623046 | 3_3:+74338231 | Msa0471940:CDS |
| CCATTTGTTATGCATCAACA+AGG | 0.623637 | 3_3:+74341451 | Msa0471940:CDS |
| AAACAGCTCCCTAACAGACT+GGG | 0.625345 | 3_3:+74342955 | Msa0471940:intron |
| TCTGTTGCAAGTCATTCTGT+TGG | 0.629601 | 3_3:+74342655 | Msa0471940:CDS |
| GCGTGCTTCAGTGTTGCTGG+AGG | 0.632512 | 3_3:+74343735 | Msa0471940:CDS |
| CTTTATTCAACTCCGTGACG+GGG | 0.632898 | 3_3:+74343557 | Msa0471940:CDS |
| TGAAGTTGTCTGCACAGTTG+AGG | 0.634360 | 3_3:-74342725 | None:intergenic |
| CAATTATCTGTTGGAAACGG+GGG | 0.634415 | 3_3:+74343828 | Msa0471940:CDS |
| AATGGAGGCAATGCTTCAGG+TGG | 0.637332 | 3_3:+74340100 | Msa0471940:CDS |
| TGCGAGAAACCCTGACGATG+AGG | 0.637451 | 3_3:+74337529 | Msa0471940:CDS |
| GATTTCTTCGCAGTTCTCTG+AGG | 0.639781 | 3_3:+74342013 | Msa0471940:CDS |
| CCAAACCTGTGTTTCCCCAG+TGG | 0.643721 | 3_3:-74341853 | None:intergenic |
| TGCTCATGTTCACCAAGGCG+AGG | 0.643835 | 3_3:+74341806 | Msa0471940:CDS |
| ATTGGAGTAACTGCTACAGT+AGG | 0.644685 | 3_3:-74343663 | None:intergenic |
| TGATCATACTAAGTCTGTCG+AGG | 0.651918 | 3_3:-74343854 | None:intergenic |
| CTGTTGCATAGTTGACATTG+TGG | 0.652001 | 3_3:-74341536 | None:intergenic |
| GGAGCGTGATCATTCAGAAG+CGG | 0.658990 | 3_3:+74339274 | Msa0471940:CDS |
| AATTAAACTAGATAATGAAG+CGG | 0.660456 | 3_3:+74339009 | Msa0471940:CDS |
| CAATGTCAACTATGCAACAG+TGG | 0.661238 | 3_3:+74341539 | Msa0471940:CDS |
| TTGCCAGAAGTTGAAAATGG+AGG | 0.661903 | 3_3:-74340163 | None:intergenic |
| GAAAATGGAAGAGAAAGACA+GGG | 0.665029 | 3_3:+74338976 | Msa0471940:CDS |
| CATAAAACAACAACAGTCGA+CGG | 0.665592 | 3_3:-74337405 | None:intergenic |
| AATGTCCAACATGAGACTGA+GGG | 0.667680 | 3_3:-74341501 | None:intergenic |
| AAATCAGTACCTCATCGTCA+GGG | 0.668873 | 3_3:-74337538 | None:intergenic |
| TCGAAGGAGATTTCTTTAGG+CGG | 0.672575 | 3_3:-74343698 | None:intergenic |
| TTGGATGCTCATGTTCACCA+AGG | 0.678018 | 3_3:+74341801 | Msa0471940:CDS |
| AAATGTCCAACATGAGACTG+AGG | 0.680087 | 3_3:-74341502 | None:intergenic |
| GCACGCCATTCTTTCCGTGG+CGG | 0.681342 | 3_3:-74337485 | None:intergenic |
| ACGAATTCGAATCAGTTCAA+CGG | 0.685781 | 3_3:+74342834 | Msa0471940:CDS |
| TCATGTTCACCAAGGCGAGG+AGG | 0.689965 | 3_3:+74341809 | Msa0471940:CDS |
| AGGCGAGGAGGCACATACTG+TGG | 0.691328 | 3_3:+74341821 | Msa0471940:CDS |
| ACACTAAATTGAAACCGAAG+GGG | 0.703685 | 3_3:-74344639 | None:intergenic |
| TCTTCGAGAAGGGTATGCAG+CGG | 0.708586 | 3_3:-74344042 | None:intergenic |
| AGAATAAGGAGATGATGCTG+CGG | 0.712614 | 3_3:-74343631 | None:intergenic |
| TCCTTCGACCGACTCCAATG+GGG | 0.718737 | 3_3:+74343713 | Msa0471940:CDS |
| AATGCAGTAACTTGACCAGG+TGG | 0.756788 | 3_3:-74341424 | None:intergenic |
| TGTGGTTTCATCATCCACTG+GGG | 0.795035 | 3_3:+74341839 | Msa0471940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAAAAAATCAAAATTA+AGG | - | chr3_3:74338150-74338169 | None:intergenic | 10.0% |
| !! | AAATTAATTCCTTATTAATA+GGG | - | chr3_3:74341094-74341113 | None:intergenic | 10.0% |
| !! | AAAATTAATTCCTTATTAAT+AGG | - | chr3_3:74341095-74341114 | None:intergenic | 10.0% |
| !! | TATATTTAAAGACAAATATT+GGG | - | chr3_3:74341907-74341926 | None:intergenic | 10.0% |
| !! | TTATATTTAAAGACAAATAT+TGG | - | chr3_3:74341908-74341927 | None:intergenic | 10.0% |
| !!! | TAATATTTTCAAAAATATTG+TGG | - | chr3_3:74342288-74342307 | None:intergenic | 10.0% |
| !!! | ACAATATTTTTGAAAATATT+AGG | + | chr3_3:74342287-74342306 | Msa0471940:intron | 10.0% |
| !! | AATTTCAATTTCAATTTCTA+GGG | + | chr3_3:74337338-74337357 | Msa0471940:five_prime_UTR | 15.0% |
| !! | AAAAAACAAGAAAAAAAACT+CGG | - | chr3_3:74337623-74337642 | None:intergenic | 15.0% |
| !!! | TTTTTCTTGTTTTTTGAAAT+TGG | + | chr3_3:74337628-74337647 | Msa0471940:intron | 15.0% |
| !!! | AAAGATTATAATTTTACTGT+CGG | + | chr3_3:74337842-74337861 | Msa0471940:intron | 15.0% |
| !! | TTCTAATCTAAATTACAATT+TGG | - | chr3_3:74337909-74337928 | None:intergenic | 15.0% |
| !!! | TCTATAACTTCTAAAAAAAT+TGG | + | chr3_3:74338650-74338669 | Msa0471940:intron | 15.0% |
| !! | TTTAAAAAAAACTGTTTATC+TGG | + | chr3_3:74338901-74338920 | Msa0471940:intron | 15.0% |
| !! | ATTGAATATCTATTTCAAAA+CGG | - | chr3_3:74339748-74339767 | None:intergenic | 15.0% |
| !!! | TTAACTTTATACTTGTTTTT+TGG | + | chr3_3:74339897-74339916 | Msa0471940:intron | 15.0% |
| !! | AAGAAAAAAATAATAAGATC+TGG | - | chr3_3:74341599-74341618 | None:intergenic | 15.0% |
| !!! | TTCTTTCTATTTTTAACTTT+TGG | + | chr3_3:74341614-74341633 | Msa0471940:intron | 15.0% |
| !!! | AAATTTATACTTGTTTTTTC+AGG | + | chr3_3:74341644-74341663 | Msa0471940:intron | 15.0% |
| !!! | TGAATAATTGATTTTTTCTA+AGG | + | chr3_3:74341935-74341954 | Msa0471940:intron | 15.0% |
| !!! | ATTCAAATTTTGATGTTAAT+AGG | - | chr3_3:74342374-74342393 | None:intergenic | 15.0% |
| !! | ATGATTACAAAAGAAAATTT+GGG | + | chr3_3:74343004-74343023 | Msa0471940:CDS | 15.0% |
| !! | AAAAATAACTGAAATGATAA+GGG | - | chr3_3:74343525-74343544 | None:intergenic | 15.0% |
| !! | AGATAAATCTTGAAAAAAAA+CGG | - | chr3_3:74344322-74344341 | None:intergenic | 15.0% |
| !!! | TTTTACTGAATATAAGTTTT+CGG | + | chr3_3:74344369-74344388 | Msa0471940:intron | 15.0% |
| !! | TTAGAATGAAATGAGAAAAA+GGG | - | chr3_3:74337273-74337292 | None:intergenic | 20.0% |
| !! | ATTAGAATGAAATGAGAAAA+AGG | - | chr3_3:74337274-74337293 | None:intergenic | 20.0% |
| !! | CAATTTCAATTTCAATTTCT+AGG | + | chr3_3:74337337-74337356 | Msa0471940:five_prime_UTR | 20.0% |
| !!! | TTTACCATTTTATGATGATT+AGG | + | chr3_3:74337710-74337729 | Msa0471940:intron | 20.0% |
| !!! | TTACCATTTTATGATGATTA+GGG | + | chr3_3:74337711-74337730 | Msa0471940:intron | 20.0% |
| !! | AAACATTCTATACGTATATT+TGG | + | chr3_3:74338608-74338627 | Msa0471940:intron | 20.0% |
| !! | TAAAATTGTTATAATCTCCT+AGG | - | chr3_3:74338741-74338760 | None:intergenic | 20.0% |
| !! | ACATAACTATTATATTCTGA+TGG | + | chr3_3:74338788-74338807 | Msa0471940:intron | 20.0% |
| !! | AATTAAACTAGATAATGAAG+CGG | + | chr3_3:74339009-74339028 | Msa0471940:CDS | 20.0% |
| !! | ATCTCTTCAATTATTTCATT+AGG | + | chr3_3:74339103-74339122 | Msa0471940:intron | 20.0% |
| !! | CATGTCATTACTTAAAATAA+TGG | + | chr3_3:74339864-74339883 | Msa0471940:intron | 20.0% |
| !!! | GTTTTAGGTATAAAATCAAA+TGG | - | chr3_3:74340296-74340315 | None:intergenic | 20.0% |
| !! | ATGTACTATTAATTAACATC+CGG | - | chr3_3:74341058-74341077 | None:intergenic | 20.0% |
| !! | AATTATGAAATGTCTGTTAA+TGG | + | chr3_3:74341756-74341775 | Msa0471940:CDS | 20.0% |
| !! | ATTATGAAATGTCTGTTAAT+GGG | + | chr3_3:74341757-74341776 | Msa0471940:CDS | 20.0% |
| !!! | AAGCATTTTGAATAAAATCA+AGG | - | chr3_3:74342345-74342364 | None:intergenic | 20.0% |
| !! | TTTGTCATTGAAGATAATAA+GGG | - | chr3_3:74342400-74342419 | None:intergenic | 20.0% |
| !! | ATTTGTCATTGAAGATAATA+AGG | - | chr3_3:74342401-74342420 | None:intergenic | 20.0% |
| !! | TTCTCAATAAATTCCTTAAA+AGG | - | chr3_3:74342454-74342473 | None:intergenic | 20.0% |
| !!! | ATTGAGAACTTAATTTCTTT+TGG | + | chr3_3:74342466-74342485 | Msa0471940:intron | 20.0% |
| !! | ATCTTTCATAAAATGTTAGA+TGG | - | chr3_3:74342885-74342904 | None:intergenic | 20.0% |
| !! | CATGATTACAAAAGAAAATT+TGG | + | chr3_3:74343003-74343022 | Msa0471940:CDS | 20.0% |
| !!! | TTCAATTTCACATTTTTCAT+CGG | + | chr3_3:74343465-74343484 | Msa0471940:intron | 20.0% |
| !!! | ATATTTGATTAGAAGTTGAT+GGG | + | chr3_3:74343492-74343511 | Msa0471940:intron | 20.0% |
| !! | AAAATAACTGAAATGATAAG+GGG | - | chr3_3:74343524-74343543 | None:intergenic | 20.0% |
| !! | CAAAAATAACTGAAATGATA+AGG | - | chr3_3:74343526-74343545 | None:intergenic | 20.0% |
| !!! | ATTTCAGTTATTTTTGATTG+AGG | + | chr3_3:74343530-74343549 | Msa0471940:intron | 20.0% |
| !!! | ACTTAACTTTTTCTTTAAAC+AGG | + | chr3_3:74344012-74344031 | Msa0471940:intron | 20.0% |
| !! | ATAAATTACTACAGAATATG+TGG | - | chr3_3:74344615-74344634 | None:intergenic | 20.0% |
| !!! | AAATGAGAAAAAGGGTTTTT+TGG | - | chr3_3:74337265-74337284 | None:intergenic | 25.0% |
| !!! | AATTTCAATTTCTAGGGTTA+GGG | + | chr3_3:74337344-74337363 | Msa0471940:five_prime_UTR | 25.0% |
| !!! | ACATTGTTTTTTTGTAGTGT+GGG | + | chr3_3:74337577-74337596 | Msa0471940:intron | 25.0% |
| ! | AAACCCTAATCATCATAAAA+TGG | - | chr3_3:74337717-74337736 | None:intergenic | 25.0% |
| !!! | TATCATATGACATCGATTTT+CGG | - | chr3_3:74337814-74337833 | None:intergenic | 25.0% |
| ! | AATCGATGTCATATGATATT+TGG | + | chr3_3:74337816-74337835 | Msa0471940:intron | 25.0% |
| ! | AAATACTAACAATCTTTGCT+CGG | - | chr3_3:74338074-74338093 | None:intergenic | 25.0% |
| ! | ACGGTAAGTTATCAAATATT+CGG | - | chr3_3:74338102-74338121 | None:intergenic | 25.0% |
| ! | AACAGTAAAGAGATTATCTT+CGG | - | chr3_3:74338334-74338353 | None:intergenic | 25.0% |
| !!! | AATCTCTTTACTGTTTTTCA+AGG | + | chr3_3:74338339-74338358 | Msa0471940:intron | 25.0% |
| ! | CAATTAAGCATCTAAAAGTT+TGG | - | chr3_3:74338704-74338723 | None:intergenic | 25.0% |
| ! | TTTAGTGACACAAAATAGTA+TGG | + | chr3_3:74338757-74338776 | Msa0471940:intron | 25.0% |
| ! | ATTATATTCTGATGGCTTAA+AGG | + | chr3_3:74338796-74338815 | Msa0471940:intron | 25.0% |
| ! | TTATATTCTGATGGCTTAAA+GGG | + | chr3_3:74338797-74338816 | Msa0471940:intron | 25.0% |
| !! | CTTAAAAGTACAGTAACTTA+AGG | - | chr3_3:74338832-74338851 | None:intergenic | 25.0% |
| !!! | AACTATCTTATTTCGGTTTT+CGG | + | chr3_3:74339049-74339068 | Msa0471940:intron | 25.0% |
| !! | AAGCATCGCATAAATAAATA+TGG | - | chr3_3:74339197-74339216 | None:intergenic | 25.0% |
| ! | TACATTTCTTATCTTCTACA+AGG | + | chr3_3:74339658-74339677 | Msa0471940:intron | 25.0% |
| ! | GTCATTACTTAAAATAATGG+TGG | + | chr3_3:74339867-74339886 | Msa0471940:intron | 25.0% |
| !!! | ACTTTATACTTGTTTTTTGG+TGG | + | chr3_3:74339900-74339919 | Msa0471940:intron | 25.0% |
| ! | GCTGTTGATATTTCATTAAA+TGG | + | chr3_3:74340538-74340557 | Msa0471940:intron | 25.0% |
| !! | AATTTTGTATTCACTTCAAG+AGG | - | chr3_3:74340579-74340598 | None:intergenic | 25.0% |
| !! | CATTACATGTATTGCATTTT+CGG | - | chr3_3:74340761-74340780 | None:intergenic | 25.0% |
| ! | ATTTATGAGGATAAAACTGA+TGG | + | chr3_3:74340848-74340867 | Msa0471940:intron | 25.0% |
| ! | TTAAAGGAGTTAAGAGTTAA+AGG | - | chr3_3:74340953-74340972 | None:intergenic | 25.0% |
| ! | TGTACTATTAATTAACATCC+GGG | - | chr3_3:74341057-74341076 | None:intergenic | 25.0% |
| ! | AAAAATTGTCCCATGTTATT+AGG | + | chr3_3:74341155-74341174 | Msa0471940:intron | 25.0% |
| !!! | AAGTATTGATCAAAGTCAAA+AGG | - | chr3_3:74341190-74341209 | None:intergenic | 25.0% |
| ! | TTATACCAAAGTAAAAGACA+TGG | - | chr3_3:74341261-74341280 | None:intergenic | 25.0% |
| !!! | TTGGTGACTATTGATTTTTA+AGG | + | chr3_3:74341872-74341891 | Msa0471940:intron | 25.0% |
| !! | TTGAACTCTTTTAAACCAAA+TGG | + | chr3_3:74342044-74342063 | Msa0471940:CDS | 25.0% |
| ! | TTGATAGACTAAAGTTCATT+TGG | + | chr3_3:74342128-74342147 | Msa0471940:intron | 25.0% |
| ! | TGATAGACTAAAGTTCATTT+GGG | + | chr3_3:74342129-74342148 | Msa0471940:intron | 25.0% |
| !!! | GTTTCAAATGCTACTTTAAA+TGG | + | chr3_3:74342157-74342176 | Msa0471940:intron | 25.0% |
| !! | ACAAAGATGTCAAGATATTT+TGG | + | chr3_3:74342190-74342209 | Msa0471940:intron | 25.0% |
| ! | TTACCTCAGTGTAATTTATT+TGG | + | chr3_3:74342920-74342939 | Msa0471940:intron | 25.0% |
| ! | AAACCAAATAAATTACACTG+AGG | - | chr3_3:74342926-74342945 | None:intergenic | 25.0% |
| ! | GTGAATCGTAAAAAAAATAG+TGG | - | chr3_3:74343304-74343323 | None:intergenic | 25.0% |
| ! | AAAAATATTGACAGACAACT+TGG | - | chr3_3:74343410-74343429 | None:intergenic | 25.0% |
| !! | AAGTTGTCTGTCAATATTTT+TGG | + | chr3_3:74343409-74343428 | Msa0471940:intron | 25.0% |
| ! | CATATTTGATTAGAAGTTGA+TGG | + | chr3_3:74343491-74343510 | Msa0471940:intron | 25.0% |
| !!! | TAAAATTTTGAGTAAACCCA+AGG | + | chr3_3:74343770-74343789 | Msa0471940:CDS | 25.0% |
| ! | TGCTGAATGATAATATACAT+TGG | + | chr3_3:74343957-74343976 | Msa0471940:intron | 25.0% |
| ! | TTGAAACGATAATAGTTGAA+TGG | + | chr3_3:74343983-74344002 | Msa0471940:intron | 25.0% |
| !! | TCATTCAAATGCAGTTTTTA+GGG | - | chr3_3:74344216-74344235 | None:intergenic | 25.0% |
| !!! | TTCAATTGCTGTTTATATTC+AGG | + | chr3_3:74344441-74344460 | Msa0471940:intron | 25.0% |
| !!! | TCAATTGCTGTTTATATTCA+GGG | + | chr3_3:74344442-74344461 | Msa0471940:intron | 25.0% |
| !!! | GTTTTTTGGTGAAAGATGAT+TGG | - | chr3_3:74337251-74337270 | None:intergenic | 30.0% |
| !! | CAATTTCAATTTCTAGGGTT+AGG | + | chr3_3:74337343-74337362 | Msa0471940:five_prime_UTR | 30.0% |
| !!! | CACATTGTTTTTTTGTAGTG+TGG | + | chr3_3:74337576-74337595 | Msa0471940:intron | 30.0% |
| !!! | GTGTTTTTAGGCATTGATTT+GGG | + | chr3_3:74337680-74337699 | Msa0471940:intron | 30.0% |
| !! | CAAAAAAGCACTGCTAAAAA+TGG | - | chr3_3:74337741-74337760 | None:intergenic | 30.0% |
| !!! | GTTTTTTGTGTTGTTTTTGC+TGG | + | chr3_3:74337875-74337894 | Msa0471940:intron | 30.0% |
| !!! | ACTTTTGCTGTTGAAGTTTA+AGG | + | chr3_3:74338010-74338029 | Msa0471940:intron | 30.0% |
| TTACATATCCAATGACACAA+CGG | - | chr3_3:74338121-74338140 | None:intergenic | 30.0% | |
| ! | TGTGTCATTGGATATGTAAA+AGG | + | chr3_3:74338122-74338141 | Msa0471940:intron | 30.0% |
| ! | GTGTCATTGGATATGTAAAA+GGG | + | chr3_3:74338123-74338142 | Msa0471940:intron | 30.0% |
| GCTGTTAATTGTTATGTGTT+TGG | + | chr3_3:74338170-74338189 | Msa0471940:intron | 30.0% | |
| !! | TTGTTGATTAGCTTAGTTTG+AGG | + | chr3_3:74338202-74338221 | Msa0471940:intron | 30.0% |
| AGTTAGAAAACCCAAAACTT+GGG | + | chr3_3:74338231-74338250 | Msa0471940:CDS | 30.0% | |
| AGAGAACTATATATGAGGTA+AGG | + | chr3_3:74338264-74338283 | Msa0471940:intron | 30.0% | |
| !!! | GAAGCTGCTTTTAAGTTTTA+AGG | + | chr3_3:74338298-74338317 | Msa0471940:intron | 30.0% |
| ACAGTAAAGAGATTATCTTC+GGG | - | chr3_3:74338333-74338352 | None:intergenic | 30.0% | |
| ! | TGATTTTTGTTCGATGACAA+TGG | + | chr3_3:74338390-74338409 | Msa0471940:CDS | 30.0% |
| ATATTTGGATACTCAAGACT+AGG | + | chr3_3:74338623-74338642 | Msa0471940:intron | 30.0% | |
| ! | CTAAAAAAATTGGTTTCCTC+AGG | + | chr3_3:74338660-74338679 | Msa0471940:intron | 30.0% |
| TATATTCTGATGGCTTAAAG+GGG | + | chr3_3:74338798-74338817 | Msa0471940:intron | 30.0% | |
| ! | GCCTCTTAACTATCTTATTT+CGG | + | chr3_3:74339042-74339061 | Msa0471940:intron | 30.0% |
| ACCGAAATAAGATAGTTAAG+AGG | - | chr3_3:74339046-74339065 | None:intergenic | 30.0% | |
| !! | ACTATCTTATTTCGGTTTTC+GGG | + | chr3_3:74339050-74339069 | Msa0471940:intron | 30.0% |
| TTCAATTATTTCATTAGGCG+TGG | + | chr3_3:74339108-74339127 | Msa0471940:intron | 30.0% | |
| TCAATTATTTCATTAGGCGT+GGG | + | chr3_3:74339109-74339128 | Msa0471940:intron | 30.0% | |
| TTAAAGTTTATTCGCTTACG+TGG | + | chr3_3:74339428-74339447 | Msa0471940:intron | 30.0% | |
| CTGATGTTTCTTTCAGAATA+GGG | + | chr3_3:74339455-74339474 | Msa0471940:intron | 30.0% | |
| GGAGACAATTATGTTTAAAG+AGG | + | chr3_3:74339485-74339504 | Msa0471940:CDS | 30.0% | |
| AAGGACATACAATAATAGTG+CGG | - | chr3_3:74339702-74339721 | None:intergenic | 30.0% | |
| AACAGAGACACAAATACAAA+AGG | - | chr3_3:74339721-74339740 | None:intergenic | 30.0% | |
| !! | GTGAGCTTTATATGCATTTT+TGG | + | chr3_3:74339826-74339845 | Msa0471940:intron | 30.0% |
| !!! | TTATACTTGTTTTTTGGTGG+CGG | + | chr3_3:74339903-74339922 | Msa0471940:intron | 30.0% |
| !! | GGAAATCAATTTGACTTGAA+TGG | + | chr3_3:74340082-74340101 | Msa0471940:CDS | 30.0% |
| !! | AATCAATTTGACTTGAATGG+AGG | + | chr3_3:74340085-74340104 | Msa0471940:CDS | 30.0% |
| TATCTGAGTTCTCATTTGTA+AGG | - | chr3_3:74340138-74340157 | None:intergenic | 30.0% | |
| ACAAATGAGAACTCAGATAA+TGG | + | chr3_3:74340139-74340158 | Msa0471940:CDS | 30.0% | |
| GCGTTGCAAATAAAATTTCT+GGG | - | chr3_3:74340263-74340282 | None:intergenic | 30.0% | |
| !! | CATCTTCAAAGAGTTGTTTT+AGG | - | chr3_3:74340311-74340330 | None:intergenic | 30.0% |
| TCATAGATTCATAATGACGT+AGG | + | chr3_3:74340341-74340360 | Msa0471940:intron | 30.0% | |
| !! | TCTAAAGCTCCTCATTTTAA+AGG | - | chr3_3:74340429-74340448 | None:intergenic | 30.0% |
| ! | ATTTTCAATAAACCGACACA+AGG | - | chr3_3:74340647-74340666 | None:intergenic | 30.0% |
| CGAAAATGCAATACATGTAA+TGG | + | chr3_3:74340759-74340778 | Msa0471940:intron | 30.0% | |
| GATTGAGATAGTTGTTAAAC+AGG | + | chr3_3:74340793-74340812 | Msa0471940:intron | 30.0% | |
| ! | AACAGGAATGTTGAATCTTT+TGG | + | chr3_3:74340810-74340829 | Msa0471940:intron | 30.0% |
| GACAGATGAGATAATTTATG+AGG | + | chr3_3:74340835-74340854 | Msa0471940:intron | 30.0% | |
| AGTTAAGAGTTAAAGGTTCA+GGG | - | chr3_3:74340946-74340965 | None:intergenic | 30.0% | |
| TATAACCCACCTAATAACAT+GGG | - | chr3_3:74341167-74341186 | None:intergenic | 30.0% | |
| ! | TTCAATAGACATGTTTTGTC+AGG | + | chr3_3:74341283-74341302 | Msa0471940:intron | 30.0% |
| AACTCTTACTAGAGACTATT+TGG | + | chr3_3:74341782-74341801 | Msa0471940:CDS | 30.0% | |
| !!! | TTTTTCTAAGGTTCTTCAGT+CGG | + | chr3_3:74341947-74341966 | Msa0471940:intron | 30.0% |
| !! | AATCTGTTGTAAGCTTTGTT+GGG | - | chr3_3:74341997-74342016 | None:intergenic | 30.0% |
| ! | AAATCTGTTGTAAGCTTTGT+TGG | - | chr3_3:74341998-74342017 | None:intergenic | 30.0% |
| TTTAAAAGAGTTCAACCTCA+AGG | - | chr3_3:74342039-74342058 | None:intergenic | 30.0% | |
| TAAACCAAATGGTGAAATGA+AGG | + | chr3_3:74342055-74342074 | Msa0471940:CDS | 30.0% | |
| ! | AACAAGTAAAGCATCAAACA+GGG | - | chr3_3:74342099-74342118 | None:intergenic | 30.0% |
| ! | AAACAAGTAAAGCATCAAAC+AGG | - | chr3_3:74342100-74342119 | None:intergenic | 30.0% |
| GATAGACTAAAGTTCATTTG+GGG | + | chr3_3:74342130-74342149 | Msa0471940:intron | 30.0% | |
| ATAGACTAAAGTTCATTTGG+GGG | + | chr3_3:74342131-74342150 | Msa0471940:intron | 30.0% | |
| !! | TCAAATGCTACTTTAAATGG+TGG | + | chr3_3:74342160-74342179 | Msa0471940:intron | 30.0% |
| !!! | ATATTAGGCTGTTTTGAAGA+TGG | + | chr3_3:74342302-74342321 | Msa0471940:intron | 30.0% |
| !!! | CTGTTTTGAAGATGGTAAAA+AGG | + | chr3_3:74342310-74342329 | Msa0471940:intron | 30.0% |
| !! | TTAAAAGGCGCTTCTAAAAT+GGG | - | chr3_3:74342439-74342458 | None:intergenic | 30.0% |
| !! | AACTTAATTTCTTTTGGTGC+TGG | + | chr3_3:74342472-74342491 | Msa0471940:intron | 30.0% |
| !!! | ACTTAATTTCTTTTGGTGCT+GGG | + | chr3_3:74342473-74342492 | Msa0471940:intron | 30.0% |
| ! | ATAATGCTTTTACAGCTGAA+AGG | + | chr3_3:74342511-74342530 | Msa0471940:intron | 30.0% |
| ! | TAATGCTTTTACAGCTGAAA+GGG | + | chr3_3:74342512-74342531 | Msa0471940:intron | 30.0% |
| CTTGCTCAGCTAATAATATT+TGG | - | chr3_3:74342612-74342631 | None:intergenic | 30.0% | |
| GTAACTTCTAAACTTACTTC+AGG | - | chr3_3:74343057-74343076 | None:intergenic | 30.0% | |
| TAAGTTTAGAAGTTACCGTT+TGG | + | chr3_3:74343061-74343080 | Msa0471940:intron | 30.0% | |
| CTAAATTCTATCTGTCCAAA+CGG | - | chr3_3:74343079-74343098 | None:intergenic | 30.0% | |
| TATCAAATAAGGCTCTATAG+TGG | + | chr3_3:74343156-74343175 | Msa0471940:intron | 30.0% | |
| ! | TGAAACTAAATGCTGATTGT+TGG | + | chr3_3:74343336-74343355 | Msa0471940:intron | 30.0% |
| !!! | TGTCTGTCAATATTTTTGGT+TGG | + | chr3_3:74343413-74343432 | Msa0471940:intron | 30.0% |
| GTAGGCATATATGAAGAATA+AGG | - | chr3_3:74343648-74343667 | None:intergenic | 30.0% | |
| ! | ATTTACTGGGACTGAATTTT+GGG | - | chr3_3:74343883-74343902 | None:intergenic | 30.0% |
| AAACTAACCTTCCATTTACT+GGG | - | chr3_3:74343896-74343915 | None:intergenic | 30.0% | |
| ! | GTCATTCAAATGCAGTTTTT+AGG | - | chr3_3:74344217-74344236 | None:intergenic | 30.0% |
| ATACAAACATACAGTGTTTC+TGG | + | chr3_3:74344272-74344291 | Msa0471940:intron | 30.0% | |
| GCAATTGAAATTATGATGCA+TGG | - | chr3_3:74344430-74344449 | None:intergenic | 30.0% | |
| !! | AACTCAAATCATAGTTTGCT+CGG | - | chr3_3:74344581-74344600 | None:intergenic | 30.0% |
| !! | CAAACTATGATTTGAGTTGT+CGG | + | chr3_3:74344583-74344602 | Msa0471940:three_prime_UTR | 30.0% |
| ! | AGTAATTTATTTCTCCCCTT+CGG | + | chr3_3:74344625-74344644 | Msa0471940:three_prime_UTR | 30.0% |
| TTAGTGTGCTTCCAAAAATT+TGG | + | chr3_3:74344655-74344674 | Msa0471940:three_prime_UTR | 30.0% | |
| TAGTGTGCTTCCAAAAATTT+GGG | + | chr3_3:74344656-74344675 | Msa0471940:three_prime_UTR | 30.0% | |
| !! | TCTATTTATTTTCCCCCTTC+TGG | + | chr3_3:74337378-74337397 | Msa0471940:five_prime_UTR | 35.0% |
| !! | CTATTTATTTTCCCCCTTCT+GGG | + | chr3_3:74337379-74337398 | Msa0471940:five_prime_UTR | 35.0% |
| !! | TATTTATTTTCCCCCTTCTG+GGG | + | chr3_3:74337380-74337399 | Msa0471940:five_prime_UTR | 35.0% |
| CATAAAACAACAACAGTCGA+CGG | - | chr3_3:74337408-74337427 | None:intergenic | 35.0% | |
| ! | GAGTTAACCGTAGTTGATTT+GGG | + | chr3_3:74337650-74337669 | Msa0471940:intron | 35.0% |
| CCAAAAACCCAAATCAACTA+CGG | - | chr3_3:74337660-74337679 | None:intergenic | 35.0% | |
| !!! | CGTAGTTGATTTGGGTTTTT+GGG | + | chr3_3:74337658-74337677 | Msa0471940:intron | 35.0% |
| !!! | TTGGGTTTTTGGGTGTTTTT+AGG | + | chr3_3:74337668-74337687 | Msa0471940:intron | 35.0% |
| !!! | GGTGTTTTTAGGCATTGATT+TGG | + | chr3_3:74337679-74337698 | Msa0471940:intron | 35.0% |
| !! | TTAGGCATTGATTTGGGATT+AGG | + | chr3_3:74337686-74337705 | Msa0471940:intron | 35.0% |
| !! | TAGGCATTGATTTGGGATTA+GGG | + | chr3_3:74337687-74337706 | Msa0471940:intron | 35.0% |
| ATCAGACTGCATTGTTCAAA+TGG | - | chr3_3:74337956-74337975 | None:intergenic | 35.0% | |
| CCATAAGCTCAAACTTTACA+AGG | - | chr3_3:74338042-74338061 | None:intergenic | 35.0% | |
| CCTTGTAAAGTTTGAGCTTA+TGG | + | chr3_3:74338039-74338058 | Msa0471940:intron | 35.0% | |
| ATAACTTACCGTTGTGTCAT+TGG | + | chr3_3:74338110-74338129 | Msa0471940:intron | 35.0% | |
| GAGTTAGAAAACCCAAAACT+TGG | + | chr3_3:74338230-74338249 | Msa0471940:CDS | 35.0% | |
| CTATATATGAGGTAAGGTGA+TGG | + | chr3_3:74338270-74338289 | Msa0471940:intron | 35.0% | |
| GAACAAAAATCAACATCCAG+GGG | - | chr3_3:74338382-74338401 | None:intergenic | 35.0% | |
| CGAACAAAAATCAACATCCA+GGG | - | chr3_3:74338383-74338402 | None:intergenic | 35.0% | |
| TCGAACAAAAATCAACATCC+AGG | - | chr3_3:74338384-74338403 | None:intergenic | 35.0% | |
| ! | TTTTGTTCGATGACAATGGA+TGG | + | chr3_3:74338394-74338413 | Msa0471940:CDS | 35.0% |
| TCCTTAATGCTGTTAGTCAA+AGG | + | chr3_3:74338449-74338468 | Msa0471940:CDS | 35.0% | |
| AATATACACCTGAAACTTGC+TGG | - | chr3_3:74338587-74338606 | None:intergenic | 35.0% | |
| TTGTATCCTTTACAACACCT+AGG | + | chr3_3:74338721-74338740 | Msa0471940:intron | 35.0% | |
| ! | TAATCTCCTAGGTGTTGTAA+AGG | - | chr3_3:74338730-74338749 | None:intergenic | 35.0% |
| AACAATTCTTAACCAGTAGG+AGG | - | chr3_3:74338874-74338893 | None:intergenic | 35.0% | |
| ! | TCCTACTGGTTAAGAATTGT+TGG | + | chr3_3:74338873-74338892 | Msa0471940:intron | 35.0% |
| ACCAACAATTCTTAACCAGT+AGG | - | chr3_3:74338877-74338896 | None:intergenic | 35.0% | |
| GAAAATGGAAGAGAAAGACA+GGG | + | chr3_3:74338976-74338995 | Msa0471940:CDS | 35.0% | |
| !!! | CTAGTTCTTTGTTTTGCTCA+CGG | - | chr3_3:74339151-74339170 | None:intergenic | 35.0% |
| ACAAAGAACTAGCATCTTTC+AGG | + | chr3_3:74339159-74339178 | Msa0471940:CDS | 35.0% | |
| ! | TAGACAACTTATTGAGTTGC+AGG | + | chr3_3:74339355-74339374 | Msa0471940:CDS | 35.0% |
| ! | ATTCTGAAAGAAACATCAGC+TGG | - | chr3_3:74339454-74339473 | None:intergenic | 35.0% |
| GCTGATGTTTCTTTCAGAAT+AGG | + | chr3_3:74339454-74339473 | Msa0471940:intron | 35.0% | |
| TAAAGAGGAACAGATTAGAG+AGG | + | chr3_3:74339500-74339519 | Msa0471940:CDS | 35.0% | |
| !! | ATGACTGGTTTGTTGTTGAT+TGG | - | chr3_3:74339566-74339585 | None:intergenic | 35.0% |
| AACAACAAACCAGTCATTAC+AGG | + | chr3_3:74339569-74339588 | Msa0471940:CDS | 35.0% | |
| CGGAACAATATAATCAGCTA+TGG | + | chr3_3:74339610-74339629 | Msa0471940:CDS | 35.0% | |
| TTCAATTCACAGCTGTGATT+TGG | + | chr3_3:74339762-74339781 | Msa0471940:intron | 35.0% | |
| AAAAGTAACGTAGCTCCATA+TGG | + | chr3_3:74340049-74340068 | Msa0471940:CDS | 35.0% | |
| ! | TTTCCATTTTCCTGTCCATA+TGG | - | chr3_3:74340067-74340086 | None:intergenic | 35.0% |
| CGCGTTGCAAATAAAATTTC+TGG | - | chr3_3:74340264-74340283 | None:intergenic | 35.0% | |
| TTCTCATGAACCAAATGCAA+GGG | + | chr3_3:74340395-74340414 | Msa0471940:intron | 35.0% | |
| !! | GAATCTGCTCCTTTAAAATG+AGG | + | chr3_3:74340417-74340436 | Msa0471940:intron | 35.0% |
| AGATCTAAACTTCGCATTGA+TGG | - | chr3_3:74340472-74340491 | None:intergenic | 35.0% | |
| GAGTTAAGAGTTAAAGGTTC+AGG | - | chr3_3:74340947-74340966 | None:intergenic | 35.0% | |
| TACCATAACTTCCAAGCATT+GGG | - | chr3_3:74341010-74341029 | None:intergenic | 35.0% | |
| ATACCATAACTTCCAAGCAT+TGG | - | chr3_3:74341011-74341030 | None:intergenic | 35.0% | |
| ! | CAGTTCTTTTAGTACAAACC+CGG | + | chr3_3:74341036-74341055 | Msa0471940:intron | 35.0% |
| ATTCCTTATTAATAGGGCTG+AGG | - | chr3_3:74341088-74341107 | None:intergenic | 35.0% | |
| AATTGTCCCATGTTATTAGG+TGG | + | chr3_3:74341158-74341177 | Msa0471940:intron | 35.0% | |
| ATTGTCCCATGTTATTAGGT+GGG | + | chr3_3:74341159-74341178 | Msa0471940:intron | 35.0% | |
| GTATAACCCACCTAATAACA+TGG | - | chr3_3:74341168-74341187 | None:intergenic | 35.0% | |
| ! | GTAGTCCATGTCTTTTACTT+TGG | + | chr3_3:74341253-74341272 | Msa0471940:intron | 35.0% |
| ACCACAACAGTATCGTAAAT+GGG | - | chr3_3:74341332-74341351 | None:intergenic | 35.0% | |
| AACCACAACAGTATCGTAAA+TGG | - | chr3_3:74341333-74341352 | None:intergenic | 35.0% | |
| TTTCAGACTGATCATACTCA+TGG | + | chr3_3:74341355-74341374 | Msa0471940:intron | 35.0% | |
| CCTTGTTGATGCATAACAAA+TGG | - | chr3_3:74341454-74341473 | None:intergenic | 35.0% | |
| !! | CCATTTGTTATGCATCAACA+AGG | + | chr3_3:74341451-74341470 | Msa0471940:CDS | 35.0% |
| ACATGTGATGCAACAGAATT+GGG | - | chr3_3:74341481-74341500 | None:intergenic | 35.0% | |
| TGTTGCATAGTTGACATTGT+GGG | - | chr3_3:74341538-74341557 | None:intergenic | 35.0% | |
| !!! | TTTTTTCAGGCTGTTTCAGA+GGG | + | chr3_3:74341657-74341676 | Msa0471940:intron | 35.0% |
| !! | ATTTTGATCAGCTTGTGATG+AGG | - | chr3_3:74341712-74341731 | None:intergenic | 35.0% |
| CAAACCTTCATTTCACCATT+TGG | - | chr3_3:74342062-74342081 | None:intergenic | 35.0% | |
| ! | TGGTGAAATGAAGGTTTGTT+CGG | + | chr3_3:74342064-74342083 | Msa0471940:intron | 35.0% |
| TAGACTAAAGTTCATTTGGG+GGG | + | chr3_3:74342132-74342151 | Msa0471940:intron | 35.0% | |
| !! | TAAAAGGCGCTTCTAAAATG+GGG | - | chr3_3:74342438-74342457 | None:intergenic | 35.0% |
| !! | CTTAAAAGGCGCTTCTAAAA+TGG | - | chr3_3:74342440-74342459 | None:intergenic | 35.0% |
| !!! | CATTTTAGAAGCGCCTTTTA+AGG | + | chr3_3:74342438-74342457 | Msa0471940:intron | 35.0% |
| AACTTCAACAACCATTGCAA+AGG | + | chr3_3:74342741-74342760 | Msa0471940:CDS | 35.0% | |
| ACGAATTCGAATCAGTTCAA+CGG | + | chr3_3:74342834-74342853 | Msa0471940:CDS | 35.0% | |
| AAATTACACTGAGGTAAGCA+GGG | - | chr3_3:74342917-74342936 | None:intergenic | 35.0% | |
| TAAATTACACTGAGGTAAGC+AGG | - | chr3_3:74342918-74342937 | None:intergenic | 35.0% | |
| TTGTAATCATGCCAATGTAG+AGG | - | chr3_3:74342994-74343013 | None:intergenic | 35.0% | |
| CAAAAGAAAATTTGGGAAGC+TGG | + | chr3_3:74343011-74343030 | Msa0471940:CDS | 35.0% | |
| TTAGTGTAGTGATATGCAAC+TGG | + | chr3_3:74343095-74343114 | Msa0471940:intron | 35.0% | |
| ! | ATTTGATAACACGAGCTGAT+TGG | - | chr3_3:74343144-74343163 | None:intergenic | 35.0% |
| TCAGCTCGTGTTATCAAATA+AGG | + | chr3_3:74343145-74343164 | Msa0471940:intron | 35.0% | |
| AGTGTATCGCAGAACAATAA+GGG | - | chr3_3:74343207-74343226 | None:intergenic | 35.0% | |
| AAGTGTATCGCAGAACAATA+AGG | - | chr3_3:74343208-74343227 | None:intergenic | 35.0% | |
| GACAACTCAATGAAAATTGC+TGG | - | chr3_3:74343439-74343458 | None:intergenic | 35.0% | |
| !! | CTATTTTCAGGAGAATCCTT+GGG | - | chr3_3:74343789-74343808 | None:intergenic | 35.0% |
| !! | ACTATTTTCAGGAGAATCCT+TGG | - | chr3_3:74343790-74343809 | None:intergenic | 35.0% |
| GCACAATTATCTGTTGGAAA+CGG | + | chr3_3:74343825-74343844 | Msa0471940:CDS | 35.0% | |
| CACAATTATCTGTTGGAAAC+GGG | + | chr3_3:74343826-74343845 | Msa0471940:CDS | 35.0% | |
| ACAATTATCTGTTGGAAACG+GGG | + | chr3_3:74343827-74343846 | Msa0471940:CDS | 35.0% | |
| ! | CATTTACTGGGACTGAATTT+TGG | - | chr3_3:74343884-74343903 | None:intergenic | 35.0% |
| CAAAATTCAGTCCCAGTAAA+TGG | + | chr3_3:74343882-74343901 | Msa0471940:CDS | 35.0% | |
| GAAACTAACCTTCCATTTAC+TGG | - | chr3_3:74343897-74343916 | None:intergenic | 35.0% | |
| AGACTTACCGTTGAAAACTA+AGG | - | chr3_3:74344187-74344206 | None:intergenic | 35.0% | |
| AAATCTGTGAGTAACTACGA+CGG | - | chr3_3:74344241-74344260 | None:intergenic | 35.0% | |
| !! | TGTTTCTGGTATTTCTGTCT+GGG | + | chr3_3:74344286-74344305 | Msa0471940:intron | 35.0% |
| !! | TTGCTGTTTATATTCAGGGA+AGG | + | chr3_3:74344446-74344465 | Msa0471940:intron | 35.0% |
| ACACTAAATTGAAACCGAAG+GGG | - | chr3_3:74344642-74344661 | None:intergenic | 35.0% | |
| CACACTAAATTGAAACCGAA+GGG | - | chr3_3:74344643-74344662 | None:intergenic | 35.0% | |
| ! | AAGAACCAGACCCAAATTTT+TGG | - | chr3_3:74344669-74344688 | None:intergenic | 35.0% |
| ! | TGGTGAAAGATGATTGGTTG+TGG | - | chr3_3:74337245-74337264 | None:intergenic | 40.0% |
| !!! | CGTCGACTGTTGTTGTTTTA+TGG | + | chr3_3:74337406-74337425 | Msa0471940:exon | 40.0% |
| !!! | CGACTGTTGTTGTTTTATGG+AGG | + | chr3_3:74337409-74337428 | Msa0471940:exon | 40.0% |
| !!! | TTGTTGTTTTATGGAGGCCA+CGG | + | chr3_3:74337415-74337434 | Msa0471940:exon | 40.0% |
| AAATCAGTACCTCATCGTCA+GGG | - | chr3_3:74337541-74337560 | None:intergenic | 40.0% | |
| GGAGTTAACCGTAGTTGATT+TGG | + | chr3_3:74337649-74337668 | Msa0471940:intron | 40.0% | |
| !!! | CCGTAGTTGATTTGGGTTTT+TGG | + | chr3_3:74337657-74337676 | Msa0471940:intron | 40.0% |
| !! | GTGCATTACTTTCAAGTTGC+TGG | + | chr3_3:74337930-74337949 | Msa0471940:intron | 40.0% |
| ! | ATTAGCTTAGTTTGAGGTGC+AGG | + | chr3_3:74338208-74338227 | Msa0471940:intron | 40.0% |
| AAACCCAAAACTTGGGCAAT+CGG | + | chr3_3:74338238-74338257 | Msa0471940:CDS | 40.0% | |
| GGACGAGAGAACTATATATG+AGG | + | chr3_3:74338259-74338278 | Msa0471940:CDS | 40.0% | |
| GCCTTTGACTAACAGCATTA+AGG | - | chr3_3:74338453-74338472 | None:intergenic | 40.0% | |
| AAGGCGTGAAATACTTCAGA+TGG | + | chr3_3:74338468-74338487 | Msa0471940:CDS | 40.0% | |
| ! | CATTTTCAACAGCTCAGATC+TGG | - | chr3_3:74338521-74338540 | None:intergenic | 40.0% |
| GAAAATGCGAAACACCTATG+AGG | + | chr3_3:74338534-74338553 | Msa0471940:CDS | 40.0% | |
| TAACAATGCCAGCAAGTTTC+AGG | + | chr3_3:74338576-74338595 | Msa0471940:CDS | 40.0% | |
| ! | AAAATTGGTTTCCTCAGGTC+AGG | + | chr3_3:74338665-74338684 | Msa0471940:intron | 40.0% |
| ! | TTCTTTTAACACCTGACCTG+AGG | - | chr3_3:74338679-74338698 | None:intergenic | 40.0% |
| TCATGAGCTGGAAAGGAAAA+TGG | + | chr3_3:74338961-74338980 | Msa0471940:CDS | 40.0% | |
| GGAAAATGGAAGAGAAAGAC+AGG | + | chr3_3:74338975-74338994 | Msa0471940:CDS | 40.0% | |
| ! | TGAGCAAATCGTTTTGCAGA+AGG | + | chr3_3:74339252-74339271 | Msa0471940:intron | 40.0% |
| ! | GAGCAAATCGTTTTGCAGAA+GGG | + | chr3_3:74339253-74339272 | Msa0471940:intron | 40.0% |
| ! | ACTTATTGAGTTGCAGGAAC+AGG | + | chr3_3:74339361-74339380 | Msa0471940:CDS | 40.0% |
| AAACATCCATCTCACGAACA+CGG | - | chr3_3:74339542-74339561 | None:intergenic | 40.0% | |
| ATGGATGAATGTACAGAGAC+AGG | + | chr3_3:74339629-74339648 | Msa0471940:CDS | 40.0% | |
| AATGCTTCAGGTGGAAATAC+TGG | + | chr3_3:74340109-74340128 | Msa0471940:CDS | 40.0% | |
| TTGCCAGAAGTTGAAAATGG+AGG | - | chr3_3:74340166-74340185 | None:intergenic | 40.0% | |
| GGATTGCCAGAAGTTGAAAA+TGG | - | chr3_3:74340169-74340188 | None:intergenic | 40.0% | |
| CTTCTCATGAACCAAATGCA+AGG | + | chr3_3:74340394-74340413 | Msa0471940:intron | 40.0% | |
| TATTCACTTCAAGAGGAGAG+AGG | - | chr3_3:74340572-74340591 | None:intergenic | 40.0% | |
| ! | GAAAATTTTGTGCCCAGACA+AGG | + | chr3_3:74340661-74340680 | Msa0471940:intron | 40.0% |
| ! | CATTTTGAACCTCCTTGTCT+GGG | - | chr3_3:74340676-74340695 | None:intergenic | 40.0% |
| ! | TCATTTTGAACCTCCTTGTC+TGG | - | chr3_3:74340677-74340696 | None:intergenic | 40.0% |
| TGGTTGAGCTAAGGGATTAA+AGG | - | chr3_3:74340969-74340988 | None:intergenic | 40.0% | |
| ! | ACCATAACTTCCAAGCATTG+GGG | - | chr3_3:74341009-74341028 | None:intergenic | 40.0% |
| CGGGTTTGTACTAAAAGAAC+TGG | - | chr3_3:74341038-74341057 | None:intergenic | 40.0% | |
| ! | GACATGTTTTGTCAGGAGAT+TGG | + | chr3_3:74341290-74341309 | Msa0471940:intron | 40.0% |
| ACCCATTTACGATACTGTTG+TGG | + | chr3_3:74341328-74341347 | Msa0471940:intron | 40.0% | |
| GACATGTGATGCAACAGAAT+TGG | - | chr3_3:74341482-74341501 | None:intergenic | 40.0% | |
| AATGTCCAACATGAGACTGA+GGG | - | chr3_3:74341504-74341523 | None:intergenic | 40.0% | |
| AAATGTCCAACATGAGACTG+AGG | - | chr3_3:74341505-74341524 | None:intergenic | 40.0% | |
| CTGTTGCATAGTTGACATTG+TGG | - | chr3_3:74341539-74341558 | None:intergenic | 40.0% | |
| CAATGTCAACTATGCAACAG+TGG | + | chr3_3:74341539-74341558 | Msa0471940:CDS | 40.0% | |
| !!! | GTTTTTTCAGGCTGTTTCAG+AGG | + | chr3_3:74341656-74341675 | Msa0471940:intron | 40.0% |
| ! | AAGTAAAGCATCAAACAGGG+CGG | - | chr3_3:74342096-74342115 | None:intergenic | 40.0% |
| !!! | CATGCTTTTGAAGCTTGTTC+AGG | + | chr3_3:74342257-74342276 | Msa0471940:intron | 40.0% |
| TCATCGTTAGATGATGTCAC+TGG | - | chr3_3:74342577-74342596 | None:intergenic | 40.0% | |
| ! | GCTAATAATATTTGGCTCGC+AGG | - | chr3_3:74342604-74342623 | None:intergenic | 40.0% |
| TCTGTTGCAAGTCATTCTGT+TGG | + | chr3_3:74342655-74342674 | Msa0471940:CDS | 40.0% | |
| ATGCTGCTCTTCTTGATGAA+AGG | + | chr3_3:74342770-74342789 | Msa0471940:CDS | 40.0% | |
| AGTTCAACGGTTAGTGTTTG+TGG | + | chr3_3:74342847-74342866 | Msa0471940:intron | 40.0% | |
| AATTACACTGAGGTAAGCAG+GGG | - | chr3_3:74342916-74342935 | None:intergenic | 40.0% | |
| AAATGCTTGCACCTCTACAT+TGG | + | chr3_3:74342980-74342999 | Msa0471940:CDS | 40.0% | |
| GATTGTTGGATGCAATGAAG+TGG | + | chr3_3:74343350-74343369 | Msa0471940:intron | 40.0% | |
| GACTTTATTCAACTCCGTGA+CGG | + | chr3_3:74343555-74343574 | Msa0471940:CDS | 40.0% | |
| ACTTTATTCAACTCCGTGAC+GGG | + | chr3_3:74343556-74343575 | Msa0471940:CDS | 40.0% | |
| AGAATAAGGAGATGATGCTG+CGG | - | chr3_3:74343634-74343653 | None:intergenic | 40.0% | |
| ATTGGAGTAACTGCTACAGT+AGG | - | chr3_3:74343666-74343685 | None:intergenic | 40.0% | |
| TACTGTAGCAGTTACTCCAA+TGG | + | chr3_3:74343665-74343684 | Msa0471940:CDS | 40.0% | |
| TCGAAGGAGATTTCTTTAGG+CGG | - | chr3_3:74343701-74343720 | None:intergenic | 40.0% | |
| ! | GGCTGGACATAACTATTTTC+AGG | - | chr3_3:74343801-74343820 | None:intergenic | 40.0% |
| CCAACAGATAATTGTGCAGA+CGG | - | chr3_3:74343822-74343841 | None:intergenic | 40.0% | |
| CAATTATCTGTTGGAAACGG+GGG | + | chr3_3:74343828-74343847 | Msa0471940:CDS | 40.0% | |
| TGATCATACTAAGTCTGTCG+AGG | - | chr3_3:74343857-74343876 | None:intergenic | 40.0% | |
| ATTCAGTCCCAGTAAATGGA+AGG | + | chr3_3:74343886-74343905 | Msa0471940:CDS | 40.0% | |
| AGACTCACTATCTTCGAGAA+GGG | - | chr3_3:74344055-74344074 | None:intergenic | 40.0% | |
| AAGACTCACTATCTTCGAGA+AGG | - | chr3_3:74344056-74344075 | None:intergenic | 40.0% | |
| !! | GAAAACTAAGGCTGGTCTTA+AGG | - | chr3_3:74344175-74344194 | None:intergenic | 40.0% |
| !! | AGACCAGCCTTAGTTTTCAA+CGG | + | chr3_3:74344177-74344196 | Msa0471940:intron | 40.0% |
| TTACCGTTGAAAACTAAGGC+TGG | - | chr3_3:74344183-74344202 | None:intergenic | 40.0% | |
| ! | AGTTTTCAACGGTAAGTCTC+TGG | + | chr3_3:74344188-74344207 | Msa0471940:intron | 40.0% |
| !! | GTGTTTCTGGTATTTCTGTC+TGG | + | chr3_3:74344285-74344304 | Msa0471940:intron | 40.0% |
| CTGTTTATATTCAGGGAAGG+TGG | + | chr3_3:74344449-74344468 | Msa0471940:intron | 40.0% | |
| TTTATATTCAGGGAAGGTGG+AGG | + | chr3_3:74344452-74344471 | Msa0471940:intron | 40.0% | |
| TTATATTCAGGGAAGGTGGA+GGG | + | chr3_3:74344453-74344472 | Msa0471940:intron | 40.0% | |
| ! | AGTCCTGTTTTACCTGTTTG+CGG | + | chr3_3:74344520-74344539 | Msa0471940:three_prime_UTR | 40.0% |
| GCACACTAAATTGAAACCGA+AGG | - | chr3_3:74344644-74344663 | None:intergenic | 40.0% | |
| TGCTTCCAAAAATTTGGGTC+TGG | + | chr3_3:74344661-74344680 | Msa0471940:three_prime_UTR | 40.0% | |
| TCAGTCAAAAGATGCAATGC+AGG | - | chr3_3:74344703-74344722 | None:intergenic | 40.0% | |
| CAAATCAGTACCTCATCGTC+AGG | - | chr3_3:74337542-74337561 | None:intergenic | 45.0% | |
| !!! | CTGTTTTTCAAGGTGCAGCA+AGG | + | chr3_3:74338349-74338368 | Msa0471940:intron | 45.0% |
| TTCTTAACCAGTAGGAGGCT+AGG | - | chr3_3:74338869-74338888 | None:intergenic | 45.0% | |
| !! | AACTGTTTATCTGGCCTTGC+AGG | + | chr3_3:74338910-74338929 | Msa0471940:intron | 45.0% |
| TTCACAAAGTTGCTCCTGCA+AGG | - | chr3_3:74338927-74338946 | None:intergenic | 45.0% | |
| TGCAGGAGCAACTTTGTGAA+AGG | + | chr3_3:74338927-74338946 | Msa0471940:intron | 45.0% | |
| GCAGGAGCAACTTTGTGAAA+GGG | + | chr3_3:74338928-74338947 | Msa0471940:intron | 45.0% | |
| GTGCAATTCATGAGCTGGAA+AGG | + | chr3_3:74338954-74338973 | Msa0471940:CDS | 45.0% | |
| !!! | GTTCTTTGTTTTGCTCACGG+AGG | - | chr3_3:74339148-74339167 | None:intergenic | 45.0% |
| AGATTAGAGAGGCTCAAGCA+TGG | + | chr3_3:74339511-74339530 | Msa0471940:CDS | 45.0% | |
| AACATCCATCTCACGAACAC+GGG | - | chr3_3:74339541-74339560 | None:intergenic | 45.0% | |
| GCAATTCAGCCTGTAATGAC+TGG | - | chr3_3:74339581-74339600 | None:intergenic | 45.0% | |
| TAACGTAGCTCCATATGGAC+AGG | + | chr3_3:74340054-74340073 | Msa0471940:CDS | 45.0% | |
| GCTCCATATGGACAGGAAAA+TGG | + | chr3_3:74340061-74340080 | Msa0471940:CDS | 45.0% | |
| TTGAATGGAGGCAATGCTTC+AGG | + | chr3_3:74340097-74340116 | Msa0471940:CDS | 45.0% | |
| ! | GGTCCTCCATTTTCAACTTC+TGG | + | chr3_3:74340160-74340179 | Msa0471940:CDS | 45.0% |
| TTCTGGCAATCCGTCAATTC+AGG | + | chr3_3:74340177-74340196 | Msa0471940:CDS | 45.0% | |
| ! | AAGCACTGCACCTGAATTGA+CGG | - | chr3_3:74340190-74340209 | None:intergenic | 45.0% |
| TGAGACTGAGTAGCTATGCA+TGG | + | chr3_3:74340599-74340618 | Msa0471940:intron | 45.0% | |
| !! | TCTTTAGCTCTGCCTTGTGT+CGG | + | chr3_3:74340632-74340651 | Msa0471940:intron | 45.0% |
| ! | AATTTTGTGCCCAGACAAGG+AGG | + | chr3_3:74340664-74340683 | Msa0471940:intron | 45.0% |
| AAGGTTCAGGGTTCGAATCT+TGG | - | chr3_3:74340934-74340953 | None:intergenic | 45.0% | |
| TGCTCACTTGGTTGAGCTAA+GGG | - | chr3_3:74340977-74340996 | None:intergenic | 45.0% | |
| TTGCTCACTTGGTTGAGCTA+AGG | - | chr3_3:74340978-74340997 | None:intergenic | 45.0% | |
| !! | ATAACTTCCAAGCATTGGGG+GGG | - | chr3_3:74341006-74341025 | None:intergenic | 45.0% |
| !! | CATAACTTCCAAGCATTGGG+GGG | - | chr3_3:74341007-74341026 | None:intergenic | 45.0% |
| !! | CCATAACTTCCAAGCATTGG+GGG | - | chr3_3:74341008-74341027 | None:intergenic | 45.0% |
| TATTAATAGGGCTGAGGCTG+TGG | - | chr3_3:74341082-74341101 | None:intergenic | 45.0% | |
| CAGCCTCAGCCCTATTAATA+AGG | + | chr3_3:74341082-74341101 | Msa0471940:intron | 45.0% | |
| AATGCAGTAACTTGACCAGG+TGG | - | chr3_3:74341427-74341446 | None:intergenic | 45.0% | |
| TGCAATGCAGTAACTTGACC+AGG | - | chr3_3:74341430-74341449 | None:intergenic | 45.0% | |
| ATAGTTGACATTGTGGGCAC+TGG | - | chr3_3:74341532-74341551 | None:intergenic | 45.0% | |
| GCAACAGTGGCAAAATCAAC+AGG | + | chr3_3:74341552-74341571 | Msa0471940:CDS | 45.0% | |
| !! | TGAGGAGGCATTATCCTGTA+TGG | - | chr3_3:74341694-74341713 | None:intergenic | 45.0% |
| TTGATCAGCTTGTGATGAGG+AGG | - | chr3_3:74341709-74341728 | None:intergenic | 45.0% | |
| TTGGATGCTCATGTTCACCA+AGG | + | chr3_3:74341801-74341820 | Msa0471940:CDS | 45.0% | |
| ACTGTGGTTTCATCATCCAC+TGG | + | chr3_3:74341837-74341856 | Msa0471940:CDS | 45.0% | |
| CTGTGGTTTCATCATCCACT+GGG | + | chr3_3:74341838-74341857 | Msa0471940:CDS | 45.0% | |
| TGTGGTTTCATCATCCACTG+GGG | + | chr3_3:74341839-74341858 | Msa0471940:CDS | 45.0% | |
| GATTTCTTCGCAGTTCTCTG+AGG | + | chr3_3:74342013-74342032 | Msa0471940:CDS | 45.0% | |
| ACTAAAGTTCATTTGGGGGG+TGG | + | chr3_3:74342135-74342154 | Msa0471940:intron | 45.0% | |
| ! | TGCTTTTACAGCTGAAAGGG+TGG | + | chr3_3:74342515-74342534 | Msa0471940:intron | 45.0% |
| ! | GCTTTTACAGCTGAAAGGGT+GGG | + | chr3_3:74342516-74342535 | Msa0471940:intron | 45.0% |
| TGAAGTTGTCTGCACAGTTG+AGG | - | chr3_3:74342728-74342747 | None:intergenic | 45.0% | |
| TCATCAAGAAGAGCAGCATC+TGG | - | chr3_3:74342769-74342788 | None:intergenic | 45.0% | |
| AAAACAGCTCCCTAACAGAC+TGG | + | chr3_3:74342954-74342973 | Msa0471940:intron | 45.0% | |
| AAACAGCTCCCTAACAGACT+GGG | + | chr3_3:74342955-74342974 | Msa0471940:intron | 45.0% | |
| ! | GCATTTTGCCCAGTCTGTTA+GGG | - | chr3_3:74342966-74342985 | None:intergenic | 45.0% |
| ! | AGCATTTTGCCCAGTCTGTT+AGG | - | chr3_3:74342967-74342986 | None:intergenic | 45.0% |
| TGTTGGATGCAATGAAGTGG+TGG | + | chr3_3:74343353-74343372 | Msa0471940:intron | 45.0% | |
| GTTGGATGCAATGAAGTGGT+GGG | + | chr3_3:74343354-74343373 | Msa0471940:intron | 45.0% | |
| AACTTGGCATGCAGTTGTCT+TGG | - | chr3_3:74343394-74343413 | None:intergenic | 45.0% | |
| CTTTATTCAACTCCGTGACG+GGG | + | chr3_3:74343557-74343576 | Msa0471940:CDS | 45.0% | |
| ! | AGCAACTTTTGCAACAGCAG+CGG | - | chr3_3:74343604-74343623 | None:intergenic | 45.0% |
| CGGTCGAAGGAGATTTCTTT+AGG | - | chr3_3:74343704-74343723 | None:intergenic | 45.0% | |
| CCGTCTGCACAATTATCTGT+TGG | + | chr3_3:74343819-74343838 | Msa0471940:CDS | 45.0% | |
| TCAGCAGCCAATGTCAAACT+GGG | - | chr3_3:74343943-74343962 | None:intergenic | 45.0% | |
| TTCAGCAGCCAATGTCAAAC+TGG | - | chr3_3:74343944-74343963 | None:intergenic | 45.0% | |
| ATATGTTTCCATCCTCGACC+TGG | - | chr3_3:74344498-74344517 | None:intergenic | 45.0% | |
| ! | GTCCTGTTTTACCTGTTTGC+GGG | + | chr3_3:74344521-74344540 | Msa0471940:three_prime_UTR | 45.0% |
| ! | TCCTGTTTTACCTGTTTGCG+GGG | + | chr3_3:74344522-74344541 | Msa0471940:three_prime_UTR | 45.0% |
| TGGTTGTGGCGAATTTCGAC+CGG | - | chr3_3:74337231-74337250 | None:intergenic | 50.0% | |
| TAGTGTGGGTTTGCGTGTGA+TGG | + | chr3_3:74337591-74337610 | Msa0471940:intron | 50.0% | |
| ! | CGTCCGATTGCCCAAGTTTT+GGG | - | chr3_3:74338244-74338263 | None:intergenic | 50.0% |
| ! | TCGTCCGATTGCCCAAGTTT+TGG | - | chr3_3:74338245-74338264 | None:intergenic | 50.0% |
| CACCTATGAGGCTCAACTGA+AGG | + | chr3_3:74338546-74338565 | Msa0471940:CDS | 50.0% | |
| CTCCTTCAGTTGAGCCTCAT+AGG | - | chr3_3:74338551-74338570 | None:intergenic | 50.0% | |
| ATTTGCTCCTAGCCTCCTAC+TGG | + | chr3_3:74338859-74338878 | Msa0471940:intron | 50.0% | |
| !!! | CTTTGTTTTGCTCACGGAGG+AGG | - | chr3_3:74339145-74339164 | None:intergenic | 50.0% |
| CTCAATGAAGCAAGCAGCGA+AGG | - | chr3_3:74339236-74339255 | None:intergenic | 50.0% | |
| GGAGCGTGATCATTCAGAAG+CGG | + | chr3_3:74339274-74339293 | Msa0471940:CDS | 50.0% | |
| CTTTCAGAATAGGGTTGCGC+AGG | + | chr3_3:74339464-74339483 | Msa0471940:intron | 50.0% | |
| GATAACCCGTGTTCGTGAGA+TGG | + | chr3_3:74339533-74339552 | Msa0471940:CDS | 50.0% | |
| AGCTAGCTGATGCAAGAGAG+AGG | + | chr3_3:74339981-74340000 | Msa0471940:CDS | 50.0% | |
| AATGGAGGCAATGCTTCAGG+TGG | + | chr3_3:74340100-74340119 | Msa0471940:CDS | 50.0% | |
| GGAGCAGATTCCCTTGCATT+TGG | - | chr3_3:74340408-74340427 | None:intergenic | 50.0% | |
| GAGTAGCTATGCATGGCTGT+TGG | + | chr3_3:74340606-74340625 | Msa0471940:intron | 50.0% | |
| CAGGGTTCGAATCTTGGCAA+GGG | - | chr3_3:74340928-74340947 | None:intergenic | 50.0% | |
| TCAGGGTTCGAATCTTGGCA+AGG | - | chr3_3:74340929-74340948 | None:intergenic | 50.0% | |
| CCCCCAATGCTTGGAAGTTA+TGG | + | chr3_3:74341005-74341024 | Msa0471940:intron | 50.0% | |
| TGGGGGACAATCAGAGATGA+TGG | - | chr3_3:74341394-74341413 | None:intergenic | 50.0% | |
| ACTTGACCAGGTGGAAGGTA+CGG | - | chr3_3:74341418-74341437 | None:intergenic | 50.0% | |
| CAGTAACTTGACCAGGTGGA+AGG | - | chr3_3:74341423-74341442 | None:intergenic | 50.0% | |
| CATGTCCCTCAGTCTCATGT+TGG | + | chr3_3:74341496-74341515 | Msa0471940:CDS | 50.0% | |
| GGGTTTGCAGGTATCCATAC+AGG | + | chr3_3:74341677-74341696 | Msa0471940:CDS | 50.0% | |
| ATCATCCACTGGGGAAACAC+AGG | + | chr3_3:74341848-74341867 | Msa0471940:CDS | 50.0% | |
| GTCACTGGATTCTGCTCATG+TGG | - | chr3_3:74342562-74342581 | None:intergenic | 50.0% | |
| ACAGTTGAGGCGAATGCTTC+AGG | - | chr3_3:74342715-74342734 | None:intergenic | 50.0% | |
| ! | AGCATCTGGAGCCTTTGCAA+TGG | - | chr3_3:74342755-74342774 | None:intergenic | 50.0% |
| ATTCGAATTCGTCCAGCAGC+TGG | - | chr3_3:74342826-74342845 | None:intergenic | 50.0% | |
| TAGTGGCGCTATATTGCGCA+TGG | + | chr3_3:74343173-74343192 | Msa0471940:intron | 50.0% | |
| ! | TGCAATGAAGTGGTGGGATC+TGG | + | chr3_3:74343360-74343379 | Msa0471940:intron | 50.0% |
| TGGCATGCAGTTGTCTTGGA+TGG | - | chr3_3:74343390-74343409 | None:intergenic | 50.0% | |
| ! | TCATTTTGTGTGCCCCGTCA+CGG | - | chr3_3:74343572-74343591 | None:intergenic | 50.0% |
| CAGATAATTGTGCAGACGGC+TGG | - | chr3_3:74343818-74343837 | None:intergenic | 50.0% | |
| CAGCAGACCCAGTTTGACAT+TGG | + | chr3_3:74343933-74343952 | Msa0471940:intron | 50.0% | |
| ! | TCTTCGAGAAGGGTATGCAG+CGG | - | chr3_3:74344045-74344064 | None:intergenic | 50.0% |
| ATAGGTTAACCTGTGTCGCC+AGG | + | chr3_3:74344477-74344496 | Msa0471940:three_prime_UTR | 50.0% | |
| ! | CCTGTTTTACCTGTTTGCGG+GGG | + | chr3_3:74344523-74344542 | Msa0471940:three_prime_UTR | 50.0% |
| TTCAGTTGCAGACTCCGCCA+CGG | + | chr3_3:74337471-74337490 | Msa0471940:CDS | 55.0% | |
| AGACTCCGCCACGGAAAGAA+TGG | + | chr3_3:74337480-74337499 | Msa0471940:CDS | 55.0% | |
| ACAGCACGCCATTCTTTCCG+TGG | - | chr3_3:74337491-74337510 | None:intergenic | 55.0% | |
| TGCGAGAAACCCTGACGATG+AGG | + | chr3_3:74337529-74337548 | Msa0471940:CDS | 55.0% | |
| GGAGCGTGCAATTCATGAGC+TGG | + | chr3_3:74338949-74338968 | Msa0471940:CDS | 55.0% | |
| ! | GTGGCGGTAGTTTGCAGAGA+TGG | + | chr3_3:74339919-74339938 | Msa0471940:intron | 55.0% |
| GCTGATGCAAGAGAGAGGAC+TGG | + | chr3_3:74339986-74340005 | Msa0471940:CDS | 55.0% | |
| !! | TTCCAAGCATTGGGGGGGAT+GGG | - | chr3_3:74341001-74341020 | None:intergenic | 55.0% |
| ! | CTTGACCAGGTGGAAGGTAC+GGG | - | chr3_3:74341417-74341436 | None:intergenic | 55.0% |
| ! | GGCTGTTTCAGAGGGTTTGC+AGG | + | chr3_3:74341665-74341684 | Msa0471940:intron | 55.0% |
| TGCTCATGTTCACCAAGGCG+AGG | + | chr3_3:74341806-74341825 | Msa0471940:CDS | 55.0% | |
| TCATGTTCACCAAGGCGAGG+AGG | + | chr3_3:74341809-74341828 | Msa0471940:CDS | 55.0% | |
| CCAAACCTGTGTTTCCCCAG+TGG | - | chr3_3:74341856-74341875 | None:intergenic | 55.0% | |
| CCACTGGGGAAACACAGGTT+TGG | + | chr3_3:74341853-74341872 | Msa0471940:intron | 55.0% | |
| GCTGAGCAAGCAAGTTCTGC+TGG | + | chr3_3:74342622-74342641 | Msa0471940:CDS | 55.0% | |
| GCGCTATATTGCGCATGGCA+GGG | + | chr3_3:74343178-74343197 | Msa0471940:intron | 55.0% | |
| AGGCGGTGAGATTGAGCCAT+TGG | - | chr3_3:74343684-74343703 | None:intergenic | 55.0% | |
| ! | TCTCCTTCGACCGACTCCAA+TGG | + | chr3_3:74343711-74343730 | Msa0471940:CDS | 55.0% |
| ! | CTCCTTCGACCGACTCCAAT+GGG | + | chr3_3:74343712-74343731 | Msa0471940:CDS | 55.0% |
| ! | TCCTTCGACCGACTCCAATG+GGG | + | chr3_3:74343713-74343732 | Msa0471940:CDS | 55.0% |
| AACACTGAAGCACGCCCCAT+TGG | - | chr3_3:74343730-74343749 | None:intergenic | 55.0% | |
| CCCCCGCAAACAGGTAAAAC+AGG | - | chr3_3:74344526-74344545 | None:intergenic | 55.0% | |
| GCACGCCATTCTTTCCGTGG+CGG | - | chr3_3:74337488-74337507 | None:intergenic | 60.0% | |
| ! | GGCTGAATTGCGAGAGCGCA+CGG | + | chr3_3:74339590-74339609 | Msa0471940:CDS | 60.0% |
| AACCCATCCCCCCCAATGCT+TGG | + | chr3_3:74340996-74341015 | Msa0471940:intron | 60.0% | |
| !! | CTTCCAAGCATTGGGGGGGA+TGG | - | chr3_3:74341002-74341021 | None:intergenic | 60.0% |
| ! | ACCAGGTGGAAGGTACGGGT+GGG | - | chr3_3:74341413-74341432 | None:intergenic | 60.0% |
| CAGTATGTGCCTCCTCGCCT+TGG | - | chr3_3:74341821-74341840 | None:intergenic | 60.0% | |
| ! | AGGCGAGGAGGCACATACTG+TGG | + | chr3_3:74341821-74341840 | Msa0471940:CDS | 60.0% |
| !! | CGCAGTTCTCTGAGGCCTTG+AGG | + | chr3_3:74342021-74342040 | Msa0471940:CDS | 60.0% |
| GTGCGCACTATTCCAGCTGC+TGG | + | chr3_3:74342811-74342830 | Msa0471940:CDS | 60.0% | |
| GGCGCTATATTGCGCATGGC+AGG | + | chr3_3:74343177-74343196 | Msa0471940:intron | 60.0% | |
| GAAGCACGCCCCATTGGAGT+CGG | - | chr3_3:74343724-74343743 | None:intergenic | 60.0% | |
| ! | GCGTGCTTCAGTGTTGCTGG+AGG | + | chr3_3:74343735-74343754 | Msa0471940:CDS | 60.0% |
| ! | TCAGGGAAGGTGGAGGGCAT+AGG | + | chr3_3:74344459-74344478 | Msa0471940:intron | 60.0% |
| TAACCTGTGTCGCCAGGTCG+AGG | + | chr3_3:74344483-74344502 | Msa0471940:three_prime_UTR | 60.0% | |
| GAGAACGATCCCCCGCAAAC+AGG | - | chr3_3:74344535-74344554 | None:intergenic | 60.0% | |
| AGTCGACGGTGCCCCAGAAG+GGG | - | chr3_3:74337394-74337413 | None:intergenic | 65.0% | |
| CAGTCGACGGTGCCCCAGAA+GGG | - | chr3_3:74337395-74337414 | None:intergenic | 65.0% | |
| ACAGTCGACGGTGCCCCAGA+AGG | - | chr3_3:74337396-74337415 | None:intergenic | 65.0% | |
| CTGAAGAGCAACGCCGCGAG+CGG | - | chr3_3:74337456-74337475 | None:intergenic | 65.0% | |
| GCAGCAAGGAAGAGAGCCCC+TGG | + | chr3_3:74338363-74338382 | Msa0471940:intron | 65.0% | |
| !! | GGGGGGATGGGTTGCTCACT+TGG | - | chr3_3:74340989-74341008 | None:intergenic | 65.0% |
| ! | CAGGTGGAAGGTACGGGTGG+GGG | - | chr3_3:74341411-74341430 | None:intergenic | 65.0% |
| ! | CCAGGTGGAAGGTACGGGTG+GGG | - | chr3_3:74341412-74341431 | None:intergenic | 65.0% |
| ! | GACCAGGTGGAAGGTACGGG+TGG | - | chr3_3:74341414-74341433 | None:intergenic | 65.0% |
| GCCCCATTGGAGTCGGTCGA+AGG | - | chr3_3:74343717-74343736 | None:intergenic | 65.0% | |
| GGGGCGTGCTTCAGTGTTGC+TGG | + | chr3_3:74343732-74343751 | Msa0471940:CDS | 65.0% | |
| CATCCTCGACCTGGCGACAC+AGG | - | chr3_3:74344489-74344508 | None:intergenic | 65.0% | |
| CTGTGTCGCCAGGTCGAGGA+TGG | + | chr3_3:74344487-74344506 | Msa0471940:three_prime_UTR | 65.0% | |
| GTCGACGGTGCCCCAGAAGG+GGG | - | chr3_3:74337393-74337412 | None:intergenic | 70.0% | |
| AAGAGCAACGCCGCGAGCGG+CGG | - | chr3_3:74337453-74337472 | None:intergenic | 70.0% | |
| CCCCACCCGTACCTTCCACC+TGG | + | chr3_3:74341409-74341428 | Msa0471940:CDS | 70.0% | |
| ! | GCGAGCGGCGGCAGCTGCGG+CGG | - | chr3_3:74337441-74337460 | None:intergenic | 85.0% |
| ! | GCCGCAGCTGCCGCCGCTCG+CGG | + | chr3_3:74337440-74337459 | Msa0471940:CDS | 85.0% |
| ! | GCCGCGAGCGGCGGCAGCTG+CGG | - | chr3_3:74337444-74337463 | None:intergenic | 85.0% |
| ! | GGCGGCAGCTGCGGCGGCCG+TGG | - | chr3_3:74337435-74337454 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 74337224 | 74344780 | 74337224 | ID=Msa0471940;Name=Msa0471940 |
| chr3_3 | mRNA | 74337224 | 74344780 | 74337224 | ID=Msa0471940-mRNA-1;Parent=Msa0471940;Name=Msa0471940-mRNA-1;_AED=0.06;_eAED=0.06;_QI=201|0.93|0.93|1|0.93|0.93|16|317|831 |
| chr3_3 | exon | 74337224 | 74337550 | 74337224 | ID=Msa0471940-mRNA-1:exon:18988;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74338230 | 74338280 | 74338230 | ID=Msa0471940-mRNA-1:exon:18989;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74338367 | 74338597 | 74338367 | ID=Msa0471940-mRNA-1:exon:18990;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74338932 | 74339030 | 74338932 | ID=Msa0471940-mRNA-1:exon:18991;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74339125 | 74339180 | 74339125 | ID=Msa0471940-mRNA-1:exon:18992;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74339271 | 74339382 | 74339271 | ID=Msa0471940-mRNA-1:exon:18993;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74339471 | 74339650 | 74339471 | ID=Msa0471940-mRNA-1:exon:18994;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74339929 | 74340198 | 74339929 | ID=Msa0471940-mRNA-1:exon:18995;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74341361 | 74341573 | 74341361 | ID=Msa0471940-mRNA-1:exon:18996;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74341666 | 74341869 | 74341666 | ID=Msa0471940-mRNA-1:exon:18997;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74341957 | 74342076 | 74341957 | ID=Msa0471940-mRNA-1:exon:18998;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74342526 | 74342855 | 74342526 | ID=Msa0471940-mRNA-1:exon:18999;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74342961 | 74343059 | 74342961 | ID=Msa0471940-mRNA-1:exon:19000;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74343537 | 74343907 | 74343537 | ID=Msa0471940-mRNA-1:exon:19001;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74344034 | 74344066 | 74344034 | ID=Msa0471940-mRNA-1:exon:19002;Parent=Msa0471940-mRNA-1 |
| chr3_3 | exon | 74344463 | 74344780 | 74344463 | ID=Msa0471940-mRNA-1:exon:19003;Parent=Msa0471940-mRNA-1 |
| chr3_3 | five_prime_UTR | 74337224 | 74337424 | 74337224 | ID=Msa0471940-mRNA-1:five_prime_utr;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74337425 | 74337550 | 74337425 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74338230 | 74338280 | 74338230 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74338367 | 74338597 | 74338367 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74338932 | 74339030 | 74338932 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74339125 | 74339180 | 74339125 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74339271 | 74339382 | 74339271 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74339471 | 74339650 | 74339471 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74339929 | 74340198 | 74339929 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74341361 | 74341573 | 74341361 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74341666 | 74341869 | 74341666 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74341957 | 74342076 | 74341957 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74342526 | 74342855 | 74342526 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74342961 | 74343059 | 74342961 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74343537 | 74343907 | 74343537 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74344034 | 74344066 | 74344034 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | CDS | 74344463 | 74344463 | 74344463 | ID=Msa0471940-mRNA-1:cds;Parent=Msa0471940-mRNA-1 |
| chr3_3 | three_prime_UTR | 74344464 | 74344780 | 74344464 | ID=Msa0471940-mRNA-1:three_prime_utr;Parent=Msa0471940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
