AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0079280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0079280 MtrunA17_Chr1g0190281 97.464 631 16 0 1 631 1 631 0.0 1271
Msa0079280 MtrunA17_Chr7g0274521 73.273 666 133 6 1 629 27 684 0.0 942
Msa0079280 MtrunA17_Chr1g0169341 53.956 632 241 13 3 591 5 629 0.0 632
Msa0079280 MtrunA17_Chr2g0288551 46.743 614 267 10 6 609 26 589 3.41e-173 505
Msa0079280 MtrunA17_Chr1g0169571 43.226 620 281 10 3 611 6 565 2.94e-159 469
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0079280 AT3G04470.1 66.456 632 143 12 1 593 1 602 0.0 818
Msa0079280 AT1G04780.1 53.323 647 233 17 3 591 7 642 0.0 639
Msa0079280 AT3G24210.1 53.719 605 240 12 3 589 5 587 0.0 593
Msa0079280 AT1G62050.1 55.891 331 137 3 7 335 18 341 1.19e-117 364
Msa0079280 AT1G62050.1 47.879 165 61 3 441 589 444 599 4.94e-36 144
Msa0079280 AT1G11740.1 56.311 309 128 2 4 312 14 315 8.50e-111 347
Msa0079280 AT1G11740.1 47.590 166 64 3 441 588 365 525 5.53e-36 144

Find 225 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTGATACTTACCGTATT+TGG 0.114269 1_2:+57107566 Msa0079280:CDS
TTATTCCTCCAGACTATAAA+TGG 0.149571 1_2:+57110708 Msa0079280:CDS
AGTGGAAGTTTCGGTGATTT+TGG 0.188869 1_2:-57106906 None:intergenic
TTTCTTCCCATTTGCGATAT+TGG 0.213972 1_2:+57111040 Msa0079280:three_prime_UTR
GGTGGTGACTTCGCCGGGTT+TGG 0.241488 1_2:-57107161 None:intergenic
GTGGTGACTTCGCCGGGTTT+GGG 0.252333 1_2:-57107160 None:intergenic
AGAATTTGAGTTACCTTAAC+AGG 0.258053 1_2:-57108543 None:intergenic
TTCCTATAGTCCCTACTATA+AGG 0.271870 1_2:+57110468 Msa0079280:CDS
TCCATCTCACCGTCCGTCTA+AGG 0.272861 1_2:+57107272 Msa0079280:CDS
CTCTAGCCCTGTCAGCTTCC+AGG 0.283726 1_2:+57110553 Msa0079280:CDS
CATCCTTCTGTTGAATAATA+AGG 0.284963 1_2:-57111002 None:intergenic
TGCAGGACTGTGTTTGTATT+TGG 0.291121 1_2:-57107071 None:intergenic
TGTAGATGTAGATACAAATA+TGG 0.294301 1_2:-57111184 None:intergenic
CTTTCGATTAGTTGGCTACT+TGG 0.311898 1_2:+57111135 Msa0079280:three_prime_UTR
GGAGCAATTCTACCTATAAA+AGG 0.314811 1_2:-57107544 None:intergenic
AGAGTTAGAGTAGGAGAGAT+TGG 0.315376 1_2:-57106821 None:intergenic
TCAAGGAACCTTTCCTGTTA+AGG 0.317238 1_2:+57108530 Msa0079280:CDS
TTTGATTGCACTTGCTCATA+AGG 0.329394 1_2:+57107729 Msa0079280:CDS
GAAGATTCAAACTATCAAAA+TGG 0.330543 1_2:-57111331 None:intergenic
AACGCCGTATGAAGGCAAAA+AGG 0.341141 1_2:+57110750 Msa0079280:CDS
GTGAAATCGAGGCGGGTTCC+TGG 0.346390 1_2:+57107976 Msa0079280:CDS
AAAAGTGTCCAGTAAATTCT+TGG 0.350890 1_2:-57110971 None:intergenic
AGGAGATTGCCACGTGTTAT+AGG 0.351839 1_2:+57107457 Msa0079280:CDS
ATCGACCGCCGCGATGTTCC+CGG 0.354525 1_2:+57107235 Msa0079280:CDS
AATCAGAAGGGTCGGCATCC+TGG 0.360234 1_2:+57110591 Msa0079280:CDS
TATGATAATTGTGAAGTTAA+TGG 0.361275 1_2:+57108171 Msa0079280:CDS
TTTGGGGAGAGTGGGGATGG+TGG 0.362236 1_2:-57107143 None:intergenic
AGACGGAGGTTGTTGGGGAT+TGG 0.364756 1_2:+57107914 Msa0079280:CDS
CGAGACACCACTCACAGAAA+TGG 0.367613 1_2:-57111225 None:intergenic
GAATAACAGAACTCTCAAAA+TGG 0.368703 1_2:-57107522 None:intergenic
AGCTTGTTCCGAATTTGAAT+TGG 0.369704 1_2:+57107878 Msa0079280:CDS
TGGTCTTGCCAAGAATTTAC+TGG 0.370695 1_2:+57110963 Msa0079280:three_prime_UTR
TGATCGCTCAATCTCTGGTT+TGG 0.373736 1_2:-57108237 None:intergenic
AAGAGAAGACGGAGGTTGTT+GGG 0.375539 1_2:+57107908 Msa0079280:CDS
TGCCGACCCTTCTGATTCCT+TGG 0.377043 1_2:-57110585 None:intergenic
TGATCCTCCTTCGGAAAATC+AGG 0.378303 1_2:-57108273 None:intergenic
GAAGGAAATTACGAATGCTT+TGG 0.383221 1_2:+57107753 Msa0079280:CDS
TGACGCCTCCAATTCAAATT+CGG 0.387732 1_2:-57107886 None:intergenic
TCATGATCCAATATCGCAAA+TGG 0.388281 1_2:-57111047 None:intergenic
AGGAAGAGATGGAGTGCATC+AGG 0.389031 1_2:+57110811 Msa0079280:CDS
GTAACAATTACCCTTATAGT+AGG 0.393857 1_2:-57110479 None:intergenic
CGTGCTGATATGACTTTAGC+TGG 0.396670 1_2:+57107607 Msa0079280:CDS
GGTCGGCATCCTGGGTTTCA+TGG 0.404747 1_2:+57110600 Msa0079280:CDS
GTTTGCTAAGATATCAAGTA+AGG 0.405545 1_2:-57108457 None:intergenic
TTTGCTGATCGCTCAATCTC+TGG 0.408381 1_2:-57108242 None:intergenic
AATCTCGGCGGAGAGAGATT+CGG 0.409753 1_2:-57107188 None:intergenic
TTGCACCACGTTTCCAAATA+CGG 0.410330 1_2:-57107579 None:intergenic
CAAACAAGGTGAAGGCTATT+CGG 0.411901 1_2:+57108475 Msa0079280:CDS
AAAGAGAAGAAGGGTTGGTT+TGG 0.413285 1_2:+57108201 Msa0079280:CDS
TATTCACAGTCACAGATATA+AGG 0.414495 1_2:+57110667 Msa0079280:CDS
TTCGCCGGGTTTGGGGAGAG+TGG 0.417314 1_2:-57107152 None:intergenic
AGAAGAAGGGTTGGTTTGGA+TGG 0.419549 1_2:+57108205 Msa0079280:CDS
GCATCCACCCATTTATAGTC+TGG 0.421896 1_2:-57110716 None:intergenic
AGAAAGAAGAGTGGAAGTTT+CGG 0.421968 1_2:-57106915 None:intergenic
GTGTTATAGGTTCCGCTTCG+CGG 0.422474 1_2:+57107470 Msa0079280:CDS
AATCTGAATCTGAAATGAAA+AGG 0.422706 1_2:-57107026 None:intergenic
TGGCAATCTCCTGCACCATT+TGG 0.423961 1_2:-57107446 None:intergenic
ATTTCCCCGTGATCCTCCTT+CGG 0.429547 1_2:-57108282 None:intergenic
GATTCGGTGGTGACTTCGCC+GGG 0.430620 1_2:-57107166 None:intergenic
CAAGAGAAGACGGAGGTTGT+TGG 0.430865 1_2:+57107907 Msa0079280:CDS
GACGAGGAACCTGGAGCAGC+AGG 0.432854 1_2:+57108120 Msa0079280:CDS
AATCCTCCTCCTGCTGCTCC+AGG 0.433201 1_2:-57108129 None:intergenic
AGATACAAATATGGGTATCT+TGG 0.433241 1_2:-57111175 None:intergenic
AACCTCTTGCTTGGTCCAAA+TGG 0.435745 1_2:+57107431 Msa0079280:CDS
TTATGATATGCTCAATGTTA+TGG 0.436490 1_2:+57107948 Msa0079280:CDS
GGCTTTGAGGATGGGGAACT+CGG 0.436643 1_2:+57108083 Msa0079280:CDS
ATGACTTTAGCTGGTTTCGA+TGG 0.437930 1_2:+57107616 Msa0079280:CDS
TATTCTTTACATTTCCTCTC+TGG 0.438337 1_2:-57110906 None:intergenic
CATCAGGGGAGTGATGATTT+CGG 0.442245 1_2:+57110827 Msa0079280:CDS
TCGCCGGGTTTGGGGAGAGT+GGG 0.443416 1_2:-57107151 None:intergenic
TCCTATAGTCCCTACTATAA+GGG 0.445640 1_2:+57110469 Msa0079280:CDS
ATAAGAATCTCGGCGGCGAT+TGG 0.446879 1_2:-57107298 None:intergenic
TGCTGAGGAGAGAGTGCAAT+TGG 0.447314 1_2:+57108056 Msa0079280:CDS
GGTGTGGCCTTTCGATTAGT+TGG 0.449318 1_2:+57111127 Msa0079280:three_prime_UTR
GGGTTTGGGGAGAGTGGGGA+TGG 0.453205 1_2:-57107146 None:intergenic
ATCAGAAGGGTCGGCATCCT+GGG 0.454380 1_2:+57110592 Msa0079280:CDS
GTCTTCAAAACGAACAAGGC+TGG 0.459169 1_2:+57107341 Msa0079280:CDS
GGAGAGAGTGCAATTGGATT+CGG 0.459225 1_2:+57108062 Msa0079280:CDS
TTATGTCCGCCGGCGCCGAT+TGG 0.460473 1_2:+57107317 Msa0079280:CDS
TGCAATTGGATTCGGCTTTG+AGG 0.460887 1_2:+57108070 Msa0079280:CDS
GTTTGTCAAGACGAGGAACC+TGG 0.461453 1_2:+57108111 Msa0079280:CDS
GATATTATCAACCTCTTGCT+TGG 0.461971 1_2:+57107422 Msa0079280:CDS
GGCGGAGGGAGGCGTGGTCG+CGG 0.463424 1_2:-57107111 None:intergenic
GATTTGATCGGCTTGAATCT+CGG 0.465942 1_2:-57107203 None:intergenic
GAGACACCACTCACAGAAAT+GGG 0.466878 1_2:-57111224 None:intergenic
TGGTGGAGATGAGACGGCGG+AGG 0.466931 1_2:-57107126 None:intergenic
TGGTGTGGTTAAAGAGAAGA+AGG 0.467370 1_2:+57108191 Msa0079280:CDS
TGGGTTTCGAATTCAGCGTT+CGG 0.472090 1_2:+57107636 Msa0079280:CDS
TGGATTCGGCTTTGAGGATG+GGG 0.473081 1_2:+57108076 Msa0079280:CDS
ACCCTTATAGTAGGGACTAT+AGG 0.475970 1_2:-57110470 None:intergenic
GGAGAGATTGGATCTAGAAA+AGG 0.479212 1_2:-57106809 None:intergenic
TTGGATTCGGCTTTGAGGAT+GGG 0.482902 1_2:+57108075 Msa0079280:CDS
CATTTCTGTGAGTGGTGTCT+CGG 0.483836 1_2:+57111226 Msa0079280:three_prime_UTR
ATGGAGAGGTGTTTCTCGAC+CGG 0.485743 1_2:-57107254 None:intergenic
TTAGCATCCTGGAAGCTGAC+AGG 0.487103 1_2:-57110560 None:intergenic
TTGTTCCGAATTTGAATTGG+AGG 0.487580 1_2:+57107881 Msa0079280:CDS
GCAGCAGGAGGAGGATTTGA+TGG 0.487668 1_2:+57108135 Msa0079280:CDS
TTCGCAATCTCACTTTCTGT+CGG 0.488279 1_2:-57107793 None:intergenic
ATTGGATTCGGCTTTGAGGA+TGG 0.490095 1_2:+57108074 Msa0079280:CDS
GGATTCGGTGGTGACTTCGC+CGG 0.490138 1_2:-57107167 None:intergenic
ACAAAGAAAAGAAAGAAGAG+TGG 0.492784 1_2:-57106924 None:intergenic
GTTAGAGTTAGAGTTAGAGT+AGG 0.493651 1_2:-57106830 None:intergenic
TGGTGACTTCGCCGGGTTTG+GGG 0.497281 1_2:-57107159 None:intergenic
ACGAATGCTTTGGAAGGTGC+TGG 0.501439 1_2:+57107763 Msa0079280:CDS
CCCTTAGACGGACGGTGAGA+TGG 0.504204 1_2:-57107273 None:intergenic
TTGCTTGGTCCAAATGGTGC+AGG 0.506074 1_2:+57107437 Msa0079280:CDS
CCATCTCACCGTCCGTCTAA+GGG 0.509202 1_2:+57107273 Msa0079280:CDS
TTTAAGACAGCCACGTGTGC+AGG 0.515277 1_2:-57107088 None:intergenic
ATCTGAATCTGAAATGAAAA+GGG 0.516148 1_2:-57107025 None:intergenic
GAACCTGGAGCAGCAGGAGG+AGG 0.516961 1_2:+57108126 Msa0079280:CDS
GCCGAGATTCTTATGTCCGC+CGG 0.518417 1_2:+57107307 Msa0079280:CDS
CGCCGGGTTTGGGGAGAGTG+GGG 0.518655 1_2:-57107150 None:intergenic
TGACTTTAGCTGGTTTCGAT+GGG 0.523491 1_2:+57107617 Msa0079280:CDS
TGGGGATGGTGGAGATGAGA+CGG 0.524520 1_2:-57107132 None:intergenic
TGAGAGGAAACGCCGTATGA+AGG 0.525390 1_2:+57110742 Msa0079280:CDS
TTGAGGATGGGGAACTCGGA+TGG 0.526848 1_2:+57108087 Msa0079280:CDS
CAGACGAATATGTATCGTCC+AGG 0.526894 1_2:+57107835 Msa0079280:CDS
GGAAGAGATGGAGTGCATCA+GGG 0.528462 1_2:+57110812 Msa0079280:CDS
TTGAAGACTCCAATCGGCGC+CGG 0.528698 1_2:-57107326 None:intergenic
GGAGGTTGTTGGGGATTGGA+AGG 0.529410 1_2:+57107918 Msa0079280:CDS
AAGAAACAGACTGTTGCTAA+AGG 0.529478 1_2:+57110791 Msa0079280:CDS
CATGATCCAATATCGCAAAT+GGG 0.530515 1_2:-57111046 None:intergenic
CTGGAGTTCTCTTCAAGAAG+CGG 0.530772 1_2:+57107360 Msa0079280:CDS
ATCCCCACTCTCCCCAAACC+CGG 0.535708 1_2:+57107148 Msa0079280:CDS
ATTCCTTGGATTTAGCATCC+TGG 0.540994 1_2:-57110571 None:intergenic
TTGAGTTACCTTAACAGGAA+AGG 0.542185 1_2:-57108538 None:intergenic
TATTCCTCCAGACTATAAAT+GGG 0.542767 1_2:+57110709 Msa0079280:CDS
CGGTGAGGGTTATGCTTCAG+AGG 0.544886 1_2:+57107678 Msa0079280:CDS
AGAAAAGGACATGAAGGCGG+AGG 0.545010 1_2:-57106794 None:intergenic
TGTTGGGGATTGGAAGGCAA+AGG 0.545472 1_2:+57107924 Msa0079280:CDS
GCCTGAGTAACATCAATCCC+TGG 0.547257 1_2:-57107853 None:intergenic
GAGGGTTATGCTTCAGAGGA+TGG 0.549509 1_2:+57107682 Msa0079280:CDS
AACATCGCGGCGGTCGATGA+CGG 0.550894 1_2:-57107230 None:intergenic
GGTGGAGATGAGACGGCGGA+GGG 0.551483 1_2:-57107125 None:intergenic
GGGGAAATGAAATCAAAGAA+AGG 0.551671 1_2:+57108297 Msa0079280:CDS
TAGTCTGGAGGAATAATGAA+AGG 0.552339 1_2:-57110701 None:intergenic
GGCGGAGAGAGATTCGGATT+CGG 0.554070 1_2:-57107182 None:intergenic
TCCTGGGTTTCATGGATGAA+AGG 0.554595 1_2:+57110608 Msa0079280:CDS
TGGTTAAAGAGAAGAAGGGT+TGG 0.555124 1_2:+57108196 Msa0079280:CDS
TCTTGTGTCAACCACAAGAC+AGG 0.557144 1_2:-57108405 None:intergenic
GGAGATGAGACGGCGGAGGG+AGG 0.557806 1_2:-57107122 None:intergenic
AGAAGCTCATCTGTCTTCAA+AGG 0.559793 1_2:-57108432 None:intergenic
TGATCTCCCATTTCTGTGAG+TGG 0.560675 1_2:+57111218 Msa0079280:three_prime_UTR
GATCCTTATTATTCAACAGA+AGG 0.560738 1_2:+57110999 Msa0079280:three_prime_UTR
ATTTGAGGAGCTTCAGACAC+CGG 0.561298 1_2:+57110511 Msa0079280:CDS
GCCGGCGGACATAAGAATCT+CGG 0.562029 1_2:-57107308 None:intergenic
ACTGTTGCTAAAGGAAGAGA+TGG 0.562544 1_2:+57110800 Msa0079280:CDS
TAACAATTACCCTTATAGTA+GGG 0.564302 1_2:-57110478 None:intergenic
GAAGAGATGGAGTGCATCAG+GGG 0.566509 1_2:+57110813 Msa0079280:CDS
AGTGGAGTTGAAAACTCCTC+CGG 0.566862 1_2:-57110530 None:intergenic
GATTCAGATTCAGATTCAGA+TGG 0.567756 1_2:+57107039 Msa0079280:exon
TCCTTTCATCCATGAAACCC+AGG 0.568104 1_2:-57110609 None:intergenic
GGAGGAGGATTTGATGGTCG+CGG 0.571617 1_2:+57108141 Msa0079280:CDS
ATCCAAGGAATCAGAAGGGT+CGG 0.572870 1_2:+57110583 Msa0079280:CDS
TCCAGGGATTGATGTTACTC+AGG 0.573366 1_2:+57107852 Msa0079280:CDS
AAGACTCCAATCGGCGCCGG+CGG 0.576047 1_2:-57107323 None:intergenic
AGAGAAGACGGAGGTTGTTG+GGG 0.576791 1_2:+57107909 Msa0079280:CDS
TAGCATCCTGGAAGCTGACA+GGG 0.578906 1_2:-57110559 None:intergenic
AGTCTGGAGGAATAATGAAA+GGG 0.582521 1_2:-57110700 None:intergenic
CAAATACGGTAAGTATCAGA+AGG 0.586516 1_2:-57107565 None:intergenic
GTAGATGTAGATACAAATAT+GGG 0.586927 1_2:-57111183 None:intergenic
TGAGACGGCGGAGGGAGGCG+TGG 0.587789 1_2:-57107117 None:intergenic
CGGCGATTGGATCCCTTAGA+CGG 0.588807 1_2:-57107285 None:intergenic
TGCACTTGCTCATAAGGAGA+AGG 0.590604 1_2:+57107735 Msa0079280:CDS
CACCATTTGGACCAAGCAAG+AGG 0.590797 1_2:-57107433 None:intergenic
GCTAAATCCAAGGAATCAGA+AGG 0.590935 1_2:+57110578 Msa0079280:CDS
TTGGAGGCGTCAAGAGAAGA+CGG 0.597089 1_2:+57107897 Msa0079280:CDS
AAGCTGACAGGGCTAGAGAG+TGG 0.597907 1_2:-57110548 None:intergenic
GAAATTACGAATGCTTTGGA+AGG 0.598265 1_2:+57107757 Msa0079280:CDS
AATGAAATCAAAGAAAGGAA+AGG 0.599864 1_2:+57108302 Msa0079280:CDS
GGTGAGTGTGAAATCGAGGC+GGG 0.600152 1_2:+57107969 Msa0079280:CDS
GAGGAACCTGGAGCAGCAGG+AGG 0.600260 1_2:+57108123 Msa0079280:CDS
CTTCCAGGATGCTAAATCCA+AGG 0.600724 1_2:+57110568 Msa0079280:CDS
CAAACACAGTCCTGCACACG+TGG 0.602893 1_2:+57107078 Msa0079280:CDS
TGGAGAGGTGTTTCTCGACC+GGG 0.603007 1_2:-57107253 None:intergenic
GGATCTAGAAAAGGACATGA+AGG 0.603453 1_2:-57106800 None:intergenic
TGTATCTACATCTACATCGA+TGG 0.604588 1_2:+57111191 Msa0079280:three_prime_UTR
CAAGTAGCCAACTAATCGAA+AGG 0.604874 1_2:-57111134 None:intergenic
AGACGGACGGTGAGATGGAG+AGG 0.606515 1_2:-57107268 None:intergenic
TTTGCTAAGATATCAAGTAA+GGG 0.608599 1_2:-57108456 None:intergenic
GATGACGGAGGAGATTTGAT+CGG 0.609059 1_2:-57107215 None:intergenic
GAATTATACCACTAGTATTG+TGG 0.610492 1_2:+57110851 Msa0079280:exon
AGACGAATATGTATCGTCCA+GGG 0.610720 1_2:+57107836 Msa0079280:CDS
AATGGGTGGATGCAAATGAG+AGG 0.613093 1_2:+57110726 Msa0079280:CDS
TCTTCGTCATTCAAAGCACC+AGG 0.618610 1_2:-57107994 None:intergenic
TGGAGTCTTCAAAACGAACA+AGG 0.618942 1_2:+57107337 Msa0079280:CDS
TATCTTAGCAAACAAGGTGA+AGG 0.619308 1_2:+57108467 Msa0079280:CDS
AAAATCACGAATCCGCGAAG+CGG 0.622628 1_2:-57107482 None:intergenic
AAGTGAAAATGAAGAGGGTG+TGG 0.627926 1_2:+57111111 Msa0079280:three_prime_UTR
GGTGTGGTTAAAGAGAAGAA+GGG 0.630158 1_2:+57108192 Msa0079280:CDS
TGGTGCTTTGAATGACGAAG+AGG 0.631423 1_2:+57107996 Msa0079280:CDS
TCCTCCAGACTATAAATGGG+TGG 0.632773 1_2:+57110712 Msa0079280:CDS
CAAATATACCACAATACTAG+TGG 0.634714 1_2:-57110859 None:intergenic
GAAAAGGACATGAAGGCGGA+GGG 0.635578 1_2:-57106793 None:intergenic
TCCACCCATTTATAGTCTGG+AGG 0.642823 1_2:-57110713 None:intergenic
ACTTACCGTATTTGGAAACG+TGG 0.650073 1_2:+57107574 Msa0079280:CDS
CTGACAACTAAACTTCCTCA+AGG 0.651345 1_2:+57108513 Msa0079280:CDS
ATGTGAAGTGAAAATGAAGA+GGG 0.652237 1_2:+57111106 Msa0079280:three_prime_UTR
ATCGCGGCGGTCGATGACGG+AGG 0.652658 1_2:-57107227 None:intergenic
GGAGAGAGATTCGGATTCGG+TGG 0.653850 1_2:-57107179 None:intergenic
ACTTGATATCTTAGCAAACA+AGG 0.654562 1_2:+57108461 Msa0079280:CDS
GGATGGTGGAGATGAGACGG+CGG 0.660026 1_2:-57107129 None:intergenic
TTAACAGGAAAGGTTCCTTG+AGG 0.674558 1_2:-57108528 None:intergenic
TTTGATAATCGTTGCCAGAG+AGG 0.676777 1_2:+57110892 Msa0079280:three_prime_UTR
TCATGGATGAAAGGAAGTCG+TGG 0.678183 1_2:+57110617 Msa0079280:CDS
GATTGGATCCCTTAGACGGA+CGG 0.680680 1_2:-57107281 None:intergenic
TAATTGTGAAGTTAATGGTG+TGG 0.681790 1_2:+57108176 Msa0079280:CDS
TGAGGAGCTTCAGACACCGG+AGG 0.682501 1_2:+57110514 Msa0079280:CDS
AATGTGAAGTGAAAATGAAG+AGG 0.683127 1_2:+57111105 Msa0079280:three_prime_UTR
TGGTGAGTGTGAAATCGAGG+CGG 0.690175 1_2:+57107968 Msa0079280:CDS
GGATGGTGTTTGTCAAGACG+AGG 0.696399 1_2:+57108104 Msa0079280:CDS
TCTAGAAAAGGACATGAAGG+CGG 0.704450 1_2:-57106797 None:intergenic
TGATGATGTGTTGACTGCTG+AGG 0.705268 1_2:+57108041 Msa0079280:CDS
GGCGGACATAAGAATCTCGG+CGG 0.718650 1_2:-57107305 None:intergenic
TTATGGTGAGTGTGAAATCG+AGG 0.719202 1_2:+57107965 Msa0079280:CDS
TTTCTCGACCGGGAACATCG+CGG 0.722361 1_2:-57107243 None:intergenic
CTAAATCCAAGGAATCAGAA+GGG 0.725626 1_2:+57110579 Msa0079280:CDS
AGTGAGAGTGAGTTCAAACG+AGG 0.726522 1_2:+57108375 Msa0079280:CDS
GGTAATGTGACGCTACCACG+TGG 0.732794 1_2:+57107703 Msa0079280:CDS
CTCGACCGGGAACATCGCGG+CGG 0.741851 1_2:-57107240 None:intergenic
TTGATCGGCTTGAATCTCGG+CGG 0.742337 1_2:-57107200 None:intergenic
GAAGCGGAACCTATAACACG+TGG 0.748077 1_2:-57107466 None:intergenic
GAGGTGTAAGACCTGTCTTG+TGG 0.769541 1_2:+57108394 Msa0079280:CDS
GAGGCGTCAAGAGAAGACGG+AGG 0.781427 1_2:+57107900 Msa0079280:CDS
AGTGCAATCAAAGAACCACG+TGG 0.822452 1_2:-57107718 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTTATGTAATTTATATA+TGG - chr1_2:57109274-57109293 None:intergenic 10.0%
!!! ATCATTATTTAAGATATTAA+TGG + chr1_2:57109779-57109798 Msa0079280:intron 10.0%
!!! TTTCTTATTTTTCTTAATTT+TGG - chr1_2:57110777-57110796 None:intergenic 10.0%
!! ATGATTGTTATATCAATTTA+GGG + chr1_2:57108979-57108998 Msa0079280:intron 15.0%
!! ACAGAAAATTGTTAAAAAAA+AGG - chr1_2:57109105-57109124 None:intergenic 15.0%
!! TCTATAATGAAAAATAGAAA+AGG - chr1_2:57110046-57110065 None:intergenic 15.0%
!!! AAAAAATGAAAGTGTAAAGT+TGG - chr1_2:57106961-57106980 None:intergenic 20.0%
!!! TAGTATATAAGATTTTGTAG+TGG - chr1_2:57106995-57107014 None:intergenic 20.0%
!! TATGATAATTGTGAAGTTAA+TGG + chr1_2:57108171-57108190 Msa0079280:CDS 20.0%
!! TTGAAAAAGAAAAAGAAGAA+AGG + chr1_2:57108333-57108352 Msa0079280:CDS 20.0%
!! TGAAAAAGAAAAAGAAGAAA+GGG + chr1_2:57108334-57108353 Msa0079280:CDS 20.0%
!! CTTGTTAGGATATATAATAA+AGG - chr1_2:57108892-57108911 None:intergenic 20.0%
!! GATGATTGTTATATCAATTT+AGG + chr1_2:57108978-57108997 Msa0079280:intron 20.0%
!!! TGTGACATTTTTGTTATAAA+GGG + chr1_2:57109161-57109180 Msa0079280:intron 20.0%
!!! AATTTCATTTTGCATTATTG+AGG - chr1_2:57109240-57109259 None:intergenic 20.0%
!! AATGCAAAATGAAATTACAT+TGG + chr1_2:57109244-57109263 Msa0079280:intron 20.0%
!! TAAGAAATAAAGAACTTTCA+AGG - chr1_2:57109578-57109597 None:intergenic 20.0%
!!! GAAAGTTCTTTATTTCTTAT+TGG + chr1_2:57109579-57109598 Msa0079280:intron 20.0%
!!! AAATATTGATGGTTTTCTAT+GGG + chr1_2:57109707-57109726 Msa0079280:intron 20.0%
!!! GTCACATATTTTAAATAGAA+TGG - chr1_2:57109745-57109764 None:intergenic 20.0%
!!! TCAAATTTTAATCTACAGAA+GGG - chr1_2:57109935-57109954 None:intergenic 20.0%
!!! TTCAAATTTTAATCTACAGA+AGG - chr1_2:57109936-57109955 None:intergenic 20.0%
!!! TATCTCTAAAATGTTCAAAA+AGG - chr1_2:57110214-57110233 None:intergenic 20.0%
!!! TGTTACTTTTACAAAATTTG+AGG + chr1_2:57110496-57110515 Msa0079280:CDS 20.0%
! AAAGTGTAGCTAAAAATGAA+AGG - chr1_2:57106866-57106885 None:intergenic 25.0%
!! ATCTGAATCTGAAATGAAAA+GGG - chr1_2:57107028-57107047 None:intergenic 25.0%
!! AATCTGAATCTGAAATGAAA+AGG - chr1_2:57107029-57107048 None:intergenic 25.0%
!! AGTTCTGTTATTCCTTTTAT+AGG + chr1_2:57107532-57107551 Msa0079280:CDS 25.0%
! TTATGATATGCTCAATGTTA+TGG + chr1_2:57107948-57107967 Msa0079280:CDS 25.0%
! AATGAAATCAAAGAAAGGAA+AGG + chr1_2:57108302-57108321 Msa0079280:CDS 25.0%
! GAAAAAGAAAAAGAAGAAAG+GGG + chr1_2:57108335-57108354 Msa0079280:CDS 25.0%
! TTTGCTAAGATATCAAGTAA+GGG - chr1_2:57108459-57108478 None:intergenic 25.0%
!!! GTTCTTTATTTTACAGCAAT+AGG + chr1_2:57108797-57108816 Msa0079280:intron 25.0%
! ATAATTAGTAGTTAAGAGTG+GGG - chr1_2:57108869-57108888 None:intergenic 25.0%
! GATAATTAGTAGTTAAGAGT+GGG - chr1_2:57108870-57108889 None:intergenic 25.0%
! ATCCTAACAAGATACATTAA+AGG + chr1_2:57108901-57108920 Msa0079280:intron 25.0%
! ATCCTTTAATGTATCTTGTT+AGG - chr1_2:57108906-57108925 None:intergenic 25.0%
!! ATATCAATTTAGGGTTTCTT+TGG + chr1_2:57108988-57109007 Msa0079280:intron 25.0%
!! ATGTCACAGTATTTTCATTA+TGG - chr1_2:57109149-57109168 None:intergenic 25.0%
!!! CTGTGACATTTTTGTTATAA+AGG + chr1_2:57109160-57109179 Msa0079280:intron 25.0%
!!! GTGACATTTTTGTTATAAAG+GGG + chr1_2:57109162-57109181 Msa0079280:intron 25.0%
!! ATGACATTTTGCATTATGAT+GGG - chr1_2:57109300-57109319 None:intergenic 25.0%
!!! AAAATTGGTTTTTCTTTGAC+AGG - chr1_2:57109402-57109421 None:intergenic 25.0%
!! TGTCAAAGAAAAACCAATTT+TGG + chr1_2:57109401-57109420 Msa0079280:intron 25.0%
! TACTACATGAGAATGAAAAT+AGG + chr1_2:57109487-57109506 Msa0079280:intron 25.0%
! AAATAAAGAACTTTCAAGGA+GGG - chr1_2:57109574-57109593 None:intergenic 25.0%
!! GTTCTTTATTTCTTATTGGT+TGG + chr1_2:57109583-57109602 Msa0079280:intron 25.0%
!! TTTATTTCTTATTGGTTGGT+TGG + chr1_2:57109587-57109606 Msa0079280:intron 25.0%
!! TTATTTCTTATTGGTTGGTT+GGG + chr1_2:57109588-57109607 Msa0079280:intron 25.0%
! CATAGAAAACCATCAATATT+TGG - chr1_2:57109708-57109727 None:intergenic 25.0%
!!! CAAATATTGATGGTTTTCTA+TGG + chr1_2:57109706-57109725 Msa0079280:intron 25.0%
!!! AATATTGATGGTTTTCTATG+GGG + chr1_2:57109708-57109727 Msa0079280:intron 25.0%
! AATTAGCACAAAGATTCAAA+GGG - chr1_2:57109821-57109840 None:intergenic 25.0%
!! TAGTTCTTTTACTTGCATTA+TGG + chr1_2:57110161-57110180 Msa0079280:intron 25.0%
! TAACAATTACCCTTATAGTA+GGG - chr1_2:57110481-57110500 None:intergenic 25.0%
! GGAAGAAAAAAAAAACGTAA+AGG - chr1_2:57111028-57111047 None:intergenic 25.0%
! GTAGATGTAGATACAAATAT+GGG - chr1_2:57111186-57111205 None:intergenic 25.0%
! TGTAGATGTAGATACAAATA+TGG - chr1_2:57111187-57111206 None:intergenic 25.0%
!!! TTGTTTTACTCATCAAGTTT+AGG + chr1_2:57111259-57111278 Msa0079280:three_prime_UTR 25.0%
! GAAGATTCAAACTATCAAAA+TGG - chr1_2:57111334-57111353 None:intergenic 25.0%
ACAAAGAAAAGAAAGAAGAG+TGG - chr1_2:57106927-57106946 None:intergenic 30.0%
!! TATAAGATTTTGTAGTGGAG+TGG - chr1_2:57106990-57107009 None:intergenic 30.0%
GAATAACAGAACTCTCAAAA+TGG - chr1_2:57107525-57107544 None:intergenic 30.0%
!!! GATCAGAGTTTTTTGTTTCT+CGG + chr1_2:57107658-57107677 Msa0079280:CDS 30.0%
TAATTGTGAAGTTAATGGTG+TGG + chr1_2:57108176-57108195 Msa0079280:CDS 30.0%
! GTTTGCTAAGATATCAAGTA+AGG - chr1_2:57108460-57108479 None:intergenic 30.0%
ACTTGATATCTTAGCAAACA+AGG + chr1_2:57108461-57108480 Msa0079280:CDS 30.0%
! AGAATTTGAGTTACCTTAAC+AGG - chr1_2:57108546-57108565 None:intergenic 30.0%
TTACAGCTAACTAATCTTGT+CGG - chr1_2:57108650-57108669 None:intergenic 30.0%
ATTCTTTCTTGCTCAAAGAA+AGG - chr1_2:57108717-57108736 None:intergenic 30.0%
TAATTAGTAGTTAAGAGTGG+GGG - chr1_2:57108868-57108887 None:intergenic 30.0%
GGATAATTAGTAGTTAAGAG+TGG - chr1_2:57108871-57108890 None:intergenic 30.0%
! TTTGTTATAAAGGGGAAAAG+AGG + chr1_2:57109170-57109189 Msa0079280:intron 30.0%
TTCTCAAACCAAACAAACTA+AGG + chr1_2:57109212-57109231 Msa0079280:intron 30.0%
! GATGACATTTTGCATTATGA+TGG - chr1_2:57109301-57109320 None:intergenic 30.0%
TCAAACTAGTCCCTAAATTA+AGG + chr1_2:57109349-57109368 Msa0079280:intron 30.0%
ATGCAAAATGTCACCAAAAT+TGG - chr1_2:57109417-57109436 None:intergenic 30.0%
AATAAAGAACTTTCAAGGAG+GGG - chr1_2:57109573-57109592 None:intergenic 30.0%
GAAATAAAGAACTTTCAAGG+AGG - chr1_2:57109575-57109594 None:intergenic 30.0%
TCTTTCTCTATTGTCATAAG+TGG + chr1_2:57109646-57109665 Msa0079280:intron 30.0%
CTTTCTCTATTGTCATAAGT+GGG + chr1_2:57109647-57109666 Msa0079280:intron 30.0%
! ATCAATATTTGGAACTAGAC+TGG - chr1_2:57109697-57109716 None:intergenic 30.0%
! AGTCTAGTTCCAAATATTGA+TGG + chr1_2:57109696-57109715 Msa0079280:intron 30.0%
CAATTAGCACAAAGATTCAA+AGG - chr1_2:57109822-57109841 None:intergenic 30.0%
AAGCGTTATTCAAATTGTAG+CGG + chr1_2:57110018-57110037 Msa0079280:intron 30.0%
! CTTTTACTTGCATTATGGAA+AGG + chr1_2:57110166-57110185 Msa0079280:intron 30.0%
! TAGGATGTATTTTCATATGC+TGG + chr1_2:57110257-57110276 Msa0079280:intron 30.0%
ATGTTGTGTCAGTATTTGTA+TGG + chr1_2:57110391-57110410 Msa0079280:intron 30.0%
GTAACAATTACCCTTATAGT+AGG - chr1_2:57110482-57110501 None:intergenic 30.0%
TATTCACAGTCACAGATATA+AGG + chr1_2:57110667-57110686 Msa0079280:CDS 30.0%
TTATTCCTCCAGACTATAAA+TGG + chr1_2:57110708-57110727 Msa0079280:CDS 30.0%
TATTCCTCCAGACTATAAAT+GGG + chr1_2:57110709-57110728 Msa0079280:CDS 30.0%
GAATTATACCACTAGTATTG+TGG + chr1_2:57110851-57110870 Msa0079280:exon 30.0%
CAAATATACCACAATACTAG+TGG - chr1_2:57110862-57110881 None:intergenic 30.0%
TATTCTTTACATTTCCTCTC+TGG - chr1_2:57110909-57110928 None:intergenic 30.0%
! ACTATACTTTTCACATTGGA+TGG + chr1_2:57110943-57110962 Msa0079280:three_prime_UTR 30.0%
!! AAAAGTGTCCAGTAAATTCT+TGG - chr1_2:57110974-57110993 None:intergenic 30.0%
GATCCTTATTATTCAACAGA+AGG + chr1_2:57110999-57111018 Msa0079280:three_prime_UTR 30.0%
CATCCTTCTGTTGAATAATA+AGG - chr1_2:57111005-57111024 None:intergenic 30.0%
AATGTGAAGTGAAAATGAAG+AGG + chr1_2:57111105-57111124 Msa0079280:three_prime_UTR 30.0%
ATGTGAAGTGAAAATGAAGA+GGG + chr1_2:57111106-57111125 Msa0079280:three_prime_UTR 30.0%
AGATACAAATATGGGTATCT+TGG - chr1_2:57111178-57111197 None:intergenic 30.0%
GTTAGAGTTAGAGTTAGAGT+AGG - chr1_2:57106833-57106852 None:intergenic 35.0%
AGAAAGAAGAGTGGAAGTTT+CGG - chr1_2:57106918-57106937 None:intergenic 35.0%
GATTCAGATTCAGATTCAGA+TGG + chr1_2:57107039-57107058 Msa0079280:exon 35.0%
!!! TTCGTTTTGAAGACTCCAAT+CGG - chr1_2:57107335-57107354 None:intergenic 35.0%
GATATTATCAACCTCTTGCT+TGG + chr1_2:57107422-57107441 Msa0079280:CDS 35.0%
! GCGGATTCGTGATTTTTATA+TGG + chr1_2:57107489-57107508 Msa0079280:CDS 35.0%
GGAGCAATTCTACCTATAAA+AGG - chr1_2:57107547-57107566 None:intergenic 35.0%
CAAATACGGTAAGTATCAGA+AGG - chr1_2:57107568-57107587 None:intergenic 35.0%
CTTCTGATACTTACCGTATT+TGG + chr1_2:57107566-57107585 Msa0079280:CDS 35.0%
!!! AGTTTTTTGTTTCTCGGTGA+GGG + chr1_2:57107664-57107683 Msa0079280:CDS 35.0%
TTTGATTGCACTTGCTCATA+AGG + chr1_2:57107729-57107748 Msa0079280:CDS 35.0%
GAAGGAAATTACGAATGCTT+TGG + chr1_2:57107753-57107772 Msa0079280:CDS 35.0%
! GAAATTACGAATGCTTTGGA+AGG + chr1_2:57107757-57107776 Msa0079280:CDS 35.0%
! AGCTTGTTCCGAATTTGAAT+TGG + chr1_2:57107878-57107897 Msa0079280:CDS 35.0%
TTGTTCCGAATTTGAATTGG+AGG + chr1_2:57107881-57107900 Msa0079280:CDS 35.0%
GGGGAAATGAAATCAAAGAA+AGG + chr1_2:57108297-57108316 Msa0079280:CDS 35.0%
TATCTTAGCAAACAAGGTGA+AGG + chr1_2:57108467-57108486 Msa0079280:CDS 35.0%
TTGAGTTACCTTAACAGGAA+AGG - chr1_2:57108541-57108560 None:intergenic 35.0%
ATGAATGCTGAGTGATCAAA+AGG + chr1_2:57108748-57108767 Msa0079280:intron 35.0%
AATTAGTAGTTAAGAGTGGG+GGG - chr1_2:57108867-57108886 None:intergenic 35.0%
!! TGACCAGAATAATGGACATT+TGG - chr1_2:57108955-57108974 None:intergenic 35.0%
TCATCAGATGACCAGAATAA+TGG - chr1_2:57108963-57108982 None:intergenic 35.0%
!! TTGAGGAACCTTAGTTTGTT+TGG - chr1_2:57109223-57109242 None:intergenic 35.0%
TTAGTCTCAGTCATGCAAAA+TGG + chr1_2:57109324-57109343 Msa0079280:intron 35.0%
GATGACATACATGAATGTAG+AGG - chr1_2:57109380-57109399 None:intergenic 35.0%
ATAAAGAACTTTCAAGGAGG+GGG - chr1_2:57109572-57109591 None:intergenic 35.0%
ACTCATGCACTATCAAAGAA+AGG - chr1_2:57109621-57109640 None:intergenic 35.0%
! AATATTTGGAACTAGACTGG+TGG - chr1_2:57109694-57109713 None:intergenic 35.0%
TTCAAAGGGAGAAACAAACT+AGG - chr1_2:57109807-57109826 None:intergenic 35.0%
GCTACAATTTGAATAACGCT+TGG - chr1_2:57110019-57110038 None:intergenic 35.0%
GTTCAAAAAGGATAAGACAG+CGG - chr1_2:57110202-57110221 None:intergenic 35.0%
CAAACAAGTCAGATGCATAT+AGG + chr1_2:57110238-57110257 Msa0079280:intron 35.0%
!! ACATTTTACAAGAGCACGAT+AGG - chr1_2:57110375-57110394 None:intergenic 35.0%
GTGTCAGTATTTGTATGGTA+CGG + chr1_2:57110396-57110415 Msa0079280:intron 35.0%
TTCCTATAGTCCCTACTATA+AGG + chr1_2:57110468-57110487 Msa0079280:CDS 35.0%
TCCTATAGTCCCTACTATAA+GGG + chr1_2:57110469-57110488 Msa0079280:CDS 35.0%
CTAAATCCAAGGAATCAGAA+GGG + chr1_2:57110579-57110598 Msa0079280:CDS 35.0%
AGTCTGGAGGAATAATGAAA+GGG - chr1_2:57110703-57110722 None:intergenic 35.0%
TAGTCTGGAGGAATAATGAA+AGG - chr1_2:57110704-57110723 None:intergenic 35.0%
AAGAAACAGACTGTTGCTAA+AGG + chr1_2:57110791-57110810 Msa0079280:CDS 35.0%
! GCTGACTATACTTTTCACAT+TGG + chr1_2:57110939-57110958 Msa0079280:three_prime_UTR 35.0%
TTTCTTCCCATTTGCGATAT+TGG + chr1_2:57111040-57111059 Msa0079280:three_prime_UTR 35.0%
CATGATCCAATATCGCAAAT+GGG - chr1_2:57111049-57111068 None:intergenic 35.0%
TCATGATCCAATATCGCAAA+TGG - chr1_2:57111050-57111069 None:intergenic 35.0%
TGTATCTACATCTACATCGA+TGG + chr1_2:57111191-57111210 Msa0079280:three_prime_UTR 35.0%
TCTAGAAAAGGACATGAAGG+CGG - chr1_2:57106800-57106819 None:intergenic 40.0%
GGATCTAGAAAAGGACATGA+AGG - chr1_2:57106803-57106822 None:intergenic 40.0%
GGAGAGATTGGATCTAGAAA+AGG - chr1_2:57106812-57106831 None:intergenic 40.0%
AGAGTTAGAGTAGGAGAGAT+TGG - chr1_2:57106824-57106843 None:intergenic 40.0%
! AGTGGAAGTTTCGGTGATTT+TGG - chr1_2:57106909-57106928 None:intergenic 40.0%
TGCAGGACTGTGTTTGTATT+TGG - chr1_2:57107074-57107093 None:intergenic 40.0%
!! GATTTGATCGGCTTGAATCT+CGG - chr1_2:57107206-57107225 None:intergenic 40.0%
TGGAGTCTTCAAAACGAACA+AGG + chr1_2:57107337-57107356 Msa0079280:CDS 40.0%
ACTTACCGTATTTGGAAACG+TGG + chr1_2:57107574-57107593 Msa0079280:CDS 40.0%
TTGCACCACGTTTCCAAATA+CGG - chr1_2:57107582-57107601 None:intergenic 40.0%
! ATGACTTTAGCTGGTTTCGA+TGG + chr1_2:57107616-57107635 Msa0079280:CDS 40.0%
! TGACTTTAGCTGGTTTCGAT+GGG + chr1_2:57107617-57107636 Msa0079280:CDS 40.0%
!!! GAGTTTTTTGTTTCTCGGTG+AGG + chr1_2:57107663-57107682 Msa0079280:CDS 40.0%
TTCGCAATCTCACTTTCTGT+CGG - chr1_2:57107796-57107815 None:intergenic 40.0%
AGACGAATATGTATCGTCCA+GGG + chr1_2:57107836-57107855 Msa0079280:CDS 40.0%
TGACGCCTCCAATTCAAATT+CGG - chr1_2:57107889-57107908 None:intergenic 40.0%
TTATGGTGAGTGTGAAATCG+AGG + chr1_2:57107965-57107984 Msa0079280:CDS 40.0%
! GACGAAGAGGTTTTTGCAAA+TGG + chr1_2:57108009-57108028 Msa0079280:CDS 40.0%
! AGAGGTTTTTGCAAATGGAG+AGG + chr1_2:57108014-57108033 Msa0079280:CDS 40.0%
TGGTGTGGTTAAAGAGAAGA+AGG + chr1_2:57108191-57108210 Msa0079280:CDS 40.0%
GGTGTGGTTAAAGAGAAGAA+GGG + chr1_2:57108192-57108211 Msa0079280:CDS 40.0%
TGGTTAAAGAGAAGAAGGGT+TGG + chr1_2:57108196-57108215 Msa0079280:CDS 40.0%
!! AAAGAGAAGAAGGGTTGGTT+TGG + chr1_2:57108201-57108220 Msa0079280:CDS 40.0%
AGAAGCTCATCTGTCTTCAA+AGG - chr1_2:57108435-57108454 None:intergenic 40.0%
CAAACAAGGTGAAGGCTATT+CGG + chr1_2:57108475-57108494 Msa0079280:CDS 40.0%
CTGACAACTAAACTTCCTCA+AGG + chr1_2:57108513-57108532 Msa0079280:CDS 40.0%
TTAACAGGAAAGGTTCCTTG+AGG - chr1_2:57108531-57108550 None:intergenic 40.0%
TCAAGGAACCTTTCCTGTTA+AGG + chr1_2:57108530-57108549 Msa0079280:CDS 40.0%
CACTCAGCATTCATCTGTTA+TGG - chr1_2:57108742-57108761 None:intergenic 40.0%
ATTAGTAGTTAAGAGTGGGG+GGG - chr1_2:57108866-57108885 None:intergenic 40.0%
!! CCAGAATAATGGACATTTGG+AGG - chr1_2:57108952-57108971 None:intergenic 40.0%
CCTCCAAATGTCCATTATTC+TGG + chr1_2:57108949-57108968 Msa0079280:intron 40.0%
AGAGGAGGAGCCTTAATTTA+GGG - chr1_2:57109362-57109381 None:intergenic 40.0%
TAGAGGAGGAGCCTTAATTT+AGG - chr1_2:57109363-57109382 None:intergenic 40.0%
GACATACATGAATGTAGAGG+AGG - chr1_2:57109377-57109396 None:intergenic 40.0%
TAAAGAACTTTCAAGGAGGG+GGG - chr1_2:57109571-57109590 None:intergenic 40.0%
AATAACGCTTGGCCAACATA+TGG - chr1_2:57110008-57110027 None:intergenic 40.0%
GTGCTAGAGTTCTCATATGT+AGG - chr1_2:57110076-57110095 None:intergenic 40.0%
! ATTGATGTTTAGAACGCCAC+CGG - chr1_2:57110114-57110133 None:intergenic 40.0%
!! AAGGATAAGACAGCGGATTT+TGG - chr1_2:57110195-57110214 None:intergenic 40.0%
! ATGGTACGGCATTATTTCTC+AGG + chr1_2:57110410-57110429 Msa0079280:intron 40.0%
ACCCTTATAGTAGGGACTAT+AGG - chr1_2:57110473-57110492 None:intergenic 40.0%
ATTCCTTGGATTTAGCATCC+TGG - chr1_2:57110574-57110593 None:intergenic 40.0%
GCTAAATCCAAGGAATCAGA+AGG + chr1_2:57110578-57110597 Msa0079280:CDS 40.0%
ACTGTTGCTAAAGGAAGAGA+TGG + chr1_2:57110800-57110819 Msa0079280:CDS 40.0%
! TTTGATAATCGTTGCCAGAG+AGG + chr1_2:57110892-57110911 Msa0079280:three_prime_UTR 40.0%
! TGGTCTTGCCAAGAATTTAC+TGG + chr1_2:57110963-57110982 Msa0079280:three_prime_UTR 40.0%
AAGTGAAAATGAAGAGGGTG+TGG + chr1_2:57111111-57111130 Msa0079280:three_prime_UTR 40.0%
CAAGTAGCCAACTAATCGAA+AGG - chr1_2:57111137-57111156 None:intergenic 40.0%
! CTTTCGATTAGTTGGCTACT+TGG + chr1_2:57111135-57111154 Msa0079280:three_prime_UTR 40.0%
!! GATGACGGAGGAGATTTGAT+CGG - chr1_2:57107218-57107237 None:intergenic 45.0%
GTCTTCAAAACGAACAAGGC+TGG + chr1_2:57107341-57107360 Msa0079280:CDS 45.0%
CTGGAGTTCTCTTCAAGAAG+CGG + chr1_2:57107360-57107379 Msa0079280:CDS 45.0%
AACCTCTTGCTTGGTCCAAA+TGG + chr1_2:57107431-57107450 Msa0079280:CDS 45.0%
AGGAGATTGCCACGTGTTAT+AGG + chr1_2:57107457-57107476 Msa0079280:CDS 45.0%
AAAATCACGAATCCGCGAAG+CGG - chr1_2:57107485-57107504 None:intergenic 45.0%
! CGTGCTGATATGACTTTAGC+TGG + chr1_2:57107607-57107626 Msa0079280:CDS 45.0%
TGGGTTTCGAATTCAGCGTT+CGG + chr1_2:57107636-57107655 Msa0079280:CDS 45.0%
AGTGCAATCAAAGAACCACG+TGG - chr1_2:57107721-57107740 None:intergenic 45.0%
TGCACTTGCTCATAAGGAGA+AGG + chr1_2:57107735-57107754 Msa0079280:CDS 45.0%
CAGACGAATATGTATCGTCC+AGG + chr1_2:57107835-57107854 Msa0079280:CDS 45.0%
TCCAGGGATTGATGTTACTC+AGG + chr1_2:57107852-57107871 Msa0079280:CDS 45.0%
AAGAGAAGACGGAGGTTGTT+GGG + chr1_2:57107908-57107927 Msa0079280:CDS 45.0%
! TCTTCGTCATTCAAAGCACC+AGG - chr1_2:57107997-57108016 None:intergenic 45.0%
! TGGTGCTTTGAATGACGAAG+AGG + chr1_2:57107996-57108015 Msa0079280:CDS 45.0%
!! TGATGATGTGTTGACTGCTG+AGG + chr1_2:57108041-57108060 Msa0079280:CDS 45.0%
! GGAGAGAGTGCAATTGGATT+CGG + chr1_2:57108062-57108081 Msa0079280:CDS 45.0%
TGCAATTGGATTCGGCTTTG+AGG + chr1_2:57108070-57108089 Msa0079280:CDS 45.0%
!! ATTGGATTCGGCTTTGAGGA+TGG + chr1_2:57108074-57108093 Msa0079280:CDS 45.0%
!! TTGGATTCGGCTTTGAGGAT+GGG + chr1_2:57108075-57108094 Msa0079280:CDS 45.0%
!! AGAAGAAGGGTTGGTTTGGA+TGG + chr1_2:57108205-57108224 Msa0079280:CDS 45.0%
TGATCGCTCAATCTCTGGTT+TGG - chr1_2:57108240-57108259 None:intergenic 45.0%
TTTGCTGATCGCTCAATCTC+TGG - chr1_2:57108245-57108264 None:intergenic 45.0%
TGATCCTCCTTCGGAAAATC+AGG - chr1_2:57108276-57108295 None:intergenic 45.0%
! GATTTTCCGAAGGAGGATCA+CGG + chr1_2:57108276-57108295 Msa0079280:CDS 45.0%
! ATTTTCCGAAGGAGGATCAC+GGG + chr1_2:57108277-57108296 Msa0079280:CDS 45.0%
AGTGAGAGTGAGTTCAAACG+AGG + chr1_2:57108375-57108394 Msa0079280:CDS 45.0%
TCTTGTGTCAACCACAAGAC+AGG - chr1_2:57108408-57108427 None:intergenic 45.0%
GTGCTAATTGAGCACTTGCA+TGG + chr1_2:57109832-57109851 Msa0079280:intron 45.0%
GCCTATACCCAGTACTCTTT+AGG + chr1_2:57109893-57109912 Msa0079280:intron 45.0%
!! GCCTAAAGAGTACTGGGTAT+AGG - chr1_2:57109897-57109916 None:intergenic 45.0%
!! GTGTCAGCCTAAAGAGTACT+GGG - chr1_2:57109903-57109922 None:intergenic 45.0%
! TGTGTCAGCCTAAAGAGTAC+TGG - chr1_2:57109904-57109923 None:intergenic 45.0%
GCAAAGCGACTTCCATATGT+TGG + chr1_2:57109993-57110012 Msa0079280:intron 45.0%
! TTGATGTTTAGAACGCCACC+GGG - chr1_2:57110113-57110132 None:intergenic 45.0%
! CATTATTTCTCAGGCCTCTC+TGG + chr1_2:57110419-57110438 Msa0079280:intron 45.0%
CAGCAATAGCATAACCAGAG+AGG - chr1_2:57110436-57110455 None:intergenic 45.0%
TGGTTATGCTATTGCTGTGC+AGG + chr1_2:57110439-57110458 Msa0079280:intron 45.0%
ATTTGAGGAGCTTCAGACAC+CGG + chr1_2:57110511-57110530 Msa0079280:CDS 45.0%
AGTGGAGTTGAAAACTCCTC+CGG - chr1_2:57110533-57110552 None:intergenic 45.0%
CTTCCAGGATGCTAAATCCA+AGG + chr1_2:57110568-57110587 Msa0079280:CDS 45.0%
ATCCAAGGAATCAGAAGGGT+CGG + chr1_2:57110583-57110602 Msa0079280:CDS 45.0%
TCCTGGGTTTCATGGATGAA+AGG + chr1_2:57110608-57110627 Msa0079280:CDS 45.0%
TCCTTTCATCCATGAAACCC+AGG - chr1_2:57110612-57110631 None:intergenic 45.0%
TCATGGATGAAAGGAAGTCG+TGG + chr1_2:57110617-57110636 Msa0079280:CDS 45.0%
TCCTCCAGACTATAAATGGG+TGG + chr1_2:57110712-57110731 Msa0079280:CDS 45.0%
TCCACCCATTTATAGTCTGG+AGG - chr1_2:57110716-57110735 None:intergenic 45.0%
GCATCCACCCATTTATAGTC+TGG - chr1_2:57110719-57110738 None:intergenic 45.0%
AATGGGTGGATGCAAATGAG+AGG + chr1_2:57110726-57110745 Msa0079280:CDS 45.0%
AACGCCGTATGAAGGCAAAA+AGG + chr1_2:57110750-57110769 Msa0079280:CDS 45.0%
ACGCCGTATGAAGGCAAAAA+GGG + chr1_2:57110751-57110770 Msa0079280:CDS 45.0%
! TGGCCCTTTTTGCCTTCATA+CGG - chr1_2:57110757-57110776 None:intergenic 45.0%
CATCAGGGGAGTGATGATTT+CGG + chr1_2:57110827-57110846 Msa0079280:CDS 45.0%
TGATCTCCCATTTCTGTGAG+TGG + chr1_2:57111218-57111237 Msa0079280:three_prime_UTR 45.0%
GAGACACCACTCACAGAAAT+GGG - chr1_2:57111227-57111246 None:intergenic 45.0%
CATTTCTGTGAGTGGTGTCT+CGG + chr1_2:57111226-57111245 Msa0079280:three_prime_UTR 45.0%
! TTTAAGACAGCCACGTGTGC+AGG - chr1_2:57107091-57107110 None:intergenic 50.0%
AATCTCGGCGGAGAGAGATT+CGG - chr1_2:57107191-57107210 None:intergenic 50.0%
!! TTGATCGGCTTGAATCTCGG+CGG - chr1_2:57107203-57107222 None:intergenic 50.0%
!! ATGGAGAGGTGTTTCTCGAC+CGG - chr1_2:57107257-57107276 None:intergenic 50.0%
GATTGGATCCCTTAGACGGA+CGG - chr1_2:57107284-57107303 None:intergenic 50.0%
ATAAGAATCTCGGCGGCGAT+TGG - chr1_2:57107301-57107320 None:intergenic 50.0%
CACCATTTGGACCAAGCAAG+AGG - chr1_2:57107436-57107455 None:intergenic 50.0%
TTGCTTGGTCCAAATGGTGC+AGG + chr1_2:57107437-57107456 Msa0079280:CDS 50.0%
TGGCAATCTCCTGCACCATT+TGG - chr1_2:57107449-57107468 None:intergenic 50.0%
GAAGCGGAACCTATAACACG+TGG - chr1_2:57107469-57107488 None:intergenic 50.0%
GTGTTATAGGTTCCGCTTCG+CGG + chr1_2:57107470-57107489 Msa0079280:CDS 50.0%
GAGGGTTATGCTTCAGAGGA+TGG + chr1_2:57107682-57107701 Msa0079280:CDS 50.0%
!! ACGAATGCTTTGGAAGGTGC+TGG + chr1_2:57107763-57107782 Msa0079280:CDS 50.0%
GCCTGAGTAACATCAATCCC+TGG - chr1_2:57107856-57107875 None:intergenic 50.0%
!! TTGGAGGCGTCAAGAGAAGA+CGG + chr1_2:57107897-57107916 Msa0079280:CDS 50.0%
CAAGAGAAGACGGAGGTTGT+TGG + chr1_2:57107907-57107926 Msa0079280:CDS 50.0%
AGAGAAGACGGAGGTTGTTG+GGG + chr1_2:57107909-57107928 Msa0079280:CDS 50.0%
TGTTGGGGATTGGAAGGCAA+AGG + chr1_2:57107924-57107943 Msa0079280:CDS 50.0%
TGGTGAGTGTGAAATCGAGG+CGG + chr1_2:57107968-57107987 Msa0079280:CDS 50.0%
! TGCTGAGGAGAGAGTGCAAT+TGG + chr1_2:57108056-57108075 Msa0079280:CDS 50.0%
!! TGGATTCGGCTTTGAGGATG+GGG + chr1_2:57108076-57108095 Msa0079280:CDS 50.0%
GGATGGTGTTTGTCAAGACG+AGG + chr1_2:57108104-57108123 Msa0079280:CDS 50.0%
GTTTGTCAAGACGAGGAACC+TGG + chr1_2:57108111-57108130 Msa0079280:CDS 50.0%
! GCTACAGCCTGATTTTCCGA+AGG + chr1_2:57108266-57108285 Msa0079280:CDS 50.0%
! ACAGCCTGATTTTCCGAAGG+AGG + chr1_2:57108269-57108288 Msa0079280:CDS 50.0%
! TTTTCCGAAGGAGGATCACG+GGG + chr1_2:57108278-57108297 Msa0079280:CDS 50.0%
ATTTCCCCGTGATCCTCCTT+CGG - chr1_2:57108285-57108304 None:intergenic 50.0%
GAGGTGTAAGACCTGTCTTG+TGG + chr1_2:57108394-57108413 Msa0079280:CDS 50.0%
AGTTAAGAGTGGGGGGGATA+AGG - chr1_2:57108860-57108879 None:intergenic 50.0%
!! AGAGTACTGGGTATAGGCCA+GGG - chr1_2:57109891-57109910 None:intergenic 50.0%
!! AAGAGTACTGGGTATAGGCC+AGG - chr1_2:57109892-57109911 None:intergenic 50.0%
GCACTCCAAGAGTAAAGTCC+CGG + chr1_2:57110092-57110111 Msa0079280:intron 50.0%
TAGCATCCTGGAAGCTGACA+GGG - chr1_2:57110562-57110581 None:intergenic 50.0%
TTAGCATCCTGGAAGCTGAC+AGG - chr1_2:57110563-57110582 None:intergenic 50.0%
TGAGAGGAAACGCCGTATGA+AGG + chr1_2:57110742-57110761 Msa0079280:CDS 50.0%
AGGAAGAGATGGAGTGCATC+AGG + chr1_2:57110811-57110830 Msa0079280:CDS 50.0%
GGAAGAGATGGAGTGCATCA+GGG + chr1_2:57110812-57110831 Msa0079280:CDS 50.0%
GAAGAGATGGAGTGCATCAG+GGG + chr1_2:57110813-57110832 Msa0079280:CDS 50.0%
GGTGTGGCCTTTCGATTAGT+TGG + chr1_2:57111127-57111146 Msa0079280:three_prime_UTR 50.0%
CGAGACACCACTCACAGAAA+TGG - chr1_2:57111228-57111247 None:intergenic 50.0%
CAAACACAGTCCTGCACACG+TGG + chr1_2:57107078-57107097 Msa0079280:CDS 55.0%
!! TGGGGATGGTGGAGATGAGA+CGG - chr1_2:57107135-57107154 None:intergenic 55.0%
GGAGAGAGATTCGGATTCGG+TGG - chr1_2:57107182-57107201 None:intergenic 55.0%
GGCGGAGAGAGATTCGGATT+CGG - chr1_2:57107185-57107204 None:intergenic 55.0%
TTTCTCGACCGGGAACATCG+CGG - chr1_2:57107246-57107265 None:intergenic 55.0%
!! TGGAGAGGTGTTTCTCGACC+GGG - chr1_2:57107256-57107275 None:intergenic 55.0%
TCCATCTCACCGTCCGTCTA+AGG + chr1_2:57107272-57107291 Msa0079280:CDS 55.0%
CCATCTCACCGTCCGTCTAA+GGG + chr1_2:57107273-57107292 Msa0079280:CDS 55.0%
CGGCGATTGGATCCCTTAGA+CGG - chr1_2:57107288-57107307 None:intergenic 55.0%
GGCGGACATAAGAATCTCGG+CGG - chr1_2:57107308-57107327 None:intergenic 55.0%
GCCGAGATTCTTATGTCCGC+CGG + chr1_2:57107307-57107326 Msa0079280:CDS 55.0%
GCCGGCGGACATAAGAATCT+CGG - chr1_2:57107311-57107330 None:intergenic 55.0%
TTGAAGACTCCAATCGGCGC+CGG - chr1_2:57107329-57107348 None:intergenic 55.0%
CGGTGAGGGTTATGCTTCAG+AGG + chr1_2:57107678-57107697 Msa0079280:CDS 55.0%
GGTAATGTGACGCTACCACG+TGG + chr1_2:57107703-57107722 Msa0079280:CDS 55.0%
AGACGGAGGTTGTTGGGGAT+TGG + chr1_2:57107914-57107933 Msa0079280:CDS 55.0%
GGAGGTTGTTGGGGATTGGA+AGG + chr1_2:57107918-57107937 Msa0079280:CDS 55.0%
GGTGAGTGTGAAATCGAGGC+GGG + chr1_2:57107969-57107988 Msa0079280:CDS 55.0%
!! GGCTTTGAGGATGGGGAACT+CGG + chr1_2:57108083-57108102 Msa0079280:CDS 55.0%
TTGAGGATGGGGAACTCGGA+TGG + chr1_2:57108087-57108106 Msa0079280:CDS 55.0%
GCAGCAGGAGGAGGATTTGA+TGG + chr1_2:57108135-57108154 Msa0079280:CDS 55.0%
! GGAGGAGGATTTGATGGTCG+CGG + chr1_2:57108141-57108160 Msa0079280:CDS 55.0%
TGAGAAGCTTTCCGAGACCC+TGG + chr1_2:57109871-57109890 Msa0079280:intron 55.0%
CTCCAAGAGTAAAGTCCCGG+TGG + chr1_2:57110095-57110114 Msa0079280:intron 55.0%
AAGCTGACAGGGCTAGAGAG+TGG - chr1_2:57110551-57110570 None:intergenic 55.0%
TGCCGACCCTTCTGATTCCT+TGG - chr1_2:57110588-57110607 None:intergenic 55.0%
AATCAGAAGGGTCGGCATCC+TGG + chr1_2:57110591-57110610 Msa0079280:CDS 55.0%
ATCAGAAGGGTCGGCATCCT+GGG + chr1_2:57110592-57110611 Msa0079280:CDS 55.0%
!! GGATGGTGGAGATGAGACGG+CGG - chr1_2:57107132-57107151 None:intergenic 60.0%
TTTGGGGAGAGTGGGGATGG+TGG - chr1_2:57107146-57107165 None:intergenic 60.0%
ATCCCCACTCTCCCCAAACC+CGG + chr1_2:57107148-57107167 Msa0079280:CDS 60.0%
TGGTGACTTCGCCGGGTTTG+GGG - chr1_2:57107162-57107181 None:intergenic 60.0%
GTGGTGACTTCGCCGGGTTT+GGG - chr1_2:57107163-57107182 None:intergenic 60.0%
!! GATTCGGTGGTGACTTCGCC+GGG - chr1_2:57107169-57107188 None:intergenic 60.0%
!! GGATTCGGTGGTGACTTCGC+CGG - chr1_2:57107170-57107189 None:intergenic 60.0%
AACATCGCGGCGGTCGATGA+CGG - chr1_2:57107233-57107252 None:intergenic 60.0%
AGACGGACGGTGAGATGGAG+AGG - chr1_2:57107271-57107290 None:intergenic 60.0%
CCCTTAGACGGACGGTGAGA+TGG - chr1_2:57107276-57107295 None:intergenic 60.0%
! GAGGCGTCAAGAGAAGACGG+AGG + chr1_2:57107900-57107919 Msa0079280:CDS 60.0%
! GTGAAATCGAGGCGGGTTCC+TGG + chr1_2:57107976-57107995 Msa0079280:CDS 60.0%
AATCCTCCTCCTGCTGCTCC+AGG - chr1_2:57108132-57108151 None:intergenic 60.0%
CAAGGAGGGGGGAGAATGTC+TGG - chr1_2:57109560-57109579 None:intergenic 60.0%
CTGGGTATAGGCCAGGGTCT+CGG - chr1_2:57109885-57109904 None:intergenic 60.0%
CGCCACCGGGACTTTACTCT+TGG - chr1_2:57110100-57110119 None:intergenic 60.0%
TGAGGAGCTTCAGACACCGG+AGG + chr1_2:57110514-57110533 Msa0079280:CDS 60.0%
CTCTAGCCCTGTCAGCTTCC+AGG + chr1_2:57110553-57110572 Msa0079280:CDS 60.0%
GGTCGGCATCCTGGGTTTCA+TGG + chr1_2:57110600-57110619 Msa0079280:CDS 60.0%
GGTGGAGATGAGACGGCGGA+GGG - chr1_2:57107128-57107147 None:intergenic 65.0%
TGGTGGAGATGAGACGGCGG+AGG - chr1_2:57107129-57107148 None:intergenic 65.0%
GGGTTTGGGGAGAGTGGGGA+TGG - chr1_2:57107149-57107168 None:intergenic 65.0%
TCGCCGGGTTTGGGGAGAGT+GGG - chr1_2:57107154-57107173 None:intergenic 65.0%
TTCGCCGGGTTTGGGGAGAG+TGG - chr1_2:57107155-57107174 None:intergenic 65.0%
GGTGGTGACTTCGCCGGGTT+TGG - chr1_2:57107164-57107183 None:intergenic 65.0%
ATCGACCGCCGCGATGTTCC+CGG + chr1_2:57107235-57107254 Msa0079280:CDS 65.0%
!! TTATGTCCGCCGGCGCCGAT+TGG + chr1_2:57107317-57107336 Msa0079280:CDS 65.0%
! AAGACTCCAATCGGCGCCGG+CGG - chr1_2:57107326-57107345 None:intergenic 65.0%
GACGAGGAACCTGGAGCAGC+AGG + chr1_2:57108120-57108139 Msa0079280:CDS 65.0%
GAGGAACCTGGAGCAGCAGG+AGG + chr1_2:57108123-57108142 Msa0079280:CDS 65.0%
GAACCTGGAGCAGCAGGAGG+AGG + chr1_2:57108126-57108145 Msa0079280:CDS 65.0%
GGAGATGAGACGGCGGAGGG+AGG - chr1_2:57107125-57107144 None:intergenic 70.0%
CGCCGGGTTTGGGGAGAGTG+GGG - chr1_2:57107153-57107172 None:intergenic 70.0%
! ATCGCGGCGGTCGATGACGG+AGG - chr1_2:57107230-57107249 None:intergenic 70.0%
CTCGACCGGGAACATCGCGG+CGG - chr1_2:57107243-57107262 None:intergenic 70.0%
TGAGACGGCGGAGGGAGGCG+TGG - chr1_2:57107120-57107139 None:intergenic 75.0%
!! GGCGGAGGGAGGCGTGGTCG+CGG - chr1_2:57107114-57107133 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 57106795 57111379 57106795 ID=Msa0079280;Name=Msa0079280
chr1_2 mRNA 57106795 57111379 57106795 ID=Msa0079280-mRNA-1;Parent=Msa0079280;Name=Msa0079280-mRNA-1;_AED=0.02;_eAED=0.02;_QI=263|1|1|1|1|1|2|514|632
chr1_2 exon 57106795 57108551 57106795 ID=Msa0079280-mRNA-1:exon:17996;Parent=Msa0079280-mRNA-1
chr1_2 exon 57110461 57111379 57110461 ID=Msa0079280-mRNA-1:exon:17997;Parent=Msa0079280-mRNA-1
chr1_2 five_prime_UTR 57106795 57107057 57106795 ID=Msa0079280-mRNA-1:five_prime_utr;Parent=Msa0079280-mRNA-1
chr1_2 CDS 57107058 57108551 57107058 ID=Msa0079280-mRNA-1:cds;Parent=Msa0079280-mRNA-1
chr1_2 CDS 57110461 57110865 57110461 ID=Msa0079280-mRNA-1:cds;Parent=Msa0079280-mRNA-1
chr1_2 three_prime_UTR 57110866 57111379 57110866 ID=Msa0079280-mRNA-1:three_prime_utr;Parent=Msa0079280-mRNA-1
Gene Sequence

>Msa0079280

ATGGAAGATATATCCAAATACAAACACAGTCCTGCACACGTGGCTGTCTTAAACCGCGACCACGCCTCCCTCCGCCGTCTCATCTCCACCATCCCCACTCTCCCCAAACCCGGCGAAGTCACCACCGAATCCGAATCTCTCTCCGCCGAGATTCAAGCCGATCAAATCTCCTCCGTCATCGACCGCCGCGATGTTCCCGGTCGAGAAACACCTCTCCATCTCACCGTCCGTCTAAGGGATCCAATCGCCGCCGAGATTCTTATGTCCGCCGGCGCCGATTGGAGTCTTCAAAACGAACAAGGCTGGAGTTCTCTTCAAGAAGCGGTTTGCAATCGAGAAGAATCAATCGCGCTTGTTATCGCGCGATATTATCAACCTCTTGCTTGGTCCAAATGGTGCAGGAGATTGCCACGTGTTATAGGTTCCGCTTCGCGGATTCGTGATTTTTATATGGAGATTTCTTTCCATTTTGAGAGTTCTGTTATTCCTTTTATAGGTAGAATTGCTCCTTCTGATACTTACCGTATTTGGAAACGTGGTGCAAATCTTCGTGCTGATATGACTTTAGCTGGTTTCGATGGGTTTCGAATTCAGCGTTCGGATCAGAGTTTTTTGTTTCTCGGTGAGGGTTATGCTTCAGAGGATGGTAATGTGACGCTACCACGTGGTTCTTTGATTGCACTTGCTCATAAGGAGAAGGAAATTACGAATGCTTTGGAAGGTGCTGGTACACAGCCGACAGAAAGTGAGATTGCGAATGAAGTTTCGATGATGTTTCAGACGAATATGTATCGTCCAGGGATTGATGTTACTCAGGCTGAGCTTGTTCCGAATTTGAATTGGAGGCGTCAAGAGAAGACGGAGGTTGTTGGGGATTGGAAGGCAAAGGTTTATGATATGCTCAATGTTATGGTGAGTGTGAAATCGAGGCGGGTTCCTGGTGCTTTGAATGACGAAGAGGTTTTTGCAAATGGAGAGGATTATGATGATGTGTTGACTGCTGAGGAGAGAGTGCAATTGGATTCGGCTTTGAGGATGGGGAACTCGGATGGTGTTTGTCAAGACGAGGAACCTGGAGCAGCAGGAGGAGGATTTGATGGTCGCGGAATTGTGTATGATAATTGTGAAGTTAATGGTGTGGTTAAAGAGAAGAAGGGTTGGTTTGGATGGAATAAGAATCCAAACCAGAGATTGAGCGATCAGCAAAAGCTACAGCCTGATTTTCCGAAGGAGGATCACGGGGAAATGAAATCAAAGAAAGGAAAGGATCAAAACTTGAAAAAGAAAAAGAAGAAAGGGGCGAGTAACGAGTCTAAAAGTGAGAGTGAGTTCAAACGAGGTGTAAGACCTGTCTTGTGGTTGACACAAGACTTTCCTTTGAAGACAGATGAGCTTCTGCCCTTACTTGATATCTTAGCAAACAAGGTGAAGGCTATTCGGAGACTCAGAGAACTTCTGACAACTAAACTTCCTCAAGGAACCTTTCCTGTTAAGGTAGCTATTCCTATAGTCCCTACTATAAGGGTAATTGTTACTTTTACAAAATTTGAGGAGCTTCAGACACCGGAGGAGTTTTCAACTCCACTCTCTAGCCCTGTCAGCTTCCAGGATGCTAAATCCAAGGAATCAGAAGGGTCGGCATCCTGGGTTTCATGGATGAAAGGAAGTCGTGGTATGCTATCTAGTGACTCTGATAGTCATATTCACAGTCACAGATATAAGGATGAAGTAGACCCTTTCATTATTCCTCCAGACTATAAATGGGTGGATGCAAATGAGAGGAAACGCCGTATGAAGGCAAAAAGGGCCAAAATTAAGAAAAATAAGAAACAGACTGTTGCTAAAGGAAGAGATGGAGTGCATCAGGGGAGTGATGATTTCGGAGAATTATACCACTAG
Protein sequence

>Msa0079280

MEDISKYKHSPAHVAVLNRDHASLRRLISTIPTLPKPGEVTTESESLSAEIQADQISSVIDRRDVPGRETPLHLTVRLRDPIAAEILMSAGADWSLQNEQGWSSLQEAVCNREESIALVIARYYQPLAWSKWCRRLPRVIGSASRIRDFYMEISFHFESSVIPFIGRIAPSDTYRIWKRGANLRADMTLAGFDGFRIQRSDQSFLFLGEGYASEDGNVTLPRGSLIALAHKEKEITNALEGAGTQPTESEIANEVSMMFQTNMYRPGIDVTQAELVPNLNWRRQEKTEVVGDWKAKVYDMLNVMVSVKSRRVPGALNDEEVFANGEDYDDVLTAEERVQLDSALRMGNSDGVCQDEEPGAAGGGFDGRGIVYDNCEVNGVVKEKKGWFGWNKNPNQRLSDQQKLQPDFPKEDHGEMKSKKGKDQNLKKKKKKGASNESKSESEFKRGVRPVLWLTQDFPLKTDELLPLLDILANKVKAIRRLRELLTTKLPQGTFPVKVAIPIVPTIRVIVTFTKFEELQTPEEFSTPLSSPVSFQDAKSKESEGSASWVSWMKGSRGMLSSDSDSHIHSHRYKDEVDPFIIPPDYKWVDANERKRRMKAKRAKIKKNKKQTVAKGRDGVHQGSDDFGELYH*