AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0474990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0474990 MtrunA17_Chr3g0132061 91.901 284 18 2 34 317 24 302 2.92e-115 335
Msa0474990 MtrunA17_Chr3g0132051 65.614 285 57 3 33 317 23 266 1.70e-96 286
Msa0474990 MtrunA17_Chr8g0386231 53.177 299 89 8 43 317 50 321 2.90e-78 241
Msa0474990 MtrunA17_Chr4g0001151 87.413 143 14 1 34 176 158 296 3.32e-60 195
Msa0474990 MtrunA17_Chr2g0290471 47.826 276 104 6 43 317 33 269 1.17e-47 161
Msa0474990 MtrunA17_Chr3g0128091 35.484 310 163 7 15 316 3 283 4.24e-38 136
Msa0474990 MtrunA17_Chr3g0094841 32.967 273 119 8 46 317 28 237 5.29e-32 119
Msa0474990 MtrunA17_Chr5g0429111 37.654 162 88 3 47 206 56 206 5.84e-28 110
Msa0474990 MtrunA17_Chr4g0028461 29.720 286 156 8 47 317 69 324 3.42e-26 105
Msa0474990 MtrunA17_Chr1g0180631 31.897 348 170 9 20 317 3 333 1.32e-25 104
Msa0474990 MtrunA17_Chr2g0327311 32.716 162 104 1 43 199 64 225 1.08e-22 96.7
Msa0474990 MtrunA17_Chr7g0264601 26.765 340 176 7 46 317 15 349 7.36e-21 91.7
Msa0474990 MtrunA17_Chr8g0343041 46.774 62 33 0 145 206 77 138 3.85e-12 65.9
Msa0474990 MtrunA17_Chr6g0454851 49.254 67 33 1 43 109 17 82 8.85e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0474990 AT5G50740.5 46.739 276 122 4 46 317 29 283 5.62e-71 222
Msa0474990 AT5G50740.1 46.739 276 122 4 46 317 29 283 5.62e-71 222
Msa0474990 AT5G50740.3 46.739 276 122 4 46 317 36 290 9.52e-71 221
Msa0474990 AT5G63530.2 68.902 164 50 1 45 207 59 222 1.58e-61 199
Msa0474990 AT5G63530.1 68.902 164 50 1 45 207 74 237 2.00e-61 199
Msa0474990 AT5G50740.2 58.197 122 51 0 46 167 29 150 1.05e-42 145
Msa0474990 AT5G50740.4 58.197 122 51 0 46 167 36 157 2.11e-42 144
Msa0474990 AT3G02960.1 30.915 317 148 6 1 317 1 246 7.26e-42 145
Msa0474990 AT5G24580.2 31.650 297 141 6 46 316 57 317 2.11e-34 128
Msa0474990 AT5G24580.4 31.650 297 141 6 46 316 58 318 2.42e-34 128
Msa0474990 AT5G24580.1 31.650 297 141 6 46 316 58 318 2.42e-34 128
Msa0474990 AT5G24580.3 30.640 297 141 7 46 316 58 315 6.68e-31 119
Msa0474990 AT2G36950.1 31.657 338 162 11 46 317 52 386 2.17e-28 113
Msa0474990 AT5G03380.1 28.030 396 181 12 20 317 3 392 8.02e-26 106
Msa0474990 AT5G24580.5 30.451 266 123 6 77 316 2 231 1.17e-24 100
Msa0474990 AT5G03380.2 27.989 368 164 11 48 317 1 365 1.86e-24 102
Msa0474990 AT1G29000.1 33.750 160 103 2 49 206 20 178 1.53e-21 92.8
Msa0474990 AT1G29000.2 33.750 160 103 2 49 206 20 178 1.53e-21 92.8
Msa0474990 AT5G60800.1 29.310 174 110 3 42 204 24 195 1.53e-13 70.1
Msa0474990 AT5G60800.2 29.310 174 110 3 42 204 24 195 2.52e-13 69.7

Find 88 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAATGCATGTGAACTTTA+AGG 0.123803 3_3:+78043993 None:intergenic
TATGCAGGATATCCAATTTC+TGG 0.228734 3_3:+78042937 None:intergenic
AGCAGAGCCATTGAAGGTTT+TGG 0.240236 3_3:-78044266 Msa0474990:CDS
TCTTCTTTCTTCTCCTCTTC+AGG 0.262478 3_3:+78044145 None:intergenic
TTGTATGCATACCCAGAAAT+TGG 0.264045 3_3:-78042949 Msa0474990:CDS
CACATGACGCTGCATGCATT+TGG 0.299690 3_3:+78042838 None:intergenic
CAAAGATTGTATTGGAAATC+TGG 0.308215 3_3:-78042791 Msa0474990:three_prime_UTR
TACTCTGCTGCTGAGATTAC+AGG 0.320470 3_3:+78044694 None:intergenic
GAATATGTGTACAAGAGAAT+TGG 0.337745 3_3:-78043192 Msa0474990:CDS
GGCGCCGGTGGCGGTGGTGG+AGG 0.378419 3_3:+78042883 None:intergenic
GAGTTCAGAAGAAGAGTCAT+AGG 0.384792 3_3:-78044240 Msa0474990:CDS
TGTGGCGCCGGTGGCGGTGG+TGG 0.385547 3_3:+78042880 None:intergenic
ACATGACGCTGCATGCATTT+GGG 0.387825 3_3:+78042839 None:intergenic
AGAAACATCAAAGATTGTAT+TGG 0.390022 3_3:-78042799 Msa0474990:three_prime_UTR
ACATATTCAACCAGCATTGT+TGG 0.400300 3_3:+78043207 None:intergenic
AATATGTGTACAAGAGAATT+GGG 0.410323 3_3:-78043191 Msa0474990:CDS
ATTTGTGGCGCCGGTGGCGG+TGG 0.411514 3_3:+78042877 None:intergenic
TTTCTCCTCTTCTTGTCGCT+TGG 0.420884 3_3:+78043050 None:intergenic
TTGACTCGCAGGAGTGGAAT+TGG 0.430688 3_3:-78043280 Msa0474990:intron
ATCTCTGCCGGAGGCGGTGG+AGG 0.439963 3_3:+78044418 None:intergenic
GCGCCGGTGGCGGTGGTGGA+GGG 0.441430 3_3:+78042884 None:intergenic
TTTCCTCCTCAGGAGCAGTT+GGG 0.442294 3_3:+78044194 None:intergenic
TTCTCATCACTGAACATTTG+TGG 0.463049 3_3:+78042862 None:intergenic
AACAGATTGCAAATCTCATA+TGG 0.468470 3_3:-78044308 Msa0474990:CDS
GAAAGAAGAAGGAGAGGGTG+AGG 0.470465 3_3:-78043073 Msa0474990:CDS
GAAGGAAGAGAAAGTGGAGG+AGG 0.477809 3_3:-78043151 Msa0474990:CDS
AACATTTGTGGCGCCGGTGG+CGG 0.479452 3_3:+78042874 None:intergenic
ATAATCTCTGCCGGAGGCGG+TGG 0.484381 3_3:+78044415 None:intergenic
TGAGCATGATAGTAAGCAGC+TGG 0.486591 3_3:+78042913 None:intergenic
AGCATAATCTCTGCCGGAGG+CGG 0.487601 3_3:+78044412 None:intergenic
TGATGTTCCTCCACCGCCTC+CGG 0.487719 3_3:-78044425 Msa0474990:CDS
ACTCTCTCCAAAACCTTCAA+TGG 0.491679 3_3:+78044259 None:intergenic
TGTATACTTTCTGTTGAAGT+GGG 0.491737 3_3:-78042654 Msa0474990:three_prime_UTR
AGAGAAAGCAGAGCCATTGA+AGG 0.492377 3_3:-78044272 Msa0474990:CDS
AGAGGAGAAAGTTGAAGAAG+TGG 0.492702 3_3:-78043103 Msa0474990:CDS
AGAAGAGACAAATGTGGAAG+AGG 0.493464 3_3:-78043013 Msa0474990:CDS
TAGTAAGCAGCTGGGTATGC+AGG 0.497299 3_3:+78042922 None:intergenic
ATGCAGGATATCCAATTTCT+GGG 0.498068 3_3:+78042938 None:intergenic
TCTTTCAATACCTCTCCCAT+TGG 0.498383 3_3:+78044664 None:intergenic
GATCATGAAGGAAGAGAAAG+TGG 0.506766 3_3:-78043157 Msa0474990:CDS
TGAGGCCAAGCGACAAGAAG+AGG 0.518325 3_3:-78043055 Msa0474990:CDS
AACTCTGAGGTAAGTGTGAA+GGG 0.521530 3_3:-78043240 Msa0474990:CDS
GCAGAGTAACTAACACCAAT+GGG 0.522167 3_3:-78044679 Msa0474990:exon
TTGTATACTTTCTGTTGAAG+TGG 0.524186 3_3:-78042655 Msa0474990:three_prime_UTR
CTGAACATTTGTGGCGCCGG+TGG 0.526503 3_3:+78042871 None:intergenic
TCCTCAGGAGCAGTTGGGAT+CGG 0.529318 3_3:+78044199 None:intergenic
GTGGCTGAGAAGAAAGAAGA+AGG 0.533064 3_3:-78043084 Msa0474990:CDS
ATACCCTCCACCACCGCCAC+CGG 0.533504 3_3:-78042887 Msa0474990:CDS
TGAGAAGAAAGAAGAAGGAG+AGG 0.544036 3_3:-78043079 Msa0474990:CDS
TCTCATATGGTGGTTGTGAA+AGG 0.544258 3_3:-78044295 Msa0474990:CDS
TCCGATCCCAACTGCTCCTG+AGG 0.547732 3_3:-78044200 Msa0474990:CDS
ACTTTCAGCATAATCTCTGC+CGG 0.558570 3_3:+78044406 None:intergenic
TCACTGAACATTTGTGGCGC+CGG 0.561801 3_3:+78042868 None:intergenic
TGGGTATGCATACAAATCCA+TGG 0.565942 3_3:+78042957 None:intergenic
AAAAGTTGCTGAGGAAGAGA+AGG 0.566341 3_3:-78044173 Msa0474990:CDS
AGCAGAGTAACTAACACCAA+TGG 0.570486 3_3:-78044680 Msa0474990:exon
GAACTCTGAGGTAAGTGTGA+AGG 0.574142 3_3:-78043241 Msa0474990:CDS
CTTAGAGTATACTCTACAGA+TGG 0.575115 3_3:-78042705 Msa0474990:three_prime_UTR
CATGCATTGTGAAGCTTGTG+CGG 0.582190 3_3:-78043981 Msa0474990:CDS
ACTCGCAGGAGTGGAATTGG+TGG 0.583118 3_3:-78043277 Msa0474990:intron
AGAGAAGGCTGCACCTGAAG+AGG 0.583611 3_3:-78044158 Msa0474990:CDS
TATGCATACAAATCCATGGA+TGG 0.594682 3_3:+78042961 None:intergenic
TGCATTGTGAAAGCTGTGCT+CGG 0.595120 3_3:-78044378 Msa0474990:CDS
ATACTACTATAATCCATCCA+TGG 0.596587 3_3:-78042974 Msa0474990:CDS
GGAAGAAGAAACCAAGCCAG+AGG 0.600837 3_3:-78044464 Msa0474990:CDS
TTAGGAAGAGAAGAAAACAG+AGG 0.601871 3_3:-78044527 Msa0474990:intron
GAGAAGAAAGAAGAAGGAGA+GGG 0.602889 3_3:-78043078 Msa0474990:CDS
GTTATCACATCTTCAACACC+TGG 0.604591 3_3:+78044328 None:intergenic
CTCTGAGGTAAGTGTGAAGG+GGG 0.606360 3_3:-78043238 Msa0474990:CDS
GATCCCAACTGCTCCTGAGG+AGG 0.607543 3_3:-78044197 Msa0474990:CDS
GTAACTAACACCAATGGGAG+AGG 0.610489 3_3:-78044674 Msa0474990:intron
CATGAAGGAAGAGAAAGTGG+AGG 0.610980 3_3:-78043154 Msa0474990:CDS
AGAGGAAAGTAAGACAGAGG+AGG 0.613057 3_3:-78044509 Msa0474990:CDS
TCAGAAGAAGAGTCATAGGA+AGG 0.616480 3_3:-78044236 Msa0474990:CDS
GGTGTATGATCCAACAATGC+TGG 0.619988 3_3:-78043217 Msa0474990:CDS
TGAAGAGGAGAAGAAAGAAG+AGG 0.625518 3_3:-78044143 Msa0474990:intron
AGGACAACAATCACAATCTG+AGG 0.626532 3_3:+78044013 None:intergenic
AACAGAGGAAAGTAAGACAG+AGG 0.628055 3_3:-78044512 Msa0474990:CDS
GGAGGAGGAAGCCAAAGCCG+AGG 0.633720 3_3:-78043136 Msa0474990:CDS
GAAGCATGCAGTGATCATGA+AGG 0.653325 3_3:-78043169 Msa0474990:CDS
TACTGTAGAAGAGACAAATG+TGG 0.655441 3_3:-78043019 Msa0474990:CDS
GCTGTGCTCGGAAAGTTCGT+CGG 0.656979 3_3:-78044366 Msa0474990:CDS
GAGCATGATAGTAAGCAGCT+GGG 0.661089 3_3:+78042914 None:intergenic
ACTCTGAGGTAAGTGTGAAG+GGG 0.663378 3_3:-78043239 Msa0474990:CDS
TTCAGCATAATCTCTGCCGG+AGG 0.675417 3_3:+78044409 None:intergenic
AGATTGCAAATCTCATATGG+TGG 0.675547 3_3:-78044305 Msa0474990:CDS
AACTGATCTGAAGAACTCTG+AGG 0.714880 3_3:-78043253 Msa0474990:CDS
GCATTGTGAAGCTTGTGCGG+AGG 0.759739 3_3:-78043978 Msa0474990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAATTTCATTTATCTA+TGG - chr3_3:78042808-78042827 Msa0474990:three_prime_UTR 10.0%
!!! TTTTTTTTTTTTACTATAGT+AGG - chr3_3:78043698-78043717 Msa0474990:intron 10.0%
!!! AATTTAATTTCATTTATCTA+TGG - chr3_3:78042808-78042827 Msa0474990:three_prime_UTR 10.0%
!!! TTTTTTTTTTTTACTATAGT+AGG - chr3_3:78043698-78043717 Msa0474990:intron 10.0%
!! ATAAAAGAGAAGTTAAATAT+TGG + chr3_3:78043479-78043498 None:intergenic 15.0%
!!! ATTGTATAATCTTATTTAGT+AGG - chr3_3:78044031-78044050 Msa0474990:intron 15.0%
!! ATAAAAGAGAAGTTAAATAT+TGG + chr3_3:78043479-78043498 None:intergenic 15.0%
!!! ATTGTATAATCTTATTTAGT+AGG - chr3_3:78044031-78044050 Msa0474990:intron 15.0%
!!! CTTTTATTTACAAAATCAGA+TGG - chr3_3:78043492-78043511 Msa0474990:intron 20.0%
!! ACTTAACTAACAAATTCAAT+TGG - chr3_3:78043556-78043575 Msa0474990:intron 20.0%
!! ACAAATTCAATTGGTTAATT+TGG - chr3_3:78043565-78043584 Msa0474990:intron 20.0%
!! ATGGTTAAATCAATTTAATC+CGG + chr3_3:78043618-78043637 None:intergenic 20.0%
!!! ATTGACTTACAAAGAAAAAA+CGG + chr3_3:78043652-78043671 None:intergenic 20.0%
!! AATTATGTGATTTAATTGAC+CGG - chr3_3:78043826-78043845 Msa0474990:intron 20.0%
!!! AACTAATGTTTTAACAAACT+CGG + chr3_3:78043968-78043987 None:intergenic 20.0%
!! ATTATTATTGAAATAAGCAG+TGG - chr3_3:78044069-78044088 Msa0474990:intron 20.0%
!!! CTAAGTTTTGTATATTTAGA+AGG + chr3_3:78044674-78044693 None:intergenic 20.0%
!!! CTTTTATTTACAAAATCAGA+TGG - chr3_3:78043492-78043511 Msa0474990:intron 20.0%
!! ACTTAACTAACAAATTCAAT+TGG - chr3_3:78043556-78043575 Msa0474990:intron 20.0%
!! ACAAATTCAATTGGTTAATT+TGG - chr3_3:78043565-78043584 Msa0474990:intron 20.0%
!! ATGGTTAAATCAATTTAATC+CGG + chr3_3:78043618-78043637 None:intergenic 20.0%
!!! ATTGACTTACAAAGAAAAAA+CGG + chr3_3:78043652-78043671 None:intergenic 20.0%
!! AATTATGTGATTTAATTGAC+CGG - chr3_3:78043826-78043845 Msa0474990:intron 20.0%
!!! AACTAATGTTTTAACAAACT+CGG + chr3_3:78043968-78043987 None:intergenic 20.0%
!! ATTATTATTGAAATAAGCAG+TGG - chr3_3:78044069-78044088 Msa0474990:intron 20.0%
!!! CTAAGTTTTGTATATTTAGA+AGG + chr3_3:78044674-78044693 None:intergenic 20.0%
! AAACGGATACTAAAAATGAA+TGG - chr3_3:78043447-78043466 Msa0474990:intron 25.0%
! AAGAGAAGTTAAATATTGGA+CGG + chr3_3:78043475-78043494 None:intergenic 25.0%
!! GGATTAAATTGATTTAACCA+TGG - chr3_3:78043617-78043636 Msa0474990:intron 25.0%
!! TAAATTGATTTAACCATGGT+TGG - chr3_3:78043621-78043640 Msa0474990:intron 25.0%
! GACTTAGTATAGTAAAAAAC+CGG + chr3_3:78043885-78043904 None:intergenic 25.0%
! AATTTGATTCAGCATTCAAT+TGG + chr3_3:78044006-78044025 None:intergenic 25.0%
! AATATGTGTACAAGAGAATT+GGG - chr3_3:78044203-78044222 Msa0474990:CDS 25.0%
! AGAAACATCAAAGATTGTAT+TGG - chr3_3:78044595-78044614 Msa0474990:intron 25.0%
! AAAGAAGGCAAAAACAAAAT+AGG + chr3_3:78044643-78044662 None:intergenic 25.0%
! TAGAAGGAATTGAAAAAAGA+AGG + chr3_3:78044658-78044677 None:intergenic 25.0%
! AAACGGATACTAAAAATGAA+TGG - chr3_3:78043447-78043466 Msa0474990:intron 25.0%
! AAGAGAAGTTAAATATTGGA+CGG + chr3_3:78043475-78043494 None:intergenic 25.0%
!! GGATTAAATTGATTTAACCA+TGG - chr3_3:78043617-78043636 Msa0474990:intron 25.0%
!! TAAATTGATTTAACCATGGT+TGG - chr3_3:78043621-78043640 Msa0474990:intron 25.0%
! GACTTAGTATAGTAAAAAAC+CGG + chr3_3:78043885-78043904 None:intergenic 25.0%
! AATTTGATTCAGCATTCAAT+TGG + chr3_3:78044006-78044025 None:intergenic 25.0%
! AATATGTGTACAAGAGAATT+GGG - chr3_3:78044203-78044222 Msa0474990:CDS 25.0%
! AGAAACATCAAAGATTGTAT+TGG - chr3_3:78044595-78044614 Msa0474990:intron 25.0%
! AAAGAAGGCAAAAACAAAAT+AGG + chr3_3:78044643-78044662 None:intergenic 25.0%
! TAGAAGGAATTGAAAAAAGA+AGG + chr3_3:78044658-78044677 None:intergenic 25.0%
! TTGGTTTCTTCTTCCTTTTT+CGG + chr3_3:78042925-78042944 None:intergenic 30.0%
AACAGATTGCAAATCTCATA+TGG - chr3_3:78043086-78043105 Msa0474990:CDS 30.0%
! AGAAAAAAAGCATAACTCCA+CGG + chr3_3:78043352-78043371 None:intergenic 30.0%
TTTGTAAGTCAATTATAGCG+TGG - chr3_3:78043659-78043678 Msa0474990:intron 30.0%
ACCAATGTAATTATTACGCA+CGG - chr3_3:78043756-78043775 Msa0474990:intron 30.0%
GCATAATGATTTAATTGGTC+CGG + chr3_3:78043848-78043867 None:intergenic 30.0%
ACCAATTAAATCATTATGCG+CGG - chr3_3:78043849-78043868 Msa0474990:intron 30.0%
GAATATGTGTACAAGAGAAT+TGG - chr3_3:78044202-78044221 Msa0474990:CDS 30.0%
ATACTACTATAATCCATCCA+TGG - chr3_3:78044420-78044439 Msa0474990:CDS 30.0%
CAAAGATTGTATTGGAAATC+TGG - chr3_3:78044603-78044622 Msa0474990:intron 30.0%
TTGTATACTTTCTGTTGAAG+TGG - chr3_3:78044739-78044758 Msa0474990:five_prime_UTR 30.0%
TGTATACTTTCTGTTGAAGT+GGG - chr3_3:78044740-78044759 Msa0474990:five_prime_UTR 30.0%
! TTGGTTTCTTCTTCCTTTTT+CGG + chr3_3:78042925-78042944 None:intergenic 30.0%
AACAGATTGCAAATCTCATA+TGG - chr3_3:78043086-78043105 Msa0474990:CDS 30.0%
! AGAAAAAAAGCATAACTCCA+CGG + chr3_3:78043352-78043371 None:intergenic 30.0%
TTTGTAAGTCAATTATAGCG+TGG - chr3_3:78043659-78043678 Msa0474990:intron 30.0%
ACCAATGTAATTATTACGCA+CGG - chr3_3:78043756-78043775 Msa0474990:intron 30.0%
GCATAATGATTTAATTGGTC+CGG + chr3_3:78043848-78043867 None:intergenic 30.0%
ACCAATTAAATCATTATGCG+CGG - chr3_3:78043849-78043868 Msa0474990:intron 30.0%
GAATATGTGTACAAGAGAAT+TGG - chr3_3:78044202-78044221 Msa0474990:CDS 30.0%
ATACTACTATAATCCATCCA+TGG - chr3_3:78044420-78044439 Msa0474990:CDS 30.0%
CAAAGATTGTATTGGAAATC+TGG - chr3_3:78044603-78044622 Msa0474990:intron 30.0%
TTGTATACTTTCTGTTGAAG+TGG - chr3_3:78044739-78044758 Msa0474990:five_prime_UTR 30.0%
TTAGGAAGAGAAGAAAACAG+AGG - chr3_3:78042867-78042886 Msa0474990:CDS 35.0%
AAAAACAGAGGAACCGAAAA+AGG - chr3_3:78042909-78042928 Msa0474990:CDS 35.0%
AGATTGCAAATCTCATATGG+TGG - chr3_3:78043089-78043108 Msa0474990:CDS 35.0%
CACAATGCATGTGAACTTTA+AGG + chr3_3:78043404-78043423 None:intergenic 35.0%
TCCGTGCGTAATAATTACAT+TGG + chr3_3:78043760-78043779 None:intergenic 35.0%
TCCGCGCATAATGATTTAAT+TGG + chr3_3:78043853-78043872 None:intergenic 35.0%
ACCAACTAAATCATTGTGTG+CGG - chr3_3:78043932-78043951 Msa0474990:intron 35.0%
ACATATTCAACCAGCATTGT+TGG + chr3_3:78044190-78044209 None:intergenic 35.0%
TACTGTAGAAGAGACAAATG+TGG - chr3_3:78044375-78044394 Msa0474990:CDS 35.0%
TATGCATACAAATCCATGGA+TGG + chr3_3:78044436-78044455 None:intergenic 35.0%
TTGTATGCATACCCAGAAAT+TGG - chr3_3:78044445-78044464 Msa0474990:CDS 35.0%
ATGCAGGATATCCAATTTCT+GGG + chr3_3:78044459-78044478 None:intergenic 35.0%
TATGCAGGATATCCAATTTC+TGG + chr3_3:78044460-78044479 None:intergenic 35.0%
TTCTCATCACTGAACATTTG+TGG + chr3_3:78044535-78044554 None:intergenic 35.0%
CTTAGAGTATACTCTACAGA+TGG - chr3_3:78044689-78044708 Msa0474990:five_prime_UTR 35.0%
GTATACTTTCTGTTGAAGTG+GGG - chr3_3:78044741-78044760 Msa0474990:five_prime_UTR 35.0%
TTAGGAAGAGAAGAAAACAG+AGG - chr3_3:78042867-78042886 Msa0474990:CDS 35.0%
AAAAACAGAGGAACCGAAAA+AGG - chr3_3:78042909-78042928 Msa0474990:CDS 35.0%
AGATTGCAAATCTCATATGG+TGG - chr3_3:78043089-78043108 Msa0474990:CDS 35.0%
CACAATGCATGTGAACTTTA+AGG + chr3_3:78043404-78043423 None:intergenic 35.0%
TCCGTGCGTAATAATTACAT+TGG + chr3_3:78043760-78043779 None:intergenic 35.0%
TCCGCGCATAATGATTTAAT+TGG + chr3_3:78043853-78043872 None:intergenic 35.0%
ACCAACTAAATCATTGTGTG+CGG - chr3_3:78043932-78043951 Msa0474990:intron 35.0%
ACATATTCAACCAGCATTGT+TGG + chr3_3:78044190-78044209 None:intergenic 35.0%
TACTGTAGAAGAGACAAATG+TGG - chr3_3:78044375-78044394 Msa0474990:CDS 35.0%
TATGCATACAAATCCATGGA+TGG + chr3_3:78044436-78044455 None:intergenic 35.0%
TTGTATGCATACCCAGAAAT+TGG - chr3_3:78044445-78044464 Msa0474990:CDS 35.0%
ATGCAGGATATCCAATTTCT+GGG + chr3_3:78044459-78044478 None:intergenic 35.0%
TATGCAGGATATCCAATTTC+TGG + chr3_3:78044460-78044479 None:intergenic 35.0%
TTCTCATCACTGAACATTTG+TGG + chr3_3:78044535-78044554 None:intergenic 35.0%
CTTAGAGTATACTCTACAGA+TGG - chr3_3:78044689-78044708 Msa0474990:five_prime_UTR 35.0%
AGCAGAGTAACTAACACCAA+TGG - chr3_3:78042714-78042733 Msa0474990:three_prime_UTR 40.0%
GCAGAGTAACTAACACCAAT+GGG - chr3_3:78042715-78042734 Msa0474990:three_prime_UTR 40.0%
TCTTTCAATACCTCTCCCAT+TGG + chr3_3:78042733-78042752 None:intergenic 40.0%
AACAGAGGAAAGTAAGACAG+AGG - chr3_3:78042882-78042901 Msa0474990:CDS 40.0%
!! ATCTTTTGTTTCCTCTGGCT+TGG + chr3_3:78042944-78042963 None:intergenic 40.0%
!! GCTTCATCTTTTGTTTCCTC+TGG + chr3_3:78042949-78042968 None:intergenic 40.0%
ACTTTCAGCATAATCTCTGC+CGG + chr3_3:78042991-78043010 None:intergenic 40.0%
GTTATCACATCTTCAACACC+TGG + chr3_3:78043069-78043088 None:intergenic 40.0%
TCTCATATGGTGGTTGTGAA+AGG - chr3_3:78043099-78043118 Msa0474990:CDS 40.0%
ACTCTCTCCAAAACCTTCAA+TGG + chr3_3:78043138-78043157 None:intergenic 40.0%
GAGTTCAGAAGAAGAGTCAT+AGG - chr3_3:78043154-78043173 Msa0474990:CDS 40.0%
TCAGAAGAAGAGTCATAGGA+AGG - chr3_3:78043158-78043177 Msa0474990:CDS 40.0%
AAAAGTTGCTGAGGAAGAGA+AGG - chr3_3:78043221-78043240 Msa0474990:CDS 40.0%
TCTTCTTTCTTCTCCTCTTC+AGG + chr3_3:78043252-78043271 None:intergenic 40.0%
TGAAGAGGAGAAGAAAGAAG+AGG - chr3_3:78043251-78043270 Msa0474990:CDS 40.0%
GATTTGATCCTTTGAATCCG+TGG - chr3_3:78043332-78043351 Msa0474990:intron 40.0%
AGGACAACAATCACAATCTG+AGG + chr3_3:78043384-78043403 None:intergenic 40.0%
ATGCTATCGTTTGACTGAAC+CGG - chr3_3:78043596-78043615 Msa0474990:intron 40.0%
TCCGCACACAATGATTTAGT+TGG + chr3_3:78043936-78043955 None:intergenic 40.0%
TAAGCAGTGGAATAATGAGC+TGG - chr3_3:78044082-78044101 Msa0474990:intron 40.0%
AACTGATCTGAAGAACTCTG+AGG - chr3_3:78044141-78044160 Msa0474990:intron 40.0%
!! AACTCTGAGGTAAGTGTGAA+GGG - chr3_3:78044154-78044173 Msa0474990:CDS 40.0%
GATCATGAAGGAAGAGAAAG+TGG - chr3_3:78044237-78044256 Msa0474990:CDS 40.0%
!!! TTTTTTCTCTTCCTCGGCTT+TGG + chr3_3:78044272-78044291 None:intergenic 40.0%
!!! CTCCTCTTTTTTCTCTTCCT+CGG + chr3_3:78044278-78044297 None:intergenic 40.0%
AGAGGAGAAAGTTGAAGAAG+TGG - chr3_3:78044291-78044310 Msa0474990:CDS 40.0%
TGAGAAGAAAGAAGAAGGAG+AGG - chr3_3:78044315-78044334 Msa0474990:CDS 40.0%
GAGAAGAAAGAAGAAGGAGA+GGG - chr3_3:78044316-78044335 Msa0474990:CDS 40.0%
AGAAGAGACAAATGTGGAAG+AGG - chr3_3:78044381-78044400 Msa0474990:CDS 40.0%
TGGGTATGCATACAAATCCA+TGG + chr3_3:78044440-78044459 None:intergenic 40.0%
AGCAGAGTAACTAACACCAA+TGG - chr3_3:78042714-78042733 Msa0474990:three_prime_UTR 40.0%
GCAGAGTAACTAACACCAAT+GGG - chr3_3:78042715-78042734 Msa0474990:three_prime_UTR 40.0%
TCTTTCAATACCTCTCCCAT+TGG + chr3_3:78042733-78042752 None:intergenic 40.0%
AACAGAGGAAAGTAAGACAG+AGG - chr3_3:78042882-78042901 Msa0474990:CDS 40.0%
!! ATCTTTTGTTTCCTCTGGCT+TGG + chr3_3:78042944-78042963 None:intergenic 40.0%
!! GCTTCATCTTTTGTTTCCTC+TGG + chr3_3:78042949-78042968 None:intergenic 40.0%
ACTTTCAGCATAATCTCTGC+CGG + chr3_3:78042991-78043010 None:intergenic 40.0%
GTTATCACATCTTCAACACC+TGG + chr3_3:78043069-78043088 None:intergenic 40.0%
TCTCATATGGTGGTTGTGAA+AGG - chr3_3:78043099-78043118 Msa0474990:CDS 40.0%
ACTCTCTCCAAAACCTTCAA+TGG + chr3_3:78043138-78043157 None:intergenic 40.0%
GAGTTCAGAAGAAGAGTCAT+AGG - chr3_3:78043154-78043173 Msa0474990:CDS 40.0%
TCAGAAGAAGAGTCATAGGA+AGG - chr3_3:78043158-78043177 Msa0474990:CDS 40.0%
AAAAGTTGCTGAGGAAGAGA+AGG - chr3_3:78043221-78043240 Msa0474990:CDS 40.0%
TCTTCTTTCTTCTCCTCTTC+AGG + chr3_3:78043252-78043271 None:intergenic 40.0%
TGAAGAGGAGAAGAAAGAAG+AGG - chr3_3:78043251-78043270 Msa0474990:CDS 40.0%
GATTTGATCCTTTGAATCCG+TGG - chr3_3:78043332-78043351 Msa0474990:intron 40.0%
AGGACAACAATCACAATCTG+AGG + chr3_3:78043384-78043403 None:intergenic 40.0%
ATGCTATCGTTTGACTGAAC+CGG - chr3_3:78043596-78043615 Msa0474990:intron 40.0%
TCCGCACACAATGATTTAGT+TGG + chr3_3:78043936-78043955 None:intergenic 40.0%
TAAGCAGTGGAATAATGAGC+TGG - chr3_3:78044082-78044101 Msa0474990:intron 40.0%
AACTGATCTGAAGAACTCTG+AGG - chr3_3:78044141-78044160 Msa0474990:intron 40.0%
!! AACTCTGAGGTAAGTGTGAA+GGG - chr3_3:78044154-78044173 Msa0474990:CDS 40.0%
GATCATGAAGGAAGAGAAAG+TGG - chr3_3:78044237-78044256 Msa0474990:CDS 40.0%
!!! TTTTTTCTCTTCCTCGGCTT+TGG + chr3_3:78044272-78044291 None:intergenic 40.0%
!!! CTCCTCTTTTTTCTCTTCCT+CGG + chr3_3:78044278-78044297 None:intergenic 40.0%
AGAGGAGAAAGTTGAAGAAG+TGG - chr3_3:78044291-78044310 Msa0474990:CDS 40.0%
TGAGAAGAAAGAAGAAGGAG+AGG - chr3_3:78044315-78044334 Msa0474990:CDS 40.0%
GAGAAGAAAGAAGAAGGAGA+GGG - chr3_3:78044316-78044335 Msa0474990:CDS 40.0%
AGAAGAGACAAATGTGGAAG+AGG - chr3_3:78044381-78044400 Msa0474990:CDS 40.0%
TGGGTATGCATACAAATCCA+TGG + chr3_3:78044440-78044459 None:intergenic 40.0%
TACTCTGCTGCTGAGATTAC+AGG + chr3_3:78042703-78042722 None:intergenic 45.0%
GTAACTAACACCAATGGGAG+AGG - chr3_3:78042720-78042739 Msa0474990:three_prime_UTR 45.0%
AGAGGAAAGTAAGACAGAGG+AGG - chr3_3:78042885-78042904 Msa0474990:CDS 45.0%
GACAGAGGAGGAAAAAACAG+AGG - chr3_3:78042897-78042916 Msa0474990:CDS 45.0%
TGCATTGTGAAAGCTGTGCT+CGG - chr3_3:78043016-78043035 Msa0474990:CDS 45.0%
! CGGTCGTTGAAAGATTTTCC+AGG - chr3_3:78043048-78043067 Msa0474990:CDS 45.0%
AGAGAAAGCAGAGCCATTGA+AGG - chr3_3:78043122-78043141 Msa0474990:CDS 45.0%
! AGCAGAGCCATTGAAGGTTT+TGG - chr3_3:78043128-78043147 Msa0474990:CDS 45.0%
!! TCAGCAACTTTTTCCTCCTC+AGG + chr3_3:78043213-78043232 None:intergenic 45.0%
TGAGGAGGAAAAAGTTGCTG+AGG - chr3_3:78043212-78043231 Msa0474990:CDS 45.0%
GCATAACTCCACGGATTCAA+AGG + chr3_3:78043343-78043362 None:intergenic 45.0%
CATGCATTGTGAAGCTTGTG+CGG - chr3_3:78043413-78043432 Msa0474990:intron 45.0%
GTGCGGAGGAGATCAAAAAA+CGG - chr3_3:78043430-78043449 Msa0474990:intron 45.0%
AAAAACGGCTGAACCAACCA+TGG + chr3_3:78043637-78043656 None:intergenic 45.0%
TATGCGCGGAATATCATGTC+CGG - chr3_3:78043863-78043882 Msa0474990:intron 45.0%
!! GGTTGATGTAATTGACTCGC+AGG - chr3_3:78044103-78044122 Msa0474990:intron 45.0%
!! ATGTAATTGACTCGCAGGAG+TGG - chr3_3:78044108-78044127 Msa0474990:intron 45.0%
!! GAACTCTGAGGTAAGTGTGA+AGG - chr3_3:78044153-78044172 Msa0474990:CDS 45.0%
!! ACTCTGAGGTAAGTGTGAAG+GGG - chr3_3:78044155-78044174 Msa0474990:CDS 45.0%
GGTGTATGATCCAACAATGC+TGG - chr3_3:78044177-78044196 Msa0474990:CDS 45.0%
GAAGCATGCAGTGATCATGA+AGG - chr3_3:78044225-78044244 Msa0474990:CDS 45.0%
CATGAAGGAAGAGAAAGTGG+AGG - chr3_3:78044240-78044259 Msa0474990:CDS 45.0%
AGCCGAGGAAGAGAAAAAAG+AGG - chr3_3:78044273-78044292 Msa0474990:CDS 45.0%
GTGGCTGAGAAGAAAGAAGA+AGG - chr3_3:78044310-78044329 Msa0474990:CDS 45.0%
TTTCTCCTCTTCTTGTCGCT+TGG + chr3_3:78044347-78044366 None:intergenic 45.0%
GAGCATGATAGTAAGCAGCT+GGG + chr3_3:78044483-78044502 None:intergenic 45.0%
TGAGCATGATAGTAAGCAGC+TGG + chr3_3:78044484-78044503 None:intergenic 45.0%
ACATGACGCTGCATGCATTT+GGG + chr3_3:78044558-78044577 None:intergenic 45.0%
TACTCTGCTGCTGAGATTAC+AGG + chr3_3:78042703-78042722 None:intergenic 45.0%
GTAACTAACACCAATGGGAG+AGG - chr3_3:78042720-78042739 Msa0474990:three_prime_UTR 45.0%
AGAGGAAAGTAAGACAGAGG+AGG - chr3_3:78042885-78042904 Msa0474990:CDS 45.0%
GACAGAGGAGGAAAAAACAG+AGG - chr3_3:78042897-78042916 Msa0474990:CDS 45.0%
TGCATTGTGAAAGCTGTGCT+CGG - chr3_3:78043016-78043035 Msa0474990:CDS 45.0%
! CGGTCGTTGAAAGATTTTCC+AGG - chr3_3:78043048-78043067 Msa0474990:CDS 45.0%
AGAGAAAGCAGAGCCATTGA+AGG - chr3_3:78043122-78043141 Msa0474990:CDS 45.0%
! AGCAGAGCCATTGAAGGTTT+TGG - chr3_3:78043128-78043147 Msa0474990:CDS 45.0%
!! TCAGCAACTTTTTCCTCCTC+AGG + chr3_3:78043213-78043232 None:intergenic 45.0%
TGAGGAGGAAAAAGTTGCTG+AGG - chr3_3:78043212-78043231 Msa0474990:CDS 45.0%
GCATAACTCCACGGATTCAA+AGG + chr3_3:78043343-78043362 None:intergenic 45.0%
CATGCATTGTGAAGCTTGTG+CGG - chr3_3:78043413-78043432 Msa0474990:intron 45.0%
GTGCGGAGGAGATCAAAAAA+CGG - chr3_3:78043430-78043449 Msa0474990:intron 45.0%
AAAAACGGCTGAACCAACCA+TGG + chr3_3:78043637-78043656 None:intergenic 45.0%
TATGCGCGGAATATCATGTC+CGG - chr3_3:78043863-78043882 Msa0474990:intron 45.0%
!! GGTTGATGTAATTGACTCGC+AGG - chr3_3:78044103-78044122 Msa0474990:intron 45.0%
!! ATGTAATTGACTCGCAGGAG+TGG - chr3_3:78044108-78044127 Msa0474990:intron 45.0%
!! GAACTCTGAGGTAAGTGTGA+AGG - chr3_3:78044153-78044172 Msa0474990:CDS 45.0%
!! ACTCTGAGGTAAGTGTGAAG+GGG - chr3_3:78044155-78044174 Msa0474990:CDS 45.0%
GGTGTATGATCCAACAATGC+TGG - chr3_3:78044177-78044196 Msa0474990:CDS 45.0%
GAAGCATGCAGTGATCATGA+AGG - chr3_3:78044225-78044244 Msa0474990:CDS 45.0%
CATGAAGGAAGAGAAAGTGG+AGG - chr3_3:78044240-78044259 Msa0474990:CDS 45.0%
AGCCGAGGAAGAGAAAAAAG+AGG - chr3_3:78044273-78044292 Msa0474990:CDS 45.0%
GTGGCTGAGAAGAAAGAAGA+AGG - chr3_3:78044310-78044329 Msa0474990:CDS 45.0%
TTTCTCCTCTTCTTGTCGCT+TGG + chr3_3:78044347-78044366 None:intergenic 45.0%
GAGCATGATAGTAAGCAGCT+GGG + chr3_3:78044483-78044502 None:intergenic 45.0%
TGAGCATGATAGTAAGCAGC+TGG + chr3_3:78044484-78044503 None:intergenic 45.0%
ACATGACGCTGCATGCATTT+GGG + chr3_3:78044558-78044577 None:intergenic 45.0%
!!! TTTTATTTTTTATTTTGTTT+AGG - chr3_3:78042849-78042868 Msa0474990:CDS 5.0%
!!! TTTTATTTTTTATTTTGTTT+AGG - chr3_3:78042849-78042868 Msa0474990:CDS 5.0%
GGAAGAAGAAACCAAGCCAG+AGG - chr3_3:78042930-78042949 Msa0474990:CDS 50.0%
TTCAGCATAATCTCTGCCGG+AGG + chr3_3:78042988-78043007 None:intergenic 50.0%
TTTCCTCCTCAGGAGCAGTT+GGG + chr3_3:78043203-78043222 None:intergenic 50.0%
! TTTTCCTCCTCAGGAGCAGT+TGG + chr3_3:78043204-78043223 None:intergenic 50.0%
! TTGACTCGCAGGAGTGGAAT+TGG - chr3_3:78044114-78044133 Msa0474990:intron 50.0%
!! CTCTGAGGTAAGTGTGAAGG+GGG - chr3_3:78044156-78044175 Msa0474990:CDS 50.0%
GAAGGAAGAGAAAGTGGAGG+AGG - chr3_3:78044243-78044262 Msa0474990:CDS 50.0%
GAAAGAAGAAGGAGAGGGTG+AGG - chr3_3:78044321-78044340 Msa0474990:CDS 50.0%
TAGTAAGCAGCTGGGTATGC+AGG + chr3_3:78044475-78044494 None:intergenic 50.0%
TCACTGAACATTTGTGGCGC+CGG + chr3_3:78044529-78044548 None:intergenic 50.0%
CACATGACGCTGCATGCATT+TGG + chr3_3:78044559-78044578 None:intergenic 50.0%
GGAAGAAGAAACCAAGCCAG+AGG - chr3_3:78042930-78042949 Msa0474990:CDS 50.0%
TTCAGCATAATCTCTGCCGG+AGG + chr3_3:78042988-78043007 None:intergenic 50.0%
TTTCCTCCTCAGGAGCAGTT+GGG + chr3_3:78043203-78043222 None:intergenic 50.0%
! TTTTCCTCCTCAGGAGCAGT+TGG + chr3_3:78043204-78043223 None:intergenic 50.0%
! TTGACTCGCAGGAGTGGAAT+TGG - chr3_3:78044114-78044133 Msa0474990:intron 50.0%
!! CTCTGAGGTAAGTGTGAAGG+GGG - chr3_3:78044156-78044175 Msa0474990:CDS 50.0%
GAAGGAAGAGAAAGTGGAGG+AGG - chr3_3:78044243-78044262 Msa0474990:CDS 50.0%
GAAAGAAGAAGGAGAGGGTG+AGG - chr3_3:78044321-78044340 Msa0474990:CDS 50.0%
TAGTAAGCAGCTGGGTATGC+AGG + chr3_3:78044475-78044494 None:intergenic 50.0%
TCACTGAACATTTGTGGCGC+CGG + chr3_3:78044529-78044548 None:intergenic 50.0%
CACATGACGCTGCATGCATT+TGG + chr3_3:78044559-78044578 None:intergenic 50.0%
AGCATAATCTCTGCCGGAGG+CGG + chr3_3:78042985-78043004 None:intergenic 55.0%
GCTGTGCTCGGAAAGTTCGT+CGG - chr3_3:78043028-78043047 Msa0474990:CDS 55.0%
TCCTCAGGAGCAGTTGGGAT+CGG + chr3_3:78043198-78043217 None:intergenic 55.0%
AGAGAAGGCTGCACCTGAAG+AGG - chr3_3:78043236-78043255 Msa0474990:CDS 55.0%
GCATTGTGAAGCTTGTGCGG+AGG - chr3_3:78043416-78043435 Msa0474990:intron 55.0%
ACTCGCAGGAGTGGAATTGG+TGG - chr3_3:78044117-78044136 Msa0474990:intron 55.0%
TGAGGCCAAGCGACAAGAAG+AGG - chr3_3:78044339-78044358 Msa0474990:CDS 55.0%
AGCATAATCTCTGCCGGAGG+CGG + chr3_3:78042985-78043004 None:intergenic 55.0%
GCTGTGCTCGGAAAGTTCGT+CGG - chr3_3:78043028-78043047 Msa0474990:CDS 55.0%
TCCTCAGGAGCAGTTGGGAT+CGG + chr3_3:78043198-78043217 None:intergenic 55.0%
AGAGAAGGCTGCACCTGAAG+AGG - chr3_3:78043236-78043255 Msa0474990:CDS 55.0%
GCATTGTGAAGCTTGTGCGG+AGG - chr3_3:78043416-78043435 Msa0474990:intron 55.0%
ACTCGCAGGAGTGGAATTGG+TGG - chr3_3:78044117-78044136 Msa0474990:intron 55.0%
TGAGGCCAAGCGACAAGAAG+AGG - chr3_3:78044339-78044358 Msa0474990:CDS 55.0%
TGATGTTCCTCCACCGCCTC+CGG - chr3_3:78042969-78042988 Msa0474990:CDS 60.0%
ATAATCTCTGCCGGAGGCGG+TGG + chr3_3:78042982-78043001 None:intergenic 60.0%
TCCGATCCCAACTGCTCCTG+AGG - chr3_3:78043194-78043213 Msa0474990:CDS 60.0%
GATCCCAACTGCTCCTGAGG+AGG - chr3_3:78043197-78043216 Msa0474990:CDS 60.0%
!! AACATTTGTGGCGCCGGTGG+CGG + chr3_3:78044523-78044542 None:intergenic 60.0%
! CTGAACATTTGTGGCGCCGG+TGG + chr3_3:78044526-78044545 None:intergenic 60.0%
TGATGTTCCTCCACCGCCTC+CGG - chr3_3:78042969-78042988 Msa0474990:CDS 60.0%
ATAATCTCTGCCGGAGGCGG+TGG + chr3_3:78042982-78043001 None:intergenic 60.0%
TCCGATCCCAACTGCTCCTG+AGG - chr3_3:78043194-78043213 Msa0474990:CDS 60.0%
GATCCCAACTGCTCCTGAGG+AGG - chr3_3:78043197-78043216 Msa0474990:CDS 60.0%
!! AACATTTGTGGCGCCGGTGG+CGG + chr3_3:78044523-78044542 None:intergenic 60.0%
! CTGAACATTTGTGGCGCCGG+TGG + chr3_3:78044526-78044545 None:intergenic 60.0%
GGAGGAGGAAGCCAAAGCCG+AGG - chr3_3:78044258-78044277 Msa0474990:CDS 65.0%
ATACCCTCCACCACCGCCAC+CGG - chr3_3:78044507-78044526 Msa0474990:CDS 65.0%
GGAGGAGGAAGCCAAAGCCG+AGG - chr3_3:78044258-78044277 Msa0474990:CDS 65.0%
ATACCCTCCACCACCGCCAC+CGG - chr3_3:78044507-78044526 Msa0474990:CDS 65.0%
ATCTCTGCCGGAGGCGGTGG+AGG + chr3_3:78042979-78042998 None:intergenic 70.0%
!! ATTTGTGGCGCCGGTGGCGG+TGG + chr3_3:78044520-78044539 None:intergenic 70.0%
ATCTCTGCCGGAGGCGGTGG+AGG + chr3_3:78042979-78042998 None:intergenic 70.0%
!! ATTTGTGGCGCCGGTGGCGG+TGG + chr3_3:78044520-78044539 None:intergenic 70.0%
!!! GCGCCGGTGGCGGTGGTGGA+GGG + chr3_3:78044513-78044532 None:intergenic 80.0%
!!! TGTGGCGCCGGTGGCGGTGG+TGG + chr3_3:78044517-78044536 None:intergenic 80.0%
!!! GCGCCGGTGGCGGTGGTGGA+GGG + chr3_3:78044513-78044532 None:intergenic 80.0%
!!! TGTGGCGCCGGTGGCGGTGG+TGG + chr3_3:78044517-78044536 None:intergenic 80.0%
!!! GGCGCCGGTGGCGGTGGTGG+AGG + chr3_3:78044514-78044533 None:intergenic 85.0%
!!! GGCGCCGGTGGCGGTGGTGG+AGG + chr3_3:78044514-78044533 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 78042654 78044762 78042654 ID=Msa0474990;Name=Msa0474990
chr3_3 mRNA 78042654 78044762 78042654 ID=Msa0474990-mRNA-1;Parent=Msa0474990;Name=Msa0474990-mRNA-1;_AED=0.23;_eAED=0.23;_QI=79|1|1|1|1|1|4|183|317
chr3_3 exon 78042654 78043291 78042654 ID=Msa0474990-mRNA-1:exon:20976;Parent=Msa0474990-mRNA-1
chr3_3 exon 78043948 78044035 78043948 ID=Msa0474990-mRNA-1:exon:20975;Parent=Msa0474990-mRNA-1
chr3_3 exon 78044144 78044545 78044144 ID=Msa0474990-mRNA-1:exon:20974;Parent=Msa0474990-mRNA-1
chr3_3 exon 78044675 78044762 78044675 ID=Msa0474990-mRNA-1:exon:20973;Parent=Msa0474990-mRNA-1
chr3_3 five_prime_UTR 78044684 78044762 78044684 ID=Msa0474990-mRNA-1:five_prime_utr;Parent=Msa0474990-mRNA-1
chr3_3 CDS 78044675 78044683 78044675 ID=Msa0474990-mRNA-1:cds;Parent=Msa0474990-mRNA-1
chr3_3 CDS 78044144 78044545 78044144 ID=Msa0474990-mRNA-1:cds;Parent=Msa0474990-mRNA-1
chr3_3 CDS 78043948 78044035 78043948 ID=Msa0474990-mRNA-1:cds;Parent=Msa0474990-mRNA-1
chr3_3 CDS 78042837 78043291 78042837 ID=Msa0474990-mRNA-1:cds;Parent=Msa0474990-mRNA-1
chr3_3 three_prime_UTR 78042654 78042836 78042654 ID=Msa0474990-mRNA-1:three_prime_utr;Parent=Msa0474990-mRNA-1
Gene Sequence

>Msa0474990

ATGGGAGAGGAAGAGAAGAAAACAGAGGAAAGTAAGACAGAGGAGGAAAAAACAGAGGAACCGAAAAAGGAAGAAGAAACCAAGCCAGAGGAAACAAAAGATGAAGCTGATGTTCCTCCACCGCCTCCGGCAGAGATTATGCTGAAAGTTTTCATGCATTGTGAAAGCTGTGCTCGGAAAGTTCGTCGGTCGTTGAAAGATTTTCCAGGTGTTGAAGATGTGATAACAGATTGCAAATCTCATATGGTGGTTGTGAAAGGAGAGAAAGCAGAGCCATTGAAGGTTTTGGAGAGAGTTCAGAAGAAGAGTCATAGGAAGGTTGAGCTTCTTTCTCCGATCCCAACTGCTCCTGAGGAGGAAAAAGTTGCTGAGGAAGAGAAGGCTGCACCTGAAGAGGAGAAGAAAGAAGAGCCTCAGATTGTGATTGTTGTCCTTAAAGTTCACATGCATTGTGAAGCTTGTGCGGAGGAGATCAAAAAACGGATACTAAAAATGAATGGAGTGGAATTGGTGGAAACTGATCTGAAGAACTCTGAGGTAAGTGTGAAGGGGGTGTATGATCCAACAATGCTGGTTGAATATGTGTACAAGAGAATTGGGAAGCATGCAGTGATCATGAAGGAAGAGAAAGTGGAGGAGGAAGCCAAAGCCGAGGAAGAGAAAAAAGAGGAGAAAGTTGAAGAAGTGGCTGAGAAGAAAGAAGAAGGAGAGGGTGAGGCCAAGCGACAAGAAGAGGAGAAAGAAGCAGTTACTGTAGAAGAGACAAATGTGGAAGAGGAGATGAAGAAATATCAATACTACTATAATCCATCCATGGATTTGTATGCATACCCAGAAATTGGATATCCTGCATACCCAGCTGCTTACTATCATGCTCATGCATACCCTCCACCACCGCCACCGGCGCCACAAATGTTCAGTGATGAGAACCCAAATGCATGCAGCGTCATGTGA
Protein sequence

>Msa0474990

MGEEEKKTEESKTEEEKTEEPKKEEETKPEETKDEADVPPPPPAEIMLKVFMHCESCARKVRRSLKDFPGVEDVITDCKSHMVVVKGEKAEPLKVLERVQKKSHRKVELLSPIPTAPEEEKVAEEEKAAPEEEKKEEPQIVIVVLKVHMHCEACAEEIKKRILKMNGVELVETDLKNSEVSVKGVYDPTMLVEYVYKRIGKHAVIMKEEKVEEEAKAEEEKKEEKVEEVAEKKEEGEGEAKRQEEEKEAVTVEETNVEEEMKKYQYYYNPSMDLYAYPEIGYPAYPAAYYHAHAYPPPPPPAPQMFSDENPNACSVM*