AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0475910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0475910 MtrunA17_Chr3g0145121 93.688 301 15 1 1 297 1 301 0.0 535
Msa0475910 MtrunA17_Chr4g0035891 56.369 314 100 9 1 296 1 295 1.63e-101 299
Msa0475910 MtrunA17_Chr8g0372291 41.304 276 135 7 21 281 25 288 1.43e-53 176
Msa0475910 MtrunA17_Chr8g0340401 37.868 272 130 7 39 280 33 295 7.54e-46 157
Msa0475910 MtrunA17_Chr5g0404981 39.385 325 150 9 1 282 51 371 1.21e-45 158
Msa0475910 MtrunA17_Chr3g0140331 41.199 267 126 9 36 281 67 323 7.56e-45 155
Msa0475910 MtrunA17_Chr1g0146231 34.653 303 153 8 18 281 8 304 2.68e-43 151
Msa0475910 MtrunA17_Chr1g0169431 62.637 91 34 0 190 280 151 241 3.15e-34 124
Msa0475910 MtrunA17_Chr1g0213161 35.841 226 110 6 103 293 9 234 9.59e-33 120
Msa0475910 MtrunA17_Chr1g0199671 76.923 65 15 0 211 275 242 306 1.10e-32 122
Msa0475910 MtrunA17_Chr7g0253101 38.333 240 97 9 80 275 20 252 1.11e-32 121
Msa0475910 MtrunA17_Chr6g0461591 80.000 65 13 0 211 275 192 256 2.41e-32 120
Msa0475910 MtrunA17_Chr2g0326771 68.493 73 23 0 203 275 208 280 4.16e-32 120
Msa0475910 MtrunA17_Chr4g0028961 73.134 67 18 0 211 277 232 298 2.31e-31 119
Msa0475910 MtrunA17_Chr5g0395391 62.025 79 30 0 202 280 261 339 3.36e-29 114
Msa0475910 MtrunA17_Chr5g0395391 54.945 91 41 0 192 282 149 239 4.90e-27 108
Msa0475910 MtrunA17_Chr7g0232671 58.730 63 26 0 210 272 186 248 2.78e-21 90.5
Msa0475910 MtrunA17_Chr7g0232701 55.556 63 28 0 210 272 72 134 5.69e-20 84.0
Msa0475910 MtrunA17_Chr7g0232681 31.844 179 107 6 100 276 30 195 9.32e-20 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0475910 AT4G36240.1 43.426 251 101 7 40 278 10 231 1.11e-52 172
Msa0475910 AT5G66320.2 39.936 313 145 9 8 278 5 316 3.55e-50 169
Msa0475910 AT5G66320.1 39.936 313 145 9 8 278 5 316 3.55e-50 169
Msa0475910 AT4G34680.1 42.308 286 111 10 6 280 7 249 3.47e-46 157
Msa0475910 AT4G34680.2 42.308 286 111 10 6 280 7 249 3.47e-46 157
Msa0475910 AT4G32890.1 39.858 281 132 13 21 280 2 266 3.71e-46 158
Msa0475910 AT3G60530.1 46.277 188 73 5 94 278 63 225 1.76e-41 144
Msa0475910 AT5G25830.1 38.028 284 125 12 40 280 13 288 3.79e-41 145
Msa0475910 AT2G45050.1 39.524 210 94 4 87 281 58 249 1.27e-38 137
Msa0475910 AT3G51080.1 82.353 68 12 0 211 278 221 288 3.64e-36 132
Msa0475910 AT3G54810.1 73.529 68 18 0 211 278 229 296 5.73e-32 121
Msa0475910 AT3G54810.2 73.529 68 18 0 211 278 229 296 5.73e-32 121
Msa0475910 AT3G24050.1 65.476 84 28 1 194 277 178 260 6.18e-32 120
Msa0475910 AT1G08010.2 63.636 77 28 0 201 277 210 286 5.76e-31 118
Msa0475910 AT1G08010.1 63.636 77 28 0 201 277 210 286 5.76e-31 118
Msa0475910 AT1G08010.3 63.636 77 28 0 201 277 210 286 5.76e-31 118
Msa0475910 AT1G08000.2 56.383 94 34 1 191 277 191 284 1.45e-29 114
Msa0475910 AT1G08000.1 56.383 94 34 1 191 277 191 284 1.45e-29 114
Msa0475910 AT3G45170.1 55.422 83 37 0 196 278 100 182 2.51e-27 105
Msa0475910 AT2G28340.1 61.538 65 25 0 213 277 193 257 7.22e-25 101

Find 101 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGTAACTGACCCTCTTCT+TGG 0.222887 3_3:+79607030 None:intergenic
AAGAAGAAAGGTAGGAAAAT+TGG 0.263847 3_3:+79606581 None:intergenic
GAGTAATTCGGTTGAGAAAA+TGG 0.282779 3_3:+79607438 None:intergenic
TTCTCATCTCCAGCACTTTA+CGG 0.303517 3_3:+79606835 None:intergenic
CAGCACTTTACGGTGGCTAT+TGG 0.317365 3_3:+79606845 None:intergenic
AGCAGGTAACGGATATTATT+AGG 0.332279 3_3:-79606625 Msa0475910:three_prime_UTR
TCCACCAACCCGGTTTGAAC+CGG 0.342805 3_3:-79606720 Msa0475910:three_prime_UTR
CTCAGCAAGTGGTAACCATT+TGG 0.349550 3_3:+79606766 None:intergenic
GAAAACCCAACCCTCGCGTT+TGG 0.352223 3_3:-79607142 Msa0475910:CDS
ACCGCCAACACGGTGGTTGC+CGG 0.362678 3_3:-79607622 Msa0475910:CDS
TTCTTGGGCCTCAAGAGCCT+CGG 0.380431 3_3:+79607046 None:intergenic
GGATGATGACGTGGCAGGTC+TGG 0.383333 3_3:-79607336 Msa0475910:CDS
GCTGAGTCATTCATTAGATT+AGG 0.386506 3_3:-79606749 Msa0475910:exon
TGGACCGCAACCCGGTTTAC+CGG 0.387691 3_3:-79606796 Msa0475910:CDS
TTGGGTCTGAGCCGGTAAAC+CGG 0.389320 3_3:+79606785 None:intergenic
TAGGCGGCGGCAGCAGCAGC+AGG 0.398906 3_3:-79606642 Msa0475910:three_prime_UTR
TGAGCCCAAACGCGAGGGTT+GGG 0.405637 3_3:+79607137 None:intergenic
AAAACCCAACCCTCGCGTTT+GGG 0.407277 3_3:-79607141 Msa0475910:CDS
GTGTTGGTTTGAATTTGAAC+CGG 0.408949 3_3:+79607260 None:intergenic
AAAAGTAACCCGGTTCAAAC+CGG 0.417176 3_3:+79606711 None:intergenic
TGAATTTCACTGCTGAAAGT+TGG 0.418828 3_3:+79606870 None:intergenic
TTGTAACTGACCCTCTTCTT+GGG 0.419497 3_3:+79607031 None:intergenic
GGGTAGAGAAGAGATAGTTC+TGG 0.431245 3_3:+79607281 None:intergenic
TCAGCAAGTGGTAACCATTT+GGG 0.434470 3_3:+79606767 None:intergenic
GAATTTCACTGCTGAAAGTT+GGG 0.435175 3_3:+79606871 None:intergenic
ACTGCTGAAAGTTGGGCTAC+AGG 0.440191 3_3:+79606878 None:intergenic
TGCGGGGTTCGTTATAAATC+AGG 0.450021 3_3:-79606927 Msa0475910:CDS
ACTCACGGGAACGAGTAATT+CGG 0.455413 3_3:+79607426 None:intergenic
CTGAGCCCAAACGCGAGGGT+TGG 0.457925 3_3:+79607136 None:intergenic
CAGTGGAGAACCGGTCCGTT+GGG 0.465140 3_3:-79606972 Msa0475910:CDS
AAGACGCCGCAGTGGAGAAC+CGG 0.467079 3_3:-79606981 Msa0475910:CDS
CTTTGAAACCGAGTTTAAGA+AGG 0.468143 3_3:-79607690 Msa0475910:CDS
AAACCCTTTGTAACGCGTGC+GGG 0.468327 3_3:-79606944 Msa0475910:CDS
ACCGGCAACCACCGTGTTGG+CGG 0.469757 3_3:+79607621 None:intergenic
CCCGGTTCAAACCGGGTTGG+TGG 0.470922 3_3:+79606719 None:intergenic
AGGAGAAACGGCAGTGAAGT+TGG 0.471721 3_3:+79607877 None:intergenic
CTTCACGGTTCTGGTCTTCG+TGG 0.473101 3_3:+79607169 None:intergenic
TCTTGGGCCTCAAGAGCCTC+GGG 0.483424 3_3:+79607047 None:intergenic
GGTAGAGAAGAGATAGTTCT+GGG 0.490371 3_3:+79607282 None:intergenic
TTCTTCTGTTTCTTCGCTGG+TGG 0.490862 3_3:+79607074 None:intergenic
ACTGCGGCGTCTTCTGCACC+TGG 0.496651 3_3:+79606991 None:intergenic
GCGGCAGCAGCAGCAGGTAA+CGG 0.497106 3_3:-79606636 Msa0475910:three_prime_UTR
GCAGTGGAGAACCGGTCCGT+TGG 0.505231 3_3:-79606973 Msa0475910:CDS
AATAAGAATCGAAGGAGAAA+CGG 0.505939 3_3:+79607865 None:intergenic
CTCCTTGACTTCTCTAACGG+CGG 0.512576 3_3:-79607577 Msa0475910:CDS
CCACCAACCCGGTTTGAACC+GGG 0.512758 3_3:-79606719 Msa0475910:three_prime_UTR
AGAAGAAGAATAAGAATCGA+AGG 0.513415 3_3:+79607857 None:intergenic
CAATAGCCACCGTAAAGTGC+TGG 0.515151 3_3:-79606844 Msa0475910:CDS
ATGACGTGGCAGGTCTGGAA+TGG 0.521490 3_3:-79607331 Msa0475910:CDS
AACCCCGCACGCGTTACAAA+GGG 0.526943 3_3:+79606941 None:intergenic
TGAGAAAATGGAAGAATCAA+AGG 0.527539 3_3:+79607450 None:intergenic
GTAGTGCTAGTCAGCTAGCT+AGG 0.541574 3_3:-79606661 Msa0475910:three_prime_UTR
ACGACGGTGTAGTCATTGCC+AGG 0.543797 3_3:-79607009 Msa0475910:CDS
CTGAAAGTTGGGCTACAGGC+CGG 0.545068 3_3:+79606882 None:intergenic
CTAGTCAGCTAGCTAGGCGG+CGG 0.546585 3_3:-79606655 Msa0475910:three_prime_UTR
TGGGTCTGAGCCGGTAAACC+GGG 0.548677 3_3:+79606786 None:intergenic
AACCCTTTGTAACGCGTGCG+GGG 0.556096 3_3:-79606943 Msa0475910:CDS
AGAAAGAGGAAAGGAATGGT+TGG 0.560194 3_3:-79606816 Msa0475910:CDS
ACAAACTCCCTTCTTAAACT+CGG 0.560314 3_3:+79607682 None:intergenic
GAACCCCGCACGCGTTACAA+AGG 0.560484 3_3:+79606940 None:intergenic
TTACAGGATGATGACGTGGC+AGG 0.560919 3_3:-79607341 Msa0475910:intron
TGAGCCGGTAAACCGGGTTG+CGG 0.561596 3_3:+79606792 None:intergenic
GCTCTTGAGGCCCAAGAAGA+GGG 0.561687 3_3:-79607041 Msa0475910:CDS
GTAACCATTTGGGTCTGAGC+CGG 0.562666 3_3:+79606777 None:intergenic
GGGCGCTGAGCCCAAACGCG+AGG 0.563588 3_3:+79607131 None:intergenic
TTTGAAACCGAGTTTAAGAA+GGG 0.567414 3_3:-79607689 Msa0475910:CDS
GGCTCTTGAGGCCCAAGAAG+AGG 0.567428 3_3:-79607042 Msa0475910:CDS
GAAGTCAAGGAGGTCGTCAA+CGG 0.569324 3_3:+79607588 None:intergenic
CACCGCCGTTAGAGAAGTCA+AGG 0.571693 3_3:+79607575 None:intergenic
ATCTTCTGAGAGTGATTGAG+AGG 0.572536 3_3:+79607498 None:intergenic
CTGGAGATGAGAAAGAGGAA+AGG 0.573501 3_3:-79606825 Msa0475910:CDS
GGTAACGGATATTATTAGGA+AGG 0.573529 3_3:-79606621 Msa0475910:three_prime_UTR
TTTACCGGCTCAGACCCAAA+TGG 0.575540 3_3:-79606781 Msa0475910:CDS
TGTTGGTTTGAATTTGAACC+GGG 0.578403 3_3:+79607261 None:intergenic
GATGAGAAAGAGGAAAGGAA+TGG 0.578460 3_3:-79606820 Msa0475910:CDS
AAAGTAACCCGGTTCAAACC+GGG 0.580211 3_3:+79606712 None:intergenic
TGACGTGGCAGGTCTGGAAT+GGG 0.589105 3_3:-79607330 Msa0475910:CDS
GGAATGGTTGGACCGCAACC+CGG 0.596301 3_3:-79606804 Msa0475910:CDS
AAGTGCTGGAGATGAGAAAG+AGG 0.599695 3_3:-79606830 Msa0475910:CDS
TCTCTTCTTCATCTCCGTCG+TGG 0.602523 3_3:+79607542 None:intergenic
AGAATCAAAGGAAGCGTCGG+TGG 0.602647 3_3:+79607462 None:intergenic
GGCGCTGAGCCCAAACGCGA+GGG 0.608307 3_3:+79607132 None:intergenic
GGAAGAATCAAAGGAAGCGT+CGG 0.616525 3_3:+79607459 None:intergenic
TTCACCGGCAACCACCGTGT+TGG 0.618211 3_3:+79607618 None:intergenic
CAATTTACAGGATGATGACG+TGG 0.618285 3_3:-79607345 Msa0475910:intron
CTAATGAATGACTCAGCAAG+TGG 0.621278 3_3:+79606755 None:intergenic
AGGTGCAGAAGACGCCGCAG+TGG 0.632590 3_3:-79606989 Msa0475910:CDS
AGAACTATCTCTTCTCTACC+CGG 0.632934 3_3:-79607279 Msa0475910:CDS
GGGTTCGTTATAAATCAGGT+CGG 0.635663 3_3:-79606923 Msa0475910:CDS
GTCAACGGAGAAATCTTCAC+CGG 0.637583 3_3:+79607603 None:intergenic
TCATCTCCAGCACTTTACGG+TGG 0.643425 3_3:+79606838 None:intergenic
GACCTCCTTGACTTCTCTAA+CGG 0.644071 3_3:-79607580 Msa0475910:CDS
AAAACCCTTTGTAACGCGTG+CGG 0.650760 3_3:-79606945 Msa0475910:CDS
TAGGAGATACTCCACCAACC+CGG 0.658665 3_3:-79606730 Msa0475910:three_prime_UTR
TAACCCGGTTCAAACCGGGT+TGG 0.670817 3_3:+79606716 None:intergenic
AACGGACCGGTTCTCCACTG+CGG 0.699688 3_3:+79606975 None:intergenic
TAGCTTCACCGCCAACACGG+TGG 0.733444 3_3:-79607629 Msa0475910:CDS
CGCCGTTAGAGAAGTCAAGG+AGG 0.737377 3_3:+79607578 None:intergenic
AAGAGGGTCAGTTACAACGA+CGG 0.739560 3_3:-79607025 Msa0475910:CDS
GTGCTAGTCAGCTAGCTAGG+CGG 0.774605 3_3:-79606658 Msa0475910:three_prime_UTR
GGTGATATTCTTCACCACGA+CGG 0.777931 3_3:-79607556 Msa0475910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTGTAAAATATTTTAG+TGG - chr3_3:79607827-79607846 Msa0475910:intron 10.0%
!! TAAATAATTAAAAAGAAGAA+AGG + chr3_3:79607953-79607972 None:intergenic 10.0%
!!! TTTTTTGTAAAATATTTTAG+TGG - chr3_3:79607827-79607846 Msa0475910:intron 10.0%
!! TAAATAATTAAAAAGAAGAA+AGG + chr3_3:79607953-79607972 None:intergenic 10.0%
!! TTTCAATTACTAATACAAAA+CGG + chr3_3:79607145-79607164 None:intergenic 15.0%
!! TTTGTATTAGTAATTGAAAT+TGG - chr3_3:79607146-79607165 Msa0475910:CDS 15.0%
!! TTGTATTAGTAATTGAAATT+GGG - chr3_3:79607147-79607166 Msa0475910:CDS 15.0%
!! TTTCAATTACTAATACAAAA+CGG + chr3_3:79607145-79607164 None:intergenic 15.0%
!! TTTGTATTAGTAATTGAAAT+TGG - chr3_3:79607146-79607165 Msa0475910:CDS 15.0%
!! TTGTATTAGTAATTGAAATT+GGG - chr3_3:79607147-79607166 Msa0475910:CDS 15.0%
!! TGTATTAGTAATTGAAATTG+GGG - chr3_3:79607148-79607167 Msa0475910:CDS 20.0%
!!! TATTTTACAAAAAAGTAACC+CGG + chr3_3:79607821-79607840 None:intergenic 20.0%
!! TAATTAAAAAGAAGAAAGGT+AGG + chr3_3:79607949-79607968 None:intergenic 20.0%
!! TGTATTAGTAATTGAAATTG+GGG - chr3_3:79607148-79607167 Msa0475910:CDS 20.0%
!!! TATTTTACAAAAAAGTAACC+CGG + chr3_3:79607821-79607840 None:intergenic 20.0%
!! TAATTAAAAAGAAGAAAGGT+AGG + chr3_3:79607949-79607968 None:intergenic 20.0%
!! ACTTGACGTTTTATAGTAAA+GGG + chr3_3:79606753-79606772 None:intergenic 25.0%
! TGAAATTGTTTGCAGAAAAA+TGG - chr3_3:79606788-79606807 Msa0475910:CDS 25.0%
! GTATTAGTAATTGAAATTGG+GGG - chr3_3:79607149-79607168 Msa0475910:CDS 25.0%
!! ACTTGACGTTTTATAGTAAA+GGG + chr3_3:79606753-79606772 None:intergenic 25.0%
! TGAAATTGTTTGCAGAAAAA+TGG - chr3_3:79606788-79606807 Msa0475910:CDS 25.0%
! GTATTAGTAATTGAAATTGG+GGG - chr3_3:79607149-79607168 Msa0475910:CDS 25.0%
AATAAGAATCGAAGGAGAAA+CGG + chr3_3:79606657-79606676 None:intergenic 30.0%
AGAAGAAGAATAAGAATCGA+AGG + chr3_3:79606665-79606684 None:intergenic 30.0%
!! TTCTTCTTCTTCTTTTTCAC+AGG - chr3_3:79606678-79606697 Msa0475910:three_prime_UTR 30.0%
! CACTTGACGTTTTATAGTAA+AGG + chr3_3:79606754-79606773 None:intergenic 30.0%
! TTTGAAACCGAGTTTAAGAA+GGG - chr3_3:79606830-79606849 Msa0475910:CDS 30.0%
!! TTTGTTTTTCAGCAAACTCT+CGG - chr3_3:79606855-79606874 Msa0475910:CDS 30.0%
TGAGAAAATGGAAGAATCAA+AGG + chr3_3:79607072-79607091 None:intergenic 30.0%
AAGAAGAAAGGTAGGAAAAT+TGG + chr3_3:79607941-79607960 None:intergenic 30.0%
AATAAGAATCGAAGGAGAAA+CGG + chr3_3:79606657-79606676 None:intergenic 30.0%
AGAAGAAGAATAAGAATCGA+AGG + chr3_3:79606665-79606684 None:intergenic 30.0%
!! TTCTTCTTCTTCTTTTTCAC+AGG - chr3_3:79606678-79606697 Msa0475910:three_prime_UTR 30.0%
! CACTTGACGTTTTATAGTAA+AGG + chr3_3:79606754-79606773 None:intergenic 30.0%
! TTTGAAACCGAGTTTAAGAA+GGG - chr3_3:79606830-79606849 Msa0475910:CDS 30.0%
!! TTTGTTTTTCAGCAAACTCT+CGG - chr3_3:79606855-79606874 Msa0475910:CDS 30.0%
TGAGAAAATGGAAGAATCAA+AGG + chr3_3:79607072-79607091 None:intergenic 30.0%
AAGAAGAAAGGTAGGAAAAT+TGG + chr3_3:79607941-79607960 None:intergenic 30.0%
! CAATCGACGTAGAAGTTTTA+TGG + chr3_3:79606722-79606741 None:intergenic 35.0%
!! CTTTGAAACCGAGTTTAAGA+AGG - chr3_3:79606829-79606848 Msa0475910:CDS 35.0%
ACAAACTCCCTTCTTAAACT+CGG + chr3_3:79606840-79606859 None:intergenic 35.0%
GAGTAATTCGGTTGAGAAAA+TGG + chr3_3:79607084-79607103 None:intergenic 35.0%
AACGAAGAGAGAAAAACTCA+CGG + chr3_3:79607111-79607130 None:intergenic 35.0%
AAATTGGGGGTTCAATTTAC+AGG - chr3_3:79607162-79607181 Msa0475910:CDS 35.0%
!! TGTTGGTTTGAATTTGAACC+GGG + chr3_3:79607261-79607280 None:intergenic 35.0%
!! GTGTTGGTTTGAATTTGAAC+CGG + chr3_3:79607262-79607281 None:intergenic 35.0%
! TTTTCTATTCTTCACGGTTC+TGG + chr3_3:79607362-79607381 None:intergenic 35.0%
! GTTGGGTTTTCTATTCTTCA+CGG + chr3_3:79607368-79607387 None:intergenic 35.0%
!! TTTTTCTTCTGTTTCTTCGC+TGG + chr3_3:79607451-79607470 None:intergenic 35.0%
!!! TAAATCAGGTCGGCTTTTTT+CGG - chr3_3:79607606-79607625 Msa0475910:CDS 35.0%
GAATTTCACTGCTGAAAGTT+GGG + chr3_3:79607651-79607670 None:intergenic 35.0%
TGAATTTCACTGCTGAAAGT+TGG + chr3_3:79607652-79607671 None:intergenic 35.0%
GCTGAGTCATTCATTAGATT+AGG - chr3_3:79607770-79607789 Msa0475910:intron 35.0%
!! AGCAGGTAACGGATATTATT+AGG - chr3_3:79607894-79607913 Msa0475910:five_prime_UTR 35.0%
!! GGTAACGGATATTATTAGGA+AGG - chr3_3:79607898-79607917 Msa0475910:five_prime_UTR 35.0%
! CAATCGACGTAGAAGTTTTA+TGG + chr3_3:79606722-79606741 None:intergenic 35.0%
!! CTTTGAAACCGAGTTTAAGA+AGG - chr3_3:79606829-79606848 Msa0475910:CDS 35.0%
ACAAACTCCCTTCTTAAACT+CGG + chr3_3:79606840-79606859 None:intergenic 35.0%
GAGTAATTCGGTTGAGAAAA+TGG + chr3_3:79607084-79607103 None:intergenic 35.0%
AACGAAGAGAGAAAAACTCA+CGG + chr3_3:79607111-79607130 None:intergenic 35.0%
AAATTGGGGGTTCAATTTAC+AGG - chr3_3:79607162-79607181 Msa0475910:CDS 35.0%
!! TGTTGGTTTGAATTTGAACC+GGG + chr3_3:79607261-79607280 None:intergenic 35.0%
!! GTGTTGGTTTGAATTTGAAC+CGG + chr3_3:79607262-79607281 None:intergenic 35.0%
! TTTTCTATTCTTCACGGTTC+TGG + chr3_3:79607362-79607381 None:intergenic 35.0%
! GTTGGGTTTTCTATTCTTCA+CGG + chr3_3:79607368-79607387 None:intergenic 35.0%
!! TTTTTCTTCTGTTTCTTCGC+TGG + chr3_3:79607451-79607470 None:intergenic 35.0%
!!! TAAATCAGGTCGGCTTTTTT+CGG - chr3_3:79607606-79607625 Msa0475910:CDS 35.0%
GAATTTCACTGCTGAAAGTT+GGG + chr3_3:79607651-79607670 None:intergenic 35.0%
TGAATTTCACTGCTGAAAGT+TGG + chr3_3:79607652-79607671 None:intergenic 35.0%
GCTGAGTCATTCATTAGATT+AGG - chr3_3:79607770-79607789 Msa0475910:intron 35.0%
!! AGCAGGTAACGGATATTATT+AGG - chr3_3:79607894-79607913 Msa0475910:five_prime_UTR 35.0%
!! GGTAACGGATATTATTAGGA+AGG - chr3_3:79607898-79607917 Msa0475910:five_prime_UTR 35.0%
! ATCTTCTGAGAGTGATTGAG+AGG + chr3_3:79607024-79607043 None:intergenic 40.0%
ACGAAGAGAGAAAAACTCAC+GGG + chr3_3:79607110-79607129 None:intergenic 40.0%
! CAATTTACAGGATGATGACG+TGG - chr3_3:79607174-79607193 Msa0475910:CDS 40.0%
GGTAGAGAAGAGATAGTTCT+GGG + chr3_3:79607240-79607259 None:intergenic 40.0%
AGAACTATCTCTTCTCTACC+CGG - chr3_3:79607240-79607259 Msa0475910:CDS 40.0%
!! ATGTTTTTGAGGACACGTGT+TGG + chr3_3:79607278-79607297 None:intergenic 40.0%
AACACGTGTCCTCAAAAACA+TGG - chr3_3:79607277-79607296 Msa0475910:CDS 40.0%
!! TGCTGAGTTCCATGTTTTTG+AGG + chr3_3:79607289-79607308 None:intergenic 40.0%
CAAAAACATGGAACTCAGCA+TGG - chr3_3:79607289-79607308 Msa0475910:CDS 40.0%
TTGTAACTGACCCTCTTCTT+GGG + chr3_3:79607491-79607510 None:intergenic 40.0%
GGGTTCGTTATAAATCAGGT+CGG - chr3_3:79607596-79607615 Msa0475910:CDS 40.0%
!!! GCTTTTTTCGGAGTATAGAC+CGG - chr3_3:79607618-79607637 Msa0475910:CDS 40.0%
TTCTCATCTCCAGCACTTTA+CGG + chr3_3:79607687-79607706 None:intergenic 40.0%
GATGAGAAAGAGGAAAGGAA+TGG - chr3_3:79607699-79607718 Msa0475910:CDS 40.0%
AGAAAGAGGAAAGGAATGGT+TGG - chr3_3:79607703-79607722 Msa0475910:CDS 40.0%
TCAGCAAGTGGTAACCATTT+GGG + chr3_3:79607755-79607774 None:intergenic 40.0%
CTAATGAATGACTCAGCAAG+TGG + chr3_3:79607767-79607786 None:intergenic 40.0%
AAAAGTAACCCGGTTCAAAC+CGG + chr3_3:79607811-79607830 None:intergenic 40.0%
! ATCTTCTGAGAGTGATTGAG+AGG + chr3_3:79607024-79607043 None:intergenic 40.0%
ACGAAGAGAGAAAAACTCAC+GGG + chr3_3:79607110-79607129 None:intergenic 40.0%
! CAATTTACAGGATGATGACG+TGG - chr3_3:79607174-79607193 Msa0475910:CDS 40.0%
GGTAGAGAAGAGATAGTTCT+GGG + chr3_3:79607240-79607259 None:intergenic 40.0%
AGAACTATCTCTTCTCTACC+CGG - chr3_3:79607240-79607259 Msa0475910:CDS 40.0%
!! ATGTTTTTGAGGACACGTGT+TGG + chr3_3:79607278-79607297 None:intergenic 40.0%
AACACGTGTCCTCAAAAACA+TGG - chr3_3:79607277-79607296 Msa0475910:CDS 40.0%
!! TGCTGAGTTCCATGTTTTTG+AGG + chr3_3:79607289-79607308 None:intergenic 40.0%
CAAAAACATGGAACTCAGCA+TGG - chr3_3:79607289-79607308 Msa0475910:CDS 40.0%
TTGTAACTGACCCTCTTCTT+GGG + chr3_3:79607491-79607510 None:intergenic 40.0%
GGGTTCGTTATAAATCAGGT+CGG - chr3_3:79607596-79607615 Msa0475910:CDS 40.0%
!!! GCTTTTTTCGGAGTATAGAC+CGG - chr3_3:79607618-79607637 Msa0475910:CDS 40.0%
TTCTCATCTCCAGCACTTTA+CGG + chr3_3:79607687-79607706 None:intergenic 40.0%
GATGAGAAAGAGGAAAGGAA+TGG - chr3_3:79607699-79607718 Msa0475910:CDS 40.0%
AGAAAGAGGAAAGGAATGGT+TGG - chr3_3:79607703-79607722 Msa0475910:CDS 40.0%
TCAGCAAGTGGTAACCATTT+GGG + chr3_3:79607755-79607774 None:intergenic 40.0%
CTAATGAATGACTCAGCAAG+TGG + chr3_3:79607767-79607786 None:intergenic 40.0%
AAAAGTAACCCGGTTCAAAC+CGG + chr3_3:79607811-79607830 None:intergenic 40.0%
!!! TTTTAGCTTCACCGCCAACA+CGG - chr3_3:79606887-79606906 Msa0475910:CDS 45.0%
GTCAACGGAGAAATCTTCAC+CGG + chr3_3:79606919-79606938 None:intergenic 45.0%
GACCTCCTTGACTTCTCTAA+CGG - chr3_3:79606939-79606958 Msa0475910:CDS 45.0%
GGTGATATTCTTCACCACGA+CGG - chr3_3:79606963-79606982 Msa0475910:CDS 45.0%
! GGAAGAATCAAAGGAAGCGT+CGG + chr3_3:79607063-79607082 None:intergenic 45.0%
ACTCACGGGAACGAGTAATT+CGG + chr3_3:79607096-79607115 None:intergenic 45.0%
GGGTAGAGAAGAGATAGTTC+TGG + chr3_3:79607241-79607260 None:intergenic 45.0%
!! ACAGACGGTGACGGAAAAAA+CGG + chr3_3:79607412-79607431 None:intergenic 45.0%
CCAAAAACAACAGACGGTGA+CGG + chr3_3:79607421-79607440 None:intergenic 45.0%
!!! CGTCACCGTCTGTTGTTTTT+GGG - chr3_3:79607419-79607438 Msa0475910:intron 45.0%
!!! GTCACCGTCTGTTGTTTTTG+GGG - chr3_3:79607420-79607439 Msa0475910:intron 45.0%
!!! TCACCGTCTGTTGTTTTTGG+GGG - chr3_3:79607421-79607440 Msa0475910:intron 45.0%
! TTCTTCTGTTTCTTCGCTGG+TGG + chr3_3:79607448-79607467 None:intergenic 45.0%
GAAACAGAAGAAAAAGCCCG+AGG - chr3_3:79607456-79607475 Msa0475910:CDS 45.0%
GTTGTAACTGACCCTCTTCT+TGG + chr3_3:79607492-79607511 None:intergenic 45.0%
AAGAGGGTCAGTTACAACGA+CGG - chr3_3:79607494-79607513 Msa0475910:CDS 45.0%
!! CAAAGGGTTTTAGCACCCAA+CGG + chr3_3:79607565-79607584 None:intergenic 45.0%
AAAACCCTTTGTAACGCGTG+CGG - chr3_3:79607574-79607593 Msa0475910:CDS 45.0%
TGCGGGGTTCGTTATAAATC+AGG - chr3_3:79607592-79607611 Msa0475910:CDS 45.0%
!! AAGTGCTGGAGATGAGAAAG+AGG - chr3_3:79607689-79607708 Msa0475910:CDS 45.0%
CTGGAGATGAGAAAGAGGAA+AGG - chr3_3:79607694-79607713 Msa0475910:CDS 45.0%
CTCAGCAAGTGGTAACCATT+TGG + chr3_3:79607756-79607775 None:intergenic 45.0%
AAAGTAACCCGGTTCAAACC+GGG + chr3_3:79607810-79607829 None:intergenic 45.0%
!!! TTTTAGCTTCACCGCCAACA+CGG - chr3_3:79606887-79606906 Msa0475910:CDS 45.0%
GTCAACGGAGAAATCTTCAC+CGG + chr3_3:79606919-79606938 None:intergenic 45.0%
GACCTCCTTGACTTCTCTAA+CGG - chr3_3:79606939-79606958 Msa0475910:CDS 45.0%
GGTGATATTCTTCACCACGA+CGG - chr3_3:79606963-79606982 Msa0475910:CDS 45.0%
! GGAAGAATCAAAGGAAGCGT+CGG + chr3_3:79607063-79607082 None:intergenic 45.0%
ACTCACGGGAACGAGTAATT+CGG + chr3_3:79607096-79607115 None:intergenic 45.0%
GGGTAGAGAAGAGATAGTTC+TGG + chr3_3:79607241-79607260 None:intergenic 45.0%
!! ACAGACGGTGACGGAAAAAA+CGG + chr3_3:79607412-79607431 None:intergenic 45.0%
CCAAAAACAACAGACGGTGA+CGG + chr3_3:79607421-79607440 None:intergenic 45.0%
!!! CGTCACCGTCTGTTGTTTTT+GGG - chr3_3:79607419-79607438 Msa0475910:intron 45.0%
!!! GTCACCGTCTGTTGTTTTTG+GGG - chr3_3:79607420-79607439 Msa0475910:intron 45.0%
!!! TCACCGTCTGTTGTTTTTGG+GGG - chr3_3:79607421-79607440 Msa0475910:intron 45.0%
! TTCTTCTGTTTCTTCGCTGG+TGG + chr3_3:79607448-79607467 None:intergenic 45.0%
GAAACAGAAGAAAAAGCCCG+AGG - chr3_3:79607456-79607475 Msa0475910:CDS 45.0%
GTTGTAACTGACCCTCTTCT+TGG + chr3_3:79607492-79607511 None:intergenic 45.0%
AAGAGGGTCAGTTACAACGA+CGG - chr3_3:79607494-79607513 Msa0475910:CDS 45.0%
!! CAAAGGGTTTTAGCACCCAA+CGG + chr3_3:79607565-79607584 None:intergenic 45.0%
AAAACCCTTTGTAACGCGTG+CGG - chr3_3:79607574-79607593 Msa0475910:CDS 45.0%
TGCGGGGTTCGTTATAAATC+AGG - chr3_3:79607592-79607611 Msa0475910:CDS 45.0%
!! AAGTGCTGGAGATGAGAAAG+AGG - chr3_3:79607689-79607708 Msa0475910:CDS 45.0%
CTGGAGATGAGAAAGAGGAA+AGG - chr3_3:79607694-79607713 Msa0475910:CDS 45.0%
CTCAGCAAGTGGTAACCATT+TGG + chr3_3:79607756-79607775 None:intergenic 45.0%
AAAGTAACCCGGTTCAAACC+GGG + chr3_3:79607810-79607829 None:intergenic 45.0%
AGGAGAAACGGCAGTGAAGT+TGG + chr3_3:79606645-79606664 None:intergenic 50.0%
! TTTTCAGCAAACTCTCGGCG+AGG - chr3_3:79606860-79606879 Msa0475910:CDS 50.0%
GAAGTCAAGGAGGTCGTCAA+CGG + chr3_3:79606934-79606953 None:intergenic 50.0%
CTCCTTGACTTCTCTAACGG+CGG - chr3_3:79606942-79606961 Msa0475910:CDS 50.0%
TCTCTTCTTCATCTCCGTCG+TGG + chr3_3:79606980-79606999 None:intergenic 50.0%
!! AGAATCAAAGGAAGCGTCGG+TGG + chr3_3:79607060-79607079 None:intergenic 50.0%
! TTACAGGATGATGACGTGGC+AGG - chr3_3:79607178-79607197 Msa0475910:CDS 50.0%
AAAACCCAACCCTCGCGTTT+GGG - chr3_3:79607378-79607397 Msa0475910:intron 50.0%
!! CAGACGGTGACGGAAAAAAC+GGG + chr3_3:79607411-79607430 None:intergenic 50.0%
!!! CCGTCACCGTCTGTTGTTTT+TGG - chr3_3:79607418-79607437 Msa0475910:intron 50.0%
GGTCCCCCAAAAACAACAGA+CGG + chr3_3:79607427-79607446 None:intergenic 50.0%
AAACCCTTTGTAACGCGTGC+GGG - chr3_3:79607575-79607594 Msa0475910:CDS 50.0%
ACTGCTGAAAGTTGGGCTAC+AGG + chr3_3:79607644-79607663 None:intergenic 50.0%
CAGCACTTTACGGTGGCTAT+TGG + chr3_3:79607677-79607696 None:intergenic 50.0%
CAATAGCCACCGTAAAGTGC+TGG - chr3_3:79607675-79607694 Msa0475910:CDS 50.0%
TCATCTCCAGCACTTTACGG+TGG + chr3_3:79607684-79607703 None:intergenic 50.0%
!! TTTACCGGCTCAGACCCAAA+TGG - chr3_3:79607738-79607757 Msa0475910:intron 50.0%
GTAACCATTTGGGTCTGAGC+CGG + chr3_3:79607745-79607764 None:intergenic 50.0%
TAGGAGATACTCCACCAACC+CGG - chr3_3:79607789-79607808 Msa0475910:intron 50.0%
GTAGTGCTAGTCAGCTAGCT+AGG - chr3_3:79607858-79607877 Msa0475910:five_prime_UTR 50.0%
AGGAGAAACGGCAGTGAAGT+TGG + chr3_3:79606645-79606664 None:intergenic 50.0%
! TTTTCAGCAAACTCTCGGCG+AGG - chr3_3:79606860-79606879 Msa0475910:CDS 50.0%
GAAGTCAAGGAGGTCGTCAA+CGG + chr3_3:79606934-79606953 None:intergenic 50.0%
CTCCTTGACTTCTCTAACGG+CGG - chr3_3:79606942-79606961 Msa0475910:CDS 50.0%
TCTCTTCTTCATCTCCGTCG+TGG + chr3_3:79606980-79606999 None:intergenic 50.0%
!! AGAATCAAAGGAAGCGTCGG+TGG + chr3_3:79607060-79607079 None:intergenic 50.0%
! TTACAGGATGATGACGTGGC+AGG - chr3_3:79607178-79607197 Msa0475910:CDS 50.0%
AAAACCCAACCCTCGCGTTT+GGG - chr3_3:79607378-79607397 Msa0475910:intron 50.0%
!! CAGACGGTGACGGAAAAAAC+GGG + chr3_3:79607411-79607430 None:intergenic 50.0%
!!! CCGTCACCGTCTGTTGTTTT+TGG - chr3_3:79607418-79607437 Msa0475910:intron 50.0%
GGTCCCCCAAAAACAACAGA+CGG + chr3_3:79607427-79607446 None:intergenic 50.0%
AAACCCTTTGTAACGCGTGC+GGG - chr3_3:79607575-79607594 Msa0475910:CDS 50.0%
ACTGCTGAAAGTTGGGCTAC+AGG + chr3_3:79607644-79607663 None:intergenic 50.0%
CAGCACTTTACGGTGGCTAT+TGG + chr3_3:79607677-79607696 None:intergenic 50.0%
CAATAGCCACCGTAAAGTGC+TGG - chr3_3:79607675-79607694 Msa0475910:CDS 50.0%
TCATCTCCAGCACTTTACGG+TGG + chr3_3:79607684-79607703 None:intergenic 50.0%
!! TTTACCGGCTCAGACCCAAA+TGG - chr3_3:79607738-79607757 Msa0475910:intron 50.0%
GTAACCATTTGGGTCTGAGC+CGG + chr3_3:79607745-79607764 None:intergenic 50.0%
TAGGAGATACTCCACCAACC+CGG - chr3_3:79607789-79607808 Msa0475910:intron 50.0%
GTAGTGCTAGTCAGCTAGCT+AGG - chr3_3:79607858-79607877 Msa0475910:five_prime_UTR 50.0%
CGCCGTTAGAGAAGTCAAGG+AGG + chr3_3:79606944-79606963 None:intergenic 55.0%
CACCGCCGTTAGAGAAGTCA+AGG + chr3_3:79606947-79606966 None:intergenic 55.0%
ATGACGTGGCAGGTCTGGAA+TGG - chr3_3:79607188-79607207 Msa0475910:CDS 55.0%
! TGACGTGGCAGGTCTGGAAT+GGG - chr3_3:79607189-79607208 Msa0475910:CDS 55.0%
! CTTCACGGTTCTGGTCTTCG+TGG + chr3_3:79607353-79607372 None:intergenic 55.0%
GAAAACCCAACCCTCGCGTT+TGG - chr3_3:79607377-79607396 Msa0475910:intron 55.0%
GAAAAAGCCCGAGGCTCTTG+AGG - chr3_3:79607465-79607484 Msa0475910:CDS 55.0%
TTCTTGGGCCTCAAGAGCCT+CGG + chr3_3:79607476-79607495 None:intergenic 55.0%
GCTCTTGAGGCCCAAGAAGA+GGG - chr3_3:79607478-79607497 Msa0475910:CDS 55.0%
ACGACGGTGTAGTCATTGCC+AGG - chr3_3:79607510-79607529 Msa0475910:CDS 55.0%
!! GGTTTTAGCACCCAACGGAC+CGG + chr3_3:79607560-79607579 None:intergenic 55.0%
AACCCTTTGTAACGCGTGCG+GGG - chr3_3:79607576-79607595 Msa0475910:CDS 55.0%
AACCCCGCACGCGTTACAAA+GGG + chr3_3:79607581-79607600 None:intergenic 55.0%
CTGAAAGTTGGGCTACAGGC+CGG + chr3_3:79607640-79607659 None:intergenic 55.0%
TTGGGTCTGAGCCGGTAAAC+CGG + chr3_3:79607737-79607756 None:intergenic 55.0%
! TCCACCAACCCGGTTTGAAC+CGG - chr3_3:79607799-79607818 Msa0475910:intron 55.0%
TAACCCGGTTCAAACCGGGT+TGG + chr3_3:79607806-79607825 None:intergenic 55.0%
GTGCTAGTCAGCTAGCTAGG+CGG - chr3_3:79607861-79607880 Msa0475910:five_prime_UTR 55.0%
CGCCGTTAGAGAAGTCAAGG+AGG + chr3_3:79606944-79606963 None:intergenic 55.0%
CACCGCCGTTAGAGAAGTCA+AGG + chr3_3:79606947-79606966 None:intergenic 55.0%
ATGACGTGGCAGGTCTGGAA+TGG - chr3_3:79607188-79607207 Msa0475910:CDS 55.0%
! TGACGTGGCAGGTCTGGAAT+GGG - chr3_3:79607189-79607208 Msa0475910:CDS 55.0%
! CTTCACGGTTCTGGTCTTCG+TGG + chr3_3:79607353-79607372 None:intergenic 55.0%
GAAAACCCAACCCTCGCGTT+TGG - chr3_3:79607377-79607396 Msa0475910:intron 55.0%
GAAAAAGCCCGAGGCTCTTG+AGG - chr3_3:79607465-79607484 Msa0475910:CDS 55.0%
TTCTTGGGCCTCAAGAGCCT+CGG + chr3_3:79607476-79607495 None:intergenic 55.0%
GCTCTTGAGGCCCAAGAAGA+GGG - chr3_3:79607478-79607497 Msa0475910:CDS 55.0%
ACGACGGTGTAGTCATTGCC+AGG - chr3_3:79607510-79607529 Msa0475910:CDS 55.0%
!! GGTTTTAGCACCCAACGGAC+CGG + chr3_3:79607560-79607579 None:intergenic 55.0%
AACCCTTTGTAACGCGTGCG+GGG - chr3_3:79607576-79607595 Msa0475910:CDS 55.0%
AACCCCGCACGCGTTACAAA+GGG + chr3_3:79607581-79607600 None:intergenic 55.0%
CTGAAAGTTGGGCTACAGGC+CGG + chr3_3:79607640-79607659 None:intergenic 55.0%
TTGGGTCTGAGCCGGTAAAC+CGG + chr3_3:79607737-79607756 None:intergenic 55.0%
! TCCACCAACCCGGTTTGAAC+CGG - chr3_3:79607799-79607818 Msa0475910:intron 55.0%
TAACCCGGTTCAAACCGGGT+TGG + chr3_3:79607806-79607825 None:intergenic 55.0%
GTGCTAGTCAGCTAGCTAGG+CGG - chr3_3:79607861-79607880 Msa0475910:five_prime_UTR 55.0%
TAGCTTCACCGCCAACACGG+TGG - chr3_3:79606890-79606909 Msa0475910:CDS 60.0%
TTCACCGGCAACCACCGTGT+TGG + chr3_3:79606904-79606923 None:intergenic 60.0%
! GGATGATGACGTGGCAGGTC+TGG - chr3_3:79607183-79607202 Msa0475910:CDS 60.0%
TGAGCCCAAACGCGAGGGTT+GGG + chr3_3:79607385-79607404 None:intergenic 60.0%
TCTTGGGCCTCAAGAGCCTC+GGG + chr3_3:79607475-79607494 None:intergenic 60.0%
GGCTCTTGAGGCCCAAGAAG+AGG - chr3_3:79607477-79607496 Msa0475910:CDS 60.0%
AAGACGCCGCAGTGGAGAAC+CGG - chr3_3:79607538-79607557 Msa0475910:CDS 60.0%
! AACGGACCGGTTCTCCACTG+CGG + chr3_3:79607547-79607566 None:intergenic 60.0%
CAGTGGAGAACCGGTCCGTT+GGG - chr3_3:79607547-79607566 Msa0475910:CDS 60.0%
GAACCCCGCACGCGTTACAA+AGG + chr3_3:79607582-79607601 None:intergenic 60.0%
GGAATGGTTGGACCGCAACC+CGG - chr3_3:79607715-79607734 Msa0475910:CDS 60.0%
TGGACCGCAACCCGGTTTAC+CGG - chr3_3:79607723-79607742 Msa0475910:intron 60.0%
TGAGCCGGTAAACCGGGTTG+CGG + chr3_3:79607730-79607749 None:intergenic 60.0%
TGGGTCTGAGCCGGTAAACC+GGG + chr3_3:79607736-79607755 None:intergenic 60.0%
! CCACCAACCCGGTTTGAACC+GGG - chr3_3:79607800-79607819 Msa0475910:intron 60.0%
CTAGTCAGCTAGCTAGGCGG+CGG - chr3_3:79607864-79607883 Msa0475910:five_prime_UTR 60.0%
TAGCTTCACCGCCAACACGG+TGG - chr3_3:79606890-79606909 Msa0475910:CDS 60.0%
TTCACCGGCAACCACCGTGT+TGG + chr3_3:79606904-79606923 None:intergenic 60.0%
! GGATGATGACGTGGCAGGTC+TGG - chr3_3:79607183-79607202 Msa0475910:CDS 60.0%
TGAGCCCAAACGCGAGGGTT+GGG + chr3_3:79607385-79607404 None:intergenic 60.0%
TCTTGGGCCTCAAGAGCCTC+GGG + chr3_3:79607475-79607494 None:intergenic 60.0%
GGCTCTTGAGGCCCAAGAAG+AGG - chr3_3:79607477-79607496 Msa0475910:CDS 60.0%
AAGACGCCGCAGTGGAGAAC+CGG - chr3_3:79607538-79607557 Msa0475910:CDS 60.0%
! AACGGACCGGTTCTCCACTG+CGG + chr3_3:79607547-79607566 None:intergenic 60.0%
CAGTGGAGAACCGGTCCGTT+GGG - chr3_3:79607547-79607566 Msa0475910:CDS 60.0%
GAACCCCGCACGCGTTACAA+AGG + chr3_3:79607582-79607601 None:intergenic 60.0%
GGAATGGTTGGACCGCAACC+CGG - chr3_3:79607715-79607734 Msa0475910:CDS 60.0%
TGGACCGCAACCCGGTTTAC+CGG - chr3_3:79607723-79607742 Msa0475910:intron 60.0%
TGAGCCGGTAAACCGGGTTG+CGG + chr3_3:79607730-79607749 None:intergenic 60.0%
TGGGTCTGAGCCGGTAAACC+GGG + chr3_3:79607736-79607755 None:intergenic 60.0%
! CCACCAACCCGGTTTGAACC+GGG - chr3_3:79607800-79607819 Msa0475910:intron 60.0%
CTAGTCAGCTAGCTAGGCGG+CGG - chr3_3:79607864-79607883 Msa0475910:five_prime_UTR 60.0%
ACCGCCAACACGGTGGTTGC+CGG - chr3_3:79606897-79606916 Msa0475910:CDS 65.0%
ACCGGCAACCACCGTGTTGG+CGG + chr3_3:79606901-79606920 None:intergenic 65.0%
CTGAGCCCAAACGCGAGGGT+TGG + chr3_3:79607386-79607405 None:intergenic 65.0%
ACTGCGGCGTCTTCTGCACC+TGG + chr3_3:79607531-79607550 None:intergenic 65.0%
AGGTGCAGAAGACGCCGCAG+TGG - chr3_3:79607530-79607549 Msa0475910:CDS 65.0%
GCAGTGGAGAACCGGTCCGT+TGG - chr3_3:79607546-79607565 Msa0475910:CDS 65.0%
! CCCGGTTCAAACCGGGTTGG+TGG + chr3_3:79607803-79607822 None:intergenic 65.0%
GCGGCAGCAGCAGCAGGTAA+CGG - chr3_3:79607883-79607902 Msa0475910:five_prime_UTR 65.0%
ACCGCCAACACGGTGGTTGC+CGG - chr3_3:79606897-79606916 Msa0475910:CDS 65.0%
ACCGGCAACCACCGTGTTGG+CGG + chr3_3:79606901-79606920 None:intergenic 65.0%
CTGAGCCCAAACGCGAGGGT+TGG + chr3_3:79607386-79607405 None:intergenic 65.0%
ACTGCGGCGTCTTCTGCACC+TGG + chr3_3:79607531-79607550 None:intergenic 65.0%
AGGTGCAGAAGACGCCGCAG+TGG - chr3_3:79607530-79607549 Msa0475910:CDS 65.0%
GCAGTGGAGAACCGGTCCGT+TGG - chr3_3:79607546-79607565 Msa0475910:CDS 65.0%
! CCCGGTTCAAACCGGGTTGG+TGG + chr3_3:79607803-79607822 None:intergenic 65.0%
GCGGCAGCAGCAGCAGGTAA+CGG - chr3_3:79607883-79607902 Msa0475910:five_prime_UTR 65.0%
! GGCGCTGAGCCCAAACGCGA+GGG + chr3_3:79607390-79607409 None:intergenic 70.0%
! GGCGCTGAGCCCAAACGCGA+GGG + chr3_3:79607390-79607409 None:intergenic 70.0%
!! GGGCGCTGAGCCCAAACGCG+AGG + chr3_3:79607391-79607410 None:intergenic 75.0%
TAGGCGGCGGCAGCAGCAGC+AGG - chr3_3:79607877-79607896 Msa0475910:five_prime_UTR 75.0%
!! GGGCGCTGAGCCCAAACGCG+AGG + chr3_3:79607391-79607410 None:intergenic 75.0%
TAGGCGGCGGCAGCAGCAGC+AGG - chr3_3:79607877-79607896 Msa0475910:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 79606545 79607996 79606545 ID=Msa0475910;Name=Msa0475910
chr3_3 mRNA 79606545 79607996 79606545 ID=Msa0475910-mRNA-1;Parent=Msa0475910;Name=Msa0475910-mRNA-1;_AED=0.03;_eAED=0.03;_QI=159|1|1|1|1|1|3|222|297
chr3_3 exon 79606545 79607357 79606545 ID=Msa0475910-mRNA-1:exon:21605;Parent=Msa0475910-mRNA-1
chr3_3 exon 79607432 79607738 79607432 ID=Msa0475910-mRNA-1:exon:21604;Parent=Msa0475910-mRNA-1
chr3_3 exon 79607842 79607996 79607842 ID=Msa0475910-mRNA-1:exon:21603;Parent=Msa0475910-mRNA-1
chr3_3 five_prime_UTR 79607842 79607996 79607842 ID=Msa0475910-mRNA-1:five_prime_utr;Parent=Msa0475910-mRNA-1
chr3_3 five_prime_UTR 79607735 79607738 79607735 ID=Msa0475910-mRNA-1:five_prime_utr;Parent=Msa0475910-mRNA-1
chr3_3 CDS 79607432 79607734 79607432 ID=Msa0475910-mRNA-1:cds;Parent=Msa0475910-mRNA-1
chr3_3 CDS 79606767 79607357 79606767 ID=Msa0475910-mRNA-1:cds;Parent=Msa0475910-mRNA-1
chr3_3 three_prime_UTR 79606545 79606766 79606545 ID=Msa0475910-mRNA-1:three_prime_utr;Parent=Msa0475910-mRNA-1
Gene Sequence

>Msa0475910

ATGGAGTTTGCAGTAGCAAAAGCTTTGAAACCGAGTTTAAGAAGGGAGTTTGTTTTTCAGCAAACTCTCGGCGAGGAACTTTTTAGCTTCACCGCCAACACGGTGGTTGCCGGTGAAGATTTCTCCGTTGACGACCTCCTTGACTTCTCTAACGGCGGTGATATTCTTCACCACGACGGAGATGAAGAAGAGAAAGATAGCAGTTTATCTCTTTCCTCTCAATCACTCTCAGAAGATAACAACTCAAATTCCACCGACGCTTCCTTTGATTCTTCCATTTTCTCAACCGAATTACTCGTTCCCGATGATGACGTGGCAGGTCTGGAATGGGTTTCACACTTTGTAGATGATTCTCTCCCAGAACTATCTCTTCTCTACCCGGTTCAAATTCAAACCAACACGTGTCCTCAAAAACATGGAACTCAGCATGGAAAAACTTTACGTTTTTCAACTGAAAAAATGAAAATTACCACGAAGACCAGAACCGTGAAGAATAGAAAACCCAACCCTCGCGTTTGGGCTCAGCGCCCGTTTTTTCCGTCACCGTCTGTTGTTTTTGGGGGACCACCAGCGAAGAAACAGAAGAAAAAGCCCGAGGCTCTTGAGGCCCAAGAAGAGGGTCAGTTACAACGACGGTGTAGTCATTGCCAGGTGCAGAAGACGCCGCAGTGGAGAACCGGTCCGTTGGGTGCTAAAACCCTTTGTAACGCGTGCGGGGTTCGTTATAAATCAGGTCGGCTTTTTTCGGAGTATAGACCGGCCTGTAGCCCAACTTTCAGCAGTGAAATTCATTCCAATAGCCACCGTAAAGTGCTGGAGATGAGAAAGAGGAAAGGAATGGTTGGACCGCAACCCGGTTTACCGGCTCAGACCCAAATGGTTACCACTTGCTGA
Protein sequence

>Msa0475910

MEFAVAKALKPSLRREFVFQQTLGEELFSFTANTVVAGEDFSVDDLLDFSNGGDILHHDGDEEEKDSSLSLSSQSLSEDNNSNSTDASFDSSIFSTELLVPDDDVAGLEWVSHFVDDSLPELSLLYPVQIQTNTCPQKHGTQHGKTLRFSTEKMKITTKTRTVKNRKPNPRVWAQRPFFPSPSVVFGGPPAKKQKKKPEALEAQEEGQLQRRCSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFSEYRPACSPTFSSEIHSNSHRKVLEMRKRKGMVGPQPGLPAQTQMVTTC*