Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477410 | XP_003603582.1 | 98.405 | 439 | 7 | 0 | 1 | 439 | 1 | 439 | 0.0 | 867 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477410 | G7J2W4 | 98.405 | 439 | 7 | 0 | 1 | 439 | 1 | 439 | 0.0 | 867 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072170 | Msa0477410 | 0.808699 | 2.724669e-50 | -8.615850e-47 |
| Msa0120540 | Msa0477410 | 0.804017 | 2.643009e-49 | -8.615850e-47 |
| Msa0477410 | Msa1416120 | 0.817509 | 3.178809e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477410 | MtrunA17_Chr3g0139321 | 98.405 | 439 | 7 | 0 | 1 | 439 | 1 | 439 | 0.0 | 867 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477410 | AT4G31340.1 | 58.680 | 409 | 163 | 4 | 31 | 439 | 35 | 437 | 1.45e-165 | 473 |
| Msa0477410 | AT2G24420.1 | 54.779 | 429 | 183 | 5 | 17 | 439 | 17 | 440 | 6.75e-161 | 461 |
| Msa0477410 | AT2G24420.2 | 54.779 | 429 | 183 | 5 | 17 | 439 | 17 | 440 | 6.75e-161 | 461 |
| Msa0477410 | AT4G31340.2 | 58.701 | 385 | 155 | 2 | 31 | 415 | 35 | 415 | 1.41e-155 | 447 |
| Msa0477410 | AT4G30090.1 | 30.123 | 405 | 214 | 7 | 40 | 437 | 44 | 386 | 4.10e-51 | 177 |
Find 133 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAATTGAGTTGATCTAAT+TGG | 0.198323 | 3_3:-81600495 | None:intergenic |
| AAGAATAAACCAAATGAAAA+AGG | 0.209802 | 3_3:-81606962 | None:intergenic |
| AAGTAACGAAGGAGAAAATT+AGG | 0.226102 | 3_3:-81600423 | None:intergenic |
| AAGAAGGCTGTTCTCGCTTA+TGG | 0.233585 | 3_3:+81603591 | Msa0477410:CDS |
| AAAAGGCACAAGCTGGAAAA+TGG | 0.236033 | 3_3:+81602970 | Msa0477410:CDS |
| GCTTGGGTGTTCATGTATTA+TGG | 0.251059 | 3_3:+81606740 | Msa0477410:three_prime_UTR |
| ACTCTAGCTATTAAGATAAT+AGG | 0.265678 | 3_3:-81605152 | None:intergenic |
| TATGCAGGCCTCTGCCCTTC+TGG | 0.268328 | 3_3:+81605124 | Msa0477410:intron |
| GAAACTTATACCTGATAATA+AGG | 0.301355 | 3_3:-81603409 | None:intergenic |
| CATATAAAGGTGGTGGATAT+TGG | 0.311438 | 3_3:-81600074 | None:intergenic |
| AACACAAGAATTGAAGAAAA+AGG | 0.318070 | 3_3:+81600822 | Msa0477410:CDS |
| TTGGATTGATACCGAGGAAT+TGG | 0.318579 | 3_3:-81600522 | None:intergenic |
| GAATGAGGTTGCTTCTCTTC+AGG | 0.323946 | 3_3:+81600909 | Msa0477410:CDS |
| TCTCGCTTATGGGAATTTCT+TGG | 0.329095 | 3_3:+81603602 | Msa0477410:CDS |
| ATTCTAGGCCCTAGAGAAAA+AGG | 0.331966 | 3_3:+81602953 | Msa0477410:intron |
| ACCTCTTGCTACTAAAGAAT+TGG | 0.345133 | 3_3:+81605001 | Msa0477410:CDS |
| GAATGCTACTCAACTTATCT+TGG | 0.345760 | 3_3:-81600876 | None:intergenic |
| ATCTAAGACTAACCAGAAAA+TGG | 0.347393 | 3_3:-81605183 | None:intergenic |
| AGCTTTGTTGGCGGTGTTGA+TGG | 0.364823 | 3_3:+81600363 | Msa0477410:exon |
| ATTCATGGTTTATTCTTTGT+TGG | 0.369797 | 3_3:+81606925 | Msa0477410:three_prime_UTR |
| CTTCATGTTATCTACTTGTC+TGG | 0.380045 | 3_3:-81605413 | None:intergenic |
| TTCTGTATCTTGCAGATGGC+TGG | 0.383427 | 3_3:+81606610 | Msa0477410:intron |
| ATGGTGCTTGGCTTCCTCCT+TGG | 0.385003 | 3_3:+81602611 | Msa0477410:CDS |
| TATCATCTGCAGCAGCAAAA+AGG | 0.397213 | 3_3:+81605328 | Msa0477410:intron |
| ATCACACAGAAACTGATTCA+TGG | 0.400074 | 3_3:+81606910 | Msa0477410:three_prime_UTR |
| ATGTGTAGATCCTTATTATC+AGG | 0.406758 | 3_3:+81603399 | Msa0477410:CDS |
| AATCTTGATACCAAACCCTT+TGG | 0.421657 | 3_3:+81600262 | Msa0477410:five_prime_UTR |
| ATAGTACAGACAACCGGAAT+AGG | 0.424295 | 3_3:-81606881 | None:intergenic |
| TAGATTTAGAGCGCCTATTC+CGG | 0.428852 | 3_3:+81606868 | Msa0477410:three_prime_UTR |
| GATACCGAGGAATTGGATCT+TGG | 0.433047 | 3_3:-81600515 | None:intergenic |
| GGACGTTTCACTGTAGAGTT+GGG | 0.436568 | 3_3:+81606706 | Msa0477410:three_prime_UTR |
| TTAGTTAACTTGATGATTTG+TGG | 0.439041 | 3_3:+81607039 | Msa0477410:three_prime_UTR |
| AGAAGGCTGTTCTCGCTTAT+GGG | 0.441229 | 3_3:+81603592 | Msa0477410:CDS |
| GTCATTGGATGCCGAGGAGC+AGG | 0.448017 | 3_3:+81601104 | Msa0477410:CDS |
| TTGCAGATGGCTGGCACATG+TGG | 0.454398 | 3_3:+81606619 | Msa0477410:intron |
| GGGAGCAAGTGCGTCCTTTG+AGG | 0.460893 | 3_3:-81603356 | None:intergenic |
| AGAAAGTGAACTGGGAATCT+CGG | 0.463402 | 3_3:+81601286 | Msa0477410:CDS |
| AAAGGCACAAGCTGGAAAAT+GGG | 0.463620 | 3_3:+81602971 | Msa0477410:CDS |
| TGCAGATGGCTGGCACATGT+GGG | 0.465313 | 3_3:+81606620 | Msa0477410:intron |
| GACCACTGTTCTTTCACAGC+TGG | 0.466702 | 3_3:-81603265 | None:intergenic |
| GTTGGAAGTGATATCTCAAA+AGG | 0.468095 | 3_3:+81602786 | Msa0477410:CDS |
| TAAAGAATTGGAATGGTTTG+CGG | 0.470283 | 3_3:+81605013 | Msa0477410:CDS |
| CAGTGCTTGCACATGAGGTT+CGG | 0.473641 | 3_3:-81603305 | None:intergenic |
| TAGCAAGCCATACATTGATC+AGG | 0.474392 | 3_3:+81603509 | Msa0477410:CDS |
| AGTAACGAAGGAGAAAATTA+GGG | 0.474409 | 3_3:-81600422 | None:intergenic |
| AGTCCGTGGCTGAGAGTCAT+TGG | 0.476512 | 3_3:+81602743 | Msa0477410:intron |
| AAAACAGTGAGAAAGTGAAC+TGG | 0.480727 | 3_3:+81601277 | Msa0477410:CDS |
| GTTGGGCGCACAATATTGCT+TGG | 0.488255 | 3_3:+81606723 | Msa0477410:three_prime_UTR |
| TCCGAACGAAGCTTTGTTGG+CGG | 0.488781 | 3_3:+81600354 | Msa0477410:five_prime_UTR |
| AATAAACATATACTTGAAAG+TGG | 0.489711 | 3_3:-81606846 | None:intergenic |
| AGGACGTTTCACTGTAGAGT+TGG | 0.493477 | 3_3:+81606705 | Msa0477410:three_prime_UTR |
| GAAGTCAGTGCTTGCACATG+AGG | 0.495088 | 3_3:-81603310 | None:intergenic |
| CTGCATATTTATTTGAACGT+GGG | 0.495385 | 3_3:+81606644 | Msa0477410:three_prime_UTR |
| AACATAAAAGAGTGAGTACC+AGG | 0.495735 | 3_3:-81606783 | None:intergenic |
| TTGGGCGCACAATATTGCTT+GGG | 0.503496 | 3_3:+81606724 | Msa0477410:three_prime_UTR |
| TGTACACTATATTCGTAGTA+AGG | 0.505415 | 3_3:+81602639 | Msa0477410:CDS |
| AGAACAGCCTTCTTTGTGTA+GGG | 0.506848 | 3_3:-81603582 | None:intergenic |
| GAAAGTGAACTGGGAATCTC+GGG | 0.506911 | 3_3:+81601287 | Msa0477410:CDS |
| CATTCAATCCTTGCAGAATG+AGG | 0.508270 | 3_3:+81600894 | Msa0477410:CDS |
| ATGATCAGACTCATGGTGCT+TGG | 0.513875 | 3_3:+81602599 | Msa0477410:intron |
| ACGTCTCTTGGACAGTAGCT+TGG | 0.519002 | 3_3:-81604956 | None:intergenic |
| GTTATATTTGTTATTAAACC+TGG | 0.519899 | 3_3:+81606765 | Msa0477410:three_prime_UTR |
| TTGCTACTAAAGAATTGGAA+TGG | 0.520379 | 3_3:+81605006 | Msa0477410:CDS |
| TATTTAGGAAGAAATGTTGA+AGG | 0.522472 | 3_3:+81602206 | Msa0477410:intron |
| AAACTTATAGTACAGACAAC+CGG | 0.522653 | 3_3:-81606887 | None:intergenic |
| ACCGCCAACAAAGCTTCGTT+CGG | 0.522762 | 3_3:-81600355 | None:intergenic |
| AAAGGAACATATAAAGGTGG+TGG | 0.525507 | 3_3:-81600081 | None:intergenic |
| ACAAGTAGATAACATGAAGT+TGG | 0.525848 | 3_3:+81605417 | Msa0477410:exon |
| AGATAATAGGCAAGGCCAGA+AGG | 0.525870 | 3_3:-81605139 | None:intergenic |
| TCCAATTCTTTAGTAGCAAG+AGG | 0.528573 | 3_3:-81605002 | None:intergenic |
| AGCCACTGCATATCATCGCC+AGG | 0.534905 | 3_3:+81603629 | Msa0477410:CDS |
| GTAGCGACCTGATCAATGTA+TGG | 0.537102 | 3_3:-81603516 | None:intergenic |
| AGCTTTACGACGAGTGTGGT+GGG | 0.538967 | 3_3:-81605378 | None:intergenic |
| GCAGATGGCTGGCACATGTG+GGG | 0.542728 | 3_3:+81606621 | Msa0477410:intron |
| TGCCGGTGAACTACAGAAGC+AGG | 0.548974 | 3_3:+81601146 | Msa0477410:CDS |
| AGGCAAGGCCAGAAGGGCAG+AGG | 0.549576 | 3_3:-81605132 | None:intergenic |
| TGAACATGGGAAGCCTCTGT+TGG | 0.550076 | 3_3:+81602768 | Msa0477410:CDS |
| GGAAAGGCTCATGCACGTGC+CGG | 0.552710 | 3_3:+81601129 | Msa0477410:CDS |
| GATAACATGAAGTTGGCTCC+TGG | 0.552779 | 3_3:+81605424 | Msa0477410:exon |
| GAGAGTCATTGGAATGAACA+TGG | 0.556843 | 3_3:+81602754 | Msa0477410:CDS |
| TTTCTCCTTCGTTACTTCCG+AGG | 0.559854 | 3_3:+81600429 | Msa0477410:CDS |
| TGCATATTTATTTGAACGTG+GGG | 0.560632 | 3_3:+81606645 | Msa0477410:three_prime_UTR |
| CTTGATGATTTGTGGTTCAG+TGG | 0.561068 | 3_3:+81607047 | Msa0477410:three_prime_UTR |
| AAAAGAGTGTCGTGTGGCTG+AGG | 0.562485 | 3_3:-81600035 | None:intergenic |
| TGCCGAGGAGCAGGTTGGAA+AGG | 0.563199 | 3_3:+81601113 | Msa0477410:CDS |
| GAGAACAGCCTTCTTTGTGT+AGG | 0.563777 | 3_3:-81603583 | None:intergenic |
| ACAGGTTCAAAAGATAAATG+AGG | 0.567365 | 3_3:+81602039 | Msa0477410:intron |
| TAGCTTTACGACGAGTGTGG+TGG | 0.567556 | 3_3:-81605379 | None:intergenic |
| GATAATAGGCAAGGCCAGAA+GGG | 0.576847 | 3_3:-81605138 | None:intergenic |
| ATAGCGAAGACGAAAAGCTT+CGG | 0.580873 | 3_3:-81600391 | None:intergenic |
| GACCTGCTTCTGTAGTTCAC+CGG | 0.583896 | 3_3:-81601148 | None:intergenic |
| TCTGAAGCCCTACACAAAGA+AGG | 0.584013 | 3_3:+81603575 | Msa0477410:CDS |
| TGGGTGTTTCCACTTCGAGC+GGG | 0.584384 | 3_3:-81605359 | None:intergenic |
| GCTGCATATTTATTTGAACG+TGG | 0.585457 | 3_3:+81606643 | Msa0477410:three_prime_UTR |
| GCTTAGCTTTACGACGAGTG+TGG | 0.588964 | 3_3:-81605382 | None:intergenic |
| AATTCCAAGATCCAATTCCT+CGG | 0.589768 | 3_3:+81600511 | Msa0477410:CDS |
| AAAATGGGCTGAACCTCACG+TGG | 0.592865 | 3_3:+81602986 | Msa0477410:CDS |
| ACTTGCTCCCCACTTGAACA+AGG | 0.596960 | 3_3:+81603369 | Msa0477410:CDS |
| AGCCTTTCCAACCTGCTCCT+CGG | 0.598082 | 3_3:-81601115 | None:intergenic |
| TGAGATATCACTTCCAACAG+AGG | 0.601782 | 3_3:-81602781 | None:intergenic |
| AGCTATTAAGATAATAGGCA+AGG | 0.602545 | 3_3:-81605147 | None:intergenic |
| ACTTGTATATTCTCAACATG+AGG | 0.604598 | 3_3:-81603549 | None:intergenic |
| GCAAGTAAACCCGCTCGAAG+TGG | 0.604975 | 3_3:+81605350 | Msa0477410:CDS |
| TGAAGTTTACAAGTCCTCAA+AGG | 0.607940 | 3_3:+81603342 | Msa0477410:CDS |
| GAAGGAGAAAATTAGGGCAA+CGG | 0.609746 | 3_3:-81600416 | None:intergenic |
| TTGGATGCCGAGGAGCAGGT+TGG | 0.613773 | 3_3:+81601108 | Msa0477410:CDS |
| AAAGAGTGTCGTGTGGCTGA+GGG | 0.618684 | 3_3:-81600034 | None:intergenic |
| AGAGGAATCAGAATCTTCGA+TGG | 0.619773 | 3_3:-81600461 | None:intergenic |
| AAAAGGGTCATTGGATGCCG+AGG | 0.621224 | 3_3:+81601098 | Msa0477410:CDS |
| TGATTTGAACTCAAAACTAG+AGG | 0.624974 | 3_3:+81601335 | Msa0477410:CDS |
| AAACAGTGAGAAAGTGAACT+GGG | 0.625922 | 3_3:+81601278 | Msa0477410:CDS |
| AATGTTGAAGGCAAAGCTAG+AGG | 0.629492 | 3_3:+81602218 | Msa0477410:CDS |
| GTGGGTGTTTCCACTTCGAG+CGG | 0.630465 | 3_3:-81605360 | None:intergenic |
| TTCGATGGAAACATCGACCT+CGG | 0.634140 | 3_3:-81600446 | None:intergenic |
| CATTGATCAGGTCGCTACTG+CGG | 0.635282 | 3_3:+81603521 | Msa0477410:CDS |
| TAATTGGATCTTAAGAGCAG+AGG | 0.640351 | 3_3:-81600479 | None:intergenic |
| AGAAGCAACCTCATTCTGCA+AGG | 0.645724 | 3_3:-81600902 | None:intergenic |
| TAAAGTGAGATCTAAACATG+TGG | 0.647367 | 3_3:-81599939 | None:intergenic |
| TCATGTTGAGAATATACAAG+TGG | 0.650587 | 3_3:+81603551 | Msa0477410:CDS |
| ATCGACCTCGGAAGTAACGA+AGG | 0.651869 | 3_3:-81600434 | None:intergenic |
| ACGTGCTCTTAAAGTTGCCG+AGG | 0.655385 | 3_3:+81602090 | Msa0477410:CDS |
| ATTCCAATGACTCTCAGCCA+CGG | 0.657274 | 3_3:-81602746 | None:intergenic |
| ATATAGTGTACAGCAAGCCA+AGG | 0.657714 | 3_3:-81602628 | None:intergenic |
| GGTGTTAATGATCAGACTCA+TGG | 0.658662 | 3_3:+81602592 | Msa0477410:intron |
| TAGTGTACAGCAAGCCAAGG+AGG | 0.659126 | 3_3:-81602625 | None:intergenic |
| GCGAAGACGAAAAGCTTCGG+AGG | 0.668584 | 3_3:-81600388 | None:intergenic |
| AGAGTCATTGGAATGAACAT+GGG | 0.671207 | 3_3:+81602755 | Msa0477410:CDS |
| GTGGTCTGTGGTGAAAACAA+AGG | 0.688492 | 3_3:+81603282 | Msa0477410:CDS |
| CAAAGCAAAAGAGCTGAGCG+AGG | 0.693194 | 3_3:+81602248 | Msa0477410:CDS |
| AACCTGGCGATGATATGCAG+TGG | 0.697941 | 3_3:-81603631 | None:intergenic |
| TGTGAAAGAACAGTGGTCTG+TGG | 0.702105 | 3_3:+81603270 | Msa0477410:CDS |
| TTCCAGCTGTGAAAGAACAG+TGG | 0.708355 | 3_3:+81603263 | Msa0477410:CDS |
| ACTCGTCGTAAAGCTAAGCG+AGG | 0.711196 | 3_3:+81605386 | Msa0477410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTATATTTTTTTTTTTTTTG+AGG | + | chr3_3:81599977-81599996 | Msa0477410:five_prime_UTR | 10.0% |
| !!! | ATATTTTTTTTTTTTTTGAG+GGG | + | chr3_3:81599979-81599998 | Msa0477410:five_prime_UTR | 10.0% |
| !!! | GAAAAAATAATAATTTTGAA+GGG | - | chr3_3:81601071-81601090 | None:intergenic | 10.0% |
| !! | GTTGAAAAAAATAATTAATT+AGG | - | chr3_3:81604028-81604047 | None:intergenic | 10.0% |
| !!! | AAAATATAATAGTAGTTTTA+TGG | + | chr3_3:81604096-81604115 | Msa0477410:intron | 10.0% |
| !!! | TTAGTTTTGTAATTTTTTAT+AGG | + | chr3_3:81604290-81604309 | Msa0477410:intron | 10.0% |
| !!! | TAGTTTTGTAATTTTTTATA+GGG | + | chr3_3:81604291-81604310 | Msa0477410:intron | 10.0% |
| !! | TTATTACTAAAATATAAACA+TGG | + | chr3_3:81605068-81605087 | Msa0477410:intron | 10.0% |
| !! | ATTAAAAAAGGAACATATAA+AGG | - | chr3_3:81600090-81600109 | None:intergenic | 15.0% |
| !! | AGTTCATAAAAAAAAAAACT+TGG | - | chr3_3:81600632-81600651 | None:intergenic | 15.0% |
| !!! | GGAAAAAATAATAATTTTGA+AGG | - | chr3_3:81601072-81601091 | None:intergenic | 15.0% |
| !! | AAGTAAAATATAAATGAACT+AGG | - | chr3_3:81601527-81601546 | None:intergenic | 15.0% |
| !!! | CTTAATTTTTTTTCATTAAG+TGG | - | chr3_3:81601905-81601924 | None:intergenic | 15.0% |
| !!! | TATCAAAACATAATTTTGTT+AGG | + | chr3_3:81601988-81602007 | Msa0477410:intron | 15.0% |
| !!! | TTCTATTGATATTCTTATTT+AGG | + | chr3_3:81602191-81602210 | Msa0477410:intron | 15.0% |
| !!! | ATATAAGGAATTTTTTTACT+AGG | - | chr3_3:81602469-81602488 | None:intergenic | 15.0% |
| !!! | TTATTTTATAGTAAACTATC+AGG | - | chr3_3:81602519-81602538 | None:intergenic | 15.0% |
| !! | ATTCAAAAAAATAATACAAG+AGG | - | chr3_3:81603696-81603715 | None:intergenic | 15.0% |
| !!! | TCTTGTATTATTTTTTTGAA+TGG | + | chr3_3:81603695-81603714 | Msa0477410:intron | 15.0% |
| !!! | ATTCTTATATTTGTTGAAAA+AGG | - | chr3_3:81604071-81604090 | None:intergenic | 15.0% |
| !! | AAAAAATTACAAAACTAAGA+AGG | - | chr3_3:81604288-81604307 | None:intergenic | 15.0% |
| !! | AAAAAAAAACAATTCAGTAT+GGG | - | chr3_3:81605229-81605248 | None:intergenic | 15.0% |
| !!! | TGTAGATCTAATTTTTTATT+TGG | + | chr3_3:81605660-81605679 | Msa0477410:intron | 15.0% |
| !!! | GTAGATCTAATTTTTTATTT+GGG | + | chr3_3:81605661-81605680 | Msa0477410:intron | 15.0% |
| !!! | TAGATCTAATTTTTTATTTG+GGG | + | chr3_3:81605662-81605681 | Msa0477410:intron | 15.0% |
| !! | TTCAAATCATCTAAAAAGAA+AGG | + | chr3_3:81600222-81600241 | Msa0477410:five_prime_UTR | 20.0% |
| !!! | AATTATGATAACTGAGATTT+TGG | - | chr3_3:81600544-81600563 | None:intergenic | 20.0% |
| !! | AAATGCTTCAAAAATAATAC+AGG | - | chr3_3:81600993-81601012 | None:intergenic | 20.0% |
| !!! | GTATTATTTTTGAAGCATTT+TGG | + | chr3_3:81600993-81601012 | Msa0477410:intron | 20.0% |
| !!! | TTATTTTTTCCTCAGAAAAA+AGG | + | chr3_3:81601081-81601100 | Msa0477410:intron | 20.0% |
| !!! | TATTTTTTCCTCAGAAAAAA+GGG | + | chr3_3:81601082-81601101 | Msa0477410:intron | 20.0% |
| !!! | TTTTTTTTCATTAAGTGGTT+AGG | - | chr3_3:81601900-81601919 | None:intergenic | 20.0% |
| !! | AATAAACTGACATTATTAGA+TGG | - | chr3_3:81601969-81601988 | None:intergenic | 20.0% |
| !! | TAAAAAGATTACATGGTTTA+GGG | - | chr3_3:81602294-81602313 | None:intergenic | 20.0% |
| !! | TTAAAAAGATTACATGGTTT+AGG | - | chr3_3:81602295-81602314 | None:intergenic | 20.0% |
| !! | CAACATTTAAAAAGATTACA+TGG | - | chr3_3:81602301-81602320 | None:intergenic | 20.0% |
| !!! | ATAATCATGGATAACTTTTA+AGG | - | chr3_3:81602339-81602358 | None:intergenic | 20.0% |
| !! | TTCATCTATATACAAGAAAA+TGG | - | chr3_3:81602413-81602432 | None:intergenic | 20.0% |
| !! | TTCCTTATATTATGTGATAT+TGG | + | chr3_3:81602479-81602498 | Msa0477410:intron | 20.0% |
| !! | TACCAATATCACATAATATA+AGG | - | chr3_3:81602484-81602503 | None:intergenic | 20.0% |
| !!! | TATTATGTGATATTGGTAAT+TGG | + | chr3_3:81602486-81602505 | Msa0477410:intron | 20.0% |
| !! | ATAAAATAAACTATCAGACA+AGG | + | chr3_3:81602530-81602549 | Msa0477410:intron | 20.0% |
| !!! | TTTTATTAATTGATGCTTAC+TGG | + | chr3_3:81602571-81602590 | Msa0477410:intron | 20.0% |
| !! | ATTATTAGATGATGTGAATA+AGG | - | chr3_3:81602705-81602724 | None:intergenic | 20.0% |
| !! | AGATAAATATGATAGACTTA+CGG | - | chr3_3:81603024-81603043 | None:intergenic | 20.0% |
| !! | AGCAGAAATATATAAATAGT+AGG | - | chr3_3:81603670-81603689 | None:intergenic | 20.0% |
| !! | AAATGTTAGTAATTAGTTGT+TGG | + | chr3_3:81603719-81603738 | Msa0477410:intron | 20.0% |
| !!! | ATCCAGAAATTTTAATAAGT+GGG | + | chr3_3:81603858-81603877 | Msa0477410:intron | 20.0% |
| !! | ACAATAATACTGTATAAGTA+GGG | + | chr3_3:81604335-81604354 | Msa0477410:intron | 20.0% |
| !!! | AGATTCTATTTTCAATTATC+TGG | - | chr3_3:81604566-81604585 | None:intergenic | 20.0% |
| !! | ACTAAAATATAAACATGGTT+AGG | + | chr3_3:81605073-81605092 | Msa0477410:intron | 20.0% |
| !! | ATATCAAATTGAAATTATGC+AGG | + | chr3_3:81605109-81605128 | Msa0477410:intron | 20.0% |
| !! | GAAAAAAAAACAATTCAGTA+TGG | - | chr3_3:81605230-81605249 | None:intergenic | 20.0% |
| !! | CTTGCAAAATAAAAAATTCA+AGG | - | chr3_3:81605607-81605626 | None:intergenic | 20.0% |
| !! | AATATACTCTTCTAATCAAA+TGG | - | chr3_3:81606217-81606236 | None:intergenic | 20.0% |
| !!! | TTGATTAGAAGAGTATATTT+AGG | + | chr3_3:81606218-81606237 | Msa0477410:intron | 20.0% |
| !!! | AATATTTTTCTCAAACGTTT+TGG | - | chr3_3:81606245-81606264 | None:intergenic | 20.0% |
| !! | TTTAAACAGAGAAAATGAAA+TGG | - | chr3_3:81606305-81606324 | None:intergenic | 20.0% |
| !!! | TTCATTTTCTCTGTTTAAAT+AGG | + | chr3_3:81606306-81606325 | Msa0477410:intron | 20.0% |
| !!! | TAATTTTGTTTCCTTTTTCA+AGG | - | chr3_3:81606343-81606362 | None:intergenic | 20.0% |
| !!! | GTTATATTTGTTATTAAACC+TGG | + | chr3_3:81606765-81606784 | Msa0477410:three_prime_UTR | 20.0% |
| !! | AATAAACATATACTTGAAAG+TGG | - | chr3_3:81606849-81606868 | None:intergenic | 20.0% |
| !! | AGAATAAACCAAATGAAAAA+GGG | - | chr3_3:81606964-81606983 | None:intergenic | 20.0% |
| !! | AAGAATAAACCAAATGAAAA+AGG | - | chr3_3:81606965-81606984 | None:intergenic | 20.0% |
| ! | AAAAAAGGAACATATAAAGG+TGG | - | chr3_3:81600087-81600106 | None:intergenic | 25.0% |
| ! | TCAATTAGTTGAAATTACTG+AGG | + | chr3_3:81600691-81600710 | Msa0477410:intron | 25.0% |
| !! | AATTACTGAGGAAATTTTTG+TGG | + | chr3_3:81600703-81600722 | Msa0477410:intron | 25.0% |
| ! | GGCTAGTAATTTACAAATTT+AGG | + | chr3_3:81600724-81600743 | Msa0477410:intron | 25.0% |
| ! | CTTCAAAACAAAACATGTAT+TGG | - | chr3_3:81600783-81600802 | None:intergenic | 25.0% |
| ! | AACACAAGAATTGAAGAAAA+AGG | + | chr3_3:81600822-81600841 | Msa0477410:CDS | 25.0% |
| !!! | TTAGGGATTTTTCAATCATT+AGG | + | chr3_3:81600958-81600977 | Msa0477410:intron | 25.0% |
| ! | TTTAAGCAAATAACAAGAAG+TGG | - | chr3_3:81601048-81601067 | None:intergenic | 25.0% |
| !! | ATGAATCTTTTTCTCTAACT+TGG | - | chr3_3:81601316-81601335 | None:intergenic | 25.0% |
| !! | TGAAGTAAATCTGAGTTTTA+TGG | + | chr3_3:81601399-81601418 | Msa0477410:intron | 25.0% |
| ! | TATTTAGGAAGAAATGTTGA+AGG | + | chr3_3:81602206-81602225 | Msa0477410:intron | 25.0% |
| ! | AAAAAGATTACATGGTTTAG+GGG | - | chr3_3:81602293-81602312 | None:intergenic | 25.0% |
| ! | TCTTGTATATAGATGAATGA+AGG | + | chr3_3:81602416-81602435 | Msa0477410:intron | 25.0% |
| ! | CTTCAATAAATTATAGATCC+AGG | + | chr3_3:81602858-81602877 | Msa0477410:intron | 25.0% |
| !! | CTTTCATACTTTTGATCTTT+AGG | + | chr3_3:81603042-81603061 | Msa0477410:intron | 25.0% |
| !!! | TCCTAGTTTGTTAAATACTT+GGG | + | chr3_3:81603186-81603205 | Msa0477410:intron | 25.0% |
| ! | GAAACTTATACCTGATAATA+AGG | - | chr3_3:81603412-81603431 | None:intergenic | 25.0% |
| !! | GTTTGTTTATGTTTTTCTTG+AGG | + | chr3_3:81603452-81603471 | Msa0477410:intron | 25.0% |
| !!! | GATCCAGAAATTTTAATAAG+TGG | + | chr3_3:81603857-81603876 | Msa0477410:intron | 25.0% |
| !!! | TCCAGAAATTTTAATAAGTG+GGG | + | chr3_3:81603859-81603878 | Msa0477410:intron | 25.0% |
| ! | TAAGCGTGCAAAATTTATAT+AGG | + | chr3_3:81603926-81603945 | Msa0477410:intron | 25.0% |
| ! | GACAATAATACTGTATAAGT+AGG | + | chr3_3:81604334-81604353 | Msa0477410:intron | 25.0% |
| ! | TTAAACATACAATACACAAG+TGG | + | chr3_3:81604386-81604405 | Msa0477410:intron | 25.0% |
| ! | TAAATAAAATCACACATTGC+AGG | - | chr3_3:81604509-81604528 | None:intergenic | 25.0% |
| ! | TTGAAAATAGAATCTTCAGT+TGG | + | chr3_3:81604571-81604590 | Msa0477410:intron | 25.0% |
| !! | TCTTTTCATGATATGCTTTT+TGG | + | chr3_3:81604716-81604735 | Msa0477410:intron | 25.0% |
| ! | CACAAAATTATAAGCAGAAA+GGG | - | chr3_3:81604773-81604792 | None:intergenic | 25.0% |
| ! | TCACAAAATTATAAGCAGAA+AGG | - | chr3_3:81604774-81604793 | None:intergenic | 25.0% |
| !! | TTCTGCTTATAATTTTGTGA+TGG | + | chr3_3:81604774-81604793 | Msa0477410:intron | 25.0% |
| !! | TCTGCTTATAATTTTGTGAT+GGG | + | chr3_3:81604775-81604794 | Msa0477410:intron | 25.0% |
| ! | AAAATATAAACATGGTTAGG+TGG | + | chr3_3:81605076-81605095 | Msa0477410:intron | 25.0% |
| ! | ACTCTAGCTATTAAGATAAT+AGG | - | chr3_3:81605155-81605174 | None:intergenic | 25.0% |
| ! | CAAATACAACTAGAAATATC+AGG | - | chr3_3:81605274-81605293 | None:intergenic | 25.0% |
| ! | AAAAATATCAAAGCATGCTA+GGG | - | chr3_3:81605508-81605527 | None:intergenic | 25.0% |
| ! | AAAAAATATCAAAGCATGCT+AGG | - | chr3_3:81605509-81605528 | None:intergenic | 25.0% |
| ! | CGCTGAATAAAAAAAATTCA+AGG | - | chr3_3:81605852-81605871 | None:intergenic | 25.0% |
| ! | CTTAAATATGCATATTTGAC+CGG | + | chr3_3:81605930-81605949 | Msa0477410:intron | 25.0% |
| !! | AAAAATTCAAAGCATCTAGT+CGG | - | chr3_3:81606148-81606167 | None:intergenic | 25.0% |
| ! | TTCAAAAACATAGATTTCAG+AGG | + | chr3_3:81606174-81606193 | Msa0477410:intron | 25.0% |
| !! | TAATCAAATGGAGAAGTATA+GGG | - | chr3_3:81606205-81606224 | None:intergenic | 25.0% |
| !! | GCTTTTATAGTTAAAAGGAA+AGG | - | chr3_3:81606281-81606300 | None:intergenic | 25.0% |
| !! | ATGGTGCTTTTATAGTTAAA+AGG | - | chr3_3:81606286-81606305 | None:intergenic | 25.0% |
| ! | TTTGTGAAAATCCTTGAAAA+AGG | + | chr3_3:81606329-81606348 | Msa0477410:intron | 25.0% |
| ! | ATTAATGAAATGCTACATTG+TGG | - | chr3_3:81606519-81606538 | None:intergenic | 25.0% |
| !! | TTGAATATTGCACTTCTTTT+TGG | + | chr3_3:81606669-81606688 | Msa0477410:three_prime_UTR | 25.0% |
| !! | TGAATATTGCACTTCTTTTT+GGG | + | chr3_3:81606670-81606689 | Msa0477410:three_prime_UTR | 25.0% |
| !!! | TTTTTGGGTTAGGTAAATTT+AGG | + | chr3_3:81606685-81606704 | Msa0477410:three_prime_UTR | 25.0% |
| ! | ATTCATGGTTTATTCTTTGT+TGG | + | chr3_3:81606925-81606944 | Msa0477410:three_prime_UTR | 25.0% |
| !! | TATCATTACACAATTTTCAG+AGG | - | chr3_3:81607015-81607034 | None:intergenic | 25.0% |
| !! | TTAGTTAACTTGATGATTTG+TGG | + | chr3_3:81607039-81607058 | Msa0477410:three_prime_UTR | 25.0% |
| TAAAGTGAGATCTAAACATG+TGG | - | chr3_3:81599942-81599961 | None:intergenic | 30.0% | |
| AGTAACGAAGGAGAAAATTA+GGG | - | chr3_3:81600425-81600444 | None:intergenic | 30.0% | |
| AAGTAACGAAGGAGAAAATT+AGG | - | chr3_3:81600426-81600445 | None:intergenic | 30.0% | |
| !! | TGGAATTGAGTTGATCTAAT+TGG | - | chr3_3:81600498-81600517 | None:intergenic | 30.0% |
| ! | TTTGTGAATCGTGATTTTTG+TGG | + | chr3_3:81600757-81600776 | Msa0477410:intron | 30.0% |
| GATTGAAAAATCCCTAAAGA+GGG | - | chr3_3:81600955-81600974 | None:intergenic | 30.0% | |
| TGATTGAAAAATCCCTAAAG+AGG | - | chr3_3:81600956-81600975 | None:intergenic | 30.0% | |
| ! | TAGTCTGAAATTCTTAATGC+AGG | + | chr3_3:81601224-81601243 | Msa0477410:intron | 30.0% |
| TGATTTGAACTCAAAACTAG+AGG | + | chr3_3:81601335-81601354 | Msa0477410:CDS | 30.0% | |
| CAGATAAAAAAAGTTAGCAG+AGG | - | chr3_3:81601749-81601768 | None:intergenic | 30.0% | |
| ! | AACTTTCACATTGCCTATTT+TGG | + | chr3_3:81601801-81601820 | Msa0477410:intron | 30.0% |
| ! | ACTTTCACATTGCCTATTTT+GGG | + | chr3_3:81601802-81601821 | Msa0477410:intron | 30.0% |
| ! | TCATTTATCTTTTGAACCTG+TGG | - | chr3_3:81602040-81602059 | None:intergenic | 30.0% |
| ACAGGTTCAAAAGATAAATG+AGG | + | chr3_3:81602039-81602058 | Msa0477410:intron | 30.0% | |
| TGAGCGAGGTAATAATTTAT+TGG | + | chr3_3:81602262-81602281 | Msa0477410:intron | 30.0% | |
| !!! | TAACTTTTAAGGTTTTCTGG+TGG | - | chr3_3:81602328-81602347 | None:intergenic | 30.0% |
| !!! | GGATAACTTTTAAGGTTTTC+TGG | - | chr3_3:81602331-81602350 | None:intergenic | 30.0% |
| TGTACACTATATTCGTAGTA+AGG | + | chr3_3:81602639-81602658 | Msa0477410:CDS | 30.0% | |
| !! | TTTTCTTTTTTGTTAGTCCG+TGG | + | chr3_3:81602729-81602748 | Msa0477410:intron | 30.0% |
| AGAAGAAGAAGAATTAAACC+TGG | - | chr3_3:81602879-81602898 | None:intergenic | 30.0% | |
| !! | CTCCTAGTTTGTTAAATACT+TGG | + | chr3_3:81603185-81603204 | Msa0477410:intron | 30.0% |
| CATTTCTTCAGTTGAAAACA+GGG | - | chr3_3:81603241-81603260 | None:intergenic | 30.0% | |
| ! | CTGTTTTCAACTGAAGAAAT+GGG | + | chr3_3:81603240-81603259 | Msa0477410:intron | 30.0% |
| ATGTGTAGATCCTTATTATC+AGG | + | chr3_3:81603399-81603418 | Msa0477410:CDS | 30.0% | |
| AGTTTCTTCATTGAACTGTA+TGG | + | chr3_3:81603426-81603445 | Msa0477410:intron | 30.0% | |
| ACTTGTATATTCTCAACATG+AGG | - | chr3_3:81603552-81603571 | None:intergenic | 30.0% | |
| TCATGTTGAGAATATACAAG+TGG | + | chr3_3:81603551-81603570 | Msa0477410:CDS | 30.0% | |
| !!! | AGTTTTTTTTCTCCTTCATC+CGG | + | chr3_3:81603745-81603764 | Msa0477410:intron | 30.0% |
| ACCCCACTTATTAAAATTTC+TGG | - | chr3_3:81603863-81603882 | None:intergenic | 30.0% | |
| !! | AGGGTTATATTTTTGACACT+CGG | - | chr3_3:81604008-81604027 | None:intergenic | 30.0% |
| TTGACTAGATTTCAGATTGT+GGG | - | chr3_3:81604633-81604652 | None:intergenic | 30.0% | |
| TTTGACTAGATTTCAGATTG+TGG | - | chr3_3:81604634-81604653 | None:intergenic | 30.0% | |
| GTGATGTCATAATATCAAGT+TGG | - | chr3_3:81604658-81604677 | None:intergenic | 30.0% | |
| ATTGCAACATGATATAGACA+TGG | + | chr3_3:81604741-81604760 | Msa0477410:intron | 30.0% | |
| TTTCAAAGAATAAGCAGTGA+GGG | - | chr3_3:81604830-81604849 | None:intergenic | 30.0% | |
| ATTTCAAAGAATAAGCAGTG+AGG | - | chr3_3:81604831-81604850 | None:intergenic | 30.0% | |
| TATTAGTTCCAGATCTTGAA+CGG | + | chr3_3:81604854-81604873 | Msa0477410:intron | 30.0% | |
| TTGCTACTAAAGAATTGGAA+TGG | + | chr3_3:81605006-81605025 | Msa0477410:CDS | 30.0% | |
| TAAAGAATTGGAATGGTTTG+CGG | + | chr3_3:81605013-81605032 | Msa0477410:CDS | 30.0% | |
| AGCTATTAAGATAATAGGCA+AGG | - | chr3_3:81605150-81605169 | None:intergenic | 30.0% | |
| ! | ATCTAAGACTAACCAGAAAA+TGG | - | chr3_3:81605186-81605205 | None:intergenic | 30.0% |
| ACAAGTAGATAACATGAAGT+TGG | + | chr3_3:81605417-81605436 | Msa0477410:exon | 30.0% | |
| !!! | TTTTTTTCGGAGAGAAGTTT+AGG | + | chr3_3:81605451-81605470 | Msa0477410:three_prime_UTR | 30.0% |
| CATGTCAATAACATAGCTTA+TGG | - | chr3_3:81605534-81605553 | None:intergenic | 30.0% | |
| ! | TTATTTGGGGAAAACTGTTT+TGG | + | chr3_3:81605675-81605694 | Msa0477410:intron | 30.0% |
| ! | TATTTGGGGAAAACTGTTTT+GGG | + | chr3_3:81605676-81605695 | Msa0477410:intron | 30.0% |
| CTTAAAAACTTGTGAAAACC+AGG | + | chr3_3:81606061-81606080 | Msa0477410:intron | 30.0% | |
| ! | CTAATCAAATGGAGAAGTAT+AGG | - | chr3_3:81606206-81606225 | None:intergenic | 30.0% |
| CTGCATATTTATTTGAACGT+GGG | + | chr3_3:81606644-81606663 | Msa0477410:three_prime_UTR | 30.0% | |
| TGCATATTTATTTGAACGTG+GGG | + | chr3_3:81606645-81606664 | Msa0477410:three_prime_UTR | 30.0% | |
| AAACTTATAGTACAGACAAC+CGG | - | chr3_3:81606890-81606909 | None:intergenic | 30.0% | |
| !! | CATGTTTTCCCTTTTTCATT+TGG | + | chr3_3:81606953-81606972 | Msa0477410:three_prime_UTR | 30.0% |
| !! | TTTGTAAAAAGAGTGTCGTG+TGG | - | chr3_3:81600044-81600063 | None:intergenic | 35.0% |
| !! | CATATAAAGGTGGTGGATAT+TGG | - | chr3_3:81600077-81600096 | None:intergenic | 35.0% |
| AAAGGAACATATAAAGGTGG+TGG | - | chr3_3:81600084-81600103 | None:intergenic | 35.0% | |
| AATCTTGATACCAAACCCTT+TGG | + | chr3_3:81600262-81600281 | Msa0477410:five_prime_UTR | 35.0% | |
| TAATTGGATCTTAAGAGCAG+AGG | - | chr3_3:81600482-81600501 | None:intergenic | 35.0% | |
| AATTCCAAGATCCAATTCCT+CGG | + | chr3_3:81600511-81600530 | Msa0477410:CDS | 35.0% | |
| TTCCTAAATCGATGTTACTG+TGG | + | chr3_3:81600657-81600676 | Msa0477410:intron | 35.0% | |
| GAATGCTACTCAACTTATCT+TGG | - | chr3_3:81600879-81600898 | None:intergenic | 35.0% | |
| ! | TTTTCACTAGACCCTCTTTA+GGG | + | chr3_3:81600941-81600960 | Msa0477410:intron | 35.0% |
| AAAACAGTGAGAAAGTGAAC+TGG | + | chr3_3:81601277-81601296 | Msa0477410:CDS | 35.0% | |
| AAACAGTGAGAAAGTGAACT+GGG | + | chr3_3:81601278-81601297 | Msa0477410:CDS | 35.0% | |
| GACACGTTAATAAAGCAATG+AGG | - | chr3_3:81601633-81601652 | None:intergenic | 35.0% | |
| ATAGGCAATGTGAAAGTTGT+GGG | - | chr3_3:81601799-81601818 | None:intergenic | 35.0% | |
| AATAGGCAATGTGAAAGTTG+TGG | - | chr3_3:81601800-81601819 | None:intergenic | 35.0% | |
| AATCATTACACCTGCACATT+TGG | - | chr3_3:81601862-81601881 | None:intergenic | 35.0% | |
| ! | TTTTCTTGCCAATGTTGTGT+AGG | + | chr3_3:81602137-81602156 | Msa0477410:intron | 35.0% |
| CACACTGTTGCTAATAATCA+TGG | - | chr3_3:81602352-81602371 | None:intergenic | 35.0% | |
| CATGATTATTAGCAACAGTG+TGG | + | chr3_3:81602350-81602369 | Msa0477410:intron | 35.0% | |
| AGAGTCATTGGAATGAACAT+GGG | + | chr3_3:81602755-81602774 | Msa0477410:CDS | 35.0% | |
| GTTGGAAGTGATATCTCAAA+AGG | + | chr3_3:81602786-81602805 | Msa0477410:CDS | 35.0% | |
| ! | ATGCTTTTCCTATGCATTCT+AGG | + | chr3_3:81602938-81602957 | Msa0477410:intron | 35.0% |
| CGGGTAAAACAAACAAATTG+TGG | - | chr3_3:81603115-81603134 | None:intergenic | 35.0% | |
| !!! | CAATTTGTTTGTTTTACCCG+TGG | + | chr3_3:81603115-81603134 | Msa0477410:intron | 35.0% |
| TAAATGGTCAACAAGCTATC+AGG | - | chr3_3:81603142-81603161 | None:intergenic | 35.0% | |
| !! | TGATAGCTTGTTGACCATTT+AGG | + | chr3_3:81603141-81603160 | Msa0477410:intron | 35.0% |
| CCAATGTTGAAACTCCTAAA+TGG | - | chr3_3:81603158-81603177 | None:intergenic | 35.0% | |
| CCATTTAGGAGTTTCAACAT+TGG | + | chr3_3:81603155-81603174 | Msa0477410:intron | 35.0% | |
| GCCCAAGTATTTAACAAACT+AGG | - | chr3_3:81603190-81603209 | None:intergenic | 35.0% | |
| CCATTTCTTCAGTTGAAAAC+AGG | - | chr3_3:81603242-81603261 | None:intergenic | 35.0% | |
| ! | CCTGTTTTCAACTGAAGAAA+TGG | + | chr3_3:81603239-81603258 | Msa0477410:intron | 35.0% |
| TGAAGTTTACAAGTCCTCAA+AGG | + | chr3_3:81603342-81603361 | Msa0477410:CDS | 35.0% | |
| !! | TTCTTTTGCCTTGTTCAAGT+GGG | - | chr3_3:81603380-81603399 | None:intergenic | 35.0% |
| !! | ATTCTTTTGCCTTGTTCAAG+TGG | - | chr3_3:81603381-81603400 | None:intergenic | 35.0% |
| ! | TTTCTTGAGGTATTCTCAAC+CGG | + | chr3_3:81603465-81603484 | Msa0477410:intron | 35.0% |
| !!! | GTTTTTTTTCTCCTTCATCC+GGG | + | chr3_3:81603746-81603765 | Msa0477410:intron | 35.0% |
| ACGATATGCTCTTAGAGAAT+TGG | + | chr3_3:81604127-81604146 | Msa0477410:intron | 35.0% | |
| AACATACAATACACAAGTGG+TGG | + | chr3_3:81604389-81604408 | Msa0477410:intron | 35.0% | |
| CAACAACAACAAATACAAGC+AGG | - | chr3_3:81604459-81604478 | None:intergenic | 35.0% | |
| TCTGGTGTAGATATACAGTA+TGG | - | chr3_3:81604548-81604567 | None:intergenic | 35.0% | |
| ACGATGAGGAAACATTAGTA+TGG | - | chr3_3:81604680-81604699 | None:intergenic | 35.0% | |
| TACTAATGTTTCCTCATCGT+AGG | + | chr3_3:81604680-81604699 | Msa0477410:intron | 35.0% | |
| ACTAATGTTTCCTCATCGTA+GGG | + | chr3_3:81604681-81604700 | Msa0477410:intron | 35.0% | |
| AAAACAAACCGTTCAAGATC+TGG | - | chr3_3:81604865-81604884 | None:intergenic | 35.0% | |
| ACCTCTTGCTACTAAAGAAT+TGG | + | chr3_3:81605001-81605020 | Msa0477410:CDS | 35.0% | |
| TCCAATTCTTTAGTAGCAAG+AGG | - | chr3_3:81605005-81605024 | None:intergenic | 35.0% | |
| !!! | GAGTTTTTTCTGCCATTTTC+TGG | + | chr3_3:81605171-81605190 | Msa0477410:CDS | 35.0% |
| GAGTAAGTGCATATATGGAA+AGG | - | chr3_3:81605252-81605271 | None:intergenic | 35.0% | |
| ATCAGGAGTAAGTGCATATA+TGG | - | chr3_3:81605257-81605276 | None:intergenic | 35.0% | |
| CTTCATGTTATCTACTTGTC+TGG | - | chr3_3:81605416-81605435 | None:intergenic | 35.0% | |
| !!! | GGCTCCTGGTTTATTTTTTT+CGG | + | chr3_3:81605438-81605457 | Msa0477410:three_prime_UTR | 35.0% |
| CTCTCCGAAAAAAATAAACC+AGG | - | chr3_3:81605445-81605464 | None:intergenic | 35.0% | |
| ! | TGCACATTTAAGATCACACA+AGG | - | chr3_3:81605726-81605745 | None:intergenic | 35.0% |
| GAGACATGTTTCGTAAAAGT+CGG | - | chr3_3:81605752-81605771 | None:intergenic | 35.0% | |
| GTAATGCATAAGCTTATGTC+TGG | + | chr3_3:81605785-81605804 | Msa0477410:intron | 35.0% | |
| CATAAGCTTATGTCTGGTAT+GGG | + | chr3_3:81605791-81605810 | Msa0477410:intron | 35.0% | |
| AAATATGCATATTTGACCGG+TGG | + | chr3_3:81605933-81605952 | Msa0477410:intron | 35.0% | |
| ! | AATGTGAGAACTGAGAGTAT+TGG | + | chr3_3:81606416-81606435 | Msa0477410:intron | 35.0% |
| ! | GGAGATTGGACATTGAATTT+TGG | + | chr3_3:81606437-81606456 | Msa0477410:intron | 35.0% |
| GCTGCATATTTATTTGAACG+TGG | + | chr3_3:81606643-81606662 | Msa0477410:three_prime_UTR | 35.0% | |
| !!! | ATTGCACTTCTTTTTGGGTT+AGG | + | chr3_3:81606675-81606694 | Msa0477410:three_prime_UTR | 35.0% |
| AACATAAAAGAGTGAGTACC+AGG | - | chr3_3:81606786-81606805 | None:intergenic | 35.0% | |
| ! | ATCACACAGAAACTGATTCA+TGG | + | chr3_3:81606910-81606929 | Msa0477410:three_prime_UTR | 35.0% |
| TGCTCAAAAACCAAAGGGTT+TGG | - | chr3_3:81600275-81600294 | None:intergenic | 40.0% | |
| TGCACTGCTCAAAAACCAAA+GGG | - | chr3_3:81600280-81600299 | None:intergenic | 40.0% | |
| TTGCACTGCTCAAAAACCAA+AGG | - | chr3_3:81600281-81600300 | None:intergenic | 40.0% | |
| !! | TTGGTTTTTGAGCAGTGCAA+TGG | + | chr3_3:81600281-81600300 | Msa0477410:five_prime_UTR | 40.0% |
| !! | TTTTCCGAACGAAGCTTTGT+TGG | + | chr3_3:81600351-81600370 | Msa0477410:five_prime_UTR | 40.0% |
| ATAGCGAAGACGAAAAGCTT+CGG | - | chr3_3:81600394-81600413 | None:intergenic | 40.0% | |
| GAAGGAGAAAATTAGGGCAA+CGG | - | chr3_3:81600419-81600438 | None:intergenic | 40.0% | |
| AGAGGAATCAGAATCTTCGA+TGG | - | chr3_3:81600464-81600483 | None:intergenic | 40.0% | |
| TTGGATTGATACCGAGGAAT+TGG | - | chr3_3:81600525-81600544 | None:intergenic | 40.0% | |
| ! | GAGATTTTGGATTGATACCG+AGG | - | chr3_3:81600531-81600550 | None:intergenic | 40.0% |
| !! | CACCACAGTAACATCGATTT+AGG | - | chr3_3:81600662-81600681 | None:intergenic | 40.0% |
| CATTCAATCCTTGCAGAATG+AGG | + | chr3_3:81600894-81600913 | Msa0477410:CDS | 40.0% | |
| ! | CTTTTCACTAGACCCTCTTT+AGG | + | chr3_3:81600940-81600959 | Msa0477410:intron | 40.0% |
| TCCTCAGAAAAAAGGGTCAT+TGG | + | chr3_3:81601089-81601108 | Msa0477410:intron | 40.0% | |
| !!! | TCCAATGACCCTTTTTTCTG+AGG | - | chr3_3:81601093-81601112 | None:intergenic | 40.0% |
| AGAAAGTGAACTGGGAATCT+CGG | + | chr3_3:81601286-81601305 | Msa0477410:CDS | 40.0% | |
| GAGGATGTAAGTTGTACACT+TGG | + | chr3_3:81601354-81601373 | Msa0477410:intron | 40.0% | |
| ACACGCACACAAACAAGAAT+AGG | - | chr3_3:81601431-81601450 | None:intergenic | 40.0% | |
| ! | TTTCTTTTCCCCTCTTGTCT+TGG | + | chr3_3:81601657-81601676 | Msa0477410:intron | 40.0% |
| ! | AAGTTGTGGGAGTGTAGTAA+AGG | - | chr3_3:81601786-81601805 | None:intergenic | 40.0% |
| !! | TAAGAGCACGTTCAGTTTTG+CGG | - | chr3_3:81602081-81602100 | None:intergenic | 40.0% |
| AATGTTGAAGGCAAAGCTAG+AGG | + | chr3_3:81602218-81602237 | Msa0477410:CDS | 40.0% | |
| CTATCAGACAAGGTGTATTG+TGG | + | chr3_3:81602540-81602559 | Msa0477410:intron | 40.0% | |
| GGTGTTAATGATCAGACTCA+TGG | + | chr3_3:81602592-81602611 | Msa0477410:intron | 40.0% | |
| ATATAGTGTACAGCAAGCCA+AGG | - | chr3_3:81602631-81602650 | None:intergenic | 40.0% | |
| GAGAGTCATTGGAATGAACA+TGG | + | chr3_3:81602754-81602773 | Msa0477410:CDS | 40.0% | |
| TGAGATATCACTTCCAACAG+AGG | - | chr3_3:81602784-81602803 | None:intergenic | 40.0% | |
| ATTCTAGGCCCTAGAGAAAA+AGG | + | chr3_3:81602953-81602972 | Msa0477410:intron | 40.0% | |
| ! | AGCTTGTGCCTTTTTCTCTA+GGG | - | chr3_3:81602964-81602983 | None:intergenic | 40.0% |
| ! | AAAAGGCACAAGCTGGAAAA+TGG | + | chr3_3:81602970-81602989 | Msa0477410:CDS | 40.0% |
| ! | AAAGGCACAAGCTGGAAAAT+GGG | + | chr3_3:81602971-81602990 | Msa0477410:CDS | 40.0% |
| !! | GTTTTAATCGTTTCCACGTG+AGG | - | chr3_3:81603002-81603021 | None:intergenic | 40.0% |
| AAATCCACCATCTAACCACA+GGG | - | chr3_3:81603085-81603104 | None:intergenic | 40.0% | |
| !! | TCTTTTGCCTTGTTCAAGTG+GGG | - | chr3_3:81603379-81603398 | None:intergenic | 40.0% |
| TAGCAAGCCATACATTGATC+AGG | + | chr3_3:81603509-81603528 | Msa0477410:CDS | 40.0% | |
| AGAACAGCCTTCTTTGTGTA+GGG | - | chr3_3:81603585-81603604 | None:intergenic | 40.0% | |
| TCTCGCTTATGGGAATTTCT+TGG | + | chr3_3:81603602-81603621 | Msa0477410:CDS | 40.0% | |
| AGGAAAGTAAAGTCTGAACC+TGG | - | chr3_3:81603650-81603669 | None:intergenic | 40.0% | |
| TGAATACAAGAGGATCAGGA+GGG | - | chr3_3:81603831-81603850 | None:intergenic | 40.0% | |
| TCACTGAATACAAGAGGATC+AGG | - | chr3_3:81603835-81603854 | None:intergenic | 40.0% | |
| GATCCTCTTGTATTCAGTGA+CGG | + | chr3_3:81603835-81603854 | Msa0477410:intron | 40.0% | |
| AAAGGCTCTATGAATGACGT+TGG | - | chr3_3:81604053-81604072 | None:intergenic | 40.0% | |
| ACAACAAATACAAGCAGGCA+CGG | - | chr3_3:81604454-81604473 | None:intergenic | 40.0% | |
| GGTGTAGATATACAGTATGG+AGG | - | chr3_3:81604545-81604564 | None:intergenic | 40.0% | |
| ! | GAATGGTTTGCGGTATGTAT+CGG | + | chr3_3:81605023-81605042 | Msa0477410:intron | 40.0% |
| TATCATCTGCAGCAGCAAAA+AGG | + | chr3_3:81605328-81605347 | Msa0477410:intron | 40.0% | |
| ATGTTATTGACATGCGTGTC+TGG | + | chr3_3:81605540-81605559 | Msa0477410:intron | 40.0% | |
| GGTGTTCAATTGAACACCTT+TGG | + | chr3_3:81605697-81605716 | Msa0477410:intron | 40.0% | |
| GCATAAGCTTATGTCTGGTA+TGG | + | chr3_3:81605790-81605809 | Msa0477410:intron | 40.0% | |
| TTATACATCATGCACACCCT+TGG | + | chr3_3:81605893-81605912 | Msa0477410:intron | 40.0% | |
| ! | AGATCACACAAAGCATCCAA+GGG | - | chr3_3:81605912-81605931 | None:intergenic | 40.0% |
| ! | AAGATCACACAAAGCATCCA+AGG | - | chr3_3:81605913-81605932 | None:intergenic | 40.0% |
| TGTCTGAGTGAGCATCTTAT+TGG | + | chr3_3:81605965-81605984 | Msa0477410:intron | 40.0% | |
| AGTGAGCATCTTATTGGTAG+AGG | + | chr3_3:81605971-81605990 | Msa0477410:intron | 40.0% | |
| GTGAGCATCTTATTGGTAGA+GGG | + | chr3_3:81605972-81605991 | Msa0477410:intron | 40.0% | |
| CATCTTATTGGTAGAGGGAA+GGG | + | chr3_3:81605977-81605996 | Msa0477410:intron | 40.0% | |
| AGCTAAAGTGGAGGAAATTC+AGG | + | chr3_3:81606001-81606020 | Msa0477410:intron | 40.0% | |
| TGGAGACAGTTAATGATTCC+TGG | - | chr3_3:81606082-81606101 | None:intergenic | 40.0% | |
| ATCATTAACTGTCTCCACAG+TGG | + | chr3_3:81606085-81606104 | Msa0477410:intron | 40.0% | |
| TCATTAACTGTCTCCACAGT+GGG | + | chr3_3:81606086-81606105 | Msa0477410:intron | 40.0% | |
| ! | TGCGCATTTAAGATCACACA+AGG | - | chr3_3:81606122-81606141 | None:intergenic | 40.0% |
| CAATCAACTAAGAGACTGCT+CGG | - | chr3_3:81606386-81606405 | None:intergenic | 40.0% | |
| !! | GAACTGAGAGTATTGGAGAT+TGG | + | chr3_3:81606423-81606442 | Msa0477410:intron | 40.0% |
| CACTTTCTGTATCTTGCAGA+TGG | + | chr3_3:81606606-81606625 | Msa0477410:intron | 40.0% | |
| GCTTGGGTGTTCATGTATTA+TGG | + | chr3_3:81606740-81606759 | Msa0477410:three_prime_UTR | 40.0% | |
| ! | TAGATTTAGAGCGCCTATTC+CGG | + | chr3_3:81606868-81606887 | Msa0477410:three_prime_UTR | 40.0% |
| ATAGTACAGACAACCGGAAT+AGG | - | chr3_3:81606884-81606903 | None:intergenic | 40.0% | |
| ! | CTTGATGATTTGTGGTTCAG+TGG | + | chr3_3:81607047-81607066 | Msa0477410:three_prime_UTR | 40.0% |
| TTTCTCCTTCGTTACTTCCG+AGG | + | chr3_3:81600429-81600448 | Msa0477410:CDS | 45.0% | |
| TTCGATGGAAACATCGACCT+CGG | - | chr3_3:81600449-81600468 | None:intergenic | 45.0% | |
| GATACCGAGGAATTGGATCT+TGG | - | chr3_3:81600518-81600537 | None:intergenic | 45.0% | |
| AGAAGCAACCTCATTCTGCA+AGG | - | chr3_3:81600905-81600924 | None:intergenic | 45.0% | |
| GAATGAGGTTGCTTCTCTTC+AGG | + | chr3_3:81600909-81600928 | Msa0477410:CDS | 45.0% | |
| GAAAGTGAACTGGGAATCTC+GGG | + | chr3_3:81601287-81601306 | Msa0477410:CDS | 45.0% | |
| CTCAATGCTCATGCTTGGAA+GGG | + | chr3_3:81601601-81601620 | Msa0477410:intron | 45.0% | |
| AGAAACCACCAAGACAAGAG+GGG | - | chr3_3:81601668-81601687 | None:intergenic | 45.0% | |
| CAGAAACCACCAAGACAAGA+GGG | - | chr3_3:81601669-81601688 | None:intergenic | 45.0% | |
| TGGTTTCTGCTGAAAGTTGC+TGG | + | chr3_3:81601680-81601699 | Msa0477410:intron | 45.0% | |
| ! | TGTGGGAGTGTAGTAAAGGT+GGG | - | chr3_3:81601782-81601801 | None:intergenic | 45.0% |
| ! | TTGTGGGAGTGTAGTAAAGG+TGG | - | chr3_3:81601783-81601802 | None:intergenic | 45.0% |
| CCACAGCAATGACCCAAAAT+AGG | - | chr3_3:81601817-81601836 | None:intergenic | 45.0% | |
| !! | CCTATTTTGGGTCATTGCTG+TGG | + | chr3_3:81601814-81601833 | Msa0477410:intron | 45.0% |
| TCATCACTAGCCAAATGTGC+AGG | + | chr3_3:81601849-81601868 | Msa0477410:intron | 45.0% | |
| TGTGCAGGTGTAATGATTCG+TGG | + | chr3_3:81601864-81601883 | Msa0477410:intron | 45.0% | |
| TAATGATTCGTGGCCGCTAT+GGG | + | chr3_3:81601874-81601893 | Msa0477410:intron | 45.0% | |
| TTAAGTGGTTAGGCCCATAG+CGG | - | chr3_3:81601890-81601909 | None:intergenic | 45.0% | |
| TTGAGTAGCGTATTCTCCAC+AGG | + | chr3_3:81602021-81602040 | Msa0477410:intron | 45.0% | |
| ACTCACAGTCTCACATACCT+CGG | - | chr3_3:81602110-81602129 | None:intergenic | 45.0% | |
| CTTGCCAATGTTGTGTAGGA+TGG | + | chr3_3:81602141-81602160 | Msa0477410:intron | 45.0% | |
| ACCACCATCCTACACAACAT+TGG | - | chr3_3:81602148-81602167 | None:intergenic | 45.0% | |
| ATGATCAGACTCATGGTGCT+TGG | + | chr3_3:81602599-81602618 | Msa0477410:intron | 45.0% | |
| ATTCCAATGACTCTCAGCCA+CGG | - | chr3_3:81602749-81602768 | None:intergenic | 45.0% | |
| ! | CAGCTTGTGCCTTTTTCTCT+AGG | - | chr3_3:81602965-81602984 | None:intergenic | 45.0% |
| ! | CTAGAGAAAAAGGCACAAGC+TGG | + | chr3_3:81602963-81602982 | Msa0477410:CDS | 45.0% |
| CAAATCCACCATCTAACCAC+AGG | - | chr3_3:81603086-81603105 | None:intergenic | 45.0% | |
| TCAACAAGCTATCAGGACCA+CGG | - | chr3_3:81603135-81603154 | None:intergenic | 45.0% | |
| TTCCAGCTGTGAAAGAACAG+TGG | + | chr3_3:81603263-81603282 | Msa0477410:CDS | 45.0% | |
| TGTGAAAGAACAGTGGTCTG+TGG | + | chr3_3:81603270-81603289 | Msa0477410:CDS | 45.0% | |
| GTGGTCTGTGGTGAAAACAA+AGG | + | chr3_3:81603282-81603301 | Msa0477410:CDS | 45.0% | |
| GTAGCGACCTGATCAATGTA+TGG | - | chr3_3:81603519-81603538 | None:intergenic | 45.0% | |
| ! | TCTGAAGCCCTACACAAAGA+AGG | + | chr3_3:81603575-81603594 | Msa0477410:CDS | 45.0% |
| GAGAACAGCCTTCTTTGTGT+AGG | - | chr3_3:81603586-81603605 | None:intergenic | 45.0% | |
| AAGAAGGCTGTTCTCGCTTA+TGG | + | chr3_3:81603591-81603610 | Msa0477410:CDS | 45.0% | |
| AGAAGGCTGTTCTCGCTTAT+GGG | + | chr3_3:81603592-81603611 | Msa0477410:CDS | 45.0% | |
| TGAGCTAAGGGATAAGGAGT+TGG | - | chr3_3:81603788-81603807 | None:intergenic | 45.0% | |
| ! | CTGGTTTGAGCTAAGGGATA+AGG | - | chr3_3:81603794-81603813 | None:intergenic | 45.0% |
| !! | GCTCAACTGGTTTGAGCTAA+GGG | - | chr3_3:81603800-81603819 | None:intergenic | 45.0% |
| !! | AGCTCAACTGGTTTGAGCTA+AGG | - | chr3_3:81603801-81603820 | None:intergenic | 45.0% |
| GAATACAAGAGGATCAGGAG+GGG | - | chr3_3:81603830-81603849 | None:intergenic | 45.0% | |
| CTGAATACAAGAGGATCAGG+AGG | - | chr3_3:81603832-81603851 | None:intergenic | 45.0% | |
| GATCCGTCACTGAATACAAG+AGG | - | chr3_3:81603841-81603860 | None:intergenic | 45.0% | |
| AATACACAAGTGGTGGCAAG+TGG | + | chr3_3:81604396-81604415 | Msa0477410:intron | 45.0% | |
| ATACACAAGTGGTGGCAAGT+GGG | + | chr3_3:81604397-81604416 | Msa0477410:intron | 45.0% | |
| !!! | CGTGCTTTTTCAACGTCTCT+TGG | - | chr3_3:81604971-81604990 | None:intergenic | 45.0% |
| GATAATAGGCAAGGCCAGAA+GGG | - | chr3_3:81605141-81605160 | None:intergenic | 45.0% | |
| AGATAATAGGCAAGGCCAGA+AGG | - | chr3_3:81605142-81605161 | None:intergenic | 45.0% | |
| ! | GATAACATGAAGTTGGCTCC+TGG | + | chr3_3:81605424-81605443 | Msa0477410:exon | 45.0% |
| ATTGACATGCGTGTCTGGTA+TGG | + | chr3_3:81605545-81605564 | Msa0477410:intron | 45.0% | |
| TTGACATGCGTGTCTGGTAT+GGG | + | chr3_3:81605546-81605565 | Msa0477410:intron | 45.0% | |
| ! | AGATCACACAAGGCATCCAA+AGG | - | chr3_3:81605716-81605735 | None:intergenic | 45.0% |
| GCATCTTATTGGTAGAGGGA+AGG | + | chr3_3:81605976-81605995 | Msa0477410:intron | 45.0% | |
| ATCGTTAACTGTCTCAGCAG+TGG | + | chr3_3:81606025-81606044 | Msa0477410:intron | 45.0% | |
| TCGTTAACTGTCTCAGCAGT+GGG | + | chr3_3:81606026-81606045 | Msa0477410:intron | 45.0% | |
| TTCTGTATCTTGCAGATGGC+TGG | + | chr3_3:81606610-81606629 | Msa0477410:intron | 45.0% | |
| AGGACGTTTCACTGTAGAGT+TGG | + | chr3_3:81606705-81606724 | Msa0477410:three_prime_UTR | 45.0% | |
| GGACGTTTCACTGTAGAGTT+GGG | + | chr3_3:81606706-81606725 | Msa0477410:three_prime_UTR | 45.0% | |
| TTGGGCGCACAATATTGCTT+GGG | + | chr3_3:81606724-81606743 | Msa0477410:three_prime_UTR | 45.0% | |
| !!! | TATATTTTTTTTTTTTTTGA+GGG | + | chr3_3:81599978-81599997 | Msa0477410:five_prime_UTR | 5.0% |
| !! | TTGAATAATATAATTAAAAA+AGG | - | chr3_3:81600102-81600121 | None:intergenic | 5.0% |
| !! | TTGAAAAAAATAATTAATTA+GGG | - | chr3_3:81604027-81604046 | None:intergenic | 5.0% |
| !!! | ATATTTTAGTAATAATATTT+AGG | - | chr3_3:81605063-81605082 | None:intergenic | 5.0% |
| !! | AAAGAGTGTCGTGTGGCTGA+GGG | - | chr3_3:81600037-81600056 | None:intergenic | 50.0% |
| !! | AAAAGAGTGTCGTGTGGCTG+AGG | - | chr3_3:81600038-81600057 | None:intergenic | 50.0% |
| !! | TCCGAACGAAGCTTTGTTGG+CGG | + | chr3_3:81600354-81600373 | Msa0477410:five_prime_UTR | 50.0% |
| ACCGCCAACAAAGCTTCGTT+CGG | - | chr3_3:81600358-81600377 | None:intergenic | 50.0% | |
| !! | AGCTTTGTTGGCGGTGTTGA+TGG | + | chr3_3:81600363-81600382 | Msa0477410:exon | 50.0% |
| ATCGACCTCGGAAGTAACGA+AGG | - | chr3_3:81600437-81600456 | None:intergenic | 50.0% | |
| AAAAGGGTCATTGGATGCCG+AGG | + | chr3_3:81601098-81601117 | Msa0477410:CDS | 50.0% | |
| GACCTGCTTCTGTAGTTCAC+CGG | - | chr3_3:81601151-81601170 | None:intergenic | 50.0% | |
| !! | CATGAGCATTGAGCATGGCA+AGG | - | chr3_3:81601594-81601613 | None:intergenic | 50.0% |
| !! | CCAAGCATGAGCATTGAGCA+TGG | - | chr3_3:81601599-81601618 | None:intergenic | 50.0% |
| CCATGCTCAATGCTCATGCT+TGG | + | chr3_3:81601596-81601615 | Msa0477410:intron | 50.0% | |
| GCTCAATGCTCATGCTTGGA+AGG | + | chr3_3:81601600-81601619 | Msa0477410:intron | 50.0% | |
| ! | CTTTTCCCCTCTTGTCTTGG+TGG | + | chr3_3:81601660-81601679 | Msa0477410:intron | 50.0% |
| GCAGAAACCACCAAGACAAG+AGG | - | chr3_3:81601670-81601689 | None:intergenic | 50.0% | |
| GTAATGATTCGTGGCCGCTA+TGG | + | chr3_3:81601873-81601892 | Msa0477410:intron | 50.0% | |
| ACGTGCTCTTAAAGTTGCCG+AGG | + | chr3_3:81602090-81602109 | Msa0477410:CDS | 50.0% | |
| GCCAATGTTGTGTAGGATGG+TGG | + | chr3_3:81602144-81602163 | Msa0477410:intron | 50.0% | |
| ! | CTCGCTCAGCTCTTTTGCTT+TGG | - | chr3_3:81602250-81602269 | None:intergenic | 50.0% |
| CAAAGCAAAAGAGCTGAGCG+AGG | + | chr3_3:81602248-81602267 | Msa0477410:CDS | 50.0% | |
| TAGTGTACAGCAAGCCAAGG+AGG | - | chr3_3:81602628-81602647 | None:intergenic | 50.0% | |
| TGAACATGGGAAGCCTCTGT+TGG | + | chr3_3:81602768-81602787 | Msa0477410:CDS | 50.0% | |
| !! | CTCTAGGGCCTAGAATGCAT+AGG | - | chr3_3:81602949-81602968 | None:intergenic | 50.0% |
| !! | AAAATGGGCTGAACCTCACG+TGG | + | chr3_3:81602986-81603005 | Msa0477410:CDS | 50.0% |
| ACTGCAATTACTGTGCCCTG+TGG | + | chr3_3:81603067-81603086 | Msa0477410:intron | 50.0% | |
| TACTGTGCCCTGTGGTTAGA+TGG | + | chr3_3:81603075-81603094 | Msa0477410:intron | 50.0% | |
| CAACAAGCTATCAGGACCAC+GGG | - | chr3_3:81603134-81603153 | None:intergenic | 50.0% | |
| GACCACTGTTCTTTCACAGC+TGG | - | chr3_3:81603268-81603287 | None:intergenic | 50.0% | |
| CAGTGCTTGCACATGAGGTT+CGG | - | chr3_3:81603308-81603327 | None:intergenic | 50.0% | |
| GAAGTCAGTGCTTGCACATG+AGG | - | chr3_3:81603313-81603332 | None:intergenic | 50.0% | |
| ACTTGCTCCCCACTTGAACA+AGG | + | chr3_3:81603369-81603388 | Msa0477410:CDS | 50.0% | |
| GGTATTCTCAACCGGTTGAC+AGG | + | chr3_3:81603473-81603492 | Msa0477410:intron | 50.0% | |
| CTTTCGAGCTTCCTGTCAAC+CGG | - | chr3_3:81603487-81603506 | None:intergenic | 50.0% | |
| CATTGATCAGGTCGCTACTG+CGG | + | chr3_3:81603521-81603540 | Msa0477410:CDS | 50.0% | |
| AACCTGGCGATGATATGCAG+TGG | - | chr3_3:81603634-81603653 | None:intergenic | 50.0% | |
| GATAAGGAGTTGGAGGTCCT+GGG | - | chr3_3:81603778-81603797 | None:intergenic | 50.0% | |
| GCTAAGGGATAAGGAGTTGG+AGG | - | chr3_3:81603785-81603804 | None:intergenic | 50.0% | |
| GGCTCTATGAATGACGTTGG+TGG | - | chr3_3:81604050-81604069 | None:intergenic | 50.0% | |
| TACACAAGTGGTGGCAAGTG+GGG | + | chr3_3:81604398-81604417 | Msa0477410:intron | 50.0% | |
| TGCTGCTGCTGTTGTTAGCA+AGG | + | chr3_3:81604483-81604502 | Msa0477410:intron | 50.0% | |
| ACGTCTCTTGGACAGTAGCT+TGG | - | chr3_3:81604959-81604978 | None:intergenic | 50.0% | |
| AGCTTTACGACGAGTGTGGT+GGG | - | chr3_3:81605381-81605400 | None:intergenic | 50.0% | |
| ! | TAGCTTTACGACGAGTGTGG+TGG | - | chr3_3:81605382-81605401 | None:intergenic | 50.0% |
| !! | GCTTAGCTTTACGACGAGTG+TGG | - | chr3_3:81605385-81605404 | None:intergenic | 50.0% |
| ACTCGTCGTAAAGCTAAGCG+AGG | + | chr3_3:81605386-81605405 | Msa0477410:CDS | 50.0% | |
| GCATATTTGACCGGTGGCAT+TGG | + | chr3_3:81605939-81605958 | Msa0477410:intron | 50.0% | |
| TCAGACAATGCCAATGCCAC+CGG | - | chr3_3:81605952-81605971 | None:intergenic | 50.0% | |
| AGAGGGAAGGGTAGCTAAAG+TGG | + | chr3_3:81605989-81606008 | Msa0477410:intron | 50.0% | |
| GTTGGGCGCACAATATTGCT+TGG | + | chr3_3:81606723-81606742 | Msa0477410:three_prime_UTR | 50.0% | |
| GCGAAGACGAAAAGCTTCGG+AGG | - | chr3_3:81600391-81600410 | None:intergenic | 55.0% | |
| AGCCTTTCCAACCTGCTCCT+CGG | - | chr3_3:81601118-81601137 | None:intergenic | 55.0% | |
| TGCCGGTGAACTACAGAAGC+AGG | + | chr3_3:81601146-81601165 | Msa0477410:CDS | 55.0% | |
| ATGGTGCTTGGCTTCCTCCT+TGG | + | chr3_3:81602611-81602630 | Msa0477410:CDS | 55.0% | |
| AGTCCGTGGCTGAGAGTCAT+TGG | + | chr3_3:81602743-81602762 | Msa0477410:intron | 55.0% | |
| TGTGCCCTGTGGTTAGATGG+TGG | + | chr3_3:81603078-81603097 | Msa0477410:intron | 55.0% | |
| AGCCACTGCATATCATCGCC+AGG | + | chr3_3:81603629-81603648 | Msa0477410:CDS | 55.0% | |
| ! | CTGGGTTGAAACCCGGATGA+AGG | - | chr3_3:81603760-81603779 | None:intergenic | 55.0% |
| CTTCATCCGGGTTTCAACCC+AGG | + | chr3_3:81603758-81603777 | Msa0477410:intron | 55.0% | |
| GGATAAGGAGTTGGAGGTCC+TGG | - | chr3_3:81603779-81603798 | None:intergenic | 55.0% | |
| CAAGAGGATCAGGAGGGGTT+GGG | - | chr3_3:81603825-81603844 | None:intergenic | 55.0% | |
| ACAAGAGGATCAGGAGGGGT+TGG | - | chr3_3:81603826-81603845 | None:intergenic | 55.0% | |
| GATGCAATGTGGGGGCAATG+GGG | - | chr3_3:81604432-81604451 | None:intergenic | 55.0% | |
| GGATGCAATGTGGGGGCAAT+GGG | - | chr3_3:81604433-81604452 | None:intergenic | 55.0% | |
| AGCAGGCACGGATGCAATGT+GGG | - | chr3_3:81604442-81604461 | None:intergenic | 55.0% | |
| AAGCAGGCACGGATGCAATG+TGG | - | chr3_3:81604443-81604462 | None:intergenic | 55.0% | |
| ACACACAGCTCCCTACGATG+AGG | - | chr3_3:81604694-81604713 | None:intergenic | 55.0% | |
| GCAAGTAAACCCGCTCGAAG+TGG | + | chr3_3:81605350-81605369 | Msa0477410:CDS | 55.0% | |
| TGGGTGTTTCCACTTCGAGC+GGG | - | chr3_3:81605362-81605381 | None:intergenic | 55.0% | |
| GTGGGTGTTTCCACTTCGAG+CGG | - | chr3_3:81605363-81605382 | None:intergenic | 55.0% | |
| GGGAAGGGTAGCTAAAGTGG+AGG | + | chr3_3:81605992-81606011 | Msa0477410:intron | 55.0% | |
| ACTGTCTCAGCAGTGGGACT+TGG | + | chr3_3:81606032-81606051 | Msa0477410:intron | 55.0% | |
| TTGCAGATGGCTGGCACATG+TGG | + | chr3_3:81606619-81606638 | Msa0477410:intron | 55.0% | |
| TGCAGATGGCTGGCACATGT+GGG | + | chr3_3:81606620-81606639 | Msa0477410:intron | 55.0% | |
| GTCATTGGATGCCGAGGAGC+AGG | + | chr3_3:81601104-81601123 | Msa0477410:CDS | 60.0% | |
| TTGGATGCCGAGGAGCAGGT+TGG | + | chr3_3:81601108-81601127 | Msa0477410:CDS | 60.0% | |
| ! | TGCCGAGGAGCAGGTTGGAA+AGG | + | chr3_3:81601113-81601132 | Msa0477410:CDS | 60.0% |
| GGAAAGGCTCATGCACGTGC+CGG | + | chr3_3:81601129-81601148 | Msa0477410:CDS | 60.0% | |
| GGGAGCAAGTGCGTCCTTTG+AGG | - | chr3_3:81603359-81603378 | None:intergenic | 60.0% | |
| ! | GGAGGTCCTGGGTTGAAACC+CGG | - | chr3_3:81603767-81603786 | None:intergenic | 60.0% |
| GAGGGGTTGGGTAGCTCAAC+TGG | - | chr3_3:81603813-81603832 | None:intergenic | 60.0% | |
| CAAGTGGTGGCAAGTGGGGT+CGG | + | chr3_3:81604402-81604421 | Msa0477410:intron | 60.0% | |
| CGGATGCAATGTGGGGGCAA+TGG | - | chr3_3:81604434-81604453 | None:intergenic | 60.0% | |
| CAGGCACGGATGCAATGTGG+GGG | - | chr3_3:81604440-81604459 | None:intergenic | 60.0% | |
| GCAGGCACGGATGCAATGTG+GGG | - | chr3_3:81604441-81604460 | None:intergenic | 60.0% | |
| TATGCAGGCCTCTGCCCTTC+TGG | + | chr3_3:81605124-81605143 | Msa0477410:intron | 60.0% | |
| CTGTCTCCACAGTGGGACTC+AGG | + | chr3_3:81606093-81606112 | Msa0477410:intron | 60.0% | |
| AGGCATCCTGAGTCCCACTG+TGG | - | chr3_3:81606102-81606121 | None:intergenic | 60.0% | |
| GCAGATGGCTGGCACATGTG+GGG | + | chr3_3:81606621-81606640 | Msa0477410:intron | 60.0% | |
| AGGCAAGGCCAGAAGGGCAG+AGG | - | chr3_3:81605135-81605154 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 81599935 | 81607132 | 81599935 | ID=Msa0477410;Name=Msa0477410 |
| chr3_3 | mRNA | 81599935 | 81607132 | 81599935 | ID=Msa0477410-mRNA-1;Parent=Msa0477410;Name=Msa0477410-mRNA-1;_AED=0.12;_eAED=0.12;_QI=447|1|1|1|0.92|0.86|15|556|439 |
| chr3_3 | exon | 81599935 | 81600532 | 81599935 | ID=Msa0477410-mRNA-1:exon:22538;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81600803 | 81600930 | 81600803 | ID=Msa0477410-mRNA-1:exon:22539;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81601096 | 81601167 | 81601096 | ID=Msa0477410-mRNA-1:exon:22540;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81601246 | 81601359 | 81601246 | ID=Msa0477410-mRNA-1:exon:22541;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81602043 | 81602111 | 81602043 | ID=Msa0477410-mRNA-1:exon:22542;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81602213 | 81602269 | 81602213 | ID=Msa0477410-mRNA-1:exon:22543;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81602607 | 81602660 | 81602607 | ID=Msa0477410-mRNA-1:exon:22544;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81602745 | 81602807 | 81602745 | ID=Msa0477410-mRNA-1:exon:22545;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81602960 | 81603022 | 81602960 | ID=Msa0477410-mRNA-1:exon:22546;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81603256 | 81603420 | 81603256 | ID=Msa0477410-mRNA-1:exon:22547;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81603495 | 81603650 | 81603495 | ID=Msa0477410-mRNA-1:exon:22548;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81604954 | 81605034 | 81604954 | ID=Msa0477410-mRNA-1:exon:22549;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81605131 | 81605192 | 81605131 | ID=Msa0477410-mRNA-1:exon:22550;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81605340 | 81605472 | 81605340 | ID=Msa0477410-mRNA-1:exon:22551;Parent=Msa0477410-mRNA-1 |
| chr3_3 | exon | 81606625 | 81607132 | 81606625 | ID=Msa0477410-mRNA-1:exon:22552;Parent=Msa0477410-mRNA-1 |
| chr3_3 | five_prime_UTR | 81599935 | 81600381 | 81599935 | ID=Msa0477410-mRNA-1:five_prime_utr;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81600382 | 81600532 | 81600382 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81600803 | 81600930 | 81600803 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81601096 | 81601167 | 81601096 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81601246 | 81601359 | 81601246 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81602043 | 81602111 | 81602043 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81602213 | 81602269 | 81602213 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81602607 | 81602660 | 81602607 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81602745 | 81602807 | 81602745 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81602960 | 81603022 | 81602960 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81603256 | 81603420 | 81603256 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81603495 | 81603650 | 81603495 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81604954 | 81605034 | 81604954 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81605131 | 81605192 | 81605131 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | CDS | 81605340 | 81605424 | 81605340 | ID=Msa0477410-mRNA-1:cds;Parent=Msa0477410-mRNA-1 |
| chr3_3 | three_prime_UTR | 81605425 | 81605472 | 81605425 | ID=Msa0477410-mRNA-1:three_prime_utr;Parent=Msa0477410-mRNA-1 |
| chr3_3 | three_prime_UTR | 81606625 | 81607132 | 81606625 | ID=Msa0477410-mRNA-1:three_prime_utr;Parent=Msa0477410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
