AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0480230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0480230 MtrunA17_Chr3g0112341 97.774 674 11 1 1 674 1 670 0.0 1377
Msa0480230 MtrunA17_Chr5g0435751 73.323 656 124 6 16 669 11 617 0.0 997
Msa0480230 MtrunA17_Chr1g0159741 66.381 583 181 5 98 671 82 658 0.0 832
Msa0480230 MtrunA17_Chr3g0125511 49.109 505 242 7 165 657 232 733 9.84e-175 516
Msa0480230 MtrunA17_Chr3g0130381 45.652 552 273 11 111 651 224 759 1.80e-169 504
Msa0480230 MtrunA17_Chr8g0384431 44.704 557 279 11 111 654 252 792 8.84e-168 501
Msa0480230 MtrunA17_Chr1g0187601 47.937 509 242 9 155 649 89 588 7.23e-167 492
Msa0480230 MtrunA17_Chr1g0183721 48.337 511 243 9 159 656 64 566 1.79e-166 490
Msa0480230 MtrunA17_Chr1g0167381 44.933 523 269 7 137 647 72 587 2.43e-164 486
Msa0480230 MtrunA17_Chr8g0372471 47.544 509 245 11 156 652 376 874 1.06e-162 490
Msa0480230 MtrunA17_Chr5g0437501 43.986 557 270 12 113 652 62 593 2.22e-162 480
Msa0480230 MtrunA17_Chr3g0113981 47.000 500 245 11 159 650 167 654 3.66e-160 476
Msa0480230 MtrunA17_Chr7g0246701 44.000 550 274 14 144 674 93 627 1.30e-152 456
Msa0480230 MtrunA17_Chr8g0350391 43.820 534 272 12 160 674 108 632 5.01e-152 454
Msa0480230 MtrunA17_Chr8g0361791 44.841 533 261 12 155 670 82 598 6.08e-151 451
Msa0480230 MtrunA17_Chr6g0472571 42.694 527 274 11 160 669 108 623 2.34e-150 450
Msa0480230 MtrunA17_Chr8g0388881 41.744 539 289 10 147 669 88 617 2.61e-149 447
Msa0480230 MtrunA17_Chr8g0369481 43.478 529 274 10 157 671 70 587 2.00e-148 444
Msa0480230 MtrunA17_Chr1g0203741 42.266 556 281 15 140 669 73 614 3.80e-147 442
Msa0480230 MtrunA17_Chr7g0214551 43.238 525 274 12 154 661 40 557 1.46e-145 435
Msa0480230 MtrunA17_Chr5g0416991 43.715 533 266 11 155 670 82 597 2.22e-145 436
Msa0480230 MtrunA17_Chr4g0055031 42.750 531 276 11 155 670 84 601 3.48e-145 436
Msa0480230 MtrunA17_Chr5g0409411 43.993 541 276 11 147 671 60 589 3.88e-144 432
Msa0480230 MtrunA17_Chr3g0092501 42.218 559 287 15 128 669 55 594 8.70e-144 432
Msa0480230 MtrunA17_Chr8g0350351 42.912 522 271 12 160 669 91 597 1.93e-141 426
Msa0480230 MtrunA17_Chr1g0171781 43.609 532 280 8 150 669 77 600 6.20e-141 425
Msa0480230 MtrunA17_Chr7g0246681 42.830 530 274 12 155 671 73 586 2.24e-140 422
Msa0480230 MtrunA17_Chr1g0155141 40.472 509 266 14 156 651 198 682 6.59e-123 381
Msa0480230 MtrunA17_Chr3g0115931 35.390 551 323 13 145 669 142 685 1.22e-111 352
Msa0480230 MtrunA17_Chr5g0426281 34.508 539 314 12 155 669 144 667 7.55e-108 341
Msa0480230 MtrunA17_Chr5g0404771 50.519 289 138 3 130 415 290 576 2.81e-94 303
Msa0480230 MtrunA17_Chr5g0404761 39.179 268 147 7 401 657 1 263 6.95e-61 205
Msa0480230 MtrunA17_Chr4g0043121 34.796 319 192 8 155 462 84 397 5.10e-56 196
Msa0480230 MtrunA17_Chr4g0043131 48.649 148 73 2 527 673 39 184 1.07e-41 149
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0480230 AT2G39750.1 69.231 702 180 5 1 674 1 694 0.0 1019
Msa0480230 AT5G06050.1 67.994 678 195 6 1 671 1 663 0.0 979
Msa0480230 AT1G77260.1 63.839 672 220 5 3 671 4 655 0.0 918
Msa0480230 AT3G51070.1 49.307 505 239 9 159 651 373 872 3.17e-172 515
Msa0480230 AT5G64030.1 45.966 533 271 9 136 656 277 804 1.31e-170 509
Msa0480230 AT2G34300.2 47.556 532 261 8 138 656 219 745 4.07e-170 506
Msa0480230 AT2G34300.3 47.556 532 261 8 138 656 219 745 4.07e-170 506
Msa0480230 AT2G34300.1 47.556 532 261 8 138 656 219 745 4.07e-170 506
Msa0480230 AT1G29470.1 46.415 530 268 8 139 657 222 746 6.86e-169 503
Msa0480230 AT1G29470.2 46.415 530 268 8 139 657 222 746 6.86e-169 503
Msa0480230 AT2G40280.1 48.509 503 239 10 156 651 79 568 6.89e-169 496
Msa0480230 AT4G14360.1 47.244 508 249 8 152 647 71 571 1.35e-167 493
Msa0480230 AT4G14360.2 47.244 508 249 8 152 647 71 571 1.35e-167 493
Msa0480230 AT3G23300.2 47.093 516 254 8 152 655 74 582 1.63e-167 493
Msa0480230 AT3G23300.1 47.093 516 254 8 152 655 74 582 1.63e-167 493
Msa0480230 AT3G56080.1 47.984 496 234 9 166 651 114 595 2.61e-164 485
Msa0480230 AT1G04430.1 44.527 539 280 7 123 649 50 581 4.08e-161 478
Msa0480230 AT1G04430.3 44.527 539 280 7 123 649 50 581 4.08e-161 478
Msa0480230 AT1G04430.2 44.527 539 280 7 123 649 50 581 4.08e-161 478
Msa0480230 AT3G51070.2 50.435 460 211 9 159 606 373 827 3.39e-156 472
Msa0480230 AT4G10440.1 42.831 551 261 12 150 669 86 613 3.21e-152 455
Msa0480230 AT1G33170.1 42.857 546 271 12 149 669 102 631 4.79e-152 455
Msa0480230 AT5G14430.1 45.287 541 272 11 148 671 70 603 4.48e-151 451
Msa0480230 AT2G45750.1 43.407 546 273 11 149 670 80 613 9.10e-151 451
Msa0480230 AT3G56080.2 49.224 451 205 9 166 606 114 550 6.28e-150 446
Msa0480230 AT5G14430.2 44.917 541 274 11 148 671 70 603 4.24e-149 446
Msa0480230 AT4G19120.1 43.948 537 262 13 157 671 70 589 2.42e-148 444
Msa0480230 AT4G19120.2 43.948 537 262 13 157 671 70 589 2.42e-148 444
Msa0480230 AT1G26850.2 43.527 533 276 11 154 670 83 606 1.35e-146 440
Msa0480230 AT1G26850.1 43.527 533 276 11 154 670 83 606 1.35e-146 440
Msa0480230 AT5G04060.1 42.994 521 276 9 159 669 85 594 1.77e-142 429
Msa0480230 AT1G31850.1 41.728 544 292 11 143 671 62 595 1.73e-141 426
Msa0480230 AT1G31850.2 41.728 544 292 11 143 671 62 595 1.73e-141 426
Msa0480230 AT1G31850.4 41.728 544 292 11 143 671 62 595 1.73e-141 426
Msa0480230 AT1G31850.3 41.728 544 292 11 143 671 62 595 1.73e-141 426
Msa0480230 AT4G00750.1 41.636 550 286 12 148 674 87 624 3.12e-141 427
Msa0480230 AT2G43200.2 41.917 532 280 15 157 671 91 610 4.36e-140 423
Msa0480230 AT2G43200.1 41.917 532 280 15 157 671 91 610 4.36e-140 423
Msa0480230 AT4G18030.1 42.830 530 274 13 157 670 85 601 6.29e-139 420
Msa0480230 AT4G00740.1 42.713 494 258 9 190 671 112 592 3.05e-138 418
Msa0480230 AT4G00740.2 42.713 494 258 9 190 671 112 592 3.05e-138 418
Msa0480230 AT3G10200.1 40.918 523 290 7 157 669 72 585 3.69e-133 404
Msa0480230 AT3G10200.2 42.706 473 253 6 159 622 74 537 4.30e-128 392
Msa0480230 AT1G19430.1 40.514 506 265 13 159 651 223 705 6.92e-124 385
Msa0480230 AT1G19430.3 40.514 506 265 13 159 651 223 705 6.92e-124 385
Msa0480230 AT4G19120.3 44.170 446 211 12 157 580 70 499 9.21e-118 362
Msa0480230 AT1G26850.3 42.755 421 217 10 154 559 83 494 3.41e-106 332
Msa0480230 AT1G78240.1 33.088 544 324 11 155 669 144 676 1.91e-102 328
Msa0480230 AT1G78240.2 33.088 544 324 11 155 669 144 676 1.91e-102 328
Msa0480230 AT1G13860.4 33.761 545 316 13 154 673 78 602 3.93e-96 308
Msa0480230 AT1G13860.3 33.761 545 316 13 154 673 78 602 3.93e-96 308
Msa0480230 AT1G13860.1 33.761 545 316 13 154 673 78 602 3.93e-96 308
Msa0480230 AT1G13860.5 33.761 545 316 13 154 673 78 602 3.93e-96 308
Msa0480230 AT2G03480.2 33.578 545 306 13 153 673 82 594 8.97e-95 305
Msa0480230 AT2G03480.1 34.495 545 312 16 153 673 82 605 4.85e-94 303
Msa0480230 AT1G13860.2 35.333 450 262 11 246 673 4 446 6.14e-84 272
Msa0480230 AT1G19430.2 36.294 394 218 11 159 540 223 595 5.53e-75 253
Msa0480230 AT2G03480.3 32.508 323 198 9 153 462 82 397 5.58e-47 172

Find 202 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGACCTCATCTCTGCTTT+TGG 0.173231 3_3:+85461240 None:intergenic
AAATTTGCGATCAAGAAATT+TGG 0.186954 3_3:-85461439 Msa0480230:CDS
GTGATTTCATAGTTTGATTT+AGG 0.191187 3_3:+85461902 None:intergenic
GTTCTCGCTGTAGAATTAAT+TGG 0.208243 3_3:-85460478 Msa0480230:CDS
TTTATACTTTGAAGCCTATT+AGG 0.228592 3_3:+85459130 None:intergenic
ACGGTGGAGGAGGTTGTGTT+AGG 0.258997 3_3:+85461644 None:intergenic
AAAGATAAGTTTAAATTTCC+AGG 0.291290 3_3:-85461035 Msa0480230:CDS
GAAATTGAAACAGCTTGATT+TGG 0.293480 3_3:+85461721 None:intergenic
CCGTGATTCTCTTGCCATAA+TGG 0.295909 3_3:-85458073 Msa0480230:CDS
ACTCAGTTTCCTCGTTTAAC+AGG 0.300596 3_3:+85462104 None:intergenic
ATGGACATGCGAGCAGGTTT+TGG 0.301982 3_3:-85458989 Msa0480230:CDS
TGTCTCTTGAAATCCAGTTT+TGG 0.302913 3_3:+85461057 None:intergenic
TTGGCTTCATATTCATTCTT+AGG 0.303582 3_3:+85459187 None:intergenic
GTTTGCAAACCCCACCTAAT+AGG 0.304296 3_3:-85459144 Msa0480230:CDS
ATACTTGGACCATATTTCTA+AGG 0.313021 3_3:-85460979 Msa0480230:intron
AAGATAAAGGTGGCCAAAAC+TGG 0.314752 3_3:-85461070 Msa0480230:CDS
GGTTGTGGTGTTGCTAGTTT+TGG 0.315802 3_3:-85460665 Msa0480230:CDS
TATTGCTGCTTGAAGTTAAT+AGG 0.316128 3_3:-85460313 Msa0480230:CDS
CTCTTGAAGCTCATCCATTA+TGG 0.321098 3_3:+85458059 None:intergenic
TTAAGGCAGAATCAAAATAC+TGG 0.321623 3_3:-85459075 Msa0480230:CDS
AGTAAGTAACCTTAGAAATA+TGG 0.322467 3_3:+85460970 None:intergenic
AGGGGCCTCATGCAAGTTAT+AGG 0.326524 3_3:-85457990 Msa0480230:CDS
TGCCGACCAAATGTAATTTC+AGG 0.330987 3_3:+85460710 None:intergenic
GCGGATTCGGTGGAGAAATT+CGG 0.331054 3_3:-85461583 Msa0480230:CDS
TGTTTATTTATTTATACTAC+TGG 0.349678 3_3:-85457790 Msa0480230:three_prime_UTR
TCCGCCGGCGGTGGCGGTGG+TGG 0.351251 3_3:+85461601 None:intergenic
ACCGCCACCGCCGGCGGATT+CGG 0.356017 3_3:-85461596 Msa0480230:CDS
AATTATACAAATAAGTTAGA+TGG 0.356308 3_3:+85457723 None:intergenic
ATCCAGCGATGGTGGATGAT+TGG 0.359949 3_3:-85461507 Msa0480230:CDS
GCTTCTTCGTGCTTATAAAC+TGG 0.360554 3_3:+85460251 None:intergenic
ATGATTCCTGAAATTACATT+TGG 0.368026 3_3:-85460716 Msa0480230:CDS
AATAAGATTAAGAAATGTTA+TGG 0.375972 3_3:-85459008 Msa0480230:CDS
CACTTATAAGTGAAGCTGTT+TGG 0.380664 3_3:-85457579 None:intergenic
ATGCAATGTGTCATCGATTA+TGG 0.382671 3_3:-85458139 Msa0480230:CDS
ATTGGAGCACGATAACCTTT+AGG 0.384211 3_3:+85461271 None:intergenic
TGCTCTTGAGCGTGGGGTAC+CGG 0.392506 3_3:-85460567 Msa0480230:CDS
ACTCGTCTTGTTGAAGATAA+AGG 0.394264 3_3:-85461083 Msa0480230:CDS
GGACGTATGCAGCAGCTGTT+TGG 0.396822 3_3:+85457752 None:intergenic
CTGATTCTCATGAACATCCT+TGG 0.400399 3_3:+85460598 None:intergenic
CGGTGGAGGAGGTTGTGTTA+GGG 0.400490 3_3:+85461645 None:intergenic
TCATGCAAGTTATAGGGTAT+TGG 0.402166 3_3:-85457983 Msa0480230:CDS
TTCGGGATCGTGAACGAGAA+TGG 0.402853 3_3:-85461565 Msa0480230:CDS
CAAGAGATTGCCAAAGCAAT+AGG 0.404996 3_3:-85458042 Msa0480230:CDS
CGGATTCGGTGGAGAAATTC+GGG 0.405279 3_3:-85461582 Msa0480230:CDS
ACCGAATCCGCCGGCGGTGG+CGG 0.405756 3_3:+85461595 None:intergenic
GAGTGAGTATATACCTTGTT+TGG 0.406292 3_3:-85461398 Msa0480230:CDS
TATATGACAGGCAAGGTGTT+TGG 0.412497 3_3:+85458776 None:intergenic
AGCTTGATTTGGATTGTGAT+TGG 0.414325 3_3:+85461732 None:intergenic
AAACAATACCAAACGCTGTC+AGG 0.417389 3_3:+85459649 None:intergenic
TCCTTCACTTTCTTCTACTT+AGG 0.419363 3_3:-85461817 Msa0480230:CDS
GACGTATGCAGCAGCTGTTT+GGG 0.420634 3_3:+85457753 None:intergenic
GGTGGTGGTGGTGACGGTGG+TGG 0.421127 3_3:+85461616 None:intergenic
TTGGATTGTGATTGGGATCC+GGG 0.423050 3_3:+85461740 None:intergenic
TAAACATAAATAGCAGGTAT+TGG 0.426926 3_3:+85457622 None:intergenic
TTGAGAAAATCGACATTGAT+TGG 0.427177 3_3:+85461880 None:intergenic
TGAGCGTGGGGTACCGGCCA+TGG 0.427310 3_3:-85460561 Msa0480230:CDS
ATGTCGGAGGAGTTTGAGAT+TGG 0.432634 3_3:-85461538 Msa0480230:CDS
GAATCCGCCGGCGGTGGCGG+TGG 0.434889 3_3:+85461598 None:intergenic
TCCAGCGATGGTGGATGATT+GGG 0.440642 3_3:-85461506 Msa0480230:CDS
GCCGGCGGTGGCGGTGGTGG+TGG 0.441811 3_3:+85461604 None:intergenic
CTTCGTGCTTATAAACTGGT+TGG 0.446035 3_3:+85460255 None:intergenic
TGATTCTCATGAACATCCTT+GGG 0.446417 3_3:+85460599 None:intergenic
TTTGGATTGTGATTGGGATC+CGG 0.446440 3_3:+85461739 None:intergenic
ACGTTTATTATATCCTAGTC+AGG 0.448437 3_3:-85460519 Msa0480230:CDS
TGCTCTCTGTTGAGAGGAAA+AGG 0.448948 3_3:-85458546 Msa0480230:intron
GGGGCCTCATGCAAGTTATA+GGG 0.449263 3_3:-85457989 Msa0480230:CDS
TGTTTGGTTCCTGCTCCTAA+AGG 0.451586 3_3:-85461286 Msa0480230:CDS
GGTGACGGTGGTGGCGGTGA+CGG 0.453390 3_3:+85461625 None:intergenic
ATCTTACCACTCGACTCTGC+TGG 0.457963 3_3:-85459786 Msa0480230:CDS
AAGTTGCCGTCGACGGAGAA+AGG 0.460240 3_3:-85461355 Msa0480230:CDS
TGCGTGCCAGCCTATTGCTT+TGG 0.465307 3_3:+85458032 None:intergenic
TTCGTGCTTATAAACTGGTT+GGG 0.467536 3_3:+85460256 None:intergenic
GCTTGATTTGGATTGTGATT+GGG 0.467657 3_3:+85461733 None:intergenic
TTCAGTTTGCTCTTGAGCGT+GGG 0.467667 3_3:-85460574 Msa0480230:CDS
TTGCAAACGCGCAGGCCAAT+CGG 0.473912 3_3:+85459159 None:intergenic
AAGTTTAAATTTCCAGGAGG+TGG 0.475407 3_3:-85461029 Msa0480230:CDS
TACTTTGAAGCCTATTAGGT+GGG 0.475555 3_3:+85459134 None:intergenic
GGTGGTGGTGACGGTGGTGG+CGG 0.476414 3_3:+85461619 None:intergenic
AAATAGCAGCTATTGTCAAA+AGG 0.476652 3_3:+85459721 None:intergenic
GCAAATGCTGCCACCATGGC+CGG 0.478324 3_3:+85460548 None:intergenic
GTGATGACCCTGACAGCGTT+TGG 0.479305 3_3:-85459657 Msa0480230:intron
GTGTGAAGAAGATGAGTTGT+TGG 0.479947 3_3:+85461773 None:intergenic
GGCGGTGGTGGTGGTGACGG+TGG 0.480424 3_3:+85461613 None:intergenic
TTAAGCAGAAACTTGACAGC+TGG 0.480495 3_3:-85458826 Msa0480230:CDS
CTTATGTTCGTGCTTTGCAC+TGG 0.480720 3_3:-85459036 Msa0480230:CDS
GGTGGCGGTGACGGTGGAGG+AGG 0.486478 3_3:+85461634 None:intergenic
AAGATGGCTACATTGCAGTA+TGG 0.487098 3_3:-85459750 Msa0480230:CDS
GGTGGTGGCGGTGACGGTGG+AGG 0.487246 3_3:+85461631 None:intergenic
ATATATGACCGTGGATTGAT+TGG 0.487341 3_3:-85458758 Msa0480230:CDS
TGCTATTTAAACCGTGAGGC+AGG 0.489764 3_3:-85459706 Msa0480230:CDS
TCTTCAACAAGACGAGTATG+AGG 0.492603 3_3:+85461089 None:intergenic
GGTGGCGGTGGTGGTGGTGA+CGG 0.493668 3_3:+85461610 None:intergenic
GAACGGCATTGTCCTGAAGA+TGG 0.494620 3_3:-85461322 Msa0480230:CDS
TCCACCGAATCCGCCGGCGG+TGG 0.495774 3_3:+85461592 None:intergenic
TGTCGGAGGAGTTTGAGATT+GGG 0.500106 3_3:-85461537 Msa0480230:CDS
ACCCAATCATCCACCATCGC+TGG 0.500579 3_3:+85461505 None:intergenic
CGCTGTCAGGGTCATCACTT+GGG 0.501410 3_3:+85459662 None:intergenic
ATAAATTGTGTACCACCTCC+TGG 0.502746 3_3:+85461017 None:intergenic
AGAAGCTTTAGAAGAACAAT+GGG 0.505492 3_3:-85460234 Msa0480230:CDS
ACGCTGTCAGGGTCATCACT+TGG 0.508084 3_3:+85459661 None:intergenic
GACTAATTTGCCATGTTATG+TGG 0.514111 3_3:+85457885 None:intergenic
ACCACCACCACCGCCACCGC+CGG 0.515522 3_3:-85461605 Msa0480230:CDS
ATTCAGTTTGCTCTTGAGCG+TGG 0.515706 3_3:-85460575 Msa0480230:CDS
CGCAGGCCAATCGGTAATGT+TGG 0.517728 3_3:+85459168 None:intergenic
GAGGCCCCTCGGCTGTGTCA+CGG 0.520089 3_3:+85458004 None:intergenic
TGCTGCATGCAGGAAATCAT+AGG 0.521747 3_3:+85458573 None:intergenic
GTTGCTCTTGATGTTGGTTG+TGG 0.523426 3_3:-85460680 Msa0480230:CDS
AATGTTATGGACATGCGAGC+AGG 0.525629 3_3:-85458995 Msa0480230:CDS
ACACGGCGCAGATGAATACT+TGG 0.527645 3_3:-85460994 Msa0480230:CDS
CTCTCACCTTTCTCCGTCGA+CGG 0.528899 3_3:+85461349 None:intergenic
CACCATGTCTGTAGCTCCCA+AGG 0.531675 3_3:-85460615 Msa0480230:CDS
CGATTATGGTTGAGATGGAT+CGG 0.532137 3_3:-85458125 Msa0480230:CDS
ATGAATGTTGTTCCTGTCAG+TGG 0.532889 3_3:-85458800 Msa0480230:CDS
ATACGAGTTGCTCTTGATGT+TGG 0.534435 3_3:-85460686 Msa0480230:CDS
ATTATCTAAACATAAATAGC+AGG 0.536131 3_3:+85457616 None:intergenic
TTCCTGAAATTACATTTGGT+CGG 0.536473 3_3:-85460712 Msa0480230:CDS
CTTGATCGATTAGTGCGGAA+AGG 0.539318 3_3:+85461674 None:intergenic
AATTTCTCCACCGAATCCGC+CGG 0.543630 3_3:+85461586 None:intergenic
AAGAAGCTTTAGAAGAACAA+TGG 0.544081 3_3:-85460235 Msa0480230:CDS
GGTGGGGTTTGCAAACGCGC+AGG 0.544143 3_3:+85459151 None:intergenic
TGCAGGAAATCATAGGTTCT+CGG 0.545388 3_3:+85458580 None:intergenic
TCTTCTACTTAGGTAAACAT+TGG 0.546338 3_3:-85461807 Msa0480230:CDS
TGATTGGAGTTATGCATGAC+TGG 0.548867 3_3:-85458742 Msa0480230:intron
ATACTTTGAAGCCTATTAGG+TGG 0.549050 3_3:+85459133 None:intergenic
GCACGATAACCTTTAGGAGC+AGG 0.549495 3_3:+85461277 None:intergenic
TAAGCAGAAACTTGACAGCT+GGG 0.549606 3_3:-85458825 Msa0480230:CDS
ATTTATTTATACTACTGGGT+AGG 0.553132 3_3:-85457785 Msa0480230:three_prime_UTR
GTTCTCGGATAGGTGTCAAA+TGG 0.554639 3_3:+85458595 None:intergenic
GACGGTGGTGGCGGTGACGG+TGG 0.555432 3_3:+85461628 None:intergenic
TTTGTCACATCTGAGATGAA+TGG 0.557954 3_3:+85461961 None:intergenic
AAGGTGTTTGGACCACTGAC+AGG 0.559136 3_3:+85458788 None:intergenic
GTTAATAGGATGCTTAGAGC+AGG 0.559683 3_3:-85460299 Msa0480230:CDS
CGGATGTATACACGTCCACC+AGG 0.559739 3_3:+85458093 None:intergenic
GAGGTTTAGTTCCTGCCTCA+CGG 0.560304 3_3:+85459695 None:intergenic
AATAGGATGCTTAGAGCAGG+AGG 0.562811 3_3:-85460296 Msa0480230:CDS
GAGCTTCGATCCAGCGATGG+TGG 0.563296 3_3:-85461515 Msa0480230:CDS
TCATCACTTGGGTCACATAG+AGG 0.565821 3_3:+85459673 None:intergenic
AGAGCAGGTATGCTGCATGC+AGG 0.566438 3_3:+85458563 None:intergenic
ACCACCACCGCCACCGCCGG+CGG 0.566733 3_3:-85461602 Msa0480230:CDS
GCCACCGCCGGCGGATTCGG+TGG 0.568136 3_3:-85461593 Msa0480230:CDS
TTGGTGCGTACTTACTGCAA+CGG 0.568191 3_3:-85460646 Msa0480230:CDS
AATCCACGGTCATATATGAC+AGG 0.568485 3_3:+85458764 None:intergenic
TTAGGTAAACATTGGTCCGA+TGG 0.573218 3_3:-85461799 Msa0480230:CDS
GATTAAGAAGTTGCCGTCGA+CGG 0.573354 3_3:-85461362 Msa0480230:CDS
AGATTGCCAAAGCAATAGGC+TGG 0.576012 3_3:-85458038 Msa0480230:CDS
AAGTATCACTTCCTCACAAG+AGG 0.576224 3_3:-85457824 Msa0480230:three_prime_UTR
GTTTATTTATTTATACTACT+GGG 0.580764 3_3:-85457789 Msa0480230:three_prime_UTR
ACTTTGAAGCCTATTAGGTG+GGG 0.581473 3_3:+85459135 None:intergenic
ATTGTGATTGGGATCCGGGT+CGG 0.583505 3_3:+85461744 None:intergenic
GTTATCGTGCTCCAATTCCA+TGG 0.586892 3_3:-85461264 Msa0480230:CDS
ATTGTTCACTGCCTCTTGTG+AGG 0.588104 3_3:+85457813 None:intergenic
AACAATACCAAACGCTGTCA+GGG 0.589427 3_3:+85459650 None:intergenic
GATGAGTTGTTGGTATCCAT+CGG 0.592241 3_3:+85461783 None:intergenic
AGAATTAATTGGACTCGAGA+TGG 0.592617 3_3:-85460467 Msa0480230:intron
GAAATCATAGGTTCTCGGAT+AGG 0.593141 3_3:+85458585 None:intergenic
ATCACTCCGTGACACAGCCG+AGG 0.602179 3_3:-85458010 Msa0480230:CDS
TAACGAAACGCAAGTTGAGA+AGG 0.603719 3_3:-85461482 Msa0480230:CDS
ATGAAGCCAACATTACCGAT+TGG 0.604632 3_3:-85459174 Msa0480230:CDS
ATACAGTAAACCACATAACA+TGG 0.608310 3_3:-85457895 Msa0480230:three_prime_UTR
TCAGTTTGCTCTTGAGCGTG+GGG 0.610048 3_3:-85460573 Msa0480230:CDS
CATACCTGCTCTCTGTTGAG+AGG 0.611929 3_3:-85458552 Msa0480230:CDS
ATAACTTGCATGAGGCCCCT+CGG 0.612863 3_3:+85457993 None:intergenic
TTCTCCACCGAATCCGCCGG+CGG 0.615206 3_3:+85461589 None:intergenic
CTTCACACAAAACTCCGACC+CGG 0.615867 3_3:-85461758 Msa0480230:CDS
ATCAAGTCAAAAGCCTGACT+AGG 0.617662 3_3:+85460506 None:intergenic
CCATTATGGCAAGAGAATCA+CGG 0.617800 3_3:+85458073 None:intergenic
GTCATCGATTATGGTTGAGA+TGG 0.619641 3_3:-85458130 Msa0480230:CDS
TGGGAGCTTCGATCCAGCGA+TGG 0.620061 3_3:-85461518 Msa0480230:CDS
TATGATAAGTCATGTGACAT+GGG 0.627611 3_3:+85462129 None:intergenic
GAACGAGAATGGAACAATGT+CGG 0.630243 3_3:-85461554 Msa0480230:CDS
GTATGATAAGTCATGTGACA+TGG 0.635979 3_3:+85462128 None:intergenic
AAATTTGGATTGTGTTCACG+AGG 0.639341 3_3:-85461424 Msa0480230:CDS
GCTTCTACATTATCCAAACA+AGG 0.642672 3_3:+85461385 None:intergenic
TCACTCCGTGACACAGCCGA+GGG 0.649083 3_3:-85458009 Msa0480230:CDS
AGTTGCAAATGCTGCCACCA+TGG 0.650629 3_3:+85460544 None:intergenic
ACCTAAGTAGAAGAAAGTGA+AGG 0.651223 3_3:+85461816 None:intergenic
GCATAACTCCAATCAATCCA+CGG 0.651252 3_3:+85458750 None:intergenic
AAATAAGTTAGATGGTGCAG+TGG 0.653965 3_3:+85457731 None:intergenic
GCTTTAGAAGAACAATGGGA+AGG 0.660425 3_3:-85460230 Msa0480230:intron
ATGGCCCAAAAGCAGAGATG+AGG 0.661245 3_3:-85461245 Msa0480230:intron
GATAAGTTTAAATTTCCAGG+AGG 0.663790 3_3:-85461032 Msa0480230:CDS
CGAGAATGGAACAATGTCGG+AGG 0.664613 3_3:-85461551 Msa0480230:CDS
GCGTGGGGTACCGGCCATGG+TGG 0.665549 3_3:-85460558 Msa0480230:CDS
CGTCTTGTTGAAGATAAAGG+TGG 0.665573 3_3:-85461080 Msa0480230:CDS
TCACTTGGGTCACATAGAGG+AGG 0.666578 3_3:+85459676 None:intergenic
ATCCTTGGGAGCTACAGACA+TGG 0.668744 3_3:+85460613 None:intergenic
AGAAAGGTGAGAGATTTGAA+CGG 0.670333 3_3:-85461339 Msa0480230:CDS
GAAACGCAAGTTGAGAAGGA+AGG 0.676993 3_3:-85461478 Msa0480230:CDS
AAACTTCCAGCAGAGTCGAG+TGG 0.678319 3_3:+85459780 None:intergenic
ATGGATCGGATACTAAGACC+TGG 0.683061 3_3:-85458111 Msa0480230:CDS
GCTACGCGCTTGAAACAATG+AGG 0.686117 3_3:-85457944 Msa0480230:exon
ACGGTCATATATGACAGGCA+AGG 0.687136 3_3:+85458769 None:intergenic
ACGCGCTTGAAACAATGAGG+TGG 0.704161 3_3:-85457941 Msa0480230:exon
TTGCCTGTCATATATGACCG+TGG 0.704215 3_3:-85458767 Msa0480230:CDS
GGTGGTACACAATTTATACA+CGG 0.706977 3_3:-85461011 Msa0480230:CDS
GATCGGATACTAAGACCTGG+TGG 0.718133 3_3:-85458108 Msa0480230:CDS
ATAGGATGCTTAGAGCAGGA+GGG 0.719045 3_3:-85460295 Msa0480230:CDS
AATACCCTATAACTTGCATG+AGG 0.719217 3_3:+85457985 None:intergenic
TATCATACTCCTGTTAAACG+AGG 0.726957 3_3:-85462113 Msa0480230:five_prime_UTR
CACTCCGTGACACAGCCGAG+GGG 0.728820 3_3:-85458008 Msa0480230:CDS
TAGCTGCTATTTAAACCGTG+AGG 0.733432 3_3:-85459710 Msa0480230:CDS
ATAGCAGGTATTGGACTACG+TGG 0.758509 3_3:+85457631 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAATAAACATTATAG+GGG + chr3_3:85459676-85459695 None:intergenic 10.0%
!!! TGAAGTTTTTATTGAAATTA+GGG + chr3_3:85458030-85458049 None:intergenic 15.0%
!!! TTGAAGTTTTTATTGAAATT+AGG + chr3_3:85458031-85458050 None:intergenic 15.0%
!!! AGCTATTTTTTTTTTTTTTG+TGG - chr3_3:85458589-85458608 Msa0480230:CDS 15.0%
!!! GCTATTTTTTTTTTTTTTGT+GGG - chr3_3:85458590-85458609 Msa0480230:CDS 15.0%
!!! ATTATGCACATTTTTTTTAT+AGG - chr3_3:85460127-85460146 Msa0480230:intron 15.0%
!!! AATTTTTTATGATACTCAAA+TGG + chr3_3:85460183-85460202 None:intergenic 15.0%
!! ACTGTTATTATCAAATTTAA+TGG - chr3_3:85460442-85460461 Msa0480230:intron 15.0%
!!! ATTATTTGCTTTATTTATCT+AGG - chr3_3:85460482-85460501 Msa0480230:CDS 15.0%
!! AATAAGATTAAGAAATGTTA+TGG - chr3_3:85460717-85460736 Msa0480230:CDS 15.0%
!! TGTTTATTTATTTATACTAC+TGG - chr3_3:85461935-85461954 Msa0480230:five_prime_UTR 15.0%
!! GTTTATTTATTTATACTACT+GGG - chr3_3:85461936-85461955 Msa0480230:five_prime_UTR 15.0%
!! AATTATACAAATAAGTTAGA+TGG + chr3_3:85462005-85462024 None:intergenic 15.0%
!!! GAAGTTTTTATTGAAATTAG+GGG + chr3_3:85458029-85458048 None:intergenic 20.0%
!! AAAGATAAGTTTAAATTTCC+AGG - chr3_3:85458690-85458709 Msa0480230:intron 20.0%
!! ATAAATTAGATGTCATTGTA+TGG - chr3_3:85458910-85458929 Msa0480230:intron 20.0%
!! TTCAACAAATTCAATCTAAA+CGG + chr3_3:85459539-85459558 None:intergenic 20.0%
!! ATTTAACTCTGATTATATCA+TGG + chr3_3:85460259-85460278 None:intergenic 20.0%
!! ATATAATCAGAGTTAAATGT+AGG - chr3_3:85460261-85460280 Msa0480230:CDS 20.0%
!!! GAACTAGTTTTACTTTTTTA+GGG + chr3_3:85460310-85460329 None:intergenic 20.0%
!!! ATTTGATAATAACAGTAAGA+TGG + chr3_3:85460438-85460457 None:intergenic 20.0%
!!! TCTTTTATGTATCTTGAATA+AGG + chr3_3:85461020-85461039 None:intergenic 20.0%
!! TATTTCATGATTTATGCTAT+AGG - chr3_3:85461101-85461120 Msa0480230:CDS 20.0%
!! ATTATCTAAACATAAATAGC+AGG + chr3_3:85462112-85462131 None:intergenic 20.0%
!! GTGATTTCATAGTTTGATTT+AGG + chr3_3:85457826-85457845 None:intergenic 25.0%
! AAATTTGCGATCAAGAAATT+TGG - chr3_3:85458286-85458305 Msa0480230:intron 25.0%
! TGGTAAAAAGTTGAATTGTT+TGG - chr3_3:85458423-85458442 Msa0480230:intron 25.0%
! TTGCTTTCAATTAAGCTAAA+TGG - chr3_3:85458526-85458545 Msa0480230:intron 25.0%
! TGCTTTCAATTAAGCTAAAT+GGG - chr3_3:85458527-85458546 Msa0480230:intron 25.0%
! AGTAAGTAACCTTAGAAATA+TGG + chr3_3:85458758-85458777 None:intergenic 25.0%
! ATGATTCCTGAAATTACATT+TGG - chr3_3:85459009-85459028 Msa0480230:CDS 25.0%
! TAAACTGTATAGTGTCAAAT+AGG - chr3_3:85459752-85459771 Msa0480230:CDS 25.0%
! TTGAACAGTCAATTAGTTAT+TGG - chr3_3:85459826-85459845 Msa0480230:intron 25.0%
! TGAACAGTCAATTAGTTATT+GGG - chr3_3:85459827-85459846 Msa0480230:intron 25.0%
!!! TGGAAGTTTTTGAAAAAAGA+TGG - chr3_3:85459959-85459978 Msa0480230:intron 25.0%
!!! GGAACTAGTTTTACTTTTTT+AGG + chr3_3:85460311-85460330 None:intergenic 25.0%
!!! TTTATACTTTGAAGCCTATT+AGG + chr3_3:85460598-85460617 None:intergenic 25.0%
!!! CTTGTTGTTAATATACATCA+GGG - chr3_3:85460787-85460806 Msa0480230:intron 25.0%
! ATTTATTTATACTACTGGGT+AGG - chr3_3:85461940-85461959 Msa0480230:five_prime_UTR 25.0%
! TAAACATAAATAGCAGGTAT+TGG + chr3_3:85462106-85462125 None:intergenic 25.0%
TATGATAAGTCATGTGACAT+GGG + chr3_3:85457599-85457618 None:intergenic 30.0%
!!! TACCTTTGTGTTCTGTTTTT+TGG + chr3_3:85457710-85457729 None:intergenic 30.0%
TTGAGAAAATCGACATTGAT+TGG + chr3_3:85457848-85457867 None:intergenic 30.0%
TCTTCTACTTAGGTAAACAT+TGG - chr3_3:85457918-85457937 Msa0480230:three_prime_UTR 30.0%
GAAATTGAAACAGCTTGATT+TGG + chr3_3:85458007-85458026 None:intergenic 30.0%
! TTTTTCTTGATCGATTAGTG+CGG + chr3_3:85458059-85458078 None:intergenic 30.0%
! TTCAACTTTTTACCATCTTC+AGG + chr3_3:85458418-85458437 None:intergenic 30.0%
AATGGGTGTTTCAAATTATG+AGG - chr3_3:85458544-85458563 Msa0480230:intron 30.0%
!!! TTTTTTTTTTTTGTGGGTGC+AGG - chr3_3:85458596-85458615 Msa0480230:CDS 30.0%
GATAAGTTTAAATTTCCAGG+AGG - chr3_3:85458693-85458712 Msa0480230:intron 30.0%
! ATACTTGGACCATATTTCTA+AGG - chr3_3:85458746-85458765 Msa0480230:CDS 30.0%
! TGTCATTGTATGGTGTATTT+TGG - chr3_3:85458920-85458939 Msa0480230:intron 30.0%
!!! ATTTTGGTTTCACCGTTTTT+TGG - chr3_3:85458936-85458955 Msa0480230:intron 30.0%
!!! TTTTGGTTTCACCGTTTTTT+GGG - chr3_3:85458937-85458956 Msa0480230:intron 30.0%
TTCCTGAAATTACATTTGGT+CGG - chr3_3:85459013-85459032 Msa0480230:CDS 30.0%
ACGTTTATTATATCCTAGTC+AGG - chr3_3:85459206-85459225 Msa0480230:CDS 30.0%
GTATAATGAGCAATAGTTCT+TGG - chr3_3:85459299-85459318 Msa0480230:intron 30.0%
TTGTTTACTTGTGATGAAGA+TGG - chr3_3:85459387-85459406 Msa0480230:intron 30.0%
TGTTTACTTGTGATGAAGAT+GGG - chr3_3:85459388-85459407 Msa0480230:intron 30.0%
! TATTGCTGCTTGAAGTTAAT+AGG - chr3_3:85459412-85459431 Msa0480230:intron 30.0%
!! AAGAAGCTTTAGAAGAACAA+TGG - chr3_3:85459490-85459509 Msa0480230:intron 30.0%
!! AGAAGCTTTAGAAGAACAAT+GGG - chr3_3:85459491-85459510 Msa0480230:intron 30.0%
!!! TTGTTGAAGCATTTTAGCTA+TGG - chr3_3:85459551-85459570 Msa0480230:intron 30.0%
GAACAGTCAATTAGTTATTG+GGG - chr3_3:85459828-85459847 Msa0480230:intron 30.0%
AAATAGCAGCTATTGTCAAA+AGG + chr3_3:85460007-85460026 None:intergenic 30.0%
AAAATTGACAGACTTGACTA+TGG + chr3_3:85460157-85460176 None:intergenic 30.0%
!!! GTGTTTTAACATAGCAAGAA+TGG + chr3_3:85460288-85460307 None:intergenic 30.0%
TTGGCTTCATATTCATTCTT+AGG + chr3_3:85460541-85460560 None:intergenic 30.0%
! ATCCAGAAAAGAGCTTTTTA+AGG - chr3_3:85460633-85460652 Msa0480230:CDS 30.0%
TTAAGGCAGAATCAAAATAC+TGG - chr3_3:85460650-85460669 Msa0480230:CDS 30.0%
CCTGATGTATATTAACAACA+AGG + chr3_3:85460789-85460808 None:intergenic 30.0%
!! CCTTGTTGTTAATATACATC+AGG - chr3_3:85460786-85460805 Msa0480230:intron 30.0%
AAACAAATACATGAAATCCC+AGG + chr3_3:85461247-85461266 None:intergenic 30.0%
TTGTGATGTTGAAAAGAAAC+TGG - chr3_3:85461266-85461285 Msa0480230:CDS 30.0%
AGTTTGACAGGAATTTATGT+AGG - chr3_3:85461314-85461333 Msa0480230:CDS 30.0%
GTTTGACAGGAATTTATGTA+GGG - chr3_3:85461315-85461334 Msa0480230:CDS 30.0%
TAGGGATTAAAAACGAAAGT+TGG - chr3_3:85461333-85461352 Msa0480230:CDS 30.0%
AGGGATTAAAAACGAAAGTT+GGG - chr3_3:85461334-85461353 Msa0480230:CDS 30.0%
AGATGCACAAATATGTAGAT+TGG + chr3_3:85461428-85461447 None:intergenic 30.0%
AAATAAGAAACTTGCAACAC+TGG - chr3_3:85461520-85461539 Msa0480230:CDS 30.0%
ATACAGTAAACCACATAACA+TGG - chr3_3:85461830-85461849 Msa0480230:CDS 30.0%
GTATGATAAGTCATGTGACA+TGG + chr3_3:85457600-85457619 None:intergenic 35.0%
TATCATACTCCTGTTAAACG+AGG - chr3_3:85457612-85457631 Msa0480230:three_prime_UTR 35.0%
CTCCAAAAAACAGAACACAA+AGG - chr3_3:85457705-85457724 Msa0480230:three_prime_UTR 35.0%
! TTTGTCACATCTGAGATGAA+TGG + chr3_3:85457767-85457786 None:intergenic 35.0%
TCCTTCACTTTCTTCTACTT+AGG - chr3_3:85457908-85457927 Msa0480230:three_prime_UTR 35.0%
ACCTAAGTAGAAGAAAGTGA+AGG + chr3_3:85457912-85457931 None:intergenic 35.0%
!! GCTTGATTTGGATTGTGATT+GGG + chr3_3:85457995-85458014 None:intergenic 35.0%
!! AGCTTGATTTGGATTGTGAT+TGG + chr3_3:85457996-85458015 None:intergenic 35.0%
AAATTTGGATTGTGTTCACG+AGG - chr3_3:85458301-85458320 Msa0480230:intron 35.0%
GAGTGAGTATATACCTTGTT+TGG - chr3_3:85458327-85458346 Msa0480230:intron 35.0%
GCTTCTACATTATCCAAACA+AGG + chr3_3:85458343-85458362 None:intergenic 35.0%
AGAAAGGTGAGAGATTTGAA+CGG - chr3_3:85458386-85458405 Msa0480230:intron 35.0%
! ACTCGTCTTGTTGAAGATAA+AGG - chr3_3:85458642-85458661 Msa0480230:intron 35.0%
! TGTCTCTTGAAATCCAGTTT+TGG + chr3_3:85458671-85458690 None:intergenic 35.0%
AAGTTTAAATTTCCAGGAGG+TGG - chr3_3:85458696-85458715 Msa0480230:intron 35.0%
GGTGGTACACAATTTATACA+CGG - chr3_3:85458714-85458733 Msa0480230:intron 35.0%
TGCAACCATGAAATGTAATG+TGG + chr3_3:85458833-85458852 None:intergenic 35.0%
GCAAGATAGTGAAATGTGAT+TGG - chr3_3:85458850-85458869 Msa0480230:intron 35.0%
ACTGATACAGTCCCAAAAAA+CGG + chr3_3:85458951-85458970 None:intergenic 35.0%
ACTGTATCAGTGTATCTTGT+AGG - chr3_3:85458960-85458979 Msa0480230:intron 35.0%
TGATTCTCATGAACATCCTT+GGG + chr3_3:85459129-85459148 None:intergenic 35.0%
GTTCTCGCTGTAGAATTAAT+TGG - chr3_3:85459247-85459266 Msa0480230:intron 35.0%
AGAATTAATTGGACTCGAGA+TGG - chr3_3:85459258-85459277 Msa0480230:intron 35.0%
TTCGTGCTTATAAACTGGTT+GGG + chr3_3:85459472-85459491 None:intergenic 35.0%
AGCAATCAAATTGTTGAGAG+AGG + chr3_3:85459623-85459642 None:intergenic 35.0%
GTCTTATATGCTATGACTTG+AGG - chr3_3:85459719-85459738 Msa0480230:CDS 35.0%
!! ACATTGACTCATCATAGAAC+AGG + chr3_3:85459886-85459905 None:intergenic 35.0%
ATGATGAGTCAATGTAACTC+TGG - chr3_3:85459891-85459910 Msa0480230:intron 35.0%
TGATGAGTCAATGTAACTCT+GGG - chr3_3:85459892-85459911 Msa0480230:intron 35.0%
TATAATCGTGACAAGATCTG+AGG + chr3_3:85460107-85460126 None:intergenic 35.0%
ACTAGTTCCTTTCTTCATTC+TGG - chr3_3:85460322-85460341 Msa0480230:CDS 35.0%
AGTGTAACCAGAATGAAGAA+AGG + chr3_3:85460332-85460351 None:intergenic 35.0%
!! TACTTTGAAGCCTATTAGGT+GGG + chr3_3:85460594-85460613 None:intergenic 35.0%
!! ATACTTTGAAGCCTATTAGG+TGG + chr3_3:85460595-85460614 None:intergenic 35.0%
! TGCCTTAAAAAGCTCTTTTC+TGG + chr3_3:85460638-85460657 None:intergenic 35.0%
! ATATATGACCGTGGATTGAT+TGG - chr3_3:85460967-85460986 Msa0480230:intron 35.0%
CCAACAAAAAAGTAATGCAG+AGG + chr3_3:85461071-85461090 None:intergenic 35.0%
!!! CCTCTGCATTACTTTTTTGT+TGG - chr3_3:85461068-85461087 Msa0480230:CDS 35.0%
GAGCTAACAAGTAGAGAAAA+GGG + chr3_3:85461207-85461226 None:intergenic 35.0%
! ATGCAATGTGTCATCGATTA+TGG - chr3_3:85461586-85461605 Msa0480230:CDS 35.0%
! AATACCCTATAACTTGCATG+AGG + chr3_3:85461743-85461762 None:intergenic 35.0%
TCATGCAAGTTATAGGGTAT+TGG - chr3_3:85461742-85461761 Msa0480230:CDS 35.0%
! GACTAATTTGCCATGTTATG+TGG + chr3_3:85461843-85461862 None:intergenic 35.0%
AAATAAGTTAGATGGTGCAG+TGG + chr3_3:85461997-85462016 None:intergenic 35.0%
ACTCAGTTTCCTCGTTTAAC+AGG + chr3_3:85457624-85457643 None:intergenic 40.0%
TTAGGTAAACATTGGTCCGA+TGG - chr3_3:85457926-85457945 Msa0480230:three_prime_UTR 40.0%
GATGAGTTGTTGGTATCCAT+CGG + chr3_3:85457945-85457964 None:intergenic 40.0%
GTGTGAAGAAGATGAGTTGT+TGG + chr3_3:85457955-85457974 None:intergenic 40.0%
TTTGGATTGTGATTGGGATC+CGG + chr3_3:85457989-85458008 None:intergenic 40.0%
GAACGAGAATGGAACAATGT+CGG - chr3_3:85458171-85458190 Msa0480230:intron 40.0%
! TAACGAAACGCAAGTTGAGA+AGG - chr3_3:85458243-85458262 Msa0480230:intron 40.0%
ATTGGAGCACGATAACCTTT+AGG + chr3_3:85458457-85458476 None:intergenic 40.0%
!! TTGACCTCATCTCTGCTTTT+GGG + chr3_3:85458487-85458506 None:intergenic 40.0%
! TTTGACCTCATCTCTGCTTT+TGG + chr3_3:85458488-85458507 None:intergenic 40.0%
!!! TTTTTTTGTGGGTGCAGGTA+TGG - chr3_3:85458601-85458620 Msa0480230:CDS 40.0%
TCTTCAACAAGACGAGTATG+AGG + chr3_3:85458639-85458658 None:intergenic 40.0%
! CGTCTTGTTGAAGATAAAGG+TGG - chr3_3:85458645-85458664 Msa0480230:intron 40.0%
AAGATAAAGGTGGCCAAAAC+TGG - chr3_3:85458655-85458674 Msa0480230:intron 40.0%
ATAAATTGTGTACCACCTCC+TGG + chr3_3:85458711-85458730 None:intergenic 40.0%
TGCCGACCAAATGTAATTTC+AGG + chr3_3:85459018-85459037 None:intergenic 40.0%
ATACGAGTTGCTCTTGATGT+TGG - chr3_3:85459039-85459058 Msa0480230:CDS 40.0%
CTGATTCTCATGAACATCCT+TGG + chr3_3:85459130-85459149 None:intergenic 40.0%
ATCAAGTCAAAAGCCTGACT+AGG + chr3_3:85459222-85459241 None:intergenic 40.0%
GTTAATAGGATGCTTAGAGC+AGG - chr3_3:85459426-85459445 Msa0480230:intron 40.0%
!!! AGCAGGAGGGTATTTTGTTT+GGG - chr3_3:85459443-85459462 Msa0480230:intron 40.0%
CTTCGTGCTTATAAACTGGT+TGG + chr3_3:85459473-85459492 None:intergenic 40.0%
GCTTCTTCGTGCTTATAAAC+TGG + chr3_3:85459477-85459496 None:intergenic 40.0%
!! GCTTTAGAAGAACAATGGGA+AGG - chr3_3:85459495-85459514 Msa0480230:intron 40.0%
CAAATTGTTGAGAGAGGTCT+AGG + chr3_3:85459617-85459636 None:intergenic 40.0%
CAGTTCGAGAAAAGTAGGAA+AGG + chr3_3:85459804-85459823 None:intergenic 40.0%
CAAGTCAGTTCGAGAAAAGT+AGG + chr3_3:85459809-85459828 None:intergenic 40.0%
AAGATGGCTACATTGCAGTA+TGG - chr3_3:85459975-85459994 Msa0480230:intron 40.0%
! TAGCTGCTATTTAAACCGTG+AGG - chr3_3:85460015-85460034 Msa0480230:intron 40.0%
AACAATACCAAACGCTGTCA+GGG + chr3_3:85460078-85460097 None:intergenic 40.0%
AAACAATACCAAACGCTGTC+AGG + chr3_3:85460079-85460098 None:intergenic 40.0%
ATGAAGCCAACATTACCGAT+TGG - chr3_3:85460551-85460570 Msa0480230:CDS 40.0%
!! ACTTTGAAGCCTATTAGGTG+GGG + chr3_3:85460593-85460612 None:intergenic 40.0%
TTAAGCAGAAACTTGACAGC+TGG - chr3_3:85460899-85460918 Msa0480230:intron 40.0%
TAAGCAGAAACTTGACAGCT+GGG - chr3_3:85460900-85460919 Msa0480230:intron 40.0%
ATGAATGTTGTTCCTGTCAG+TGG - chr3_3:85460925-85460944 Msa0480230:intron 40.0%
! TATATGACAGGCAAGGTGTT+TGG + chr3_3:85460952-85460971 None:intergenic 40.0%
AATCCACGGTCATATATGAC+AGG + chr3_3:85460964-85460983 None:intergenic 40.0%
GCATAACTCCAATCAATCCA+CGG + chr3_3:85460978-85460997 None:intergenic 40.0%
TGATTGGAGTTATGCATGAC+TGG - chr3_3:85460983-85461002 Msa0480230:CDS 40.0%
AGACACTAGTGTTCTCAATG+TGG - chr3_3:85461037-85461056 Msa0480230:CDS 40.0%
GAAATCATAGGTTCTCGGAT+AGG + chr3_3:85461143-85461162 None:intergenic 40.0%
TGCAGGAAATCATAGGTTCT+CGG + chr3_3:85461148-85461167 None:intergenic 40.0%
GGAGCTAACAAGTAGAGAAA+AGG + chr3_3:85461208-85461227 None:intergenic 40.0%
CATTATCTCCTTAACTGCCT+GGG - chr3_3:85461227-85461246 Msa0480230:intron 40.0%
GTTGAAAAGAAACTGGTTGC+TGG - chr3_3:85461273-85461292 Msa0480230:CDS 40.0%
ACTGGTTGCTGGAAATATGT+AGG - chr3_3:85461284-85461303 Msa0480230:CDS 40.0%
CTGGTTGCTGGAAATATGTA+GGG - chr3_3:85461285-85461304 Msa0480230:CDS 40.0%
TGGTTGCTGGAAATATGTAG+GGG - chr3_3:85461286-85461305 Msa0480230:CDS 40.0%
! GTCATCGATTATGGTTGAGA+TGG - chr3_3:85461595-85461614 Msa0480230:CDS 40.0%
CGATTATGGTTGAGATGGAT+CGG - chr3_3:85461600-85461619 Msa0480230:CDS 40.0%
CCATTATGGCAAGAGAATCA+CGG + chr3_3:85461655-85461674 None:intergenic 40.0%
CTCTTGAAGCTCATCCATTA+TGG + chr3_3:85461669-85461688 None:intergenic 40.0%
CAAGAGATTGCCAAAGCAAT+AGG - chr3_3:85461683-85461702 Msa0480230:CDS 40.0%
AAGTATCACTTCCTCACAAG+AGG - chr3_3:85461901-85461920 Msa0480230:exon 40.0%
!! AGCAACGATTTTGAGAGCGT+TGG + chr3_3:85457876-85457895 None:intergenic 45.0%
TTGGATTGTGATTGGGATCC+GGG + chr3_3:85457988-85458007 None:intergenic 45.0%
CTTGATCGATTAGTGCGGAA+AGG + chr3_3:85458054-85458073 None:intergenic 45.0%
! ATGTCGGAGGAGTTTGAGAT+TGG - chr3_3:85458187-85458206 Msa0480230:intron 45.0%
! TGTCGGAGGAGTTTGAGATT+GGG - chr3_3:85458188-85458207 Msa0480230:intron 45.0%
! GAAACGCAAGTTGAGAAGGA+AGG - chr3_3:85458247-85458266 Msa0480230:intron 45.0%
GATTAAGAAGTTGCCGTCGA+CGG - chr3_3:85458363-85458382 Msa0480230:intron 45.0%
! TGTTTGGTTCCTGCTCCTAA+AGG - chr3_3:85458439-85458458 Msa0480230:intron 45.0%
GTTATCGTGCTCCAATTCCA+TGG - chr3_3:85458461-85458480 Msa0480230:intron 45.0%
CGACGCCACATTACATTTCA+TGG - chr3_3:85458825-85458844 Msa0480230:CDS 45.0%
! GTTGCTCTTGATGTTGGTTG+TGG - chr3_3:85459045-85459064 Msa0480230:CDS 45.0%
!!! GGTTGTGGTGTTGCTAGTTT+TGG - chr3_3:85459060-85459079 Msa0480230:CDS 45.0%
TTGGTGCGTACTTACTGCAA+CGG - chr3_3:85459079-85459098 Msa0480230:CDS 45.0%
! ATTCAGTTTGCTCTTGAGCG+TGG - chr3_3:85459150-85459169 Msa0480230:CDS 45.0%
! TTCAGTTTGCTCTTGAGCGT+GGG - chr3_3:85459151-85459170 Msa0480230:CDS 45.0%
AATAGGATGCTTAGAGCAGG+AGG - chr3_3:85459429-85459448 Msa0480230:intron 45.0%
ATAGGATGCTTAGAGCAGGA+GGG - chr3_3:85459430-85459449 Msa0480230:intron 45.0%
!!! GAGCAGGAGGGTATTTTGTT+TGG - chr3_3:85459442-85459461 Msa0480230:intron 45.0%
! TGCTATTTAAACCGTGAGGC+AGG - chr3_3:85460019-85460038 Msa0480230:intron 45.0%
TCATCACTTGGGTCACATAG+AGG + chr3_3:85460055-85460074 None:intergenic 45.0%
GTTTGCAAACCCCACCTAAT+AGG - chr3_3:85460581-85460600 Msa0480230:CDS 45.0%
CTTATGTTCGTGCTTTGCAC+TGG - chr3_3:85460689-85460708 Msa0480230:CDS 45.0%
AATGTTATGGACATGCGAGC+AGG - chr3_3:85460730-85460749 Msa0480230:intron 45.0%
ACGGTCATATATGACAGGCA+AGG + chr3_3:85460959-85460978 None:intergenic 45.0%
TTGCCTGTCATATATGACCG+TGG - chr3_3:85460958-85460977 Msa0480230:intron 45.0%
GTTCTCGGATAGGTGTCAAA+TGG + chr3_3:85461133-85461152 None:intergenic 45.0%
TGCTGCATGCAGGAAATCAT+AGG + chr3_3:85461155-85461174 None:intergenic 45.0%
! TTTTCCTCTCAACAGAGAGC+AGG + chr3_3:85461180-85461199 None:intergenic 45.0%
TGCTCTCTGTTGAGAGGAAA+AGG - chr3_3:85461179-85461198 Msa0480230:intron 45.0%
CCAGGCAGTTAAGGAGATAA+TGG + chr3_3:85461229-85461248 None:intergenic 45.0%
CCATTATCTCCTTAACTGCC+TGG - chr3_3:85461226-85461245 Msa0480230:intron 45.0%
CATGAAATCCCAGGCAGTTA+AGG + chr3_3:85461238-85461257 None:intergenic 45.0%
GTAGGGGACAATAGTTTGAC+AGG - chr3_3:85461302-85461321 Msa0480230:CDS 45.0%
ATGGATCGGATACTAAGACC+TGG - chr3_3:85461614-85461633 Msa0480230:CDS 45.0%
CCGTGATTCTCTTGCCATAA+TGG - chr3_3:85461652-85461671 Msa0480230:CDS 45.0%
AGATTGCCAAAGCAATAGGC+TGG - chr3_3:85461687-85461706 Msa0480230:CDS 45.0%
ATTGTTCACTGCCTCTTGTG+AGG + chr3_3:85461915-85461934 None:intergenic 45.0%
!! ATAGCAGGTATTGGACTACG+TGG + chr3_3:85462097-85462116 None:intergenic 45.0%
!! TATTATAAATAAACATTATA+GGG + chr3_3:85459677-85459696 None:intergenic 5.0%
!! TTATTATAAATAAACATTAT+AGG + chr3_3:85459678-85459697 None:intergenic 5.0%
CTTCACACAAAACTCCGACC+CGG - chr3_3:85457967-85457986 Msa0480230:CDS 50.0%
ATTGTGATTGGGATCCGGGT+CGG + chr3_3:85457984-85458003 None:intergenic 50.0%
AATTTCTCCACCGAATCCGC+CGG + chr3_3:85458142-85458161 None:intergenic 50.0%
!! GCGGATTCGGTGGAGAAATT+CGG - chr3_3:85458142-85458161 Msa0480230:CDS 50.0%
!! CGGATTCGGTGGAGAAATTC+GGG - chr3_3:85458143-85458162 Msa0480230:intron 50.0%
TTCGGGATCGTGAACGAGAA+TGG - chr3_3:85458160-85458179 Msa0480230:intron 50.0%
CGAGAATGGAACAATGTCGG+AGG - chr3_3:85458174-85458193 Msa0480230:intron 50.0%
!! ATCCAGCGATGGTGGATGAT+TGG - chr3_3:85458218-85458237 Msa0480230:intron 50.0%
!! TCCAGCGATGGTGGATGATT+GGG - chr3_3:85458219-85458238 Msa0480230:intron 50.0%
GAACGGCATTGTCCTGAAGA+TGG - chr3_3:85458403-85458422 Msa0480230:intron 50.0%
! GCACGATAACCTTTAGGAGC+AGG + chr3_3:85458451-85458470 None:intergenic 50.0%
!! CTGCTTTTGGGCCATGGAAT+TGG + chr3_3:85458475-85458494 None:intergenic 50.0%
!! TCATCTCTGCTTTTGGGCCA+TGG + chr3_3:85458481-85458500 None:intergenic 50.0%
ATGGCCCAAAAGCAGAGATG+AGG - chr3_3:85458480-85458499 Msa0480230:intron 50.0%
ACACGGCGCAGATGAATACT+TGG - chr3_3:85458731-85458750 Msa0480230:intron 50.0%
ATCCTTGGGAGCTACAGACA+TGG + chr3_3:85459115-85459134 None:intergenic 50.0%
! TCAGTTTGCTCTTGAGCGTG+GGG - chr3_3:85459152-85459171 Msa0480230:CDS 50.0%
AGTTGCAAATGCTGCCACCA+TGG + chr3_3:85459184-85459203 None:intergenic 50.0%
ATCTTACCACTCGACTCTGC+TGG - chr3_3:85459939-85459958 Msa0480230:intron 50.0%
AAACTTCCAGCAGAGTCGAG+TGG + chr3_3:85459948-85459967 None:intergenic 50.0%
! GAGGTTTAGTTCCTGCCTCA+CGG + chr3_3:85460033-85460052 None:intergenic 50.0%
TCACTTGGGTCACATAGAGG+AGG + chr3_3:85460052-85460071 None:intergenic 50.0%
! ATGGACATGCGAGCAGGTTT+TGG - chr3_3:85460736-85460755 Msa0480230:intron 50.0%
!!! ACATGCGAGCAGGTTTTGGA+GGG - chr3_3:85460740-85460759 Msa0480230:intron 50.0%
! AAGGTGTTTGGACCACTGAC+AGG + chr3_3:85460940-85460959 None:intergenic 50.0%
CATACCTGCTCTCTGTTGAG+AGG - chr3_3:85461173-85461192 Msa0480230:intron 50.0%
GATCGGATACTAAGACCTGG+TGG - chr3_3:85461617-85461636 Msa0480230:CDS 50.0%
! ATAACTTGCATGAGGCCCCT+CGG + chr3_3:85461735-85461754 None:intergenic 50.0%
AGGGGCCTCATGCAAGTTAT+AGG - chr3_3:85461735-85461754 Msa0480230:CDS 50.0%
GGGGCCTCATGCAAGTTATA+GGG - chr3_3:85461736-85461755 Msa0480230:CDS 50.0%
GCTACGCGCTTGAAACAATG+AGG - chr3_3:85461781-85461800 Msa0480230:CDS 50.0%
ACGCGCTTGAAACAATGAGG+TGG - chr3_3:85461784-85461803 Msa0480230:CDS 50.0%
GACGTATGCAGCAGCTGTTT+GGG + chr3_3:85461975-85461994 None:intergenic 50.0%
CGGTGGAGGAGGTTGTGTTA+GGG + chr3_3:85458083-85458102 None:intergenic 55.0%
ACGGTGGAGGAGGTTGTGTT+AGG + chr3_3:85458084-85458103 None:intergenic 55.0%
ACCCAATCATCCACCATCGC+TGG + chr3_3:85458223-85458242 None:intergenic 55.0%
AAGTTGCCGTCGACGGAGAA+AGG - chr3_3:85458370-85458389 Msa0480230:intron 55.0%
CTCTCACCTTTCTCCGTCGA+CGG + chr3_3:85458379-85458398 None:intergenic 55.0%
CACCATGTCTGTAGCTCCCA+AGG - chr3_3:85459110-85459129 Msa0480230:CDS 55.0%
CGCTGTCAGGGTCATCACTT+GGG + chr3_3:85460066-85460085 None:intergenic 55.0%
ACGCTGTCAGGGTCATCACT+TGG + chr3_3:85460067-85460086 None:intergenic 55.0%
GTGATGACCCTGACAGCGTT+TGG - chr3_3:85460068-85460087 Msa0480230:intron 55.0%
CGCAGGCCAATCGGTAATGT+TGG + chr3_3:85460560-85460579 None:intergenic 55.0%
TTGCAAACGCGCAGGCCAAT+CGG + chr3_3:85460569-85460588 None:intergenic 55.0%
!! GACATGCGAGCAGGTTTTGG+AGG - chr3_3:85460739-85460758 Msa0480230:intron 55.0%
AGAGCAGGTATGCTGCATGC+AGG + chr3_3:85461165-85461184 None:intergenic 55.0%
CGGATGTATACACGTCCACC+AGG + chr3_3:85461635-85461654 None:intergenic 55.0%
TGCGTGCCAGCCTATTGCTT+TGG + chr3_3:85461696-85461715 None:intergenic 55.0%
GGACGTATGCAGCAGCTGTT+TGG + chr3_3:85461976-85461995 None:intergenic 55.0%
TGGGAGCTTCGATCCAGCGA+TGG - chr3_3:85458207-85458226 Msa0480230:intron 60.0%
GAGCTTCGATCCAGCGATGG+TGG - chr3_3:85458210-85458229 Msa0480230:intron 60.0%
TGCTCTTGAGCGTGGGGTAC+CGG - chr3_3:85459158-85459177 Msa0480230:CDS 60.0%
GCAAATGCTGCCACCATGGC+CGG + chr3_3:85459180-85459199 None:intergenic 60.0%
ATCACTCCGTGACACAGCCG+AGG - chr3_3:85461715-85461734 Msa0480230:CDS 60.0%
TCACTCCGTGACACAGCCGA+GGG - chr3_3:85461716-85461735 Msa0480230:CDS 60.0%
TTCTCCACCGAATCCGCCGG+CGG + chr3_3:85458139-85458158 None:intergenic 65.0%
GGTGGGGTTTGCAAACGCGC+AGG + chr3_3:85460577-85460596 None:intergenic 65.0%
CACTCCGTGACACAGCCGAG+GGG - chr3_3:85461717-85461736 Msa0480230:CDS 65.0%
!! GGTGACGGTGGTGGCGGTGA+CGG + chr3_3:85458103-85458122 None:intergenic 70.0%
!! GGTGGTGGTGACGGTGGTGG+CGG + chr3_3:85458109-85458128 None:intergenic 70.0%
!! GGTGGTGGTGGTGACGGTGG+TGG + chr3_3:85458112-85458131 None:intergenic 70.0%
!! GGTGGCGGTGGTGGTGGTGA+CGG + chr3_3:85458118-85458137 None:intergenic 70.0%
!! TGAGCGTGGGGTACCGGCCA+TGG - chr3_3:85459164-85459183 Msa0480230:CDS 70.0%
GAGGCCCCTCGGCTGTGTCA+CGG + chr3_3:85461724-85461743 None:intergenic 70.0%
! GGTGGCGGTGACGGTGGAGG+AGG + chr3_3:85458094-85458113 None:intergenic 75.0%
!! GGTGGTGGCGGTGACGGTGG+AGG + chr3_3:85458097-85458116 None:intergenic 75.0%
!! GACGGTGGTGGCGGTGACGG+TGG + chr3_3:85458100-85458119 None:intergenic 75.0%
!! GGCGGTGGTGGTGGTGACGG+TGG + chr3_3:85458115-85458134 None:intergenic 75.0%
ACCACCACCACCGCCACCGC+CGG - chr3_3:85458120-85458139 Msa0480230:CDS 75.0%
! ACCGCCACCGCCGGCGGATT+CGG - chr3_3:85458129-85458148 Msa0480230:CDS 75.0%
ACCGAATCCGCCGGCGGTGG+CGG + chr3_3:85458133-85458152 None:intergenic 75.0%
TCCACCGAATCCGCCGGCGG+TGG + chr3_3:85458136-85458155 None:intergenic 75.0%
!! GCGTGGGGTACCGGCCATGG+TGG - chr3_3:85459167-85459186 Msa0480230:CDS 75.0%
! ACCACCACCGCCACCGCCGG+CGG - chr3_3:85458123-85458142 Msa0480230:CDS 80.0%
!! GAATCCGCCGGCGGTGGCGG+TGG + chr3_3:85458130-85458149 None:intergenic 80.0%
!! GCCACCGCCGGCGGATTCGG+TGG - chr3_3:85458132-85458151 Msa0480230:CDS 80.0%
!! GCCGGCGGTGGCGGTGGTGG+TGG + chr3_3:85458124-85458143 None:intergenic 85.0%
!! TCCGCCGGCGGTGGCGGTGG+TGG + chr3_3:85458127-85458146 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 85457582 85462165 85457582 ID=Msa0480230;Name=Msa0480230
chr3_3 mRNA 85457582 85462165 85457582 ID=Msa0480230-mRNA-1;Parent=Msa0480230;Name=Msa0480230-mRNA-1;_AED=0.10;_eAED=0.10;_QI=254|1|1|1|1|1|9|372|674
chr3_3 exon 85457582 85458161 85457582 ID=Msa0480230-mRNA-1:exon:24573;Parent=Msa0480230-mRNA-1
chr3_3 exon 85458547 85458624 85458547 ID=Msa0480230-mRNA-1:exon:24572;Parent=Msa0480230-mRNA-1
chr3_3 exon 85458743 85458865 85458743 ID=Msa0480230-mRNA-1:exon:24571;Parent=Msa0480230-mRNA-1
chr3_3 exon 85458986 85459243 85458986 ID=Msa0480230-mRNA-1:exon:24570;Parent=Msa0480230-mRNA-1
chr3_3 exon 85459658 85459817 85459658 ID=Msa0480230-mRNA-1:exon:24569;Parent=Msa0480230-mRNA-1
chr3_3 exon 85460231 85460341 85460231 ID=Msa0480230-mRNA-1:exon:24568;Parent=Msa0480230-mRNA-1
chr3_3 exon 85460468 85460738 85460468 ID=Msa0480230-mRNA-1:exon:24567;Parent=Msa0480230-mRNA-1
chr3_3 exon 85460980 85461129 85460980 ID=Msa0480230-mRNA-1:exon:24566;Parent=Msa0480230-mRNA-1
chr3_3 exon 85461246 85462165 85461246 ID=Msa0480230-mRNA-1:exon:24565;Parent=Msa0480230-mRNA-1
chr3_3 five_prime_UTR 85461912 85462165 85461912 ID=Msa0480230-mRNA-1:five_prime_utr;Parent=Msa0480230-mRNA-1
chr3_3 CDS 85461246 85461911 85461246 ID=Msa0480230-mRNA-1:cds;Parent=Msa0480230-mRNA-1
chr3_3 CDS 85460980 85461129 85460980 ID=Msa0480230-mRNA-1:cds;Parent=Msa0480230-mRNA-1
chr3_3 CDS 85460468 85460738 85460468 ID=Msa0480230-mRNA-1:cds;Parent=Msa0480230-mRNA-1
chr3_3 CDS 85460231 85460341 85460231 ID=Msa0480230-mRNA-1:cds;Parent=Msa0480230-mRNA-1
chr3_3 CDS 85459658 85459817 85459658 ID=Msa0480230-mRNA-1:cds;Parent=Msa0480230-mRNA-1
chr3_3 CDS 85458986 85459243 85458986 ID=Msa0480230-mRNA-1:cds;Parent=Msa0480230-mRNA-1
chr3_3 CDS 85458743 85458865 85458743 ID=Msa0480230-mRNA-1:cds;Parent=Msa0480230-mRNA-1
chr3_3 CDS 85458547 85458624 85458547 ID=Msa0480230-mRNA-1:cds;Parent=Msa0480230-mRNA-1
chr3_3 CDS 85457954 85458161 85457954 ID=Msa0480230-mRNA-1:cds;Parent=Msa0480230-mRNA-1
chr3_3 three_prime_UTR 85457582 85457953 85457582 ID=Msa0480230-mRNA-1:three_prime_utr;Parent=Msa0480230-mRNA-1
Gene Sequence

>Msa0480230

ATGAAATCACCAATCAATGTCGATTTTCTCAAAACAACCAACGCTCTCAAAATCGTTGCTTTCTTCTTCATTTCCTTCACTTTCTTCTACTTAGGTAAACATTGGTCCGATGGATACCAACAACTCATCTTCTTCACACAAAACTCCGACCCGGATCCCAATCACAATCCAAATCAAGCTGTTTCAATTTCCCCTAATTTCAATAAAAACTTCAACCTTTCCGCACTAATCGATCAAGAAAAAACCCTAACACAACCTCCTCCACCGTCACCGCCACCACCGTCACCACCACCACCGCCACCGCCGGCGGATTCGGTGGAGAAATTCGGGATCGTGAACGAGAATGGAACAATGTCGGAGGAGTTTGAGATTGGGAGCTTCGATCCAGCGATGGTGGATGATTGGGTTAACGAAACGCAAGTTGAGAAGGAAGGTTCTGAGAGTGTTACGAAATTTGCGATCAAGAAATTTGGATTGTGTTCACGAGGTATGAGTGAGTATATACCTTGTTTGGATAATGTAGAAGCGATTAAGAAGTTGCCGTCGACGGAGAAAGGTGAGAGATTTGAACGGCATTGTCCTGAAGATGGTAAAAAGTTGAATTGTTTGGTTCCTGCTCCTAAAGGTTATCGTGCTCCAATTCCATGGCCCAAAAGCAGAGATGAGGTATGGTTCAGTAATGTTCCTCATACTCGTCTTGTTGAAGATAAAGGTGGCCAAAACTGGATTTCAAGAGACAAAGATAAGTTTAAATTTCCAGGAGGTGGTACACAATTTATACACGGCGCAGATGAATACTTGGACCATATTTCTAAGATGATTCCTGAAATTACATTTGGTCGGCATATACGAGTTGCTCTTGATGTTGGTTGTGGTGTTGCTAGTTTTGGTGCGTACTTACTGCAACGGAATGTCGTCACCATGTCTGTAGCTCCCAAGGATGTTCATGAGAATCAGATTCAGTTTGCTCTTGAGCGTGGGGTACCGGCCATGGTGGCAGCATTTGCAACTAGACGTTTATTATATCCTAGTCAGGCTTTTGACTTGATACACTGTTCTCGCTGTAGAATTAATTGGACTCGAGATGATGGGATATTGCTGCTTGAAGTTAATAGGATGCTTAGAGCAGGAGGGTATTTTGTTTGGGCTGCCCAACCAGTTTATAAGCACGAAGAAGCTTTAGAAGAACAATGGGAAGAGATGCTTAATCTTACCACTCGACTCTGCTGGAAGTTTTTGAAAAAAGATGGCTACATTGCAGTATGGCAGAAACCTTTTGACAATAGCTGCTATTTAAACCGTGAGGCAGGAACTAAACCTCCTCTATGTGACCCAAGTGATGACCCTGACAGCGTTTGGTATGTTGATCTAAAAGCATGCATCTCTGAATTGCCTAAGAATGAATATGAAGCCAACATTACCGATTGGCCTGCGCGTTTGCAAACCCCACCTAATAGGCTTCAAAGTATAAAAGTTGATGCTTTCATATCCAGAAAAGAGCTTTTTAAGGCAGAATCAAAATACTGGAATGAGATAATAGAAGCTTATGTTCGTGCTTTGCACTGGAAGAAAATAAGATTAAGAAATGTTATGGACATGCGAGCAGGTTTTGGAGGATTTGCAGCAGCATTGATTAAGCAGAAACTTGACAGCTGGGTTATGAATGTTGTTCCTGTCAGTGGTCCAAACACCTTGCCTGTCATATATGACCGTGGATTGATTGGAGTTATGCATGACTGGTGTGAACCATTTGACACCTATCCGAGAACCTATGATTTCCTGCATGCAGCATACCTGCTCTCTGTTGAGAGGAAAAGATGCAATGTGTCATCGATTATGGTTGAGATGGATCGGATACTAAGACCTGGTGGACGTGTATACATCCGTGATTCTCTTGCCATAATGGATGAGCTTCAAGAGATTGCCAAAGCAATAGGCTGGCACGCATCACTCCGTGACACAGCCGAGGGGCCTCATGCAAGTTATAGGGTATTGGTTTGTGATAAGCATCTGCTACGCGCTTGA
Protein sequence

>Msa0480230

MKSPINVDFLKTTNALKIVAFFFISFTFFYLGKHWSDGYQQLIFFTQNSDPDPNHNPNQAVSISPNFNKNFNLSALIDQEKTLTQPPPPSPPPPSPPPPPPPADSVEKFGIVNENGTMSEEFEIGSFDPAMVDDWVNETQVEKEGSESVTKFAIKKFGLCSRGMSEYIPCLDNVEAIKKLPSTEKGERFERHCPEDGKKLNCLVPAPKGYRAPIPWPKSRDEVWFSNVPHTRLVEDKGGQNWISRDKDKFKFPGGGTQFIHGADEYLDHISKMIPEITFGRHIRVALDVGCGVASFGAYLLQRNVVTMSVAPKDVHENQIQFALERGVPAMVAAFATRRLLYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEALEEQWEEMLNLTTRLCWKFLKKDGYIAVWQKPFDNSCYLNREAGTKPPLCDPSDDPDSVWYVDLKACISELPKNEYEANITDWPARLQTPPNRLQSIKVDAFISRKELFKAESKYWNEIIEAYVRALHWKKIRLRNVMDMRAGFGGFAAALIKQKLDSWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDFLHAAYLLSVERKRCNVSSIMVEMDRILRPGGRVYIRDSLAIMDELQEIAKAIGWHASLRDTAEGPHASYRVLVCDKHLLRA*