AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1449090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1449090 MtrunA17_Chr3g0112341 97.774 674 11 1 1 674 1 670 0.0 1377
Msa1449090 MtrunA17_Chr5g0435751 73.323 656 124 6 16 669 11 617 0.0 997
Msa1449090 MtrunA17_Chr1g0159741 66.381 583 181 5 98 671 82 658 0.0 832
Msa1449090 MtrunA17_Chr3g0125511 49.109 505 242 7 165 657 232 733 9.84e-175 516
Msa1449090 MtrunA17_Chr3g0130381 45.652 552 273 11 111 651 224 759 1.80e-169 504
Msa1449090 MtrunA17_Chr8g0384431 44.704 557 279 11 111 654 252 792 8.84e-168 501
Msa1449090 MtrunA17_Chr1g0187601 47.937 509 242 9 155 649 89 588 7.23e-167 492
Msa1449090 MtrunA17_Chr1g0183721 48.337 511 243 9 159 656 64 566 1.79e-166 490
Msa1449090 MtrunA17_Chr1g0167381 44.933 523 269 7 137 647 72 587 2.43e-164 486
Msa1449090 MtrunA17_Chr8g0372471 47.544 509 245 11 156 652 376 874 1.06e-162 490
Msa1449090 MtrunA17_Chr5g0437501 43.986 557 270 12 113 652 62 593 2.22e-162 480
Msa1449090 MtrunA17_Chr3g0113981 47.000 500 245 11 159 650 167 654 3.66e-160 476
Msa1449090 MtrunA17_Chr7g0246701 44.000 550 274 14 144 674 93 627 1.30e-152 456
Msa1449090 MtrunA17_Chr8g0350391 43.820 534 272 12 160 674 108 632 5.01e-152 454
Msa1449090 MtrunA17_Chr8g0361791 44.841 533 261 12 155 670 82 598 6.08e-151 451
Msa1449090 MtrunA17_Chr6g0472571 42.694 527 274 11 160 669 108 623 2.34e-150 450
Msa1449090 MtrunA17_Chr8g0388881 41.744 539 289 10 147 669 88 617 2.61e-149 447
Msa1449090 MtrunA17_Chr8g0369481 43.478 529 274 10 157 671 70 587 2.00e-148 444
Msa1449090 MtrunA17_Chr1g0203741 42.266 556 281 15 140 669 73 614 3.80e-147 442
Msa1449090 MtrunA17_Chr7g0214551 43.238 525 274 12 154 661 40 557 1.46e-145 435
Msa1449090 MtrunA17_Chr5g0416991 43.715 533 266 11 155 670 82 597 2.22e-145 436
Msa1449090 MtrunA17_Chr4g0055031 42.750 531 276 11 155 670 84 601 3.48e-145 436
Msa1449090 MtrunA17_Chr5g0409411 43.993 541 276 11 147 671 60 589 3.88e-144 432
Msa1449090 MtrunA17_Chr3g0092501 42.218 559 287 15 128 669 55 594 8.70e-144 432
Msa1449090 MtrunA17_Chr8g0350351 42.912 522 271 12 160 669 91 597 1.93e-141 426
Msa1449090 MtrunA17_Chr1g0171781 43.609 532 280 8 150 669 77 600 6.20e-141 425
Msa1449090 MtrunA17_Chr7g0246681 42.830 530 274 12 155 671 73 586 2.24e-140 422
Msa1449090 MtrunA17_Chr1g0155141 40.472 509 266 14 156 651 198 682 6.59e-123 381
Msa1449090 MtrunA17_Chr3g0115931 35.390 551 323 13 145 669 142 685 1.22e-111 352
Msa1449090 MtrunA17_Chr5g0426281 34.508 539 314 12 155 669 144 667 7.55e-108 341
Msa1449090 MtrunA17_Chr5g0404771 50.519 289 138 3 130 415 290 576 2.81e-94 303
Msa1449090 MtrunA17_Chr5g0404761 39.179 268 147 7 401 657 1 263 6.95e-61 205
Msa1449090 MtrunA17_Chr4g0043121 34.796 319 192 8 155 462 84 397 5.10e-56 196
Msa1449090 MtrunA17_Chr4g0043131 48.649 148 73 2 527 673 39 184 1.07e-41 149
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1449090 AT2G39750.1 69.231 702 180 5 1 674 1 694 0.0 1019
Msa1449090 AT5G06050.1 67.994 678 195 6 1 671 1 663 0.0 979
Msa1449090 AT1G77260.1 63.839 672 220 5 3 671 4 655 0.0 918
Msa1449090 AT3G51070.1 49.307 505 239 9 159 651 373 872 3.17e-172 515
Msa1449090 AT5G64030.1 45.966 533 271 9 136 656 277 804 1.31e-170 509
Msa1449090 AT2G34300.2 47.556 532 261 8 138 656 219 745 4.07e-170 506
Msa1449090 AT2G34300.3 47.556 532 261 8 138 656 219 745 4.07e-170 506
Msa1449090 AT2G34300.1 47.556 532 261 8 138 656 219 745 4.07e-170 506
Msa1449090 AT1G29470.1 46.415 530 268 8 139 657 222 746 6.86e-169 503
Msa1449090 AT1G29470.2 46.415 530 268 8 139 657 222 746 6.86e-169 503
Msa1449090 AT2G40280.1 48.509 503 239 10 156 651 79 568 6.89e-169 496
Msa1449090 AT4G14360.1 47.244 508 249 8 152 647 71 571 1.35e-167 493
Msa1449090 AT4G14360.2 47.244 508 249 8 152 647 71 571 1.35e-167 493
Msa1449090 AT3G23300.2 47.093 516 254 8 152 655 74 582 1.63e-167 493
Msa1449090 AT3G23300.1 47.093 516 254 8 152 655 74 582 1.63e-167 493
Msa1449090 AT3G56080.1 47.984 496 234 9 166 651 114 595 2.61e-164 485
Msa1449090 AT1G04430.1 44.527 539 280 7 123 649 50 581 4.08e-161 478
Msa1449090 AT1G04430.3 44.527 539 280 7 123 649 50 581 4.08e-161 478
Msa1449090 AT1G04430.2 44.527 539 280 7 123 649 50 581 4.08e-161 478
Msa1449090 AT3G51070.2 50.435 460 211 9 159 606 373 827 3.39e-156 472
Msa1449090 AT4G10440.1 42.831 551 261 12 150 669 86 613 3.21e-152 455
Msa1449090 AT1G33170.1 42.857 546 271 12 149 669 102 631 4.79e-152 455
Msa1449090 AT5G14430.1 45.287 541 272 11 148 671 70 603 4.48e-151 451
Msa1449090 AT2G45750.1 43.407 546 273 11 149 670 80 613 9.10e-151 451
Msa1449090 AT3G56080.2 49.224 451 205 9 166 606 114 550 6.28e-150 446
Msa1449090 AT5G14430.2 44.917 541 274 11 148 671 70 603 4.24e-149 446
Msa1449090 AT4G19120.1 43.948 537 262 13 157 671 70 589 2.42e-148 444
Msa1449090 AT4G19120.2 43.948 537 262 13 157 671 70 589 2.42e-148 444
Msa1449090 AT1G26850.2 43.527 533 276 11 154 670 83 606 1.35e-146 440
Msa1449090 AT1G26850.1 43.527 533 276 11 154 670 83 606 1.35e-146 440
Msa1449090 AT5G04060.1 42.994 521 276 9 159 669 85 594 1.77e-142 429
Msa1449090 AT1G31850.1 41.728 544 292 11 143 671 62 595 1.73e-141 426
Msa1449090 AT1G31850.2 41.728 544 292 11 143 671 62 595 1.73e-141 426
Msa1449090 AT1G31850.4 41.728 544 292 11 143 671 62 595 1.73e-141 426
Msa1449090 AT1G31850.3 41.728 544 292 11 143 671 62 595 1.73e-141 426
Msa1449090 AT4G00750.1 41.636 550 286 12 148 674 87 624 3.12e-141 427
Msa1449090 AT2G43200.2 41.917 532 280 15 157 671 91 610 4.36e-140 423
Msa1449090 AT2G43200.1 41.917 532 280 15 157 671 91 610 4.36e-140 423
Msa1449090 AT4G18030.1 42.830 530 274 13 157 670 85 601 6.29e-139 420
Msa1449090 AT4G00740.1 42.713 494 258 9 190 671 112 592 3.05e-138 418
Msa1449090 AT4G00740.2 42.713 494 258 9 190 671 112 592 3.05e-138 418
Msa1449090 AT3G10200.1 40.918 523 290 7 157 669 72 585 3.69e-133 404
Msa1449090 AT3G10200.2 42.706 473 253 6 159 622 74 537 4.30e-128 392
Msa1449090 AT1G19430.1 40.514 506 265 13 159 651 223 705 6.92e-124 385
Msa1449090 AT1G19430.3 40.514 506 265 13 159 651 223 705 6.92e-124 385
Msa1449090 AT4G19120.3 44.170 446 211 12 157 580 70 499 9.21e-118 362
Msa1449090 AT1G26850.3 42.755 421 217 10 154 559 83 494 3.41e-106 332
Msa1449090 AT1G78240.1 33.088 544 324 11 155 669 144 676 1.91e-102 328
Msa1449090 AT1G78240.2 33.088 544 324 11 155 669 144 676 1.91e-102 328
Msa1449090 AT1G13860.4 33.761 545 316 13 154 673 78 602 3.93e-96 308
Msa1449090 AT1G13860.3 33.761 545 316 13 154 673 78 602 3.93e-96 308
Msa1449090 AT1G13860.1 33.761 545 316 13 154 673 78 602 3.93e-96 308
Msa1449090 AT1G13860.5 33.761 545 316 13 154 673 78 602 3.93e-96 308
Msa1449090 AT2G03480.2 33.578 545 306 13 153 673 82 594 8.97e-95 305
Msa1449090 AT2G03480.1 34.495 545 312 16 153 673 82 605 4.85e-94 303
Msa1449090 AT1G13860.2 35.333 450 262 11 246 673 4 446 6.14e-84 272
Msa1449090 AT1G19430.2 36.294 394 218 11 159 540 223 595 5.53e-75 253
Msa1449090 AT2G03480.3 32.508 323 198 9 153 462 82 397 5.58e-47 172

Find 202 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTTCATAGTTTGATTTA+TGG 0.143238 tig0032435:+34993 None:intergenic
TTTGACCTCATCTCTGCTTT+TGG 0.173231 tig0032435:+34330 None:intergenic
TGGGATCCGGGTCGGAGTTT+TGG 0.185266 tig0032435:+34842 None:intergenic
AAATTTGCGATCAAGAAATT+TGG 0.186954 tig0032435:-34529 Msa1449090:CDS
GTTCTCGCTGTAGAATTAAT+TGG 0.208243 tig0032435:-33568 Msa1449090:CDS
TTTATACTTTGAAGCCTATT+AGG 0.228592 tig0032435:+32220 None:intergenic
ACGGTGGAGGAGGTTGTGTT+AGG 0.258997 tig0032435:+34734 None:intergenic
AAAGATAAGTTTAAATTTCC+AGG 0.291290 tig0032435:-34125 Msa1449090:CDS
GAAATTGAAACAGCTTGATT+TGG 0.293480 tig0032435:+34811 None:intergenic
CCGTGATTCTCTTGCCATAA+TGG 0.295909 tig0032435:-31163 Msa1449090:CDS
ACTCAGTTTCCTCGTTTAAC+AGG 0.300596 tig0032435:+35190 None:intergenic
ATGGACATGCGAGCAGGTTT+TGG 0.301982 tig0032435:-32079 Msa1449090:CDS
TGTCTCTTGAAATCCAGTTT+TGG 0.302913 tig0032435:+34147 None:intergenic
TTGGCTTCATATTCATTCTT+AGG 0.303582 tig0032435:+32277 None:intergenic
GTTTGCAAACCCCACCTAAT+AGG 0.304296 tig0032435:-32234 Msa1449090:CDS
ATACTTGGACCATATTTCTA+AGG 0.313021 tig0032435:-34069 Msa1449090:intron
AAGATAAAGGTGGCCAAAAC+TGG 0.314752 tig0032435:-34160 Msa1449090:CDS
GGTTGTGGTGTTGCTAGTTT+TGG 0.315802 tig0032435:-33755 Msa1449090:CDS
TATTGCTGCTTGAAGTTAAT+AGG 0.316128 tig0032435:-33403 Msa1449090:CDS
CTCTTGAAGCTCATCCATTA+TGG 0.321098 tig0032435:+31149 None:intergenic
TTAAGGCAGAATCAAAATAC+TGG 0.321623 tig0032435:-32165 Msa1449090:CDS
AGTAAGTAACCTTAGAAATA+TGG 0.322467 tig0032435:+34060 None:intergenic
AGGGGCCTCATGCAAGTTAT+AGG 0.326524 tig0032435:-31080 Msa1449090:CDS
TGCCGACCAAATGTAATTTC+AGG 0.330987 tig0032435:+33800 None:intergenic
GCGGATTCGGTGGAGAAATT+CGG 0.331054 tig0032435:-34673 Msa1449090:CDS
TGTTTATTTATTTATACTAC+TGG 0.349678 tig0032435:-30880 Msa1449090:three_prime_UTR
TCCGCCGGCGGTGGCGGTGG+TGG 0.351251 tig0032435:+34691 None:intergenic
ACCGCCACCGCCGGCGGATT+CGG 0.356017 tig0032435:-34686 Msa1449090:CDS
AATTATACAAATAAGTTAGA+TGG 0.356308 tig0032435:+30813 None:intergenic
ATCCAGCGATGGTGGATGAT+TGG 0.359949 tig0032435:-34597 Msa1449090:CDS
GCTTCTTCGTGCTTATAAAC+TGG 0.360554 tig0032435:+33341 None:intergenic
ATGATTCCTGAAATTACATT+TGG 0.368026 tig0032435:-33806 Msa1449090:CDS
AATAAGATTAAGAAATGTTA+TGG 0.375972 tig0032435:-32098 Msa1449090:CDS
CACTTATAAGTGAAGCTGTT+TGG 0.380664 tig0032435:-30669 None:intergenic
ATGCAATGTGTCATCGATTA+TGG 0.382671 tig0032435:-31229 Msa1449090:CDS
ATTGGAGCACGATAACCTTT+AGG 0.384211 tig0032435:+34361 None:intergenic
TGCTCTTGAGCGTGGGGTAC+CGG 0.392506 tig0032435:-33657 Msa1449090:CDS
ACTCGTCTTGTTGAAGATAA+AGG 0.394264 tig0032435:-34173 Msa1449090:CDS
GGACGTATGCAGCAGCTGTT+TGG 0.396822 tig0032435:+30842 None:intergenic
CTGATTCTCATGAACATCCT+TGG 0.400399 tig0032435:+33688 None:intergenic
CGGTGGAGGAGGTTGTGTTA+GGG 0.400490 tig0032435:+34735 None:intergenic
TCATGCAAGTTATAGGGTAT+TGG 0.402166 tig0032435:-31073 Msa1449090:CDS
TTCGGGATCGTGAACGAGAA+TGG 0.402853 tig0032435:-34655 Msa1449090:CDS
CAAGAGATTGCCAAAGCAAT+AGG 0.404996 tig0032435:-31132 Msa1449090:CDS
CGGATTCGGTGGAGAAATTC+GGG 0.405279 tig0032435:-34672 Msa1449090:CDS
ACCGAATCCGCCGGCGGTGG+CGG 0.405756 tig0032435:+34685 None:intergenic
GAGTGAGTATATACCTTGTT+TGG 0.406292 tig0032435:-34488 Msa1449090:CDS
TATATGACAGGCAAGGTGTT+TGG 0.412497 tig0032435:+31866 None:intergenic
AGCTTGATTTGGATTGTGAT+TGG 0.414325 tig0032435:+34822 None:intergenic
AAACAATACCAAACGCTGTC+AGG 0.417389 tig0032435:+32739 None:intergenic
TCCTTCACTTTCTTCTACTT+AGG 0.419363 tig0032435:-34907 Msa1449090:CDS
GACGTATGCAGCAGCTGTTT+GGG 0.420634 tig0032435:+30843 None:intergenic
GGTGGTGGTGGTGACGGTGG+TGG 0.421127 tig0032435:+34706 None:intergenic
TTGGATTGTGATTGGGATCC+GGG 0.423050 tig0032435:+34830 None:intergenic
TAAACATAAATAGCAGGTAT+TGG 0.426926 tig0032435:+30712 None:intergenic
TTGAGAAAATCGACATTGAT+TGG 0.427177 tig0032435:+34970 None:intergenic
TGAGCGTGGGGTACCGGCCA+TGG 0.427310 tig0032435:-33651 Msa1449090:CDS
ATGTCGGAGGAGTTTGAGAT+TGG 0.432634 tig0032435:-34628 Msa1449090:CDS
GAATCCGCCGGCGGTGGCGG+TGG 0.434889 tig0032435:+34688 None:intergenic
TCCAGCGATGGTGGATGATT+GGG 0.440642 tig0032435:-34596 Msa1449090:CDS
GCCGGCGGTGGCGGTGGTGG+TGG 0.441811 tig0032435:+34694 None:intergenic
CTTCGTGCTTATAAACTGGT+TGG 0.446035 tig0032435:+33345 None:intergenic
TGATTCTCATGAACATCCTT+GGG 0.446417 tig0032435:+33689 None:intergenic
TTTGGATTGTGATTGGGATC+CGG 0.446440 tig0032435:+34829 None:intergenic
ACGTTTATTATATCCTAGTC+AGG 0.448437 tig0032435:-33609 Msa1449090:CDS
TGCTCTCTGTTGAGAGGAAA+AGG 0.448948 tig0032435:-31636 Msa1449090:intron
GGGGCCTCATGCAAGTTATA+GGG 0.449263 tig0032435:-31079 Msa1449090:CDS
TGTTTGGTTCCTGCTCCTAA+AGG 0.451586 tig0032435:-34376 Msa1449090:CDS
GGTGACGGTGGTGGCGGTGA+CGG 0.453390 tig0032435:+34715 None:intergenic
ATCTTACCACTCGACTCTGC+TGG 0.457963 tig0032435:-32876 Msa1449090:CDS
AAGTTGCCGTCGACGGAGAA+AGG 0.460240 tig0032435:-34445 Msa1449090:CDS
TGCGTGCCAGCCTATTGCTT+TGG 0.465307 tig0032435:+31122 None:intergenic
TTCGTGCTTATAAACTGGTT+GGG 0.467536 tig0032435:+33346 None:intergenic
GCTTGATTTGGATTGTGATT+GGG 0.467657 tig0032435:+34823 None:intergenic
TTCAGTTTGCTCTTGAGCGT+GGG 0.467667 tig0032435:-33664 Msa1449090:CDS
TTGCAAACGCGCAGGCCAAT+CGG 0.473912 tig0032435:+32249 None:intergenic
AAGTTTAAATTTCCAGGAGG+TGG 0.475407 tig0032435:-34119 Msa1449090:CDS
TACTTTGAAGCCTATTAGGT+GGG 0.475555 tig0032435:+32224 None:intergenic
TCATAGTTTGATTTATGGAT+CGG 0.475999 tig0032435:+34998 None:intergenic
GGTGGTGGTGACGGTGGTGG+CGG 0.476414 tig0032435:+34709 None:intergenic
AAATAGCAGCTATTGTCAAA+AGG 0.476652 tig0032435:+32811 None:intergenic
GCAAATGCTGCCACCATGGC+CGG 0.478324 tig0032435:+33638 None:intergenic
GTGATGACCCTGACAGCGTT+TGG 0.479305 tig0032435:-32747 Msa1449090:intron
GGCGGTGGTGGTGGTGACGG+TGG 0.480424 tig0032435:+34703 None:intergenic
TTAAGCAGAAACTTGACAGC+TGG 0.480495 tig0032435:-31916 Msa1449090:CDS
CTTATGTTCGTGCTTTGCAC+TGG 0.480720 tig0032435:-32126 Msa1449090:CDS
GGTGGCGGTGACGGTGGAGG+AGG 0.486478 tig0032435:+34724 None:intergenic
AAGATGGCTACATTGCAGTA+TGG 0.487098 tig0032435:-32840 Msa1449090:CDS
GGTGGTGGCGGTGACGGTGG+AGG 0.487246 tig0032435:+34721 None:intergenic
ATATATGACCGTGGATTGAT+TGG 0.487341 tig0032435:-31848 Msa1449090:CDS
TGCTATTTAAACCGTGAGGC+AGG 0.489764 tig0032435:-32796 Msa1449090:CDS
TCTTCAACAAGACGAGTATG+AGG 0.492603 tig0032435:+34179 None:intergenic
GGTGGCGGTGGTGGTGGTGA+CGG 0.493668 tig0032435:+34700 None:intergenic
GAACGGCATTGTCCTGAAGA+TGG 0.494620 tig0032435:-34412 Msa1449090:CDS
TCCACCGAATCCGCCGGCGG+TGG 0.495774 tig0032435:+34682 None:intergenic
TGTCGGAGGAGTTTGAGATT+GGG 0.500106 tig0032435:-34627 Msa1449090:CDS
ACCCAATCATCCACCATCGC+TGG 0.500579 tig0032435:+34595 None:intergenic
CGCTGTCAGGGTCATCACTT+GGG 0.501410 tig0032435:+32752 None:intergenic
ATAAATTGTGTACCACCTCC+TGG 0.502746 tig0032435:+34107 None:intergenic
AGAAGCTTTAGAAGAACAAT+GGG 0.505492 tig0032435:-33324 Msa1449090:CDS
ACGCTGTCAGGGTCATCACT+TGG 0.508084 tig0032435:+32751 None:intergenic
GACTAATTTGCCATGTTATG+TGG 0.514111 tig0032435:+30975 None:intergenic
ACCACCACCACCGCCACCGC+CGG 0.515522 tig0032435:-34695 Msa1449090:CDS
ATTCAGTTTGCTCTTGAGCG+TGG 0.515706 tig0032435:-33665 Msa1449090:CDS
CGCAGGCCAATCGGTAATGT+TGG 0.517728 tig0032435:+32258 None:intergenic
GAGGCCCCTCGGCTGTGTCA+CGG 0.520089 tig0032435:+31094 None:intergenic
TGCTGCATGCAGGAAATCAT+AGG 0.521747 tig0032435:+31663 None:intergenic
GTTGCTCTTGATGTTGGTTG+TGG 0.523426 tig0032435:-33770 Msa1449090:CDS
AATGTTATGGACATGCGAGC+AGG 0.525629 tig0032435:-32085 Msa1449090:CDS
ACACGGCGCAGATGAATACT+TGG 0.527645 tig0032435:-34084 Msa1449090:CDS
CTCTCACCTTTCTCCGTCGA+CGG 0.528899 tig0032435:+34439 None:intergenic
CACCATGTCTGTAGCTCCCA+AGG 0.531675 tig0032435:-33705 Msa1449090:CDS
CGATTATGGTTGAGATGGAT+CGG 0.532137 tig0032435:-31215 Msa1449090:CDS
ATGAATGTTGTTCCTGTCAG+TGG 0.532889 tig0032435:-31890 Msa1449090:CDS
ATACGAGTTGCTCTTGATGT+TGG 0.534435 tig0032435:-33776 Msa1449090:CDS
ATTATCTAAACATAAATAGC+AGG 0.536131 tig0032435:+30706 None:intergenic
TTCCTGAAATTACATTTGGT+CGG 0.536473 tig0032435:-33802 Msa1449090:CDS
CTTGATCGATTAGTGCGGAA+AGG 0.539318 tig0032435:+34764 None:intergenic
AATTTCTCCACCGAATCCGC+CGG 0.543630 tig0032435:+34676 None:intergenic
AAGAAGCTTTAGAAGAACAA+TGG 0.544081 tig0032435:-33325 Msa1449090:CDS
GGTGGGGTTTGCAAACGCGC+AGG 0.544143 tig0032435:+32241 None:intergenic
TGCAGGAAATCATAGGTTCT+CGG 0.545388 tig0032435:+31670 None:intergenic
TGATTGGAGTTATGCATGAC+TGG 0.548867 tig0032435:-31832 Msa1449090:intron
ATACTTTGAAGCCTATTAGG+TGG 0.549050 tig0032435:+32223 None:intergenic
GCACGATAACCTTTAGGAGC+AGG 0.549495 tig0032435:+34367 None:intergenic
TAAGCAGAAACTTGACAGCT+GGG 0.549606 tig0032435:-31915 Msa1449090:CDS
ATTTATTTATACTACTGGGT+AGG 0.553132 tig0032435:-30875 Msa1449090:three_prime_UTR
GTTCTCGGATAGGTGTCAAA+TGG 0.554639 tig0032435:+31685 None:intergenic
GACGGTGGTGGCGGTGACGG+TGG 0.555432 tig0032435:+34718 None:intergenic
TTTGTCACATCTGAGATGAA+TGG 0.557954 tig0032435:+35052 None:intergenic
AAGGTGTTTGGACCACTGAC+AGG 0.559136 tig0032435:+31878 None:intergenic
GTTAATAGGATGCTTAGAGC+AGG 0.559683 tig0032435:-33389 Msa1449090:CDS
CGGATGTATACACGTCCACC+AGG 0.559739 tig0032435:+31183 None:intergenic
GAGGTTTAGTTCCTGCCTCA+CGG 0.560304 tig0032435:+32785 None:intergenic
AATAGGATGCTTAGAGCAGG+AGG 0.562811 tig0032435:-33386 Msa1449090:CDS
GAGCTTCGATCCAGCGATGG+TGG 0.563296 tig0032435:-34605 Msa1449090:CDS
TCATCACTTGGGTCACATAG+AGG 0.565821 tig0032435:+32763 None:intergenic
AGAGCAGGTATGCTGCATGC+AGG 0.566438 tig0032435:+31653 None:intergenic
ACCACCACCGCCACCGCCGG+CGG 0.566733 tig0032435:-34692 Msa1449090:CDS
GCCACCGCCGGCGGATTCGG+TGG 0.568136 tig0032435:-34683 Msa1449090:CDS
TTGGTGCGTACTTACTGCAA+CGG 0.568191 tig0032435:-33736 Msa1449090:CDS
AATCCACGGTCATATATGAC+AGG 0.568485 tig0032435:+31854 None:intergenic
GATTAAGAAGTTGCCGTCGA+CGG 0.573354 tig0032435:-34452 Msa1449090:CDS
AGATTGCCAAAGCAATAGGC+TGG 0.576012 tig0032435:-31128 Msa1449090:CDS
AAGTATCACTTCCTCACAAG+AGG 0.576224 tig0032435:-30914 Msa1449090:three_prime_UTR
TTAGGTAAACACTGGTCCGA+TGG 0.579934 tig0032435:-34889 Msa1449090:CDS
GTTTATTTATTTATACTACT+GGG 0.580764 tig0032435:-30879 Msa1449090:three_prime_UTR
ACTTTGAAGCCTATTAGGTG+GGG 0.581473 tig0032435:+32225 None:intergenic
ATTGTGATTGGGATCCGGGT+CGG 0.583505 tig0032435:+34834 None:intergenic
ATCTGAGATGAATGGAGAAG+AGG 0.585801 tig0032435:+35060 None:intergenic
GTTATCGTGCTCCAATTCCA+TGG 0.586892 tig0032435:-34354 Msa1449090:CDS
TCTTCTACTTAGGTAAACAC+TGG 0.587496 tig0032435:-34897 Msa1449090:CDS
ATTGTTCACTGCCTCTTGTG+AGG 0.588104 tig0032435:+30903 None:intergenic
AACAATACCAAACGCTGTCA+GGG 0.589427 tig0032435:+32740 None:intergenic
GATGAGTTGTTGATATCCAT+CGG 0.591269 tig0032435:+34873 None:intergenic
AGAATTAATTGGACTCGAGA+TGG 0.592617 tig0032435:-33557 Msa1449090:intron
GAAATCATAGGTTCTCGGAT+AGG 0.593141 tig0032435:+31675 None:intergenic
ATCACTCCGTGACACAGCCG+AGG 0.602179 tig0032435:-31100 Msa1449090:CDS
TAACGAAACGCAAGTTGAGA+AGG 0.603719 tig0032435:-34572 Msa1449090:CDS
ATGAAGCCAACATTACCGAT+TGG 0.604632 tig0032435:-32264 Msa1449090:CDS
ATACAGTAAACCACATAACA+TGG 0.608310 tig0032435:-30985 Msa1449090:three_prime_UTR
TCAGTTTGCTCTTGAGCGTG+GGG 0.610048 tig0032435:-33663 Msa1449090:CDS
CATACCTGCTCTCTGTTGAG+AGG 0.611929 tig0032435:-31642 Msa1449090:CDS
ATAACTTGCATGAGGCCCCT+CGG 0.612863 tig0032435:+31083 None:intergenic
TTCTCCACCGAATCCGCCGG+CGG 0.615206 tig0032435:+34679 None:intergenic
CTTCACCCAAAACTCCGACC+CGG 0.615867 tig0032435:-34848 Msa1449090:CDS
ATCAAGTCAAAAGCCTGACT+AGG 0.617662 tig0032435:+33596 None:intergenic
CCATTATGGCAAGAGAATCA+CGG 0.617800 tig0032435:+31163 None:intergenic
GTCATCGATTATGGTTGAGA+TGG 0.619641 tig0032435:-31220 Msa1449090:CDS
TGGGAGCTTCGATCCAGCGA+TGG 0.620061 tig0032435:-34608 Msa1449090:CDS
GAACGAGAATGGAACAATGT+CGG 0.630243 tig0032435:-34644 Msa1449090:CDS
AAATTTGGATTGTGTTCACG+AGG 0.639341 tig0032435:-34514 Msa1449090:CDS
GCTTCTACATTATCCAAACA+AGG 0.642672 tig0032435:+34475 None:intergenic
TCACTCCGTGACACAGCCGA+GGG 0.649083 tig0032435:-31099 Msa1449090:CDS
AGTTGCAAATGCTGCCACCA+TGG 0.650629 tig0032435:+33634 None:intergenic
ACCTAAGTAGAAGAAAGTGA+AGG 0.651223 tig0032435:+34906 None:intergenic
GCATAACTCCAATCAATCCA+CGG 0.651252 tig0032435:+31840 None:intergenic
AAATAAGTTAGATGGTGCAG+TGG 0.653965 tig0032435:+30821 None:intergenic
GCTTTAGAAGAACAATGGGA+AGG 0.660425 tig0032435:-33320 Msa1449090:intron
ATGGCCCAAAAGCAGAGATG+AGG 0.661245 tig0032435:-34335 Msa1449090:intron
GATAAGTTTAAATTTCCAGG+AGG 0.663790 tig0032435:-34122 Msa1449090:CDS
CGAGAATGGAACAATGTCGG+AGG 0.664613 tig0032435:-34641 Msa1449090:CDS
GCGTGGGGTACCGGCCATGG+TGG 0.665549 tig0032435:-33648 Msa1449090:CDS
CGTCTTGTTGAAGATAAAGG+TGG 0.665573 tig0032435:-34170 Msa1449090:CDS
TCACTTGGGTCACATAGAGG+AGG 0.666578 tig0032435:+32766 None:intergenic
ATCCTTGGGAGCTACAGACA+TGG 0.668744 tig0032435:+33703 None:intergenic
AGAAAGGTGAGAGATTTGAA+CGG 0.670333 tig0032435:-34429 Msa1449090:CDS
GAAACGCAAGTTGAGAAGGA+AGG 0.676993 tig0032435:-34568 Msa1449090:CDS
AAACTTCCAGCAGAGTCGAG+TGG 0.678319 tig0032435:+32870 None:intergenic
ATGGATCGGATACTAAGACC+TGG 0.683061 tig0032435:-31201 Msa1449090:CDS
GCTACGCGCTTGAAACAATG+AGG 0.686117 tig0032435:-31034 Msa1449090:exon
ACGGTCATATATGACAGGCA+AGG 0.687136 tig0032435:+31859 None:intergenic
ACGCGCTTGAAACAATGAGG+TGG 0.704161 tig0032435:-31031 Msa1449090:exon
TTGCCTGTCATATATGACCG+TGG 0.704215 tig0032435:-31857 Msa1449090:CDS
GGTGGTACACAATTTATACA+CGG 0.706977 tig0032435:-34101 Msa1449090:CDS
GATCGGATACTAAGACCTGG+TGG 0.718133 tig0032435:-31198 Msa1449090:CDS
ATAGGATGCTTAGAGCAGGA+GGG 0.719045 tig0032435:-33385 Msa1449090:CDS
AATACCCTATAACTTGCATG+AGG 0.719217 tig0032435:+31075 None:intergenic
TATCATACTCCTGTTAAACG+AGG 0.726957 tig0032435:-35199 Msa1449090:five_prime_UTR
CACTCCGTGACACAGCCGAG+GGG 0.728820 tig0032435:-31098 Msa1449090:CDS
TAGCTGCTATTTAAACCGTG+AGG 0.733432 tig0032435:-32800 Msa1449090:CDS
ATAGCAGGTATTGGACTACG+TGG 0.758509 tig0032435:+30721 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAATAAACATTATAG+GGG + tig0032435:32762-32781 None:intergenic 10.0%
!!! TGAAGTTTTTATTGAAATTA+GGG + tig0032435:31116-31135 None:intergenic 15.0%
!!! TTGAAGTTTTTATTGAAATT+AGG + tig0032435:31117-31136 None:intergenic 15.0%
!!! AGCTATTTTTTTTTTTTTTG+TGG - tig0032435:31675-31694 Msa1449090:CDS 15.0%
!!! GCTATTTTTTTTTTTTTTGT+GGG - tig0032435:31676-31695 Msa1449090:CDS 15.0%
!!! ATTATGCACATTTTTTTTAT+AGG - tig0032435:33213-33232 Msa1449090:intron 15.0%
!!! AATTTTTTATGATACTCAAA+TGG + tig0032435:33269-33288 None:intergenic 15.0%
!! ACTGTTATTATCAAATTTAA+TGG - tig0032435:33528-33547 Msa1449090:intron 15.0%
!!! ATTATTTGCTTTATTTATCT+AGG - tig0032435:33568-33587 Msa1449090:CDS 15.0%
!! AATAAGATTAAGAAATGTTA+TGG - tig0032435:33803-33822 Msa1449090:CDS 15.0%
!! TGTTTATTTATTTATACTAC+TGG - tig0032435:35021-35040 Msa1449090:five_prime_UTR 15.0%
!! GTTTATTTATTTATACTACT+GGG - tig0032435:35022-35041 Msa1449090:five_prime_UTR 15.0%
!! AATTATACAAATAAGTTAGA+TGG + tig0032435:35091-35110 None:intergenic 15.0%
!!! TGATTTCATAGTTTGATTTA+TGG + tig0032435:30911-30930 None:intergenic 20.0%
!!! GAAGTTTTTATTGAAATTAG+GGG + tig0032435:31115-31134 None:intergenic 20.0%
!! AAAGATAAGTTTAAATTTCC+AGG - tig0032435:31776-31795 Msa1449090:intron 20.0%
!! ATAAATTAGATGTCATTGTA+TGG - tig0032435:31996-32015 Msa1449090:intron 20.0%
!! TTCAACAAATTCAATCTAAA+CGG + tig0032435:32625-32644 None:intergenic 20.0%
!! ATTTAACTCTGATTATATCA+TGG + tig0032435:33345-33364 None:intergenic 20.0%
!! ATATAATCAGAGTTAAATGT+AGG - tig0032435:33347-33366 Msa1449090:CDS 20.0%
!!! GAACTAGTTTTACTTTTTTA+GGG + tig0032435:33396-33415 None:intergenic 20.0%
!!! ATTTGATAATAACAGTAAGA+TGG + tig0032435:33524-33543 None:intergenic 20.0%
!!! TCTTTTATGTATCTTGAATA+AGG + tig0032435:34106-34125 None:intergenic 20.0%
!! TATTTCATGATTTATGCTAT+AGG - tig0032435:34187-34206 Msa1449090:CDS 20.0%
!! ATTATCTAAACATAAATAGC+AGG + tig0032435:35198-35217 None:intergenic 20.0%
!! TCATAGTTTGATTTATGGAT+CGG + tig0032435:30906-30925 None:intergenic 25.0%
! AAATTTGCGATCAAGAAATT+TGG - tig0032435:31372-31391 Msa1449090:intron 25.0%
! TGGTAAAAAGTTGAATTGTT+TGG - tig0032435:31509-31528 Msa1449090:intron 25.0%
! TTGCTTTCAATTAAGCTAAA+TGG - tig0032435:31612-31631 Msa1449090:intron 25.0%
! TGCTTTCAATTAAGCTAAAT+GGG - tig0032435:31613-31632 Msa1449090:intron 25.0%
! AGTAAGTAACCTTAGAAATA+TGG + tig0032435:31844-31863 None:intergenic 25.0%
! ATGATTCCTGAAATTACATT+TGG - tig0032435:32095-32114 Msa1449090:CDS 25.0%
! TAAACTGTATAGTGTCAAAT+AGG - tig0032435:32838-32857 Msa1449090:CDS 25.0%
! TTGAACAGTCAATTAGTTAT+TGG - tig0032435:32912-32931 Msa1449090:intron 25.0%
! TGAACAGTCAATTAGTTATT+GGG - tig0032435:32913-32932 Msa1449090:intron 25.0%
!!! TGGAAGTTTTTGAAAAAAGA+TGG - tig0032435:33045-33064 Msa1449090:intron 25.0%
!!! GGAACTAGTTTTACTTTTTT+AGG + tig0032435:33397-33416 None:intergenic 25.0%
!!! TTTATACTTTGAAGCCTATT+AGG + tig0032435:33684-33703 None:intergenic 25.0%
!!! CTTGTTGTTAATATACATCA+GGG - tig0032435:33873-33892 Msa1449090:intron 25.0%
! ATTTATTTATACTACTGGGT+AGG - tig0032435:35026-35045 Msa1449090:five_prime_UTR 25.0%
! TAAACATAAATAGCAGGTAT+TGG + tig0032435:35192-35211 None:intergenic 25.0%
!!! TACCTTTGTGTTCTGTTTTT+TGG + tig0032435:30800-30819 None:intergenic 30.0%
TTGAGAAAATCGACATTGAT+TGG + tig0032435:30934-30953 None:intergenic 30.0%
GAAATTGAAACAGCTTGATT+TGG + tig0032435:31093-31112 None:intergenic 30.0%
! TTTTTCTTGATCGATTAGTG+CGG + tig0032435:31145-31164 None:intergenic 30.0%
! TTCAACTTTTTACCATCTTC+AGG + tig0032435:31504-31523 None:intergenic 30.0%
AATGGGTGTTTCAAATTATG+AGG - tig0032435:31630-31649 Msa1449090:intron 30.0%
!!! TTTTTTTTTTTTGTGGGTGC+AGG - tig0032435:31682-31701 Msa1449090:CDS 30.0%
GATAAGTTTAAATTTCCAGG+AGG - tig0032435:31779-31798 Msa1449090:intron 30.0%
! ATACTTGGACCATATTTCTA+AGG - tig0032435:31832-31851 Msa1449090:intron 30.0%
! TGTCATTGTATGGTGTATTT+TGG - tig0032435:32006-32025 Msa1449090:intron 30.0%
!!! ATTTTGGTTTCACCGTTTTT+TGG - tig0032435:32022-32041 Msa1449090:intron 30.0%
!!! TTTTGGTTTCACCGTTTTTT+GGG - tig0032435:32023-32042 Msa1449090:intron 30.0%
TTCCTGAAATTACATTTGGT+CGG - tig0032435:32099-32118 Msa1449090:CDS 30.0%
ACGTTTATTATATCCTAGTC+AGG - tig0032435:32292-32311 Msa1449090:CDS 30.0%
GTATAATGAGCAATAGTTCT+TGG - tig0032435:32385-32404 Msa1449090:intron 30.0%
TTGTTTACTTGTGATGAAGA+TGG - tig0032435:32473-32492 Msa1449090:intron 30.0%
TGTTTACTTGTGATGAAGAT+GGG - tig0032435:32474-32493 Msa1449090:intron 30.0%
! TATTGCTGCTTGAAGTTAAT+AGG - tig0032435:32498-32517 Msa1449090:intron 30.0%
!! AAGAAGCTTTAGAAGAACAA+TGG - tig0032435:32576-32595 Msa1449090:intron 30.0%
!! AGAAGCTTTAGAAGAACAAT+GGG - tig0032435:32577-32596 Msa1449090:intron 30.0%
!!! TTGTTGAAGCATTTTAGCTA+TGG - tig0032435:32637-32656 Msa1449090:intron 30.0%
GAACAGTCAATTAGTTATTG+GGG - tig0032435:32914-32933 Msa1449090:intron 30.0%
AAATAGCAGCTATTGTCAAA+AGG + tig0032435:33093-33112 None:intergenic 30.0%
AAAATTGACAGACTTGACTA+TGG + tig0032435:33243-33262 None:intergenic 30.0%
!!! GTGTTTTAACATAGCAAGAA+TGG + tig0032435:33374-33393 None:intergenic 30.0%
TTGGCTTCATATTCATTCTT+AGG + tig0032435:33627-33646 None:intergenic 30.0%
! ATCCAGAAAAGAGCTTTTTA+AGG - tig0032435:33719-33738 Msa1449090:CDS 30.0%
TTAAGGCAGAATCAAAATAC+TGG - tig0032435:33736-33755 Msa1449090:CDS 30.0%
CCTGATGTATATTAACAACA+AGG + tig0032435:33875-33894 None:intergenic 30.0%
!! CCTTGTTGTTAATATACATC+AGG - tig0032435:33872-33891 Msa1449090:intron 30.0%
AAACAAATACATGAAATCCC+AGG + tig0032435:34333-34352 None:intergenic 30.0%
TTGTGATGTTGAAAAGAAAC+TGG - tig0032435:34352-34371 Msa1449090:CDS 30.0%
AGTTTGACAGGAATTTATGT+AGG - tig0032435:34400-34419 Msa1449090:CDS 30.0%
GTTTGACAGGAATTTATGTA+GGG - tig0032435:34401-34420 Msa1449090:CDS 30.0%
TAGGGATTAAAAACGAAAGT+TGG - tig0032435:34419-34438 Msa1449090:CDS 30.0%
AGGGATTAAAAACGAAAGTT+GGG - tig0032435:34420-34439 Msa1449090:CDS 30.0%
AGATGCACAAATATGTAGAT+TGG + tig0032435:34514-34533 None:intergenic 30.0%
AAATAAGAAACTTGCAACAC+TGG - tig0032435:34606-34625 Msa1449090:CDS 30.0%
ATACAGTAAACCACATAACA+TGG - tig0032435:34916-34935 Msa1449090:CDS 30.0%
TATCATACTCCTGTTAAACG+AGG - tig0032435:30702-30721 Msa1449090:three_prime_UTR 35.0%
CTCCAAAAAACAGAACACAA+AGG - tig0032435:30795-30814 Msa1449090:three_prime_UTR 35.0%
! TTTGTCACATCTGAGATGAA+TGG + tig0032435:30852-30871 None:intergenic 35.0%
TCCTTCACTTTCTTCTACTT+AGG - tig0032435:30994-31013 Msa1449090:three_prime_UTR 35.0%
ACCTAAGTAGAAGAAAGTGA+AGG + tig0032435:30998-31017 None:intergenic 35.0%
TCTTCTACTTAGGTAAACAC+TGG - tig0032435:31004-31023 Msa1449090:three_prime_UTR 35.0%
GATGAGTTGTTGATATCCAT+CGG + tig0032435:31031-31050 None:intergenic 35.0%
!! GCTTGATTTGGATTGTGATT+GGG + tig0032435:31081-31100 None:intergenic 35.0%
!! AGCTTGATTTGGATTGTGAT+TGG + tig0032435:31082-31101 None:intergenic 35.0%
AAATTTGGATTGTGTTCACG+AGG - tig0032435:31387-31406 Msa1449090:intron 35.0%
GAGTGAGTATATACCTTGTT+TGG - tig0032435:31413-31432 Msa1449090:intron 35.0%
GCTTCTACATTATCCAAACA+AGG + tig0032435:31429-31448 None:intergenic 35.0%
AGAAAGGTGAGAGATTTGAA+CGG - tig0032435:31472-31491 Msa1449090:intron 35.0%
! ACTCGTCTTGTTGAAGATAA+AGG - tig0032435:31728-31747 Msa1449090:intron 35.0%
! TGTCTCTTGAAATCCAGTTT+TGG + tig0032435:31757-31776 None:intergenic 35.0%
AAGTTTAAATTTCCAGGAGG+TGG - tig0032435:31782-31801 Msa1449090:intron 35.0%
GGTGGTACACAATTTATACA+CGG - tig0032435:31800-31819 Msa1449090:intron 35.0%
TGCAACCATGAAATGTAATG+TGG + tig0032435:31919-31938 None:intergenic 35.0%
GCAAGATAGTGAAATGTGAT+TGG - tig0032435:31936-31955 Msa1449090:CDS 35.0%
ACTGATACAGTCCCAAAAAA+CGG + tig0032435:32037-32056 None:intergenic 35.0%
ACTGTATCAGTGTATCTTGT+AGG - tig0032435:32046-32065 Msa1449090:intron 35.0%
TGATTCTCATGAACATCCTT+GGG + tig0032435:32215-32234 None:intergenic 35.0%
GTTCTCGCTGTAGAATTAAT+TGG - tig0032435:32333-32352 Msa1449090:intron 35.0%
AGAATTAATTGGACTCGAGA+TGG - tig0032435:32344-32363 Msa1449090:intron 35.0%
TTCGTGCTTATAAACTGGTT+GGG + tig0032435:32558-32577 None:intergenic 35.0%
AGCAATCAAATTGTTGAGAG+AGG + tig0032435:32709-32728 None:intergenic 35.0%
GTCTTATATGCTATGACTTG+AGG - tig0032435:32805-32824 Msa1449090:CDS 35.0%
!! ACATTGACTCATCATAGAAC+AGG + tig0032435:32972-32991 None:intergenic 35.0%
ATGATGAGTCAATGTAACTC+TGG - tig0032435:32977-32996 Msa1449090:intron 35.0%
TGATGAGTCAATGTAACTCT+GGG - tig0032435:32978-32997 Msa1449090:intron 35.0%
TATAATCGTGACAAGATCTG+AGG + tig0032435:33193-33212 None:intergenic 35.0%
ACTAGTTCCTTTCTTCATTC+TGG - tig0032435:33408-33427 Msa1449090:CDS 35.0%
AGTGTAACCAGAATGAAGAA+AGG + tig0032435:33418-33437 None:intergenic 35.0%
!! TACTTTGAAGCCTATTAGGT+GGG + tig0032435:33680-33699 None:intergenic 35.0%
!! ATACTTTGAAGCCTATTAGG+TGG + tig0032435:33681-33700 None:intergenic 35.0%
! TGCCTTAAAAAGCTCTTTTC+TGG + tig0032435:33724-33743 None:intergenic 35.0%
! ATATATGACCGTGGATTGAT+TGG - tig0032435:34053-34072 Msa1449090:intron 35.0%
CCAACAAAAAAGTAATGCAG+AGG + tig0032435:34157-34176 None:intergenic 35.0%
!!! CCTCTGCATTACTTTTTTGT+TGG - tig0032435:34154-34173 Msa1449090:CDS 35.0%
GAGCTAACAAGTAGAGAAAA+GGG + tig0032435:34293-34312 None:intergenic 35.0%
! ATGCAATGTGTCATCGATTA+TGG - tig0032435:34672-34691 Msa1449090:CDS 35.0%
! AATACCCTATAACTTGCATG+AGG + tig0032435:34829-34848 None:intergenic 35.0%
TCATGCAAGTTATAGGGTAT+TGG - tig0032435:34828-34847 Msa1449090:CDS 35.0%
! GACTAATTTGCCATGTTATG+TGG + tig0032435:34929-34948 None:intergenic 35.0%
AAATAAGTTAGATGGTGCAG+TGG + tig0032435:35083-35102 None:intergenic 35.0%
ACTCAGTTTCCTCGTTTAAC+AGG + tig0032435:30714-30733 None:intergenic 40.0%
! ATCTGAGATGAATGGAGAAG+AGG + tig0032435:30844-30863 None:intergenic 40.0%
TTTGGATTGTGATTGGGATC+CGG + tig0032435:31075-31094 None:intergenic 40.0%
GAACGAGAATGGAACAATGT+CGG - tig0032435:31257-31276 Msa1449090:intron 40.0%
! TAACGAAACGCAAGTTGAGA+AGG - tig0032435:31329-31348 Msa1449090:intron 40.0%
ATTGGAGCACGATAACCTTT+AGG + tig0032435:31543-31562 None:intergenic 40.0%
!! TTGACCTCATCTCTGCTTTT+GGG + tig0032435:31573-31592 None:intergenic 40.0%
! TTTGACCTCATCTCTGCTTT+TGG + tig0032435:31574-31593 None:intergenic 40.0%
!!! TTTTTTTGTGGGTGCAGGTA+TGG - tig0032435:31687-31706 Msa1449090:CDS 40.0%
TCTTCAACAAGACGAGTATG+AGG + tig0032435:31725-31744 None:intergenic 40.0%
! CGTCTTGTTGAAGATAAAGG+TGG - tig0032435:31731-31750 Msa1449090:intron 40.0%
AAGATAAAGGTGGCCAAAAC+TGG - tig0032435:31741-31760 Msa1449090:intron 40.0%
ATAAATTGTGTACCACCTCC+TGG + tig0032435:31797-31816 None:intergenic 40.0%
TGCCGACCAAATGTAATTTC+AGG + tig0032435:32104-32123 None:intergenic 40.0%
ATACGAGTTGCTCTTGATGT+TGG - tig0032435:32125-32144 Msa1449090:CDS 40.0%
CTGATTCTCATGAACATCCT+TGG + tig0032435:32216-32235 None:intergenic 40.0%
ATCAAGTCAAAAGCCTGACT+AGG + tig0032435:32308-32327 None:intergenic 40.0%
GTTAATAGGATGCTTAGAGC+AGG - tig0032435:32512-32531 Msa1449090:intron 40.0%
!!! AGCAGGAGGGTATTTTGTTT+GGG - tig0032435:32529-32548 Msa1449090:intron 40.0%
CTTCGTGCTTATAAACTGGT+TGG + tig0032435:32559-32578 None:intergenic 40.0%
GCTTCTTCGTGCTTATAAAC+TGG + tig0032435:32563-32582 None:intergenic 40.0%
!! GCTTTAGAAGAACAATGGGA+AGG - tig0032435:32581-32600 Msa1449090:intron 40.0%
CAAATTGTTGAGAGAGGTCT+AGG + tig0032435:32703-32722 None:intergenic 40.0%
CAGTTCGAGAAAAGTAGGAA+AGG + tig0032435:32890-32909 None:intergenic 40.0%
CAAGTCAGTTCGAGAAAAGT+AGG + tig0032435:32895-32914 None:intergenic 40.0%
AAGATGGCTACATTGCAGTA+TGG - tig0032435:33061-33080 Msa1449090:intron 40.0%
! TAGCTGCTATTTAAACCGTG+AGG - tig0032435:33101-33120 Msa1449090:intron 40.0%
AACAATACCAAACGCTGTCA+GGG + tig0032435:33164-33183 None:intergenic 40.0%
AAACAATACCAAACGCTGTC+AGG + tig0032435:33165-33184 None:intergenic 40.0%
ATGAAGCCAACATTACCGAT+TGG - tig0032435:33637-33656 Msa1449090:CDS 40.0%
!! ACTTTGAAGCCTATTAGGTG+GGG + tig0032435:33679-33698 None:intergenic 40.0%
TTAAGCAGAAACTTGACAGC+TGG - tig0032435:33985-34004 Msa1449090:intron 40.0%
TAAGCAGAAACTTGACAGCT+GGG - tig0032435:33986-34005 Msa1449090:intron 40.0%
ATGAATGTTGTTCCTGTCAG+TGG - tig0032435:34011-34030 Msa1449090:intron 40.0%
! TATATGACAGGCAAGGTGTT+TGG + tig0032435:34038-34057 None:intergenic 40.0%
AATCCACGGTCATATATGAC+AGG + tig0032435:34050-34069 None:intergenic 40.0%
GCATAACTCCAATCAATCCA+CGG + tig0032435:34064-34083 None:intergenic 40.0%
TGATTGGAGTTATGCATGAC+TGG - tig0032435:34069-34088 Msa1449090:intron 40.0%
AGACACTAGTGTTCTCAATG+TGG - tig0032435:34123-34142 Msa1449090:CDS 40.0%
GAAATCATAGGTTCTCGGAT+AGG + tig0032435:34229-34248 None:intergenic 40.0%
TGCAGGAAATCATAGGTTCT+CGG + tig0032435:34234-34253 None:intergenic 40.0%
GGAGCTAACAAGTAGAGAAA+AGG + tig0032435:34294-34313 None:intergenic 40.0%
CATTATCTCCTTAACTGCCT+GGG - tig0032435:34313-34332 Msa1449090:intron 40.0%
GTTGAAAAGAAACTGGTTGC+TGG - tig0032435:34359-34378 Msa1449090:CDS 40.0%
ACTGGTTGCTGGAAATATGT+AGG - tig0032435:34370-34389 Msa1449090:CDS 40.0%
CTGGTTGCTGGAAATATGTA+GGG - tig0032435:34371-34390 Msa1449090:CDS 40.0%
TGGTTGCTGGAAATATGTAG+GGG - tig0032435:34372-34391 Msa1449090:CDS 40.0%
! GTCATCGATTATGGTTGAGA+TGG - tig0032435:34681-34700 Msa1449090:CDS 40.0%
CGATTATGGTTGAGATGGAT+CGG - tig0032435:34686-34705 Msa1449090:CDS 40.0%
CCATTATGGCAAGAGAATCA+CGG + tig0032435:34741-34760 None:intergenic 40.0%
CTCTTGAAGCTCATCCATTA+TGG + tig0032435:34755-34774 None:intergenic 40.0%
CAAGAGATTGCCAAAGCAAT+AGG - tig0032435:34769-34788 Msa1449090:CDS 40.0%
AAGTATCACTTCCTCACAAG+AGG - tig0032435:34987-35006 Msa1449090:exon 40.0%
!! AGCAACGATTTTGAGAGCGT+TGG + tig0032435:30962-30981 None:intergenic 45.0%
TTAGGTAAACACTGGTCCGA+TGG - tig0032435:31012-31031 Msa1449090:three_prime_UTR 45.0%
TTGGATTGTGATTGGGATCC+GGG + tig0032435:31074-31093 None:intergenic 45.0%
CTTGATCGATTAGTGCGGAA+AGG + tig0032435:31140-31159 None:intergenic 45.0%
! ATGTCGGAGGAGTTTGAGAT+TGG - tig0032435:31273-31292 Msa1449090:intron 45.0%
! TGTCGGAGGAGTTTGAGATT+GGG - tig0032435:31274-31293 Msa1449090:intron 45.0%
! GAAACGCAAGTTGAGAAGGA+AGG - tig0032435:31333-31352 Msa1449090:intron 45.0%
GATTAAGAAGTTGCCGTCGA+CGG - tig0032435:31449-31468 Msa1449090:intron 45.0%
! TGTTTGGTTCCTGCTCCTAA+AGG - tig0032435:31525-31544 Msa1449090:intron 45.0%
GTTATCGTGCTCCAATTCCA+TGG - tig0032435:31547-31566 Msa1449090:intron 45.0%
CGACGCCACATTACATTTCA+TGG - tig0032435:31911-31930 Msa1449090:CDS 45.0%
! GTTGCTCTTGATGTTGGTTG+TGG - tig0032435:32131-32150 Msa1449090:CDS 45.0%
!!! GGTTGTGGTGTTGCTAGTTT+TGG - tig0032435:32146-32165 Msa1449090:CDS 45.0%
TTGGTGCGTACTTACTGCAA+CGG - tig0032435:32165-32184 Msa1449090:CDS 45.0%
! ATTCAGTTTGCTCTTGAGCG+TGG - tig0032435:32236-32255 Msa1449090:CDS 45.0%
! TTCAGTTTGCTCTTGAGCGT+GGG - tig0032435:32237-32256 Msa1449090:CDS 45.0%
AATAGGATGCTTAGAGCAGG+AGG - tig0032435:32515-32534 Msa1449090:intron 45.0%
ATAGGATGCTTAGAGCAGGA+GGG - tig0032435:32516-32535 Msa1449090:intron 45.0%
!!! GAGCAGGAGGGTATTTTGTT+TGG - tig0032435:32528-32547 Msa1449090:intron 45.0%
! TGCTATTTAAACCGTGAGGC+AGG - tig0032435:33105-33124 Msa1449090:intron 45.0%
TCATCACTTGGGTCACATAG+AGG + tig0032435:33141-33160 None:intergenic 45.0%
GTTTGCAAACCCCACCTAAT+AGG - tig0032435:33667-33686 Msa1449090:CDS 45.0%
CTTATGTTCGTGCTTTGCAC+TGG - tig0032435:33775-33794 Msa1449090:CDS 45.0%
AATGTTATGGACATGCGAGC+AGG - tig0032435:33816-33835 Msa1449090:intron 45.0%
ACGGTCATATATGACAGGCA+AGG + tig0032435:34045-34064 None:intergenic 45.0%
TTGCCTGTCATATATGACCG+TGG - tig0032435:34044-34063 Msa1449090:intron 45.0%
GTTCTCGGATAGGTGTCAAA+TGG + tig0032435:34219-34238 None:intergenic 45.0%
TGCTGCATGCAGGAAATCAT+AGG + tig0032435:34241-34260 None:intergenic 45.0%
! TTTTCCTCTCAACAGAGAGC+AGG + tig0032435:34266-34285 None:intergenic 45.0%
TGCTCTCTGTTGAGAGGAAA+AGG - tig0032435:34265-34284 Msa1449090:intron 45.0%
CCAGGCAGTTAAGGAGATAA+TGG + tig0032435:34315-34334 None:intergenic 45.0%
CCATTATCTCCTTAACTGCC+TGG - tig0032435:34312-34331 Msa1449090:intron 45.0%
CATGAAATCCCAGGCAGTTA+AGG + tig0032435:34324-34343 None:intergenic 45.0%
GTAGGGGACAATAGTTTGAC+AGG - tig0032435:34388-34407 Msa1449090:CDS 45.0%
ATGGATCGGATACTAAGACC+TGG - tig0032435:34700-34719 Msa1449090:CDS 45.0%
CCGTGATTCTCTTGCCATAA+TGG - tig0032435:34738-34757 Msa1449090:CDS 45.0%
AGATTGCCAAAGCAATAGGC+TGG - tig0032435:34773-34792 Msa1449090:CDS 45.0%
ATTGTTCACTGCCTCTTGTG+AGG + tig0032435:35001-35020 None:intergenic 45.0%
!! ATAGCAGGTATTGGACTACG+TGG + tig0032435:35183-35202 None:intergenic 45.0%
!! TATTATAAATAAACATTATA+GGG + tig0032435:32763-32782 None:intergenic 5.0%
!! TTATTATAAATAAACATTAT+AGG + tig0032435:32764-32783 None:intergenic 5.0%
ATTGTGATTGGGATCCGGGT+CGG + tig0032435:31070-31089 None:intergenic 50.0%
AATTTCTCCACCGAATCCGC+CGG + tig0032435:31228-31247 None:intergenic 50.0%
!! GCGGATTCGGTGGAGAAATT+CGG - tig0032435:31228-31247 Msa1449090:CDS 50.0%
!! CGGATTCGGTGGAGAAATTC+GGG - tig0032435:31229-31248 Msa1449090:CDS 50.0%
TTCGGGATCGTGAACGAGAA+TGG - tig0032435:31246-31265 Msa1449090:intron 50.0%
CGAGAATGGAACAATGTCGG+AGG - tig0032435:31260-31279 Msa1449090:intron 50.0%
!! ATCCAGCGATGGTGGATGAT+TGG - tig0032435:31304-31323 Msa1449090:intron 50.0%
!! TCCAGCGATGGTGGATGATT+GGG - tig0032435:31305-31324 Msa1449090:intron 50.0%
GAACGGCATTGTCCTGAAGA+TGG - tig0032435:31489-31508 Msa1449090:intron 50.0%
! GCACGATAACCTTTAGGAGC+AGG + tig0032435:31537-31556 None:intergenic 50.0%
!! CTGCTTTTGGGCCATGGAAT+TGG + tig0032435:31561-31580 None:intergenic 50.0%
!! TCATCTCTGCTTTTGGGCCA+TGG + tig0032435:31567-31586 None:intergenic 50.0%
ATGGCCCAAAAGCAGAGATG+AGG - tig0032435:31566-31585 Msa1449090:intron 50.0%
ACACGGCGCAGATGAATACT+TGG - tig0032435:31817-31836 Msa1449090:intron 50.0%
ATCCTTGGGAGCTACAGACA+TGG + tig0032435:32201-32220 None:intergenic 50.0%
! TCAGTTTGCTCTTGAGCGTG+GGG - tig0032435:32238-32257 Msa1449090:CDS 50.0%
AGTTGCAAATGCTGCCACCA+TGG + tig0032435:32270-32289 None:intergenic 50.0%
ATCTTACCACTCGACTCTGC+TGG - tig0032435:33025-33044 Msa1449090:intron 50.0%
AAACTTCCAGCAGAGTCGAG+TGG + tig0032435:33034-33053 None:intergenic 50.0%
! GAGGTTTAGTTCCTGCCTCA+CGG + tig0032435:33119-33138 None:intergenic 50.0%
TCACTTGGGTCACATAGAGG+AGG + tig0032435:33138-33157 None:intergenic 50.0%
! ATGGACATGCGAGCAGGTTT+TGG - tig0032435:33822-33841 Msa1449090:intron 50.0%
!!! ACATGCGAGCAGGTTTTGGA+GGG - tig0032435:33826-33845 Msa1449090:intron 50.0%
! AAGGTGTTTGGACCACTGAC+AGG + tig0032435:34026-34045 None:intergenic 50.0%
CATACCTGCTCTCTGTTGAG+AGG - tig0032435:34259-34278 Msa1449090:intron 50.0%
GATCGGATACTAAGACCTGG+TGG - tig0032435:34703-34722 Msa1449090:CDS 50.0%
! ATAACTTGCATGAGGCCCCT+CGG + tig0032435:34821-34840 None:intergenic 50.0%
AGGGGCCTCATGCAAGTTAT+AGG - tig0032435:34821-34840 Msa1449090:CDS 50.0%
GGGGCCTCATGCAAGTTATA+GGG - tig0032435:34822-34841 Msa1449090:CDS 50.0%
GCTACGCGCTTGAAACAATG+AGG - tig0032435:34867-34886 Msa1449090:CDS 50.0%
ACGCGCTTGAAACAATGAGG+TGG - tig0032435:34870-34889 Msa1449090:CDS 50.0%
GACGTATGCAGCAGCTGTTT+GGG + tig0032435:35061-35080 None:intergenic 50.0%
CTTCACCCAAAACTCCGACC+CGG - tig0032435:31053-31072 Msa1449090:CDS 55.0%
CGGTGGAGGAGGTTGTGTTA+GGG + tig0032435:31169-31188 None:intergenic 55.0%
ACGGTGGAGGAGGTTGTGTT+AGG + tig0032435:31170-31189 None:intergenic 55.0%
ACCCAATCATCCACCATCGC+TGG + tig0032435:31309-31328 None:intergenic 55.0%
AAGTTGCCGTCGACGGAGAA+AGG - tig0032435:31456-31475 Msa1449090:intron 55.0%
CTCTCACCTTTCTCCGTCGA+CGG + tig0032435:31465-31484 None:intergenic 55.0%
CACCATGTCTGTAGCTCCCA+AGG - tig0032435:32196-32215 Msa1449090:CDS 55.0%
CGCTGTCAGGGTCATCACTT+GGG + tig0032435:33152-33171 None:intergenic 55.0%
ACGCTGTCAGGGTCATCACT+TGG + tig0032435:33153-33172 None:intergenic 55.0%
GTGATGACCCTGACAGCGTT+TGG - tig0032435:33154-33173 Msa1449090:intron 55.0%
CGCAGGCCAATCGGTAATGT+TGG + tig0032435:33646-33665 None:intergenic 55.0%
TTGCAAACGCGCAGGCCAAT+CGG + tig0032435:33655-33674 None:intergenic 55.0%
!! GACATGCGAGCAGGTTTTGG+AGG - tig0032435:33825-33844 Msa1449090:intron 55.0%
AGAGCAGGTATGCTGCATGC+AGG + tig0032435:34251-34270 None:intergenic 55.0%
CGGATGTATACACGTCCACC+AGG + tig0032435:34721-34740 None:intergenic 55.0%
TGCGTGCCAGCCTATTGCTT+TGG + tig0032435:34782-34801 None:intergenic 55.0%
GGACGTATGCAGCAGCTGTT+TGG + tig0032435:35062-35081 None:intergenic 55.0%
! GGGATCCGGGTCGGAGTTTT+GGG + tig0032435:31061-31080 None:intergenic 60.0%
! TGGGATCCGGGTCGGAGTTT+TGG + tig0032435:31062-31081 None:intergenic 60.0%
TGGGAGCTTCGATCCAGCGA+TGG - tig0032435:31293-31312 Msa1449090:intron 60.0%
GAGCTTCGATCCAGCGATGG+TGG - tig0032435:31296-31315 Msa1449090:intron 60.0%
TGCTCTTGAGCGTGGGGTAC+CGG - tig0032435:32244-32263 Msa1449090:CDS 60.0%
GCAAATGCTGCCACCATGGC+CGG + tig0032435:32266-32285 None:intergenic 60.0%
ATCACTCCGTGACACAGCCG+AGG - tig0032435:34801-34820 Msa1449090:CDS 60.0%
TCACTCCGTGACACAGCCGA+GGG - tig0032435:34802-34821 Msa1449090:CDS 60.0%
TTCTCCACCGAATCCGCCGG+CGG + tig0032435:31225-31244 None:intergenic 65.0%
GGTGGGGTTTGCAAACGCGC+AGG + tig0032435:33663-33682 None:intergenic 65.0%
CACTCCGTGACACAGCCGAG+GGG - tig0032435:34803-34822 Msa1449090:CDS 65.0%
!! GGTGACGGTGGTGGCGGTGA+CGG + tig0032435:31189-31208 None:intergenic 70.0%
!! GGTGGTGGTGACGGTGGTGG+CGG + tig0032435:31195-31214 None:intergenic 70.0%
!! GGTGGTGGTGGTGACGGTGG+TGG + tig0032435:31198-31217 None:intergenic 70.0%
!! GGTGGCGGTGGTGGTGGTGA+CGG + tig0032435:31204-31223 None:intergenic 70.0%
!! TGAGCGTGGGGTACCGGCCA+TGG - tig0032435:32250-32269 Msa1449090:CDS 70.0%
GAGGCCCCTCGGCTGTGTCA+CGG + tig0032435:34810-34829 None:intergenic 70.0%
! GGTGGCGGTGACGGTGGAGG+AGG + tig0032435:31180-31199 None:intergenic 75.0%
!! GGTGGTGGCGGTGACGGTGG+AGG + tig0032435:31183-31202 None:intergenic 75.0%
!! GACGGTGGTGGCGGTGACGG+TGG + tig0032435:31186-31205 None:intergenic 75.0%
!! GGCGGTGGTGGTGGTGACGG+TGG + tig0032435:31201-31220 None:intergenic 75.0%
ACCACCACCACCGCCACCGC+CGG - tig0032435:31206-31225 Msa1449090:CDS 75.0%
! ACCGCCACCGCCGGCGGATT+CGG - tig0032435:31215-31234 Msa1449090:CDS 75.0%
ACCGAATCCGCCGGCGGTGG+CGG + tig0032435:31219-31238 None:intergenic 75.0%
TCCACCGAATCCGCCGGCGG+TGG + tig0032435:31222-31241 None:intergenic 75.0%
!! GCGTGGGGTACCGGCCATGG+TGG - tig0032435:32253-32272 Msa1449090:CDS 75.0%
! ACCACCACCGCCACCGCCGG+CGG - tig0032435:31209-31228 Msa1449090:CDS 80.0%
!! GAATCCGCCGGCGGTGGCGG+TGG + tig0032435:31216-31235 None:intergenic 80.0%
!! GCCACCGCCGGCGGATTCGG+TGG - tig0032435:31218-31237 Msa1449090:CDS 80.0%
!! GCCGGCGGTGGCGGTGGTGG+TGG + tig0032435:31210-31229 None:intergenic 85.0%
!! TCCGCCGGCGGTGGCGGTGG+TGG + tig0032435:31213-31232 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
tig0032435 gene 30672 35251 30672 ID=Msa1449090;Name=Msa1449090
tig0032435 mRNA 30672 35251 30672 ID=Msa1449090-mRNA-1;Parent=Msa1449090;Name=Msa1449090-mRNA-1;_AED=0.10;_eAED=0.10;_QI=250|1|1|1|1|1|9|372|674
tig0032435 exon 30672 31251 30672 ID=Msa1449090-mRNA-1:exon:16777;Parent=Msa1449090-mRNA-1
tig0032435 exon 31637 31714 31637 ID=Msa1449090-mRNA-1:exon:16776;Parent=Msa1449090-mRNA-1
tig0032435 exon 31833 31955 31833 ID=Msa1449090-mRNA-1:exon:16775;Parent=Msa1449090-mRNA-1
tig0032435 exon 32076 32333 32076 ID=Msa1449090-mRNA-1:exon:16774;Parent=Msa1449090-mRNA-1
tig0032435 exon 32748 32907 32748 ID=Msa1449090-mRNA-1:exon:16773;Parent=Msa1449090-mRNA-1
tig0032435 exon 33321 33431 33321 ID=Msa1449090-mRNA-1:exon:16772;Parent=Msa1449090-mRNA-1
tig0032435 exon 33558 33828 33558 ID=Msa1449090-mRNA-1:exon:16771;Parent=Msa1449090-mRNA-1
tig0032435 exon 34070 34219 34070 ID=Msa1449090-mRNA-1:exon:16770;Parent=Msa1449090-mRNA-1
tig0032435 exon 34336 35251 34336 ID=Msa1449090-mRNA-1:exon:16769;Parent=Msa1449090-mRNA-1
tig0032435 five_prime_UTR 35002 35251 35002 ID=Msa1449090-mRNA-1:five_prime_utr;Parent=Msa1449090-mRNA-1
tig0032435 CDS 34336 35001 34336 ID=Msa1449090-mRNA-1:cds;Parent=Msa1449090-mRNA-1
tig0032435 CDS 34070 34219 34070 ID=Msa1449090-mRNA-1:cds;Parent=Msa1449090-mRNA-1
tig0032435 CDS 33558 33828 33558 ID=Msa1449090-mRNA-1:cds;Parent=Msa1449090-mRNA-1
tig0032435 CDS 33321 33431 33321 ID=Msa1449090-mRNA-1:cds;Parent=Msa1449090-mRNA-1
tig0032435 CDS 32748 32907 32748 ID=Msa1449090-mRNA-1:cds;Parent=Msa1449090-mRNA-1
tig0032435 CDS 32076 32333 32076 ID=Msa1449090-mRNA-1:cds;Parent=Msa1449090-mRNA-1
tig0032435 CDS 31833 31955 31833 ID=Msa1449090-mRNA-1:cds;Parent=Msa1449090-mRNA-1
tig0032435 CDS 31637 31714 31637 ID=Msa1449090-mRNA-1:cds;Parent=Msa1449090-mRNA-1
tig0032435 CDS 31044 31251 31044 ID=Msa1449090-mRNA-1:cds;Parent=Msa1449090-mRNA-1
tig0032435 three_prime_UTR 30672 31043 30672 ID=Msa1449090-mRNA-1:three_prime_utr;Parent=Msa1449090-mRNA-1
Gene Sequence

>Msa1449090

ATGAAATCACCAATCAATGTCGATTTTCTCAAAACAACCAACGCTCTCAAAATCGTTGCTTTCTTCTTCATTTCCTTCACTTTCTTCTACTTAGGTAAACACTGGTCCGATGGATATCAACAACTCATCTTCTTCACCCAAAACTCCGACCCGGATCCCAATCACAATCCAAATCAAGCTGTTTCAATTTCCCCTAATTTCAATAAAAACTTCAACCTTTCCGCACTAATCGATCAAGAAAAAACCCTAACACAACCTCCTCCACCGTCACCGCCACCACCGTCACCACCACCACCGCCACCGCCGGCGGATTCGGTGGAGAAATTCGGGATCGTGAACGAGAATGGAACAATGTCGGAGGAGTTTGAGATTGGGAGCTTCGATCCAGCGATGGTGGATGATTGGGTTAACGAAACGCAAGTTGAGAAGGAAGGTTCTGAGAGTGTTACGAAATTTGCGATCAAGAAATTTGGATTGTGTTCACGAGGTATGAGTGAGTATATACCTTGTTTGGATAATGTAGAAGCGATTAAGAAGTTGCCGTCGACGGAGAAAGGTGAGAGATTTGAACGGCATTGTCCTGAAGATGGTAAAAAGTTGAATTGTTTGGTTCCTGCTCCTAAAGGTTATCGTGCTCCAATTCCATGGCCCAAAAGCAGAGATGAGGTATGGTTCAGTAATGTTCCTCATACTCGTCTTGTTGAAGATAAAGGTGGCCAAAACTGGATTTCAAGAGACAAAGATAAGTTTAAATTTCCAGGAGGTGGTACACAATTTATACACGGCGCAGATGAATACTTGGACCATATTTCTAAGATGATTCCTGAAATTACATTTGGTCGGCATATACGAGTTGCTCTTGATGTTGGTTGTGGTGTTGCTAGTTTTGGTGCGTACTTACTGCAACGGAATGTCGTCACCATGTCTGTAGCTCCCAAGGATGTTCATGAGAATCAGATTCAGTTTGCTCTTGAGCGTGGGGTACCGGCCATGGTGGCAGCATTTGCAACTAGACGTTTATTATATCCTAGTCAGGCTTTTGACTTGATACACTGTTCTCGCTGTAGAATTAATTGGACTCGAGATGATGGGATATTGCTGCTTGAAGTTAATAGGATGCTTAGAGCAGGAGGGTATTTTGTTTGGGCTGCCCAACCAGTTTATAAGCACGAAGAAGCTTTAGAAGAACAATGGGAAGAGATGCTTAATCTTACCACTCGACTCTGCTGGAAGTTTTTGAAAAAAGATGGCTACATTGCAGTATGGCAGAAACCTTTTGACAATAGCTGCTATTTAAACCGTGAGGCAGGAACTAAACCTCCTCTATGTGACCCAAGTGATGACCCTGACAGCGTTTGGTATGTTGATCTAAAAGCATGCATCTCTGAATTGCCTAAGAATGAATATGAAGCCAACATTACCGATTGGCCTGCGCGTTTGCAAACCCCACCTAATAGGCTTCAAAGTATAAAAGTTGATGCTTTCATATCCAGAAAAGAGCTTTTTAAGGCAGAATCAAAATACTGGAATGAGATAATAGAAGCTTATGTTCGTGCTTTGCACTGGAAGAAAATAAGATTAAGAAATGTTATGGACATGCGAGCAGGTTTTGGAGGATTTGCAGCAGCATTGATTAAGCAGAAACTTGACAGCTGGGTTATGAATGTTGTTCCTGTCAGTGGTCCAAACACCTTGCCTGTCATATATGACCGTGGATTGATTGGAGTTATGCATGACTGGTGTGAACCATTTGACACCTATCCGAGAACCTATGATTTCCTGCATGCAGCATACCTGCTCTCTGTTGAGAGGAAAAGATGCAATGTGTCATCGATTATGGTTGAGATGGATCGGATACTAAGACCTGGTGGACGTGTATACATCCGTGATTCTCTTGCCATAATGGATGAGCTTCAAGAGATTGCCAAAGCAATAGGCTGGCACGCATCACTCCGTGACACAGCCGAGGGGCCTCATGCAAGTTATAGGGTATTGGTTTGTGATAAGCATCTGCTACGCGCTTGA
Protein sequence

>Msa1449090

MKSPINVDFLKTTNALKIVAFFFISFTFFYLGKHWSDGYQQLIFFTQNSDPDPNHNPNQAVSISPNFNKNFNLSALIDQEKTLTQPPPPSPPPPSPPPPPPPADSVEKFGIVNENGTMSEEFEIGSFDPAMVDDWVNETQVEKEGSESVTKFAIKKFGLCSRGMSEYIPCLDNVEAIKKLPSTEKGERFERHCPEDGKKLNCLVPAPKGYRAPIPWPKSRDEVWFSNVPHTRLVEDKGGQNWISRDKDKFKFPGGGTQFIHGADEYLDHISKMIPEITFGRHIRVALDVGCGVASFGAYLLQRNVVTMSVAPKDVHENQIQFALERGVPAMVAAFATRRLLYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEALEEQWEEMLNLTTRLCWKFLKKDGYIAVWQKPFDNSCYLNREAGTKPPLCDPSDDPDSVWYVDLKACISELPKNEYEANITDWPARLQTPPNRLQSIKVDAFISRKELFKAESKYWNEIIEAYVRALHWKKIRLRNVMDMRAGFGGFAAALIKQKLDSWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDFLHAAYLLSVERKRCNVSSIMVEMDRILRPGGRVYIRDSLAIMDELQEIAKAIGWHASLRDTAEGPHASYRVLVCDKHLLRA*