AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0689960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0689960 MtrunA17_Chr3g0112341 97.774 674 11 1 1 674 1 670 0.0 1377
Msa0689960 MtrunA17_Chr5g0435751 73.323 656 124 6 16 669 11 617 0.0 997
Msa0689960 MtrunA17_Chr1g0159741 66.381 583 181 5 98 671 82 658 0.0 832
Msa0689960 MtrunA17_Chr3g0125511 49.109 505 242 7 165 657 232 733 9.84e-175 516
Msa0689960 MtrunA17_Chr3g0130381 45.652 552 273 11 111 651 224 759 1.80e-169 504
Msa0689960 MtrunA17_Chr8g0384431 44.704 557 279 11 111 654 252 792 8.84e-168 501
Msa0689960 MtrunA17_Chr1g0187601 47.937 509 242 9 155 649 89 588 7.23e-167 492
Msa0689960 MtrunA17_Chr1g0183721 48.337 511 243 9 159 656 64 566 1.79e-166 490
Msa0689960 MtrunA17_Chr1g0167381 44.933 523 269 7 137 647 72 587 2.43e-164 486
Msa0689960 MtrunA17_Chr8g0372471 47.544 509 245 11 156 652 376 874 1.06e-162 490
Msa0689960 MtrunA17_Chr5g0437501 43.986 557 270 12 113 652 62 593 2.22e-162 480
Msa0689960 MtrunA17_Chr3g0113981 47.000 500 245 11 159 650 167 654 3.66e-160 476
Msa0689960 MtrunA17_Chr7g0246701 44.000 550 274 14 144 674 93 627 1.30e-152 456
Msa0689960 MtrunA17_Chr8g0350391 43.820 534 272 12 160 674 108 632 5.01e-152 454
Msa0689960 MtrunA17_Chr8g0361791 44.841 533 261 12 155 670 82 598 6.08e-151 451
Msa0689960 MtrunA17_Chr6g0472571 42.694 527 274 11 160 669 108 623 2.34e-150 450
Msa0689960 MtrunA17_Chr8g0388881 41.744 539 289 10 147 669 88 617 2.61e-149 447
Msa0689960 MtrunA17_Chr8g0369481 43.478 529 274 10 157 671 70 587 2.00e-148 444
Msa0689960 MtrunA17_Chr1g0203741 42.266 556 281 15 140 669 73 614 3.80e-147 442
Msa0689960 MtrunA17_Chr7g0214551 43.238 525 274 12 154 661 40 557 1.46e-145 435
Msa0689960 MtrunA17_Chr5g0416991 43.715 533 266 11 155 670 82 597 2.22e-145 436
Msa0689960 MtrunA17_Chr4g0055031 42.750 531 276 11 155 670 84 601 3.48e-145 436
Msa0689960 MtrunA17_Chr5g0409411 43.993 541 276 11 147 671 60 589 3.88e-144 432
Msa0689960 MtrunA17_Chr3g0092501 42.218 559 287 15 128 669 55 594 8.70e-144 432
Msa0689960 MtrunA17_Chr8g0350351 42.912 522 271 12 160 669 91 597 1.93e-141 426
Msa0689960 MtrunA17_Chr1g0171781 43.609 532 280 8 150 669 77 600 6.20e-141 425
Msa0689960 MtrunA17_Chr7g0246681 42.830 530 274 12 155 671 73 586 2.24e-140 422
Msa0689960 MtrunA17_Chr1g0155141 40.472 509 266 14 156 651 198 682 6.59e-123 381
Msa0689960 MtrunA17_Chr3g0115931 35.390 551 323 13 145 669 142 685 1.22e-111 352
Msa0689960 MtrunA17_Chr5g0426281 34.508 539 314 12 155 669 144 667 7.55e-108 341
Msa0689960 MtrunA17_Chr5g0404771 50.519 289 138 3 130 415 290 576 2.81e-94 303
Msa0689960 MtrunA17_Chr5g0404761 39.179 268 147 7 401 657 1 263 6.95e-61 205
Msa0689960 MtrunA17_Chr4g0043121 34.796 319 192 8 155 462 84 397 5.10e-56 196
Msa0689960 MtrunA17_Chr4g0043131 48.649 148 73 2 527 673 39 184 1.07e-41 149
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0689960 AT2G39750.1 69.231 702 180 5 1 674 1 694 0.0 1019
Msa0689960 AT5G06050.1 67.994 678 195 6 1 671 1 663 0.0 979
Msa0689960 AT1G77260.1 63.839 672 220 5 3 671 4 655 0.0 918
Msa0689960 AT3G51070.1 49.307 505 239 9 159 651 373 872 3.17e-172 515
Msa0689960 AT5G64030.1 45.966 533 271 9 136 656 277 804 1.31e-170 509
Msa0689960 AT2G34300.2 47.556 532 261 8 138 656 219 745 4.07e-170 506
Msa0689960 AT2G34300.3 47.556 532 261 8 138 656 219 745 4.07e-170 506
Msa0689960 AT2G34300.1 47.556 532 261 8 138 656 219 745 4.07e-170 506
Msa0689960 AT1G29470.1 46.415 530 268 8 139 657 222 746 6.86e-169 503
Msa0689960 AT1G29470.2 46.415 530 268 8 139 657 222 746 6.86e-169 503
Msa0689960 AT2G40280.1 48.509 503 239 10 156 651 79 568 6.89e-169 496
Msa0689960 AT4G14360.1 47.244 508 249 8 152 647 71 571 1.35e-167 493
Msa0689960 AT4G14360.2 47.244 508 249 8 152 647 71 571 1.35e-167 493
Msa0689960 AT3G23300.2 47.093 516 254 8 152 655 74 582 1.63e-167 493
Msa0689960 AT3G23300.1 47.093 516 254 8 152 655 74 582 1.63e-167 493
Msa0689960 AT3G56080.1 47.984 496 234 9 166 651 114 595 2.61e-164 485
Msa0689960 AT1G04430.1 44.527 539 280 7 123 649 50 581 4.08e-161 478
Msa0689960 AT1G04430.3 44.527 539 280 7 123 649 50 581 4.08e-161 478
Msa0689960 AT1G04430.2 44.527 539 280 7 123 649 50 581 4.08e-161 478
Msa0689960 AT3G51070.2 50.435 460 211 9 159 606 373 827 3.39e-156 472
Msa0689960 AT4G10440.1 42.831 551 261 12 150 669 86 613 3.21e-152 455
Msa0689960 AT1G33170.1 42.857 546 271 12 149 669 102 631 4.79e-152 455
Msa0689960 AT5G14430.1 45.287 541 272 11 148 671 70 603 4.48e-151 451
Msa0689960 AT2G45750.1 43.407 546 273 11 149 670 80 613 9.10e-151 451
Msa0689960 AT3G56080.2 49.224 451 205 9 166 606 114 550 6.28e-150 446
Msa0689960 AT5G14430.2 44.917 541 274 11 148 671 70 603 4.24e-149 446
Msa0689960 AT4G19120.1 43.948 537 262 13 157 671 70 589 2.42e-148 444
Msa0689960 AT4G19120.2 43.948 537 262 13 157 671 70 589 2.42e-148 444
Msa0689960 AT1G26850.2 43.527 533 276 11 154 670 83 606 1.35e-146 440
Msa0689960 AT1G26850.1 43.527 533 276 11 154 670 83 606 1.35e-146 440
Msa0689960 AT5G04060.1 42.994 521 276 9 159 669 85 594 1.77e-142 429
Msa0689960 AT1G31850.1 41.728 544 292 11 143 671 62 595 1.73e-141 426
Msa0689960 AT1G31850.2 41.728 544 292 11 143 671 62 595 1.73e-141 426
Msa0689960 AT1G31850.4 41.728 544 292 11 143 671 62 595 1.73e-141 426
Msa0689960 AT1G31850.3 41.728 544 292 11 143 671 62 595 1.73e-141 426
Msa0689960 AT4G00750.1 41.636 550 286 12 148 674 87 624 3.12e-141 427
Msa0689960 AT2G43200.2 41.917 532 280 15 157 671 91 610 4.36e-140 423
Msa0689960 AT2G43200.1 41.917 532 280 15 157 671 91 610 4.36e-140 423
Msa0689960 AT4G18030.1 42.830 530 274 13 157 670 85 601 6.29e-139 420
Msa0689960 AT4G00740.1 42.713 494 258 9 190 671 112 592 3.05e-138 418
Msa0689960 AT4G00740.2 42.713 494 258 9 190 671 112 592 3.05e-138 418
Msa0689960 AT3G10200.1 40.918 523 290 7 157 669 72 585 3.69e-133 404
Msa0689960 AT3G10200.2 42.706 473 253 6 159 622 74 537 4.30e-128 392
Msa0689960 AT1G19430.1 40.514 506 265 13 159 651 223 705 6.92e-124 385
Msa0689960 AT1G19430.3 40.514 506 265 13 159 651 223 705 6.92e-124 385
Msa0689960 AT4G19120.3 44.170 446 211 12 157 580 70 499 9.21e-118 362
Msa0689960 AT1G26850.3 42.755 421 217 10 154 559 83 494 3.41e-106 332
Msa0689960 AT1G78240.1 33.088 544 324 11 155 669 144 676 1.91e-102 328
Msa0689960 AT1G78240.2 33.088 544 324 11 155 669 144 676 1.91e-102 328
Msa0689960 AT1G13860.4 33.761 545 316 13 154 673 78 602 3.93e-96 308
Msa0689960 AT1G13860.3 33.761 545 316 13 154 673 78 602 3.93e-96 308
Msa0689960 AT1G13860.1 33.761 545 316 13 154 673 78 602 3.93e-96 308
Msa0689960 AT1G13860.5 33.761 545 316 13 154 673 78 602 3.93e-96 308
Msa0689960 AT2G03480.2 33.578 545 306 13 153 673 82 594 8.97e-95 305
Msa0689960 AT2G03480.1 34.495 545 312 16 153 673 82 605 4.85e-94 303
Msa0689960 AT1G13860.2 35.333 450 262 11 246 673 4 446 6.14e-84 272
Msa0689960 AT1G19430.2 36.294 394 218 11 159 540 223 595 5.53e-75 253
Msa0689960 AT2G03480.3 32.508 323 198 9 153 462 82 397 5.58e-47 172

Find 202 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGACCTCATCTCTGCTTT+TGG 0.173231 4_4:-57350383 None:intergenic
AAATTTGCGATCAAGAAATT+TGG 0.186954 4_4:+57350184 Msa0689960:CDS
GTGATTTCATAGTTTGATTT+AGG 0.191187 4_4:-57349721 None:intergenic
GTTCTCGCTGTAGAATTAAT+TGG 0.208243 4_4:+57351145 Msa0689960:CDS
TTTATACTTTGAAGCCTATT+AGG 0.228592 4_4:-57352493 None:intergenic
ACGGTGGAGGAGGTTGTGTT+AGG 0.258997 4_4:-57349979 None:intergenic
AAAGATAAGTTTAAATTTCC+AGG 0.291290 4_4:+57350588 Msa0689960:CDS
GAAATTGAAACAGCTTGATT+TGG 0.293480 4_4:-57349902 None:intergenic
CCGTGATTCTCTTGCCATAA+TGG 0.295909 4_4:+57353550 Msa0689960:CDS
ACTCAGTTTCCTCGTTTAAC+AGG 0.300596 4_4:-57349519 None:intergenic
ATGGACATGCGAGCAGGTTT+TGG 0.301982 4_4:+57352634 Msa0689960:CDS
TGTCTCTTGAAATCCAGTTT+TGG 0.302913 4_4:-57350566 None:intergenic
TTGGCTTCATATTCATTCTT+AGG 0.303582 4_4:-57352436 None:intergenic
GTTTGCAAACCCCACCTAAT+AGG 0.304296 4_4:+57352479 Msa0689960:CDS
ATACTTGGACCATATTTCTA+AGG 0.313021 4_4:+57350644 Msa0689960:CDS
AAGATAAAGGTGGCCAAAAC+TGG 0.314752 4_4:+57350553 Msa0689960:CDS
GGTTGTGGTGTTGCTAGTTT+TGG 0.315802 4_4:+57350958 Msa0689960:CDS
TATTGCTGCTTGAAGTTAAT+AGG 0.316128 4_4:+57351310 Msa0689960:CDS
CTCTTGAAGCTCATCCATTA+TGG 0.321098 4_4:-57353564 None:intergenic
TTAAGGCAGAATCAAAATAC+TGG 0.321623 4_4:+57352548 Msa0689960:CDS
AGTAAGTAACCTTAGAAATA+TGG 0.322467 4_4:-57350653 None:intergenic
AGGGGCCTCATGCAAGTTAT+AGG 0.326524 4_4:+57353633 Msa0689960:CDS
TGCCGACCAAATGTAATTTC+AGG 0.330987 4_4:-57350913 None:intergenic
GCGGATTCGGTGGAGAAATT+CGG 0.331054 4_4:+57350040 Msa0689960:CDS
TGTTTATTTATTTATACTAC+TGG 0.349678 4_4:+57353833 Msa0689960:three_prime_UTR
TCCGCCGGCGGTGGCGGTGG+TGG 0.351251 4_4:-57350022 None:intergenic
ACCGCCACCGCCGGCGGATT+CGG 0.356017 4_4:+57350027 Msa0689960:CDS
AATTATACAAATAAGTTAGA+TGG 0.356308 4_4:-57353900 None:intergenic
ATCCAGCGATGGTGGATGAT+TGG 0.359949 4_4:+57350116 Msa0689960:CDS
GCTTCTTCGTGCTTATAAAC+TGG 0.360554 4_4:-57351372 None:intergenic
ATGATTCCTGAAATTACATT+TGG 0.368026 4_4:+57350907 Msa0689960:CDS
AATAAGATTAAGAAATGTTA+TGG 0.375972 4_4:+57352615 Msa0689960:CDS
CACTTATAAGTGAAGCTGTT+TGG 0.380664 4_4:+57354044 Msa0689960:three_prime_UTR
ATGCAATGTGTCATCGATTA+TGG 0.382671 4_4:+57353484 Msa0689960:CDS
ATTGGAGCACGATAACCTTT+AGG 0.384211 4_4:-57350352 None:intergenic
TGCTCTTGAGCGTGGGGTAC+CGG 0.392506 4_4:+57351056 Msa0689960:CDS
ACTCGTCTTGTTGAAGATAA+AGG 0.394264 4_4:+57350540 Msa0689960:CDS
GGACGTATGCAGCAGCTGTT+TGG 0.396822 4_4:-57353871 None:intergenic
CTGATTCTCATGAACATCCT+TGG 0.400399 4_4:-57351025 None:intergenic
CGGTGGAGGAGGTTGTGTTA+GGG 0.400490 4_4:-57349978 None:intergenic
TCATGCAAGTTATAGGGTAT+TGG 0.402166 4_4:+57353640 Msa0689960:CDS
TTCGGGATCGTGAACGAGAA+TGG 0.402853 4_4:+57350058 Msa0689960:CDS
CAAGAGATTGCCAAAGCAAT+AGG 0.404996 4_4:+57353581 Msa0689960:CDS
CGGATTCGGTGGAGAAATTC+GGG 0.405279 4_4:+57350041 Msa0689960:CDS
ACCGAATCCGCCGGCGGTGG+CGG 0.405756 4_4:-57350028 None:intergenic
GAGTGAGTATATACCTTGTT+TGG 0.406292 4_4:+57350225 Msa0689960:CDS
TATATGACAGGCAAGGTGTT+TGG 0.412497 4_4:-57352847 None:intergenic
AGCTTGATTTGGATTGTGAT+TGG 0.414325 4_4:-57349891 None:intergenic
AAACAATACCAAACGCTGTC+AGG 0.417389 4_4:-57351974 None:intergenic
TCCTTCACTTTCTTCTACTT+AGG 0.419363 4_4:+57349806 Msa0689960:CDS
GACGTATGCAGCAGCTGTTT+GGG 0.420634 4_4:-57353870 None:intergenic
GGTGGTGGTGGTGACGGTGG+TGG 0.421127 4_4:-57350007 None:intergenic
TTGGATTGTGATTGGGATCC+GGG 0.423050 4_4:-57349883 None:intergenic
TAAACATAAATAGCAGGTAT+TGG 0.426926 4_4:-57354001 None:intergenic
TTGAGAAAATCGACATTGAT+TGG 0.427177 4_4:-57349743 None:intergenic
TGAGCGTGGGGTACCGGCCA+TGG 0.427310 4_4:+57351062 Msa0689960:CDS
ATGTCGGAGGAGTTTGAGAT+TGG 0.432634 4_4:+57350085 Msa0689960:CDS
GAATCCGCCGGCGGTGGCGG+TGG 0.434889 4_4:-57350025 None:intergenic
TCCAGCGATGGTGGATGATT+GGG 0.440642 4_4:+57350117 Msa0689960:CDS
GCCGGCGGTGGCGGTGGTGG+TGG 0.441811 4_4:-57350019 None:intergenic
CTTCGTGCTTATAAACTGGT+TGG 0.446035 4_4:-57351368 None:intergenic
TGATTCTCATGAACATCCTT+GGG 0.446417 4_4:-57351024 None:intergenic
TTTGGATTGTGATTGGGATC+CGG 0.446440 4_4:-57349884 None:intergenic
ACGTTTATTATATCCTAGTC+AGG 0.448437 4_4:+57351104 Msa0689960:CDS
TGCTCTCTGTTGAGAGGAAA+AGG 0.448948 4_4:+57353077 Msa0689960:CDS
GGGGCCTCATGCAAGTTATA+GGG 0.449263 4_4:+57353634 Msa0689960:CDS
TGTTTGGTTCCTGCTCCTAA+AGG 0.451586 4_4:+57350337 Msa0689960:CDS
GGTGACGGTGGTGGCGGTGA+CGG 0.453390 4_4:-57349998 None:intergenic
ATCTTACCACTCGACTCTGC+TGG 0.457963 4_4:+57351837 Msa0689960:CDS
AAGTTGCCGTCGACGGAGAA+AGG 0.460240 4_4:+57350268 Msa0689960:CDS
TGCGTGCCAGCCTATTGCTT+TGG 0.465307 4_4:-57353591 None:intergenic
TTCGTGCTTATAAACTGGTT+GGG 0.467536 4_4:-57351367 None:intergenic
GCTTGATTTGGATTGTGATT+GGG 0.467657 4_4:-57349890 None:intergenic
TTCAGTTTGCTCTTGAGCGT+GGG 0.467667 4_4:+57351049 Msa0689960:CDS
TTGCAAACGCGCAGGCCAAT+CGG 0.473912 4_4:-57352464 None:intergenic
AAGTTTAAATTTCCAGGAGG+TGG 0.475407 4_4:+57350594 Msa0689960:CDS
TACTTTGAAGCCTATTAGGT+GGG 0.475555 4_4:-57352489 None:intergenic
GGTGGTGGTGACGGTGGTGG+CGG 0.476414 4_4:-57350004 None:intergenic
AAATAGCAGCTATTGTCAAA+AGG 0.476652 4_4:-57351902 None:intergenic
GCAAATGCTGCCACCATGGC+CGG 0.478324 4_4:-57351075 None:intergenic
GTGATGACCCTGACAGCGTT+TGG 0.479305 4_4:+57351966 Msa0689960:CDS
GTGTGAAGAAGATGAGTTGT+TGG 0.479947 4_4:-57349850 None:intergenic
GGCGGTGGTGGTGGTGACGG+TGG 0.480424 4_4:-57350010 None:intergenic
TTAAGCAGAAACTTGACAGC+TGG 0.480495 4_4:+57352797 Msa0689960:CDS
CTTATGTTCGTGCTTTGCAC+TGG 0.480720 4_4:+57352587 Msa0689960:CDS
GGTGGCGGTGACGGTGGAGG+AGG 0.486478 4_4:-57349989 None:intergenic
AAGATGGCTACATTGCAGTA+TGG 0.487098 4_4:+57351873 Msa0689960:CDS
GGTGGTGGCGGTGACGGTGG+AGG 0.487246 4_4:-57349992 None:intergenic
ATATATGACCGTGGATTGAT+TGG 0.487341 4_4:+57352865 Msa0689960:CDS
TGCTATTTAAACCGTGAGGC+AGG 0.489764 4_4:+57351917 Msa0689960:CDS
TCTTCAACAAGACGAGTATG+AGG 0.492603 4_4:-57350534 None:intergenic
GGTGGCGGTGGTGGTGGTGA+CGG 0.493668 4_4:-57350013 None:intergenic
GAACGGCATTGTCCTGAAGA+TGG 0.494620 4_4:+57350301 Msa0689960:CDS
TCCACCGAATCCGCCGGCGG+TGG 0.495774 4_4:-57350031 None:intergenic
TGTCGGAGGAGTTTGAGATT+GGG 0.500106 4_4:+57350086 Msa0689960:CDS
ACCCAATCATCCACCATCGC+TGG 0.500579 4_4:-57350118 None:intergenic
CGCTGTCAGGGTCATCACTT+GGG 0.501410 4_4:-57351961 None:intergenic
ATAAATTGTGTACCACCTCC+TGG 0.502746 4_4:-57350606 None:intergenic
AGAAGCTTTAGAAGAACAAT+GGG 0.505492 4_4:+57351389 Msa0689960:CDS
ACGCTGTCAGGGTCATCACT+TGG 0.508084 4_4:-57351962 None:intergenic
GACTAATTTGCCATGTTATG+TGG 0.514111 4_4:-57353738 None:intergenic
ACCACCACCACCGCCACCGC+CGG 0.515522 4_4:+57350018 Msa0689960:CDS
ATTCAGTTTGCTCTTGAGCG+TGG 0.515706 4_4:+57351048 Msa0689960:CDS
CGCAGGCCAATCGGTAATGT+TGG 0.517728 4_4:-57352455 None:intergenic
GAGGCCCCTCGGCTGTGTCA+CGG 0.520089 4_4:-57353619 None:intergenic
TGCTGCATGCAGGAAATCAT+AGG 0.521747 4_4:-57353050 None:intergenic
GTTGCTCTTGATGTTGGTTG+TGG 0.523426 4_4:+57350943 Msa0689960:CDS
AATGTTATGGACATGCGAGC+AGG 0.525629 4_4:+57352628 Msa0689960:CDS
ACACGGCGCAGATGAATACT+TGG 0.527645 4_4:+57350629 Msa0689960:CDS
CTCTCACCTTTCTCCGTCGA+CGG 0.528899 4_4:-57350274 None:intergenic
CACCATGTCTGTAGCTCCCA+AGG 0.531675 4_4:+57351008 Msa0689960:CDS
CGATTATGGTTGAGATGGAT+CGG 0.532137 4_4:+57353498 Msa0689960:CDS
ATGAATGTTGTTCCTGTCAG+TGG 0.532889 4_4:+57352823 Msa0689960:CDS
ATACGAGTTGCTCTTGATGT+TGG 0.534435 4_4:+57350937 Msa0689960:CDS
ATTATCTAAACATAAATAGC+AGG 0.536131 4_4:-57354007 None:intergenic
TTCCTGAAATTACATTTGGT+CGG 0.536473 4_4:+57350911 Msa0689960:CDS
CTTGATCGATTAGTGCGGAA+AGG 0.539318 4_4:-57349949 None:intergenic
AATTTCTCCACCGAATCCGC+CGG 0.543630 4_4:-57350037 None:intergenic
AAGAAGCTTTAGAAGAACAA+TGG 0.544081 4_4:+57351388 Msa0689960:CDS
GGTGGGGTTTGCAAACGCGC+AGG 0.544143 4_4:-57352472 None:intergenic
TGCAGGAAATCATAGGTTCT+CGG 0.545388 4_4:-57353043 None:intergenic
TCTTCTACTTAGGTAAACAT+TGG 0.546338 4_4:+57349816 Msa0689960:CDS
TGATTGGAGTTATGCATGAC+TGG 0.548867 4_4:+57352881 Msa0689960:CDS
ATACTTTGAAGCCTATTAGG+TGG 0.549050 4_4:-57352490 None:intergenic
GCACGATAACCTTTAGGAGC+AGG 0.549495 4_4:-57350346 None:intergenic
TAAGCAGAAACTTGACAGCT+GGG 0.549606 4_4:+57352798 Msa0689960:CDS
ATTTATTTATACTACTGGGT+AGG 0.553132 4_4:+57353838 Msa0689960:three_prime_UTR
GTTCTCGGATAGGTGTCAAA+TGG 0.554639 4_4:-57353028 None:intergenic
GACGGTGGTGGCGGTGACGG+TGG 0.555432 4_4:-57349995 None:intergenic
TTTGTCACATCTGAGATGAA+TGG 0.557954 4_4:-57349662 None:intergenic
AAGGTGTTTGGACCACTGAC+AGG 0.559136 4_4:-57352835 None:intergenic
GTTAATAGGATGCTTAGAGC+AGG 0.559683 4_4:+57351324 Msa0689960:CDS
CGGATGTATACACGTCCACC+AGG 0.559739 4_4:-57353530 None:intergenic
GAGGTTTAGTTCCTGCCTCA+CGG 0.560304 4_4:-57351928 None:intergenic
AATAGGATGCTTAGAGCAGG+AGG 0.562811 4_4:+57351327 Msa0689960:CDS
GAGCTTCGATCCAGCGATGG+TGG 0.563296 4_4:+57350108 Msa0689960:CDS
TCATCACTTGGGTCACATAG+AGG 0.565821 4_4:-57351950 None:intergenic
AGAGCAGGTATGCTGCATGC+AGG 0.566438 4_4:-57353060 None:intergenic
ACCACCACCGCCACCGCCGG+CGG 0.566733 4_4:+57350021 Msa0689960:CDS
GCCACCGCCGGCGGATTCGG+TGG 0.568136 4_4:+57350030 Msa0689960:CDS
TTGGTGCGTACTTACTGCAA+CGG 0.568191 4_4:+57350977 Msa0689960:CDS
AATCCACGGTCATATATGAC+AGG 0.568485 4_4:-57352859 None:intergenic
TTAGGTAAACATTGGTCCGA+TGG 0.573218 4_4:+57349824 Msa0689960:CDS
GATTAAGAAGTTGCCGTCGA+CGG 0.573354 4_4:+57350261 Msa0689960:CDS
AGATTGCCAAAGCAATAGGC+TGG 0.576012 4_4:+57353585 Msa0689960:CDS
AAGTATCACTTCCTCACAAG+AGG 0.576224 4_4:+57353799 Msa0689960:three_prime_UTR
GTTTATTTATTTATACTACT+GGG 0.580764 4_4:+57353834 Msa0689960:three_prime_UTR
ACTTTGAAGCCTATTAGGTG+GGG 0.581473 4_4:-57352488 None:intergenic
ATTGTGATTGGGATCCGGGT+CGG 0.583505 4_4:-57349879 None:intergenic
GTTATCGTGCTCCAATTCCA+TGG 0.586892 4_4:+57350359 Msa0689960:CDS
ATTGTTCACTGCCTCTTGTG+AGG 0.588104 4_4:-57353810 None:intergenic
AACAATACCAAACGCTGTCA+GGG 0.589427 4_4:-57351973 None:intergenic
GATGAGTTGTTGGTATCCAT+CGG 0.592241 4_4:-57349840 None:intergenic
AGAATTAATTGGACTCGAGA+TGG 0.592617 4_4:+57351156 Msa0689960:CDS
GAAATCATAGGTTCTCGGAT+AGG 0.593141 4_4:-57353038 None:intergenic
ATCACTCCGTGACACAGCCG+AGG 0.602179 4_4:+57353613 Msa0689960:CDS
TAACGAAACGCAAGTTGAGA+AGG 0.603719 4_4:+57350141 Msa0689960:CDS
ATGAAGCCAACATTACCGAT+TGG 0.604632 4_4:+57352449 Msa0689960:CDS
ATACAGTAAACCACATAACA+TGG 0.608310 4_4:+57353728 Msa0689960:three_prime_UTR
TCAGTTTGCTCTTGAGCGTG+GGG 0.610048 4_4:+57351050 Msa0689960:CDS
CATACCTGCTCTCTGTTGAG+AGG 0.611929 4_4:+57353071 Msa0689960:CDS
ATAACTTGCATGAGGCCCCT+CGG 0.612863 4_4:-57353630 None:intergenic
TTCTCCACCGAATCCGCCGG+CGG 0.615206 4_4:-57350034 None:intergenic
CTTCACACAAAACTCCGACC+CGG 0.615867 4_4:+57349865 Msa0689960:CDS
ATCAAGTCAAAAGCCTGACT+AGG 0.617662 4_4:-57351117 None:intergenic
CCATTATGGCAAGAGAATCA+CGG 0.617800 4_4:-57353550 None:intergenic
GTCATCGATTATGGTTGAGA+TGG 0.619641 4_4:+57353493 Msa0689960:CDS
TGGGAGCTTCGATCCAGCGA+TGG 0.620061 4_4:+57350105 Msa0689960:CDS
TATGATAAGTCATGTGACAT+GGG 0.627611 4_4:-57349494 None:intergenic
GAACGAGAATGGAACAATGT+CGG 0.630243 4_4:+57350069 Msa0689960:CDS
GTATGATAAGTCATGTGACA+TGG 0.635979 4_4:-57349495 None:intergenic
AAATTTGGATTGTGTTCACG+AGG 0.639341 4_4:+57350199 Msa0689960:CDS
GCTTCTACATTATCCAAACA+AGG 0.642672 4_4:-57350238 None:intergenic
TCACTCCGTGACACAGCCGA+GGG 0.649083 4_4:+57353614 Msa0689960:CDS
AGTTGCAAATGCTGCCACCA+TGG 0.650629 4_4:-57351079 None:intergenic
ACCTAAGTAGAAGAAAGTGA+AGG 0.651223 4_4:-57349807 None:intergenic
GCATAACTCCAATCAATCCA+CGG 0.651252 4_4:-57352873 None:intergenic
AAATAAGTTAGATGGTGCAG+TGG 0.653965 4_4:-57353892 None:intergenic
GCTTTAGAAGAACAATGGGA+AGG 0.660425 4_4:+57351393 Msa0689960:CDS
ATGGCCCAAAAGCAGAGATG+AGG 0.661245 4_4:+57350378 Msa0689960:CDS
GATAAGTTTAAATTTCCAGG+AGG 0.663790 4_4:+57350591 Msa0689960:CDS
CGAGAATGGAACAATGTCGG+AGG 0.664613 4_4:+57350072 Msa0689960:CDS
GCGTGGGGTACCGGCCATGG+TGG 0.665549 4_4:+57351065 Msa0689960:CDS
CGTCTTGTTGAAGATAAAGG+TGG 0.665573 4_4:+57350543 Msa0689960:CDS
TCACTTGGGTCACATAGAGG+AGG 0.666578 4_4:-57351947 None:intergenic
ATCCTTGGGAGCTACAGACA+TGG 0.668744 4_4:-57351010 None:intergenic
AGAAAGGTGAGAGATTTGAA+CGG 0.670333 4_4:+57350284 Msa0689960:CDS
GAAACGCAAGTTGAGAAGGA+AGG 0.676993 4_4:+57350145 Msa0689960:CDS
AAACTTCCAGCAGAGTCGAG+TGG 0.678319 4_4:-57351843 None:intergenic
ATGGATCGGATACTAAGACC+TGG 0.683061 4_4:+57353512 Msa0689960:CDS
GCTACGCGCTTGAAACAATG+AGG 0.686117 4_4:+57353679 Msa0689960:exon
ACGGTCATATATGACAGGCA+AGG 0.687136 4_4:-57352854 None:intergenic
ACGCGCTTGAAACAATGAGG+TGG 0.704161 4_4:+57353682 Msa0689960:exon
TTGCCTGTCATATATGACCG+TGG 0.704215 4_4:+57352856 Msa0689960:CDS
GGTGGTACACAATTTATACA+CGG 0.706977 4_4:+57350612 Msa0689960:CDS
GATCGGATACTAAGACCTGG+TGG 0.718133 4_4:+57353515 Msa0689960:CDS
ATAGGATGCTTAGAGCAGGA+GGG 0.719045 4_4:+57351328 Msa0689960:CDS
AATACCCTATAACTTGCATG+AGG 0.719217 4_4:-57353638 None:intergenic
TATCATACTCCTGTTAAACG+AGG 0.726957 4_4:+57349510 Msa0689960:five_prime_UTR
CACTCCGTGACACAGCCGAG+GGG 0.728820 4_4:+57353615 Msa0689960:CDS
TAGCTGCTATTTAAACCGTG+AGG 0.733432 4_4:+57351913 Msa0689960:CDS
ATAGCAGGTATTGGACTACG+TGG 0.758509 4_4:-57353992 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAATAAACATTATAG+GGG - chr4_4:57351574-57351593 None:intergenic 10.0%
!!! TGAAGTTTTTATTGAAATTA+GGG - chr4_4:57349928-57349947 None:intergenic 15.0%
!!! TTGAAGTTTTTATTGAAATT+AGG - chr4_4:57349929-57349948 None:intergenic 15.0%
!!! AGCTATTTTTTTTTTTTTTG+TGG + chr4_4:57350487-57350506 Msa0689960:intron 15.0%
!!! GCTATTTTTTTTTTTTTTGT+GGG + chr4_4:57350488-57350507 Msa0689960:intron 15.0%
!!! ATTATGCACATTTTTTTTAT+AGG + chr4_4:57352025-57352044 Msa0689960:intron 15.0%
!!! AATTTTTTATGATACTCAAA+TGG - chr4_4:57352081-57352100 None:intergenic 15.0%
!! ACTGTTATTATCAAATTTAA+TGG + chr4_4:57352340-57352359 Msa0689960:intron 15.0%
!!! ATTATTTGCTTTATTTATCT+AGG + chr4_4:57352380-57352399 Msa0689960:intron 15.0%
!! AATAAGATTAAGAAATGTTA+TGG + chr4_4:57352615-57352634 Msa0689960:CDS 15.0%
!! TGTTTATTTATTTATACTAC+TGG + chr4_4:57353833-57353852 Msa0689960:three_prime_UTR 15.0%
!! GTTTATTTATTTATACTACT+GGG + chr4_4:57353834-57353853 Msa0689960:three_prime_UTR 15.0%
!! AATTATACAAATAAGTTAGA+TGG - chr4_4:57353903-57353922 None:intergenic 15.0%
!!! GAAGTTTTTATTGAAATTAG+GGG - chr4_4:57349927-57349946 None:intergenic 20.0%
!! AAAGATAAGTTTAAATTTCC+AGG + chr4_4:57350588-57350607 Msa0689960:CDS 20.0%
!! ATAAATTAGATGTCATTGTA+TGG + chr4_4:57350808-57350827 Msa0689960:intron 20.0%
!! TTCAACAAATTCAATCTAAA+CGG - chr4_4:57351437-57351456 None:intergenic 20.0%
!! ATTTAACTCTGATTATATCA+TGG - chr4_4:57352157-57352176 None:intergenic 20.0%
!! ATATAATCAGAGTTAAATGT+AGG + chr4_4:57352159-57352178 Msa0689960:intron 20.0%
!!! GAACTAGTTTTACTTTTTTA+GGG - chr4_4:57352208-57352227 None:intergenic 20.0%
!!! ATTTGATAATAACAGTAAGA+TGG - chr4_4:57352336-57352355 None:intergenic 20.0%
!!! TCTTTTATGTATCTTGAATA+AGG - chr4_4:57352918-57352937 None:intergenic 20.0%
!! TATTTCATGATTTATGCTAT+AGG + chr4_4:57352999-57353018 Msa0689960:intron 20.0%
!! ATTATCTAAACATAAATAGC+AGG - chr4_4:57354010-57354029 None:intergenic 20.0%
!! GTGATTTCATAGTTTGATTT+AGG - chr4_4:57349724-57349743 None:intergenic 25.0%
! AAATTTGCGATCAAGAAATT+TGG + chr4_4:57350184-57350203 Msa0689960:CDS 25.0%
! TGGTAAAAAGTTGAATTGTT+TGG + chr4_4:57350321-57350340 Msa0689960:CDS 25.0%
! TTGCTTTCAATTAAGCTAAA+TGG + chr4_4:57350424-57350443 Msa0689960:intron 25.0%
! TGCTTTCAATTAAGCTAAAT+GGG + chr4_4:57350425-57350444 Msa0689960:intron 25.0%
! AGTAAGTAACCTTAGAAATA+TGG - chr4_4:57350656-57350675 None:intergenic 25.0%
! ATGATTCCTGAAATTACATT+TGG + chr4_4:57350907-57350926 Msa0689960:CDS 25.0%
! TAAACTGTATAGTGTCAAAT+AGG + chr4_4:57351650-57351669 Msa0689960:intron 25.0%
! TTGAACAGTCAATTAGTTAT+TGG + chr4_4:57351724-57351743 Msa0689960:intron 25.0%
! TGAACAGTCAATTAGTTATT+GGG + chr4_4:57351725-57351744 Msa0689960:intron 25.0%
!!! TGGAAGTTTTTGAAAAAAGA+TGG + chr4_4:57351857-57351876 Msa0689960:CDS 25.0%
!!! GGAACTAGTTTTACTTTTTT+AGG - chr4_4:57352209-57352228 None:intergenic 25.0%
!!! TTTATACTTTGAAGCCTATT+AGG - chr4_4:57352496-57352515 None:intergenic 25.0%
!!! CTTGTTGTTAATATACATCA+GGG + chr4_4:57352685-57352704 Msa0689960:intron 25.0%
! ATTTATTTATACTACTGGGT+AGG + chr4_4:57353838-57353857 Msa0689960:three_prime_UTR 25.0%
! TAAACATAAATAGCAGGTAT+TGG - chr4_4:57354004-57354023 None:intergenic 25.0%
TATGATAAGTCATGTGACAT+GGG - chr4_4:57349497-57349516 None:intergenic 30.0%
!!! TACCTTTGTGTTCTGTTTTT+TGG - chr4_4:57349608-57349627 None:intergenic 30.0%
TTGAGAAAATCGACATTGAT+TGG - chr4_4:57349746-57349765 None:intergenic 30.0%
TCTTCTACTTAGGTAAACAT+TGG + chr4_4:57349816-57349835 Msa0689960:CDS 30.0%
GAAATTGAAACAGCTTGATT+TGG - chr4_4:57349905-57349924 None:intergenic 30.0%
! TTTTTCTTGATCGATTAGTG+CGG - chr4_4:57349957-57349976 None:intergenic 30.0%
! TTCAACTTTTTACCATCTTC+AGG - chr4_4:57350316-57350335 None:intergenic 30.0%
AATGGGTGTTTCAAATTATG+AGG + chr4_4:57350442-57350461 Msa0689960:intron 30.0%
!!! TTTTTTTTTTTTGTGGGTGC+AGG + chr4_4:57350494-57350513 Msa0689960:intron 30.0%
GATAAGTTTAAATTTCCAGG+AGG + chr4_4:57350591-57350610 Msa0689960:CDS 30.0%
! ATACTTGGACCATATTTCTA+AGG + chr4_4:57350644-57350663 Msa0689960:CDS 30.0%
! TGTCATTGTATGGTGTATTT+TGG + chr4_4:57350818-57350837 Msa0689960:intron 30.0%
!!! ATTTTGGTTTCACCGTTTTT+TGG + chr4_4:57350834-57350853 Msa0689960:intron 30.0%
!!! TTTTGGTTTCACCGTTTTTT+GGG + chr4_4:57350835-57350854 Msa0689960:intron 30.0%
TTCCTGAAATTACATTTGGT+CGG + chr4_4:57350911-57350930 Msa0689960:CDS 30.0%
ACGTTTATTATATCCTAGTC+AGG + chr4_4:57351104-57351123 Msa0689960:CDS 30.0%
GTATAATGAGCAATAGTTCT+TGG + chr4_4:57351197-57351216 Msa0689960:intron 30.0%
TTGTTTACTTGTGATGAAGA+TGG + chr4_4:57351285-57351304 Msa0689960:intron 30.0%
TGTTTACTTGTGATGAAGAT+GGG + chr4_4:57351286-57351305 Msa0689960:intron 30.0%
! TATTGCTGCTTGAAGTTAAT+AGG + chr4_4:57351310-57351329 Msa0689960:CDS 30.0%
!! AAGAAGCTTTAGAAGAACAA+TGG + chr4_4:57351388-57351407 Msa0689960:CDS 30.0%
!! AGAAGCTTTAGAAGAACAAT+GGG + chr4_4:57351389-57351408 Msa0689960:CDS 30.0%
!!! TTGTTGAAGCATTTTAGCTA+TGG + chr4_4:57351449-57351468 Msa0689960:intron 30.0%
GAACAGTCAATTAGTTATTG+GGG + chr4_4:57351726-57351745 Msa0689960:intron 30.0%
AAATAGCAGCTATTGTCAAA+AGG - chr4_4:57351905-57351924 None:intergenic 30.0%
AAAATTGACAGACTTGACTA+TGG - chr4_4:57352055-57352074 None:intergenic 30.0%
!!! GTGTTTTAACATAGCAAGAA+TGG - chr4_4:57352186-57352205 None:intergenic 30.0%
TTGGCTTCATATTCATTCTT+AGG - chr4_4:57352439-57352458 None:intergenic 30.0%
! ATCCAGAAAAGAGCTTTTTA+AGG + chr4_4:57352531-57352550 Msa0689960:CDS 30.0%
TTAAGGCAGAATCAAAATAC+TGG + chr4_4:57352548-57352567 Msa0689960:CDS 30.0%
CCTGATGTATATTAACAACA+AGG - chr4_4:57352687-57352706 None:intergenic 30.0%
!! CCTTGTTGTTAATATACATC+AGG + chr4_4:57352684-57352703 Msa0689960:intron 30.0%
AAACAAATACATGAAATCCC+AGG - chr4_4:57353145-57353164 None:intergenic 30.0%
TTGTGATGTTGAAAAGAAAC+TGG + chr4_4:57353164-57353183 Msa0689960:intron 30.0%
AGTTTGACAGGAATTTATGT+AGG + chr4_4:57353212-57353231 Msa0689960:intron 30.0%
GTTTGACAGGAATTTATGTA+GGG + chr4_4:57353213-57353232 Msa0689960:intron 30.0%
TAGGGATTAAAAACGAAAGT+TGG + chr4_4:57353231-57353250 Msa0689960:intron 30.0%
AGGGATTAAAAACGAAAGTT+GGG + chr4_4:57353232-57353251 Msa0689960:intron 30.0%
AGATGCACAAATATGTAGAT+TGG - chr4_4:57353326-57353345 None:intergenic 30.0%
AAATAAGAAACTTGCAACAC+TGG + chr4_4:57353418-57353437 Msa0689960:intron 30.0%
ATACAGTAAACCACATAACA+TGG + chr4_4:57353728-57353747 Msa0689960:three_prime_UTR 30.0%
GTATGATAAGTCATGTGACA+TGG - chr4_4:57349498-57349517 None:intergenic 35.0%
TATCATACTCCTGTTAAACG+AGG + chr4_4:57349510-57349529 Msa0689960:five_prime_UTR 35.0%
CTCCAAAAAACAGAACACAA+AGG + chr4_4:57349603-57349622 Msa0689960:five_prime_UTR 35.0%
! TTTGTCACATCTGAGATGAA+TGG - chr4_4:57349665-57349684 None:intergenic 35.0%
TCCTTCACTTTCTTCTACTT+AGG + chr4_4:57349806-57349825 Msa0689960:CDS 35.0%
ACCTAAGTAGAAGAAAGTGA+AGG - chr4_4:57349810-57349829 None:intergenic 35.0%
!! GCTTGATTTGGATTGTGATT+GGG - chr4_4:57349893-57349912 None:intergenic 35.0%
!! AGCTTGATTTGGATTGTGAT+TGG - chr4_4:57349894-57349913 None:intergenic 35.0%
AAATTTGGATTGTGTTCACG+AGG + chr4_4:57350199-57350218 Msa0689960:CDS 35.0%
GAGTGAGTATATACCTTGTT+TGG + chr4_4:57350225-57350244 Msa0689960:CDS 35.0%
GCTTCTACATTATCCAAACA+AGG - chr4_4:57350241-57350260 None:intergenic 35.0%
AGAAAGGTGAGAGATTTGAA+CGG + chr4_4:57350284-57350303 Msa0689960:CDS 35.0%
! ACTCGTCTTGTTGAAGATAA+AGG + chr4_4:57350540-57350559 Msa0689960:CDS 35.0%
! TGTCTCTTGAAATCCAGTTT+TGG - chr4_4:57350569-57350588 None:intergenic 35.0%
AAGTTTAAATTTCCAGGAGG+TGG + chr4_4:57350594-57350613 Msa0689960:CDS 35.0%
GGTGGTACACAATTTATACA+CGG + chr4_4:57350612-57350631 Msa0689960:CDS 35.0%
TGCAACCATGAAATGTAATG+TGG - chr4_4:57350731-57350750 None:intergenic 35.0%
GCAAGATAGTGAAATGTGAT+TGG + chr4_4:57350748-57350767 Msa0689960:intron 35.0%
ACTGATACAGTCCCAAAAAA+CGG - chr4_4:57350849-57350868 None:intergenic 35.0%
ACTGTATCAGTGTATCTTGT+AGG + chr4_4:57350858-57350877 Msa0689960:intron 35.0%
TGATTCTCATGAACATCCTT+GGG - chr4_4:57351027-57351046 None:intergenic 35.0%
GTTCTCGCTGTAGAATTAAT+TGG + chr4_4:57351145-57351164 Msa0689960:CDS 35.0%
AGAATTAATTGGACTCGAGA+TGG + chr4_4:57351156-57351175 Msa0689960:CDS 35.0%
TTCGTGCTTATAAACTGGTT+GGG - chr4_4:57351370-57351389 None:intergenic 35.0%
AGCAATCAAATTGTTGAGAG+AGG - chr4_4:57351521-57351540 None:intergenic 35.0%
GTCTTATATGCTATGACTTG+AGG + chr4_4:57351617-57351636 Msa0689960:intron 35.0%
!! ACATTGACTCATCATAGAAC+AGG - chr4_4:57351784-57351803 None:intergenic 35.0%
ATGATGAGTCAATGTAACTC+TGG + chr4_4:57351789-57351808 Msa0689960:intron 35.0%
TGATGAGTCAATGTAACTCT+GGG + chr4_4:57351790-57351809 Msa0689960:intron 35.0%
TATAATCGTGACAAGATCTG+AGG - chr4_4:57352005-57352024 None:intergenic 35.0%
ACTAGTTCCTTTCTTCATTC+TGG + chr4_4:57352220-57352239 Msa0689960:intron 35.0%
AGTGTAACCAGAATGAAGAA+AGG - chr4_4:57352230-57352249 None:intergenic 35.0%
!! TACTTTGAAGCCTATTAGGT+GGG - chr4_4:57352492-57352511 None:intergenic 35.0%
!! ATACTTTGAAGCCTATTAGG+TGG - chr4_4:57352493-57352512 None:intergenic 35.0%
! TGCCTTAAAAAGCTCTTTTC+TGG - chr4_4:57352536-57352555 None:intergenic 35.0%
! ATATATGACCGTGGATTGAT+TGG + chr4_4:57352865-57352884 Msa0689960:CDS 35.0%
CCAACAAAAAAGTAATGCAG+AGG - chr4_4:57352969-57352988 None:intergenic 35.0%
!!! CCTCTGCATTACTTTTTTGT+TGG + chr4_4:57352966-57352985 Msa0689960:intron 35.0%
GAGCTAACAAGTAGAGAAAA+GGG - chr4_4:57353105-57353124 None:intergenic 35.0%
! ATGCAATGTGTCATCGATTA+TGG + chr4_4:57353484-57353503 Msa0689960:CDS 35.0%
! AATACCCTATAACTTGCATG+AGG - chr4_4:57353641-57353660 None:intergenic 35.0%
TCATGCAAGTTATAGGGTAT+TGG + chr4_4:57353640-57353659 Msa0689960:CDS 35.0%
! GACTAATTTGCCATGTTATG+TGG - chr4_4:57353741-57353760 None:intergenic 35.0%
AAATAAGTTAGATGGTGCAG+TGG - chr4_4:57353895-57353914 None:intergenic 35.0%
ACTCAGTTTCCTCGTTTAAC+AGG - chr4_4:57349522-57349541 None:intergenic 40.0%
TTAGGTAAACATTGGTCCGA+TGG + chr4_4:57349824-57349843 Msa0689960:CDS 40.0%
GATGAGTTGTTGGTATCCAT+CGG - chr4_4:57349843-57349862 None:intergenic 40.0%
GTGTGAAGAAGATGAGTTGT+TGG - chr4_4:57349853-57349872 None:intergenic 40.0%
TTTGGATTGTGATTGGGATC+CGG - chr4_4:57349887-57349906 None:intergenic 40.0%
GAACGAGAATGGAACAATGT+CGG + chr4_4:57350069-57350088 Msa0689960:CDS 40.0%
! TAACGAAACGCAAGTTGAGA+AGG + chr4_4:57350141-57350160 Msa0689960:CDS 40.0%
ATTGGAGCACGATAACCTTT+AGG - chr4_4:57350355-57350374 None:intergenic 40.0%
!! TTGACCTCATCTCTGCTTTT+GGG - chr4_4:57350385-57350404 None:intergenic 40.0%
! TTTGACCTCATCTCTGCTTT+TGG - chr4_4:57350386-57350405 None:intergenic 40.0%
!!! TTTTTTTGTGGGTGCAGGTA+TGG + chr4_4:57350499-57350518 Msa0689960:intron 40.0%
TCTTCAACAAGACGAGTATG+AGG - chr4_4:57350537-57350556 None:intergenic 40.0%
! CGTCTTGTTGAAGATAAAGG+TGG + chr4_4:57350543-57350562 Msa0689960:CDS 40.0%
AAGATAAAGGTGGCCAAAAC+TGG + chr4_4:57350553-57350572 Msa0689960:CDS 40.0%
ATAAATTGTGTACCACCTCC+TGG - chr4_4:57350609-57350628 None:intergenic 40.0%
TGCCGACCAAATGTAATTTC+AGG - chr4_4:57350916-57350935 None:intergenic 40.0%
ATACGAGTTGCTCTTGATGT+TGG + chr4_4:57350937-57350956 Msa0689960:CDS 40.0%
CTGATTCTCATGAACATCCT+TGG - chr4_4:57351028-57351047 None:intergenic 40.0%
ATCAAGTCAAAAGCCTGACT+AGG - chr4_4:57351120-57351139 None:intergenic 40.0%
GTTAATAGGATGCTTAGAGC+AGG + chr4_4:57351324-57351343 Msa0689960:CDS 40.0%
!!! AGCAGGAGGGTATTTTGTTT+GGG + chr4_4:57351341-57351360 Msa0689960:CDS 40.0%
CTTCGTGCTTATAAACTGGT+TGG - chr4_4:57351371-57351390 None:intergenic 40.0%
GCTTCTTCGTGCTTATAAAC+TGG - chr4_4:57351375-57351394 None:intergenic 40.0%
!! GCTTTAGAAGAACAATGGGA+AGG + chr4_4:57351393-57351412 Msa0689960:CDS 40.0%
CAAATTGTTGAGAGAGGTCT+AGG - chr4_4:57351515-57351534 None:intergenic 40.0%
CAGTTCGAGAAAAGTAGGAA+AGG - chr4_4:57351702-57351721 None:intergenic 40.0%
CAAGTCAGTTCGAGAAAAGT+AGG - chr4_4:57351707-57351726 None:intergenic 40.0%
AAGATGGCTACATTGCAGTA+TGG + chr4_4:57351873-57351892 Msa0689960:CDS 40.0%
! TAGCTGCTATTTAAACCGTG+AGG + chr4_4:57351913-57351932 Msa0689960:CDS 40.0%
AACAATACCAAACGCTGTCA+GGG - chr4_4:57351976-57351995 None:intergenic 40.0%
AAACAATACCAAACGCTGTC+AGG - chr4_4:57351977-57351996 None:intergenic 40.0%
ATGAAGCCAACATTACCGAT+TGG + chr4_4:57352449-57352468 Msa0689960:CDS 40.0%
!! ACTTTGAAGCCTATTAGGTG+GGG - chr4_4:57352491-57352510 None:intergenic 40.0%
TTAAGCAGAAACTTGACAGC+TGG + chr4_4:57352797-57352816 Msa0689960:CDS 40.0%
TAAGCAGAAACTTGACAGCT+GGG + chr4_4:57352798-57352817 Msa0689960:CDS 40.0%
ATGAATGTTGTTCCTGTCAG+TGG + chr4_4:57352823-57352842 Msa0689960:CDS 40.0%
! TATATGACAGGCAAGGTGTT+TGG - chr4_4:57352850-57352869 None:intergenic 40.0%
AATCCACGGTCATATATGAC+AGG - chr4_4:57352862-57352881 None:intergenic 40.0%
GCATAACTCCAATCAATCCA+CGG - chr4_4:57352876-57352895 None:intergenic 40.0%
TGATTGGAGTTATGCATGAC+TGG + chr4_4:57352881-57352900 Msa0689960:CDS 40.0%
AGACACTAGTGTTCTCAATG+TGG + chr4_4:57352935-57352954 Msa0689960:intron 40.0%
GAAATCATAGGTTCTCGGAT+AGG - chr4_4:57353041-57353060 None:intergenic 40.0%
TGCAGGAAATCATAGGTTCT+CGG - chr4_4:57353046-57353065 None:intergenic 40.0%
GGAGCTAACAAGTAGAGAAA+AGG - chr4_4:57353106-57353125 None:intergenic 40.0%
CATTATCTCCTTAACTGCCT+GGG + chr4_4:57353125-57353144 Msa0689960:intron 40.0%
GTTGAAAAGAAACTGGTTGC+TGG + chr4_4:57353171-57353190 Msa0689960:intron 40.0%
ACTGGTTGCTGGAAATATGT+AGG + chr4_4:57353182-57353201 Msa0689960:intron 40.0%
CTGGTTGCTGGAAATATGTA+GGG + chr4_4:57353183-57353202 Msa0689960:intron 40.0%
TGGTTGCTGGAAATATGTAG+GGG + chr4_4:57353184-57353203 Msa0689960:intron 40.0%
! GTCATCGATTATGGTTGAGA+TGG + chr4_4:57353493-57353512 Msa0689960:CDS 40.0%
CGATTATGGTTGAGATGGAT+CGG + chr4_4:57353498-57353517 Msa0689960:CDS 40.0%
CCATTATGGCAAGAGAATCA+CGG - chr4_4:57353553-57353572 None:intergenic 40.0%
CTCTTGAAGCTCATCCATTA+TGG - chr4_4:57353567-57353586 None:intergenic 40.0%
CAAGAGATTGCCAAAGCAAT+AGG + chr4_4:57353581-57353600 Msa0689960:CDS 40.0%
AAGTATCACTTCCTCACAAG+AGG + chr4_4:57353799-57353818 Msa0689960:three_prime_UTR 40.0%
!! AGCAACGATTTTGAGAGCGT+TGG - chr4_4:57349774-57349793 None:intergenic 45.0%
TTGGATTGTGATTGGGATCC+GGG - chr4_4:57349886-57349905 None:intergenic 45.0%
CTTGATCGATTAGTGCGGAA+AGG - chr4_4:57349952-57349971 None:intergenic 45.0%
! ATGTCGGAGGAGTTTGAGAT+TGG + chr4_4:57350085-57350104 Msa0689960:CDS 45.0%
! TGTCGGAGGAGTTTGAGATT+GGG + chr4_4:57350086-57350105 Msa0689960:CDS 45.0%
! GAAACGCAAGTTGAGAAGGA+AGG + chr4_4:57350145-57350164 Msa0689960:CDS 45.0%
GATTAAGAAGTTGCCGTCGA+CGG + chr4_4:57350261-57350280 Msa0689960:CDS 45.0%
! TGTTTGGTTCCTGCTCCTAA+AGG + chr4_4:57350337-57350356 Msa0689960:CDS 45.0%
GTTATCGTGCTCCAATTCCA+TGG + chr4_4:57350359-57350378 Msa0689960:CDS 45.0%
CGACGCCACATTACATTTCA+TGG + chr4_4:57350723-57350742 Msa0689960:intron 45.0%
! GTTGCTCTTGATGTTGGTTG+TGG + chr4_4:57350943-57350962 Msa0689960:CDS 45.0%
!!! GGTTGTGGTGTTGCTAGTTT+TGG + chr4_4:57350958-57350977 Msa0689960:CDS 45.0%
TTGGTGCGTACTTACTGCAA+CGG + chr4_4:57350977-57350996 Msa0689960:CDS 45.0%
! ATTCAGTTTGCTCTTGAGCG+TGG + chr4_4:57351048-57351067 Msa0689960:CDS 45.0%
! TTCAGTTTGCTCTTGAGCGT+GGG + chr4_4:57351049-57351068 Msa0689960:CDS 45.0%
AATAGGATGCTTAGAGCAGG+AGG + chr4_4:57351327-57351346 Msa0689960:CDS 45.0%
ATAGGATGCTTAGAGCAGGA+GGG + chr4_4:57351328-57351347 Msa0689960:CDS 45.0%
!!! GAGCAGGAGGGTATTTTGTT+TGG + chr4_4:57351340-57351359 Msa0689960:CDS 45.0%
! TGCTATTTAAACCGTGAGGC+AGG + chr4_4:57351917-57351936 Msa0689960:CDS 45.0%
TCATCACTTGGGTCACATAG+AGG - chr4_4:57351953-57351972 None:intergenic 45.0%
GTTTGCAAACCCCACCTAAT+AGG + chr4_4:57352479-57352498 Msa0689960:CDS 45.0%
CTTATGTTCGTGCTTTGCAC+TGG + chr4_4:57352587-57352606 Msa0689960:CDS 45.0%
AATGTTATGGACATGCGAGC+AGG + chr4_4:57352628-57352647 Msa0689960:CDS 45.0%
ACGGTCATATATGACAGGCA+AGG - chr4_4:57352857-57352876 None:intergenic 45.0%
TTGCCTGTCATATATGACCG+TGG + chr4_4:57352856-57352875 Msa0689960:CDS 45.0%
GTTCTCGGATAGGTGTCAAA+TGG - chr4_4:57353031-57353050 None:intergenic 45.0%
TGCTGCATGCAGGAAATCAT+AGG - chr4_4:57353053-57353072 None:intergenic 45.0%
! TTTTCCTCTCAACAGAGAGC+AGG - chr4_4:57353078-57353097 None:intergenic 45.0%
TGCTCTCTGTTGAGAGGAAA+AGG + chr4_4:57353077-57353096 Msa0689960:CDS 45.0%
CCAGGCAGTTAAGGAGATAA+TGG - chr4_4:57353127-57353146 None:intergenic 45.0%
CCATTATCTCCTTAACTGCC+TGG + chr4_4:57353124-57353143 Msa0689960:intron 45.0%
CATGAAATCCCAGGCAGTTA+AGG - chr4_4:57353136-57353155 None:intergenic 45.0%
GTAGGGGACAATAGTTTGAC+AGG + chr4_4:57353200-57353219 Msa0689960:intron 45.0%
ATGGATCGGATACTAAGACC+TGG + chr4_4:57353512-57353531 Msa0689960:CDS 45.0%
CCGTGATTCTCTTGCCATAA+TGG + chr4_4:57353550-57353569 Msa0689960:CDS 45.0%
AGATTGCCAAAGCAATAGGC+TGG + chr4_4:57353585-57353604 Msa0689960:CDS 45.0%
ATTGTTCACTGCCTCTTGTG+AGG - chr4_4:57353813-57353832 None:intergenic 45.0%
!! ATAGCAGGTATTGGACTACG+TGG - chr4_4:57353995-57354014 None:intergenic 45.0%
!! TATTATAAATAAACATTATA+GGG - chr4_4:57351575-57351594 None:intergenic 5.0%
!! TTATTATAAATAAACATTAT+AGG - chr4_4:57351576-57351595 None:intergenic 5.0%
CTTCACACAAAACTCCGACC+CGG + chr4_4:57349865-57349884 Msa0689960:CDS 50.0%
ATTGTGATTGGGATCCGGGT+CGG - chr4_4:57349882-57349901 None:intergenic 50.0%
AATTTCTCCACCGAATCCGC+CGG - chr4_4:57350040-57350059 None:intergenic 50.0%
!! GCGGATTCGGTGGAGAAATT+CGG + chr4_4:57350040-57350059 Msa0689960:CDS 50.0%
!! CGGATTCGGTGGAGAAATTC+GGG + chr4_4:57350041-57350060 Msa0689960:CDS 50.0%
TTCGGGATCGTGAACGAGAA+TGG + chr4_4:57350058-57350077 Msa0689960:CDS 50.0%
CGAGAATGGAACAATGTCGG+AGG + chr4_4:57350072-57350091 Msa0689960:CDS 50.0%
!! ATCCAGCGATGGTGGATGAT+TGG + chr4_4:57350116-57350135 Msa0689960:CDS 50.0%
!! TCCAGCGATGGTGGATGATT+GGG + chr4_4:57350117-57350136 Msa0689960:CDS 50.0%
GAACGGCATTGTCCTGAAGA+TGG + chr4_4:57350301-57350320 Msa0689960:CDS 50.0%
! GCACGATAACCTTTAGGAGC+AGG - chr4_4:57350349-57350368 None:intergenic 50.0%
!! CTGCTTTTGGGCCATGGAAT+TGG - chr4_4:57350373-57350392 None:intergenic 50.0%
!! TCATCTCTGCTTTTGGGCCA+TGG - chr4_4:57350379-57350398 None:intergenic 50.0%
ATGGCCCAAAAGCAGAGATG+AGG + chr4_4:57350378-57350397 Msa0689960:CDS 50.0%
ACACGGCGCAGATGAATACT+TGG + chr4_4:57350629-57350648 Msa0689960:CDS 50.0%
ATCCTTGGGAGCTACAGACA+TGG - chr4_4:57351013-57351032 None:intergenic 50.0%
! TCAGTTTGCTCTTGAGCGTG+GGG + chr4_4:57351050-57351069 Msa0689960:CDS 50.0%
AGTTGCAAATGCTGCCACCA+TGG - chr4_4:57351082-57351101 None:intergenic 50.0%
ATCTTACCACTCGACTCTGC+TGG + chr4_4:57351837-57351856 Msa0689960:CDS 50.0%
AAACTTCCAGCAGAGTCGAG+TGG - chr4_4:57351846-57351865 None:intergenic 50.0%
! GAGGTTTAGTTCCTGCCTCA+CGG - chr4_4:57351931-57351950 None:intergenic 50.0%
TCACTTGGGTCACATAGAGG+AGG - chr4_4:57351950-57351969 None:intergenic 50.0%
! ATGGACATGCGAGCAGGTTT+TGG + chr4_4:57352634-57352653 Msa0689960:CDS 50.0%
!!! ACATGCGAGCAGGTTTTGGA+GGG + chr4_4:57352638-57352657 Msa0689960:CDS 50.0%
! AAGGTGTTTGGACCACTGAC+AGG - chr4_4:57352838-57352857 None:intergenic 50.0%
CATACCTGCTCTCTGTTGAG+AGG + chr4_4:57353071-57353090 Msa0689960:CDS 50.0%
GATCGGATACTAAGACCTGG+TGG + chr4_4:57353515-57353534 Msa0689960:CDS 50.0%
! ATAACTTGCATGAGGCCCCT+CGG - chr4_4:57353633-57353652 None:intergenic 50.0%
AGGGGCCTCATGCAAGTTAT+AGG + chr4_4:57353633-57353652 Msa0689960:CDS 50.0%
GGGGCCTCATGCAAGTTATA+GGG + chr4_4:57353634-57353653 Msa0689960:CDS 50.0%
GCTACGCGCTTGAAACAATG+AGG + chr4_4:57353679-57353698 Msa0689960:exon 50.0%
ACGCGCTTGAAACAATGAGG+TGG + chr4_4:57353682-57353701 Msa0689960:exon 50.0%
GACGTATGCAGCAGCTGTTT+GGG - chr4_4:57353873-57353892 None:intergenic 50.0%
CGGTGGAGGAGGTTGTGTTA+GGG - chr4_4:57349981-57350000 None:intergenic 55.0%
ACGGTGGAGGAGGTTGTGTT+AGG - chr4_4:57349982-57350001 None:intergenic 55.0%
ACCCAATCATCCACCATCGC+TGG - chr4_4:57350121-57350140 None:intergenic 55.0%
AAGTTGCCGTCGACGGAGAA+AGG + chr4_4:57350268-57350287 Msa0689960:CDS 55.0%
CTCTCACCTTTCTCCGTCGA+CGG - chr4_4:57350277-57350296 None:intergenic 55.0%
CACCATGTCTGTAGCTCCCA+AGG + chr4_4:57351008-57351027 Msa0689960:CDS 55.0%
CGCTGTCAGGGTCATCACTT+GGG - chr4_4:57351964-57351983 None:intergenic 55.0%
ACGCTGTCAGGGTCATCACT+TGG - chr4_4:57351965-57351984 None:intergenic 55.0%
GTGATGACCCTGACAGCGTT+TGG + chr4_4:57351966-57351985 Msa0689960:CDS 55.0%
CGCAGGCCAATCGGTAATGT+TGG - chr4_4:57352458-57352477 None:intergenic 55.0%
TTGCAAACGCGCAGGCCAAT+CGG - chr4_4:57352467-57352486 None:intergenic 55.0%
!! GACATGCGAGCAGGTTTTGG+AGG + chr4_4:57352637-57352656 Msa0689960:CDS 55.0%
AGAGCAGGTATGCTGCATGC+AGG - chr4_4:57353063-57353082 None:intergenic 55.0%
CGGATGTATACACGTCCACC+AGG - chr4_4:57353533-57353552 None:intergenic 55.0%
TGCGTGCCAGCCTATTGCTT+TGG - chr4_4:57353594-57353613 None:intergenic 55.0%
GGACGTATGCAGCAGCTGTT+TGG - chr4_4:57353874-57353893 None:intergenic 55.0%
TGGGAGCTTCGATCCAGCGA+TGG + chr4_4:57350105-57350124 Msa0689960:CDS 60.0%
GAGCTTCGATCCAGCGATGG+TGG + chr4_4:57350108-57350127 Msa0689960:CDS 60.0%
TGCTCTTGAGCGTGGGGTAC+CGG + chr4_4:57351056-57351075 Msa0689960:CDS 60.0%
GCAAATGCTGCCACCATGGC+CGG - chr4_4:57351078-57351097 None:intergenic 60.0%
ATCACTCCGTGACACAGCCG+AGG + chr4_4:57353613-57353632 Msa0689960:CDS 60.0%
TCACTCCGTGACACAGCCGA+GGG + chr4_4:57353614-57353633 Msa0689960:CDS 60.0%
TTCTCCACCGAATCCGCCGG+CGG - chr4_4:57350037-57350056 None:intergenic 65.0%
GGTGGGGTTTGCAAACGCGC+AGG - chr4_4:57352475-57352494 None:intergenic 65.0%
CACTCCGTGACACAGCCGAG+GGG + chr4_4:57353615-57353634 Msa0689960:CDS 65.0%
!! GGTGACGGTGGTGGCGGTGA+CGG - chr4_4:57350001-57350020 None:intergenic 70.0%
!! GGTGGTGGTGACGGTGGTGG+CGG - chr4_4:57350007-57350026 None:intergenic 70.0%
!! GGTGGTGGTGGTGACGGTGG+TGG - chr4_4:57350010-57350029 None:intergenic 70.0%
!! GGTGGCGGTGGTGGTGGTGA+CGG - chr4_4:57350016-57350035 None:intergenic 70.0%
!! TGAGCGTGGGGTACCGGCCA+TGG + chr4_4:57351062-57351081 Msa0689960:CDS 70.0%
GAGGCCCCTCGGCTGTGTCA+CGG - chr4_4:57353622-57353641 None:intergenic 70.0%
! GGTGGCGGTGACGGTGGAGG+AGG - chr4_4:57349992-57350011 None:intergenic 75.0%
!! GGTGGTGGCGGTGACGGTGG+AGG - chr4_4:57349995-57350014 None:intergenic 75.0%
!! GACGGTGGTGGCGGTGACGG+TGG - chr4_4:57349998-57350017 None:intergenic 75.0%
!! GGCGGTGGTGGTGGTGACGG+TGG - chr4_4:57350013-57350032 None:intergenic 75.0%
ACCACCACCACCGCCACCGC+CGG + chr4_4:57350018-57350037 Msa0689960:CDS 75.0%
! ACCGCCACCGCCGGCGGATT+CGG + chr4_4:57350027-57350046 Msa0689960:CDS 75.0%
ACCGAATCCGCCGGCGGTGG+CGG - chr4_4:57350031-57350050 None:intergenic 75.0%
TCCACCGAATCCGCCGGCGG+TGG - chr4_4:57350034-57350053 None:intergenic 75.0%
!! GCGTGGGGTACCGGCCATGG+TGG + chr4_4:57351065-57351084 Msa0689960:CDS 75.0%
! ACCACCACCGCCACCGCCGG+CGG + chr4_4:57350021-57350040 Msa0689960:CDS 80.0%
!! GAATCCGCCGGCGGTGGCGG+TGG - chr4_4:57350028-57350047 None:intergenic 80.0%
!! GCCACCGCCGGCGGATTCGG+TGG + chr4_4:57350030-57350049 Msa0689960:CDS 80.0%
!! GCCGGCGGTGGCGGTGGTGG+TGG - chr4_4:57350022-57350041 None:intergenic 85.0%
!! TCCGCCGGCGGTGGCGGTGG+TGG - chr4_4:57350025-57350044 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 57349480 57354063 57349480 ID=Msa0689960;Name=Msa0689960
chr4_4 mRNA 57349480 57354063 57349480 ID=Msa0689960-mRNA-1;Parent=Msa0689960;Name=Msa0689960-mRNA-1;_AED=0.10;_eAED=0.10;_QI=254|1|1|1|1|1|9|372|674
chr4_4 exon 57349480 57350399 57349480 ID=Msa0689960-mRNA-1:exon:15265;Parent=Msa0689960-mRNA-1
chr4_4 exon 57350516 57350665 57350516 ID=Msa0689960-mRNA-1:exon:15266;Parent=Msa0689960-mRNA-1
chr4_4 exon 57350907 57351177 57350907 ID=Msa0689960-mRNA-1:exon:15267;Parent=Msa0689960-mRNA-1
chr4_4 exon 57351304 57351414 57351304 ID=Msa0689960-mRNA-1:exon:15268;Parent=Msa0689960-mRNA-1
chr4_4 exon 57351828 57351987 57351828 ID=Msa0689960-mRNA-1:exon:15269;Parent=Msa0689960-mRNA-1
chr4_4 exon 57352402 57352659 57352402 ID=Msa0689960-mRNA-1:exon:15270;Parent=Msa0689960-mRNA-1
chr4_4 exon 57352780 57352902 57352780 ID=Msa0689960-mRNA-1:exon:15271;Parent=Msa0689960-mRNA-1
chr4_4 exon 57353021 57353098 57353021 ID=Msa0689960-mRNA-1:exon:15272;Parent=Msa0689960-mRNA-1
chr4_4 exon 57353484 57354063 57353484 ID=Msa0689960-mRNA-1:exon:15273;Parent=Msa0689960-mRNA-1
chr4_4 five_prime_UTR 57349480 57349733 57349480 ID=Msa0689960-mRNA-1:five_prime_utr;Parent=Msa0689960-mRNA-1
chr4_4 CDS 57349734 57350399 57349734 ID=Msa0689960-mRNA-1:cds;Parent=Msa0689960-mRNA-1
chr4_4 CDS 57350516 57350665 57350516 ID=Msa0689960-mRNA-1:cds;Parent=Msa0689960-mRNA-1
chr4_4 CDS 57350907 57351177 57350907 ID=Msa0689960-mRNA-1:cds;Parent=Msa0689960-mRNA-1
chr4_4 CDS 57351304 57351414 57351304 ID=Msa0689960-mRNA-1:cds;Parent=Msa0689960-mRNA-1
chr4_4 CDS 57351828 57351987 57351828 ID=Msa0689960-mRNA-1:cds;Parent=Msa0689960-mRNA-1
chr4_4 CDS 57352402 57352659 57352402 ID=Msa0689960-mRNA-1:cds;Parent=Msa0689960-mRNA-1
chr4_4 CDS 57352780 57352902 57352780 ID=Msa0689960-mRNA-1:cds;Parent=Msa0689960-mRNA-1
chr4_4 CDS 57353021 57353098 57353021 ID=Msa0689960-mRNA-1:cds;Parent=Msa0689960-mRNA-1
chr4_4 CDS 57353484 57353691 57353484 ID=Msa0689960-mRNA-1:cds;Parent=Msa0689960-mRNA-1
chr4_4 three_prime_UTR 57353692 57354063 57353692 ID=Msa0689960-mRNA-1:three_prime_utr;Parent=Msa0689960-mRNA-1
Gene Sequence

>Msa0689960

ATGAAATCACCAATCAATGTCGATTTTCTCAAAACAACCAACGCTCTCAAAATCGTTGCTTTCTTCTTCATTTCCTTCACTTTCTTCTACTTAGGTAAACATTGGTCCGATGGATACCAACAACTCATCTTCTTCACACAAAACTCCGACCCGGATCCCAATCACAATCCAAATCAAGCTGTTTCAATTTCCCCTAATTTCAATAAAAACTTCAACCTTTCCGCACTAATCGATCAAGAAAAAACCCTAACACAACCTCCTCCACCGTCACCGCCACCACCGTCACCACCACCACCGCCACCGCCGGCGGATTCGGTGGAGAAATTCGGGATCGTGAACGAGAATGGAACAATGTCGGAGGAGTTTGAGATTGGGAGCTTCGATCCAGCGATGGTGGATGATTGGGTTAACGAAACGCAAGTTGAGAAGGAAGGTTCTGAGAGTGTTACGAAATTTGCGATCAAGAAATTTGGATTGTGTTCACGAGGTATGAGTGAGTATATACCTTGTTTGGATAATGTAGAAGCGATTAAGAAGTTGCCGTCGACGGAGAAAGGTGAGAGATTTGAACGGCATTGTCCTGAAGATGGTAAAAAGTTGAATTGTTTGGTTCCTGCTCCTAAAGGTTATCGTGCTCCAATTCCATGGCCCAAAAGCAGAGATGAGGTATGGTTCAGTAATGTTCCTCATACTCGTCTTGTTGAAGATAAAGGTGGCCAAAACTGGATTTCAAGAGACAAAGATAAGTTTAAATTTCCAGGAGGTGGTACACAATTTATACACGGCGCAGATGAATACTTGGACCATATTTCTAAGATGATTCCTGAAATTACATTTGGTCGGCATATACGAGTTGCTCTTGATGTTGGTTGTGGTGTTGCTAGTTTTGGTGCGTACTTACTGCAACGGAATGTCGTCACCATGTCTGTAGCTCCCAAGGATGTTCATGAGAATCAGATTCAGTTTGCTCTTGAGCGTGGGGTACCGGCCATGGTGGCAGCATTTGCAACTAGACGTTTATTATATCCTAGTCAGGCTTTTGACTTGATACACTGTTCTCGCTGTAGAATTAATTGGACTCGAGATGATGGGATATTGCTGCTTGAAGTTAATAGGATGCTTAGAGCAGGAGGGTATTTTGTTTGGGCTGCCCAACCAGTTTATAAGCACGAAGAAGCTTTAGAAGAACAATGGGAAGAGATGCTTAATCTTACCACTCGACTCTGCTGGAAGTTTTTGAAAAAAGATGGCTACATTGCAGTATGGCAGAAACCTTTTGACAATAGCTGCTATTTAAACCGTGAGGCAGGAACTAAACCTCCTCTATGTGACCCAAGTGATGACCCTGACAGCGTTTGGTATGTTGATCTAAAAGCATGCATCTCTGAATTGCCTAAGAATGAATATGAAGCCAACATTACCGATTGGCCTGCGCGTTTGCAAACCCCACCTAATAGGCTTCAAAGTATAAAAGTTGATGCTTTCATATCCAGAAAAGAGCTTTTTAAGGCAGAATCAAAATACTGGAATGAGATAATAGAAGCTTATGTTCGTGCTTTGCACTGGAAGAAAATAAGATTAAGAAATGTTATGGACATGCGAGCAGGTTTTGGAGGATTTGCAGCAGCATTGATTAAGCAGAAACTTGACAGCTGGGTTATGAATGTTGTTCCTGTCAGTGGTCCAAACACCTTGCCTGTCATATATGACCGTGGATTGATTGGAGTTATGCATGACTGGTGTGAACCATTTGACACCTATCCGAGAACCTATGATTTCCTGCATGCAGCATACCTGCTCTCTGTTGAGAGGAAAAGATGCAATGTGTCATCGATTATGGTTGAGATGGATCGGATACTAAGACCTGGTGGACGTGTATACATCCGTGATTCTCTTGCCATAATGGATGAGCTTCAAGAGATTGCCAAAGCAATAGGCTGGCACGCATCACTCCGTGACACAGCCGAGGGGCCTCATGCAAGTTATAGGGTATTGGTTTGTGATAAGCATCTGCTACGCGCTTGA
Protein sequence

>Msa0689960

MKSPINVDFLKTTNALKIVAFFFISFTFFYLGKHWSDGYQQLIFFTQNSDPDPNHNPNQAVSISPNFNKNFNLSALIDQEKTLTQPPPPSPPPPSPPPPPPPADSVEKFGIVNENGTMSEEFEIGSFDPAMVDDWVNETQVEKEGSESVTKFAIKKFGLCSRGMSEYIPCLDNVEAIKKLPSTEKGERFERHCPEDGKKLNCLVPAPKGYRAPIPWPKSRDEVWFSNVPHTRLVEDKGGQNWISRDKDKFKFPGGGTQFIHGADEYLDHISKMIPEITFGRHIRVALDVGCGVASFGAYLLQRNVVTMSVAPKDVHENQIQFALERGVPAMVAAFATRRLLYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEALEEQWEEMLNLTTRLCWKFLKKDGYIAVWQKPFDNSCYLNREAGTKPPLCDPSDDPDSVWYVDLKACISELPKNEYEANITDWPARLQTPPNRLQSIKVDAFISRKELFKAESKYWNEIIEAYVRALHWKKIRLRNVMDMRAGFGGFAAALIKQKLDSWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDFLHAAYLLSVERKRCNVSSIMVEMDRILRPGGRVYIRDSLAIMDELQEIAKAIGWHASLRDTAEGPHASYRVLVCDKHLLRA*