Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481190 | XP_013458250.1 | 99.866 | 744 | 1 | 0 | 1 | 744 | 1 | 744 | 0.0 | 1541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481190 | sp|Q5ZC88|CUL1_ORYSJ | 83.737 | 744 | 121 | 0 | 1 | 744 | 1 | 744 | 0.0 | 1323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481190 | A0A072USG4 | 99.866 | 744 | 1 | 0 | 1 | 744 | 1 | 744 | 0.0 | 1541 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0189610 | Msa0481190 | 0.805746 | 1.150080e-49 | -8.615850e-47 |
| Msa0224130 | Msa0481190 | 0.806219 | 9.149478e-50 | -8.615850e-47 |
| Msa0481190 | Msa0481280 | 0.835471 | 1.646223e-56 | -8.615850e-47 |
| Msa0481190 | Msa0702370 | 0.830009 | 3.738736e-55 | -8.615850e-47 |
| Msa0481190 | Msa0702550 | 0.810477 | 1.130563e-50 | -8.615850e-47 |
| Msa0481190 | Msa1144040 | 0.848209 | 7.091108e-60 | -8.615850e-47 |
| Msa0481190 | Msa1208370 | 0.815812 | 7.631100e-52 | -8.615850e-47 |
| Msa0265270 | Msa0481190 | 0.806381 | 8.455961e-50 | -8.615850e-47 |
| Msa0319290 | Msa0481190 | 0.800934 | 1.141667e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481190 | MtrunA17_Chr4g0067011 | 99.866 | 744 | 1 | 0 | 1 | 744 | 1 | 744 | 0.0 | 1541 |
| Msa0481190 | MtrunA17_Chr2g0296381 | 93.127 | 742 | 51 | 0 | 3 | 744 | 1 | 742 | 0.0 | 1438 |
| Msa0481190 | MtrunA17_Chr7g0268881 | 86.118 | 389 | 54 | 0 | 356 | 744 | 1 | 389 | 0.0 | 712 |
| Msa0481190 | MtrunA17_Chr7g0268891 | 71.598 | 338 | 94 | 1 | 5 | 342 | 2 | 337 | 2.32e-179 | 516 |
| Msa0481190 | MtrunA17_Chr8g0361901 | 34.133 | 709 | 430 | 12 | 45 | 744 | 51 | 731 | 1.38e-129 | 402 |
| Msa0481190 | MtrunA17_Chr6g0453061 | 33.378 | 746 | 446 | 14 | 12 | 744 | 23 | 730 | 1.98e-125 | 391 |
| Msa0481190 | MtrunA17_Chr5g0416711 | 33.604 | 738 | 437 | 15 | 34 | 744 | 21 | 732 | 9.02e-120 | 376 |
| Msa0481190 | MtrunA17_Chr2g0285881 | 33.427 | 715 | 428 | 14 | 41 | 744 | 115 | 792 | 1.27e-119 | 377 |
| Msa0481190 | MtrunA17_Chr1g0166181 | 35.000 | 660 | 399 | 10 | 94 | 744 | 101 | 739 | 4.08e-119 | 375 |
| Msa0481190 | MtrunA17_Chr6g0453081 | 32.172 | 746 | 455 | 14 | 12 | 744 | 23 | 730 | 1.14e-118 | 373 |
| Msa0481190 | MtrunA17_Chr1g0166131 | 33.939 | 660 | 406 | 10 | 94 | 744 | 102 | 740 | 3.24e-114 | 362 |
| Msa0481190 | MtrunA17_Chr7g0231701 | 32.831 | 664 | 395 | 13 | 94 | 744 | 83 | 708 | 5.15e-106 | 339 |
| Msa0481190 | MtrunA17_Chr1g0166141 | 34.477 | 612 | 372 | 9 | 141 | 744 | 84 | 674 | 1.36e-103 | 332 |
| Msa0481190 | MtrunA17_Chr7g0231741 | 40.576 | 382 | 211 | 7 | 371 | 744 | 2 | 375 | 2.50e-79 | 258 |
| Msa0481190 | MtrunA17_Chr4g0067071 | 56.000 | 200 | 88 | 0 | 9 | 208 | 5 | 204 | 9.06e-72 | 233 |
| Msa0481190 | MtrunA17_Chr4g0067051 | 55.392 | 204 | 87 | 2 | 7 | 208 | 3 | 204 | 2.96e-69 | 226 |
| Msa0481190 | MtrunA17_Chr5g0416691 | 36.983 | 411 | 239 | 10 | 343 | 744 | 2 | 401 | 1.28e-65 | 223 |
| Msa0481190 | MtrunA17_Chr7g0231791 | 36.983 | 411 | 239 | 10 | 343 | 744 | 2 | 401 | 1.16e-63 | 218 |
| Msa0481190 | MtrunA17_Chr4g0067031 | 51.528 | 229 | 102 | 4 | 2 | 224 | 3 | 228 | 1.28e-63 | 217 |
| Msa0481190 | MtrunA17_Chr4g0067381 | 53.365 | 208 | 94 | 1 | 1 | 208 | 1 | 205 | 3.31e-63 | 209 |
| Msa0481190 | MtrunA17_Chr5g0416831 | 34.557 | 327 | 167 | 7 | 425 | 744 | 3 | 289 | 6.31e-48 | 171 |
| Msa0481190 | MtrunA17_Chr5g0416731 | 25.346 | 434 | 278 | 11 | 46 | 445 | 25 | 446 | 1.80e-37 | 146 |
| Msa0481190 | MtrunA17_Chr7g0231721 | 25.000 | 340 | 233 | 7 | 50 | 387 | 29 | 348 | 2.98e-33 | 131 |
| Msa0481190 | MtrunA17_Chr5g0416901 | 26.347 | 334 | 213 | 7 | 61 | 382 | 23 | 335 | 6.65e-32 | 127 |
| Msa0481190 | MtrunA17_Chr7g0231581 | 26.645 | 304 | 198 | 6 | 84 | 382 | 28 | 311 | 9.43e-32 | 126 |
| Msa0481190 | MtrunA17_Chr7g0231751 | 27.891 | 294 | 186 | 7 | 34 | 307 | 21 | 308 | 3.73e-29 | 118 |
| Msa0481190 | MtrunA17_Chr4g0074661 | 60.674 | 89 | 34 | 1 | 3 | 91 | 1 | 88 | 9.97e-29 | 110 |
| Msa0481190 | MtrunA17_Chr7g0231571 | 29.358 | 218 | 148 | 4 | 84 | 299 | 28 | 241 | 7.39e-27 | 110 |
| Msa0481190 | MtrunA17_Chr5g0416911 | 28.899 | 218 | 149 | 4 | 84 | 299 | 36 | 249 | 9.94e-27 | 110 |
| Msa0481190 | MtrunA17_Chr5g0416681 | 25.571 | 219 | 157 | 2 | 91 | 306 | 36 | 251 | 9.97e-20 | 89.7 |
| Msa0481190 | MtrunA17_Chr7g0231801 | 25.571 | 219 | 157 | 2 | 91 | 306 | 36 | 251 | 1.26e-19 | 89.4 |
| Msa0481190 | MtrunA17_Chr4g0068101 | 50.000 | 92 | 46 | 0 | 77 | 168 | 14 | 105 | 1.19e-16 | 76.3 |
| Msa0481190 | MtrunA17_Chr4g0042591 | 26.923 | 182 | 123 | 2 | 425 | 598 | 553 | 732 | 6.67e-12 | 69.3 |
| Msa0481190 | MtrunA17_Chr1g0166151 | 23.810 | 168 | 122 | 4 | 94 | 259 | 14 | 177 | 9.46e-12 | 64.7 |
| Msa0481190 | MtrunA17_Chr2g0285291 | 74.359 | 39 | 10 | 0 | 620 | 658 | 30 | 68 | 1.88e-11 | 60.8 |
| Msa0481190 | MtrunA17_Chr4g0042651 | 26.923 | 182 | 123 | 2 | 425 | 598 | 553 | 732 | 2.19e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481190 | AT4G02570.4 | 81.757 | 740 | 132 | 1 | 5 | 744 | 2 | 738 | 0.0 | 1295 |
| Msa0481190 | AT4G02570.2 | 81.757 | 740 | 132 | 1 | 5 | 744 | 2 | 738 | 0.0 | 1295 |
| Msa0481190 | AT4G02570.1 | 81.757 | 740 | 132 | 1 | 5 | 744 | 2 | 738 | 0.0 | 1295 |
| Msa0481190 | AT4G02570.3 | 81.757 | 740 | 132 | 1 | 5 | 744 | 2 | 738 | 0.0 | 1295 |
| Msa0481190 | AT1G02980.1 | 66.801 | 744 | 243 | 4 | 3 | 744 | 1 | 742 | 0.0 | 1052 |
| Msa0481190 | AT1G02980.2 | 66.801 | 744 | 243 | 4 | 3 | 744 | 1 | 742 | 0.0 | 1052 |
| Msa0481190 | AT1G43140.1 | 65.946 | 740 | 221 | 3 | 6 | 744 | 12 | 721 | 0.0 | 1011 |
| Msa0481190 | AT1G59790.2 | 56.771 | 384 | 145 | 3 | 3 | 384 | 6 | 370 | 2.62e-152 | 448 |
| Msa0481190 | AT1G59790.1 | 56.720 | 372 | 140 | 3 | 3 | 372 | 6 | 358 | 8.76e-147 | 434 |
| Msa0481190 | AT1G26830.1 | 34.713 | 749 | 431 | 14 | 12 | 744 | 26 | 732 | 9.39e-135 | 416 |
| Msa0481190 | AT1G69670.1 | 34.274 | 709 | 429 | 13 | 45 | 744 | 52 | 732 | 4.05e-129 | 401 |
| Msa0481190 | AT1G69670.2 | 34.274 | 709 | 429 | 13 | 45 | 744 | 52 | 732 | 4.05e-129 | 401 |
| Msa0481190 | AT5G46210.1 | 34.637 | 716 | 418 | 17 | 41 | 744 | 115 | 792 | 6.02e-112 | 358 |
| Msa0481190 | AT1G59800.1 | 54.918 | 244 | 106 | 1 | 9 | 252 | 7 | 246 | 4.09e-89 | 280 |
Find 165 sgRNAs with CRISPR-Local
Find 531 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTCTGACCACTGGTTTC+TGG | 0.096559 | 3_3:+86995699 | Msa0481190:CDS |
| TTCTCGTTTCTTTCACTATT+TGG | 0.127323 | 3_3:+86991857 | Msa0481190:CDS |
| GCTAAGTACTTGAACATATT+TGG | 0.130944 | 3_3:-86996830 | None:intergenic |
| TTAGATATATTTGTTGAAAT+TGG | 0.149900 | 3_3:+86992320 | Msa0481190:CDS |
| AATGACTCAGTTAAACTTAT+TGG | 0.163771 | 3_3:+86996202 | Msa0481190:CDS |
| CATGTAGCTCAATCACTTTC+CGG | 0.271035 | 3_3:-86993779 | None:intergenic |
| TGAAATTGGAATGGGGAAAA+TGG | 0.276258 | 3_3:+86992334 | Msa0481190:CDS |
| TATGAAGAGTCGGAAAGTTT+TGG | 0.279840 | 3_3:+86996577 | Msa0481190:CDS |
| TAAAATCCCATCCTTGTTCT+AGG | 0.294855 | 3_3:-86989573 | None:intergenic |
| AAACTTCCCACTTATGTTAC+AGG | 0.307020 | 3_3:-86995948 | None:intergenic |
| ATTCTCGAAAGGCTTCAAAT+TGG | 0.308428 | 3_3:+86992411 | Msa0481190:CDS |
| TGTGGAAAAGAGTGTGATTC+TGG | 0.331752 | 3_3:-86993833 | None:intergenic |
| AATCAGGACAAGAATCTTCT+AGG | 0.335743 | 3_3:-86992436 | None:intergenic |
| TAGTGAGCCAAAGTTATTAG+AGG | 0.338740 | 3_3:+86992612 | Msa0481190:CDS |
| GCTTAAGACGGGAGAAAGAT+AGG | 0.347462 | 3_3:+86992566 | Msa0481190:CDS |
| GCAGTTGGGTCGCATGTTTA+AGG | 0.348970 | 3_3:+86996631 | Msa0481190:CDS |
| GACCATTCCTTCCATCTTTG+AGG | 0.353692 | 3_3:-86995475 | None:intergenic |
| CTCGCGATTCAACTCATTCA+AGG | 0.365680 | 3_3:+86989320 | Msa0481190:five_prime_UTR |
| GTAACTGTTAAGTCTATTCC+AGG | 0.375194 | 3_3:-86995677 | None:intergenic |
| TTTGATTTCTCGGGATTACT+TGG | 0.380388 | 3_3:+86996790 | Msa0481190:CDS |
| ACTTACATGGATTTACTCCT+TGG | 0.389503 | 3_3:+86995922 | Msa0481190:CDS |
| TACAGCATCATGTAATCTTC+AGG | 0.394192 | 3_3:-86989658 | None:intergenic |
| GTTGGCTTGCTTCCGTGATT+TGG | 0.395108 | 3_3:+86991929 | Msa0481190:CDS |
| TCTTTCTCCTTCTTCAACCT+AGG | 0.395593 | 3_3:+86989285 | Msa0481190:five_prime_UTR |
| AGTACTGTTATTTGTAGCTT+CGG | 0.399723 | 3_3:+86997152 | Msa0481190:three_prime_UTR |
| CTTCCACCTCTTAATGAAGT+TGG | 0.401442 | 3_3:+86991906 | Msa0481190:CDS |
| TTCCACCTCTTAATGAAGTT+GGG | 0.402385 | 3_3:+86991907 | Msa0481190:CDS |
| TGCTTTACTTAGAGATGATA+AGG | 0.405401 | 3_3:+86992899 | Msa0481190:CDS |
| AAGACTTGTCAAGGATGTTC+AGG | 0.408359 | 3_3:+86993016 | Msa0481190:CDS |
| TGTGATAACATTCTTAAGAA+AGG | 0.408911 | 3_3:+86994015 | Msa0481190:CDS |
| TTCTAAAATACCCCGTGGCT+TGG | 0.411928 | 3_3:+86993044 | Msa0481190:CDS |
| ATTGAGTTGTTCCAGCTCAT+TGG | 0.413327 | 3_3:+86997030 | Msa0481190:three_prime_UTR |
| ATATTTGTTGAAATTGGAAT+GGG | 0.416286 | 3_3:+86992326 | Msa0481190:CDS |
| CTTTCTCCTTCTTCAACCTA+GGG | 0.419164 | 3_3:+86989286 | Msa0481190:five_prime_UTR |
| CTTTATATAACGCGAGAGTA+TGG | 0.419294 | 3_3:+86997342 | Msa0481190:three_prime_UTR |
| TCTATTCCAGGGTCTGCATT+AGG | 0.419807 | 3_3:-86995665 | None:intergenic |
| TCTCAATCTTCCTGCAGAAA+TGG | 0.424664 | 3_3:+86995742 | Msa0481190:CDS |
| TATTGGATGAAGATGTCATT+AGG | 0.425424 | 3_3:+86996219 | Msa0481190:CDS |
| ACCTCTTAATGAAGTTGGGT+TGG | 0.429517 | 3_3:+86991911 | Msa0481190:CDS |
| AGATGCAGCTAGTAACAAAA+AGG | 0.437346 | 3_3:+86993267 | Msa0481190:CDS |
| AAGCTCAAGAACATTCTTGA+AGG | 0.438292 | 3_3:+86989613 | Msa0481190:CDS |
| CAGGTTTACAAGGAACTACA+TGG | 0.439895 | 3_3:+86992131 | Msa0481190:intron |
| GGGCTATCAACAGTTAGTTA+TGG | 0.441591 | 3_3:+86996598 | Msa0481190:CDS |
| AAGAGTGTGATTCTGGAAAC+AGG | 0.442171 | 3_3:-86993826 | None:intergenic |
| ACTTGTTTGCCGAGTTCTAC+AGG | 0.445269 | 3_3:+86994260 | Msa0481190:CDS |
| AGATCAAAAGATTTATAACT+AGG | 0.445948 | 3_3:-86995722 | None:intergenic |
| TGCTTAAATATACTAGAAAC+AGG | 0.455563 | 3_3:-86993069 | None:intergenic |
| GAACAAACCTCTAATAACTT+TGG | 0.461535 | 3_3:-86992619 | None:intergenic |
| TTCTCATCCACAGGAGGTAG+AGG | 0.465842 | 3_3:-86996488 | None:intergenic |
| TATGGAGTGCGTTGAGCAGT+TGG | 0.466660 | 3_3:+86996616 | Msa0481190:CDS |
| GATTGAAGATTTGATTTCTC+GGG | 0.468239 | 3_3:+86996781 | Msa0481190:CDS |
| ATGTCTACAGGCAGAGAAAA+GGG | 0.468308 | 3_3:+86993650 | Msa0481190:intron |
| CTTACATGGATTTACTCCTT+GGG | 0.469426 | 3_3:+86995923 | Msa0481190:CDS |
| GCCAACCCAACTTCATTAAG+AGG | 0.469591 | 3_3:-86991912 | None:intergenic |
| TATATTTGTTGAAATTGGAA+TGG | 0.470308 | 3_3:+86992325 | Msa0481190:CDS |
| CTTAGAAATCACCAGGTGAA+TGG | 0.475673 | 3_3:+86997198 | Msa0481190:three_prime_UTR |
| ATTAAATTCAAAATAATCAG+TGG | 0.477551 | 3_3:-86996312 | None:intergenic |
| ATCCAGATTACCATTTCTGC+AGG | 0.478678 | 3_3:-86995752 | None:intergenic |
| TGTTTCTAGTATATTTAAGC+AGG | 0.479126 | 3_3:+86993071 | Msa0481190:CDS |
| AATGTCTACAGGCAGAGAAA+AGG | 0.480638 | 3_3:+86993649 | Msa0481190:intron |
| CATACCTTGAGCATATAATC+AGG | 0.483000 | 3_3:-86992452 | None:intergenic |
| TAAGAGGTGGAAGTGACCTC+CGG | 0.485058 | 3_3:-86991896 | None:intergenic |
| GCGCACAATTGAGGCATCAA+TGG | 0.485374 | 3_3:-86996552 | None:intergenic |
| AAAGTATAAGATTCTTATCA+AGG | 0.493353 | 3_3:+86996265 | Msa0481190:CDS |
| TCAGGACTGAATTGAGGCTC+AGG | 0.498314 | 3_3:-86989640 | None:intergenic |
| GGATTGAAGATTTGATTTCT+CGG | 0.500636 | 3_3:+86996780 | Msa0481190:CDS |
| TTATTATTTACAGGTTTACA+AGG | 0.507125 | 3_3:+86992121 | Msa0481190:intron |
| AATTGAAGAAACTCTTGAAA+AGG | 0.507211 | 3_3:+86994065 | Msa0481190:CDS |
| GGAGAATCAAACTAGCTTTG+AGG | 0.511793 | 3_3:+86995625 | Msa0481190:CDS |
| TGTGGATGTGTGCTCAAGTT+GGG | 0.512560 | 3_3:+86996992 | Msa0481190:three_prime_UTR |
| ACAGTTACAGTTCTGACCAC+TGG | 0.512956 | 3_3:+86995692 | Msa0481190:CDS |
| TATCAGCATGTTACCACTGA+AGG | 0.513329 | 3_3:+86993220 | Msa0481190:intron |
| AGCGGCTGAGAATAGTCATT+AGG | 0.516656 | 3_3:-86989834 | None:intergenic |
| TACGAGAACTTGTAAAGAGA+TGG | 0.518043 | 3_3:+86991805 | Msa0481190:CDS |
| CTTCATAATGCGCACAATTG+AGG | 0.520124 | 3_3:-86996561 | None:intergenic |
| TTCTGCTTATTATTCTCGAA+AGG | 0.520286 | 3_3:+86992400 | Msa0481190:CDS |
| TATTGTTGGTACGCAGGAGC+AGG | 0.520932 | 3_3:+86993674 | Msa0481190:CDS |
| ATGGAGTGCGTTGAGCAGTT+GGG | 0.521583 | 3_3:+86996617 | Msa0481190:CDS |
| GCAGAGAAAAGGGATATTGT+TGG | 0.521890 | 3_3:+86993660 | Msa0481190:CDS |
| TCAGGAAGAAGCTTGCTCGC+AGG | 0.522136 | 3_3:+86995370 | Msa0481190:intron |
| GATCATATAGGCTCTTAAAG+AGG | 0.526409 | 3_3:+86993927 | Msa0481190:intron |
| CAAAGTTCACTGACAAAATG+AGG | 0.526696 | 3_3:+86996336 | Msa0481190:CDS |
| CAAAGCACAGAAAACTTACA+TGG | 0.526940 | 3_3:+86995909 | Msa0481190:CDS |
| TGGACCGCTACTTCATTGCC+CGG | 0.528357 | 3_3:+86991877 | Msa0481190:CDS |
| CTCCTCTTTCGAGAAAACTA+AGG | 0.529162 | 3_3:-86996949 | None:intergenic |
| TTGGGTACCTGTAACATAAG+TGG | 0.530949 | 3_3:+86995941 | Msa0481190:CDS |
| TACAGATTTGACGCTGGCAA+AGG | 0.535172 | 3_3:+86995604 | Msa0481190:CDS |
| AGTTGAATCGCGAGAATGAA+GGG | 0.536510 | 3_3:-86989311 | None:intergenic |
| AATGAGCTGGAACAACTCAA+TGG | 0.540938 | 3_3:-86997028 | None:intergenic |
| AAATTATGTCTGTGTCTGAC+TGG | 0.541030 | 3_3:+86997313 | Msa0481190:three_prime_UTR |
| GCTTGTTGTCACAACCTACC+AGG | 0.542445 | 3_3:+86995988 | Msa0481190:CDS |
| TTGTCCTGATTATATGCTCA+AGG | 0.542877 | 3_3:+86992448 | Msa0481190:CDS |
| GGCTGAGGAGTGCTTAAGAC+GGG | 0.543587 | 3_3:+86992555 | Msa0481190:intron |
| TGGTGAGGGTACCAATGAGC+TGG | 0.543682 | 3_3:-86997041 | None:intergenic |
| CTATAGACCTAGAACAAGGA+TGG | 0.545135 | 3_3:+86989566 | Msa0481190:CDS |
| ATCCCGAGTGCTCTTTCTCA+AGG | 0.548621 | 3_3:-86992872 | None:intergenic |
| GCAACATGTCAATGAGTGAA+AGG | 0.550034 | 3_3:+86989539 | Msa0481190:exon |
| TACCTCAAAGATGGAAGGAA+TGG | 0.555295 | 3_3:+86995473 | Msa0481190:CDS |
| AATGTAACACGAGCATTGAT+CGG | 0.555523 | 3_3:-86989261 | None:intergenic |
| GCTCCTTGAGAAAGAGCACT+CGG | 0.563609 | 3_3:+86992869 | Msa0481190:CDS |
| GCATGTTACCACTGAAGGCA+TGG | 0.566747 | 3_3:+86993225 | Msa0481190:intron |
| GTAGATTCCTCTACCTCCTG+TGG | 0.567732 | 3_3:+86996481 | Msa0481190:intron |
| TGACAAAATGAGGAGGATCA+AGG | 0.568312 | 3_3:+86996346 | Msa0481190:CDS |
| GAGTTGAATCGCGAGAATGA+AGG | 0.569485 | 3_3:-86989312 | None:intergenic |
| TGGACAGTTTACCTCAAAGA+TGG | 0.570096 | 3_3:+86995464 | Msa0481190:CDS |
| TTGTGGATGTGTGCTCAAGT+TGG | 0.572064 | 3_3:+86996991 | Msa0481190:three_prime_UTR |
| ACTTTGCACATGACAAAGAG+TGG | 0.575661 | 3_3:-86996247 | None:intergenic |
| TGAAGAGTACATCGTGTCAA+CGG | 0.578165 | 3_3:+86989881 | Msa0481190:CDS |
| AGGGAACCCTAGGTTGAAGA+AGG | 0.578685 | 3_3:-86989292 | None:intergenic |
| ACGAGAACTTGTAAAGAGAT+GGG | 0.578748 | 3_3:+86991806 | Msa0481190:CDS |
| GCAAATGTAGATTACTGTTG+TGG | 0.579359 | 3_3:+86996974 | Msa0481190:three_prime_UTR |
| AAGAGGTGGAAGTGACCTCC+GGG | 0.579880 | 3_3:-86991895 | None:intergenic |
| AACAGGAGTTCACATATGCC+AGG | 0.580301 | 3_3:-86993809 | None:intergenic |
| TAATCTTCAGGACTGAATTG+AGG | 0.582140 | 3_3:-86989646 | None:intergenic |
| CTTCAAAATCATTCTCATAG+TGG | 0.584709 | 3_3:-86992358 | None:intergenic |
| CTTAAGACGGGAGAAAGATA+GGG | 0.586296 | 3_3:+86992567 | Msa0481190:CDS |
| AAGGGATATTGTTGGTACGC+AGG | 0.588845 | 3_3:+86993668 | Msa0481190:CDS |
| TATTTGTTGAAATTGGAATG+GGG | 0.591338 | 3_3:+86992327 | Msa0481190:CDS |
| TTATCAGCTTAGAAATCACC+AGG | 0.592043 | 3_3:+86997191 | Msa0481190:three_prime_UTR |
| ATGGGCGAACCATAAAATCA+TGG | 0.592502 | 3_3:+86991824 | Msa0481190:CDS |
| TGGGTACCTGTAACATAAGT+GGG | 0.595127 | 3_3:+86995942 | Msa0481190:CDS |
| TTGGCTCACTACTAGAGTGC+AGG | 0.595754 | 3_3:-86992600 | None:intergenic |
| GCAGCAAATAAGCTATGAGA+TGG | 0.597059 | 3_3:-86997091 | None:intergenic |
| CTCCTTGAGAAAGAGCACTC+GGG | 0.598786 | 3_3:+86992870 | Msa0481190:CDS |
| TTAAATTCAAAATAATCAGT+GGG | 0.599039 | 3_3:-86996311 | None:intergenic |
| TATAGACCTAGAACAAGGAT+GGG | 0.601596 | 3_3:+86989567 | Msa0481190:CDS |
| AGAAACAGGATCCAAGCCAC+GGG | 0.607688 | 3_3:-86993055 | None:intergenic |
| AAAGATTGATCAAGAACGCG+AGG | 0.608317 | 3_3:+86992262 | Msa0481190:intron |
| GCGAGAATGAAGGGAACCCT+AGG | 0.609584 | 3_3:-86989302 | None:intergenic |
| CACCAACGCCATGCCTTCAG+TGG | 0.612973 | 3_3:-86993233 | None:intergenic |
| GGCTGAGAATAGTCATTAGG+AGG | 0.613345 | 3_3:-86989831 | None:intergenic |
| AGGCTGAGGAGTGCTTAAGA+CGG | 0.615169 | 3_3:+86992554 | Msa0481190:intron |
| ACCATAAAATCATGGTGAGG+TGG | 0.616474 | 3_3:+86991832 | Msa0481190:CDS |
| ACTGTAACATTACCAAATCA+CGG | 0.617141 | 3_3:-86991941 | None:intergenic |
| TCCTTGTACTTGTCATACAG+CGG | 0.620605 | 3_3:-86989852 | None:intergenic |
| GGTAAGTGATATAACCTGGT+AGG | 0.620880 | 3_3:-86996002 | None:intergenic |
| CAGTTTACCTCAAAGATGGA+AGG | 0.621254 | 3_3:+86995468 | Msa0481190:CDS |
| TAGAAACAGGATCCAAGCCA+CGG | 0.624942 | 3_3:-86993056 | None:intergenic |
| GATAACATTCTTAAGAAAGG+AGG | 0.627547 | 3_3:+86994018 | Msa0481190:CDS |
| AATACTCCTAATGCAGACCC+TGG | 0.628370 | 3_3:+86995659 | Msa0481190:CDS |
| TTCAGTGTGAAGACTTGTCA+AGG | 0.628529 | 3_3:+86993007 | Msa0481190:intron |
| TTGTGCGCATTATGAAGAGT+CGG | 0.630462 | 3_3:+86996567 | Msa0481190:CDS |
| GCCGCTGTATGACAAGTACA+AGG | 0.634517 | 3_3:+86989851 | Msa0481190:CDS |
| AGAATAACTCAGTCTATCAG+AGG | 0.636581 | 3_3:-86996174 | None:intergenic |
| ACTTATGTTACAGGTACCCA+AGG | 0.636697 | 3_3:-86995939 | None:intergenic |
| ACCTCCGGGCAATGAAGTAG+CGG | 0.640019 | 3_3:-86991881 | None:intergenic |
| AACCCAACTTCATTAAGAGG+TGG | 0.641652 | 3_3:-86991909 | None:intergenic |
| AAATTGAAGCAACAGTGTGG+TGG | 0.641731 | 3_3:+86995444 | Msa0481190:CDS |
| TGAGCTACATGACAAGTACC+TGG | 0.651511 | 3_3:+86993791 | Msa0481190:CDS |
| AGAAGACATATCCATTCACC+TGG | 0.652473 | 3_3:-86997209 | None:intergenic |
| TACCACTGAAGGCATGGCGT+TGG | 0.656008 | 3_3:+86993231 | Msa0481190:CDS |
| AAGATTGATCAAGAACGCGA+GGG | 0.661144 | 3_3:+86992263 | Msa0481190:intron |
| AGTTCACTGACAAAATGAGG+AGG | 0.668852 | 3_3:+86996339 | Msa0481190:CDS |
| GTTGCAACTAGCAAAACAAG+AGG | 0.677844 | 3_3:+86996889 | Msa0481190:three_prime_UTR |
| CCAGGTTACAGATTTGACGC+TGG | 0.681048 | 3_3:+86995598 | Msa0481190:intron |
| AGGTTTACAAGGAACTACAT+GGG | 0.683050 | 3_3:+86992132 | Msa0481190:intron |
| GCTCGCTTATATTAGTGACA+AGG | 0.684698 | 3_3:+86994237 | Msa0481190:CDS |
| TAACTGTTAAGTCTATTCCA+GGG | 0.696441 | 3_3:-86995676 | None:intergenic |
| ACCGCTACTTCATTGCCCGG+AGG | 0.702395 | 3_3:+86991880 | Msa0481190:CDS |
| ACAAAATTGAAGCAACAGTG+TGG | 0.705779 | 3_3:+86995441 | Msa0481190:CDS |
| AAAACTATAGACCTAGAACA+AGG | 0.706435 | 3_3:+86989562 | Msa0481190:CDS |
| CGAACCATAAAATCATGGTG+AGG | 0.707704 | 3_3:+86991829 | Msa0481190:CDS |
| ATAACTAGGCCAGAAACCAG+TGG | 0.715997 | 3_3:-86995708 | None:intergenic |
| ATATGATTGAGCAAATGAAG+TGG | 0.720199 | 3_3:+86996864 | Msa0481190:three_prime_UTR |
| GAAACAGGATCCAAGCCACG+GGG | 0.759466 | 3_3:-86993054 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAATGTAATATAATT+AGG | - | chr3_3:86991402-86991421 | None:intergenic | 10.0% |
| !! | GTATTTATTACTTAATTTAT+TGG | - | chr3_3:86991428-86991447 | None:intergenic | 10.0% |
| !!! | AATCTTTTTGAATAAAAAAA+AGG | - | chr3_3:86992249-86992268 | None:intergenic | 10.0% |
| !!! | ATTTTTTACAAAACAAATAA+AGG | + | chr3_3:86993426-86993445 | Msa0481190:intron | 10.0% |
| !! | AATTAGAAAGAAATTGAATT+GGG | - | chr3_3:86989419-86989438 | None:intergenic | 15.0% |
| !! | ATAACAAAGAATTAATGAAA+AGG | - | chr3_3:86989463-86989482 | None:intergenic | 15.0% |
| !!! | TTTTTTCAAATTTTTACCAA+CGG | - | chr3_3:86990012-86990031 | None:intergenic | 15.0% |
| !! | CCAATAATAATTTGATAAAA+TGG | - | chr3_3:86990788-86990807 | None:intergenic | 15.0% |
| !!! | CCATTTTATCAAATTATTAT+TGG | + | chr3_3:86990785-86990804 | Msa0481190:intron | 15.0% |
| !! | ATTAAAAAACTACTTGTTTA+AGG | + | chr3_3:86991010-86991029 | Msa0481190:intron | 15.0% |
| !! | TTAAAAAACTACTTGTTTAA+GGG | + | chr3_3:86991011-86991030 | Msa0481190:intron | 15.0% |
| !! | TAATATAATTAGGGATATTT+CGG | - | chr3_3:86991392-86991411 | None:intergenic | 15.0% |
| !! | TTGTTTATTGCATTTAATAT+AGG | + | chr3_3:86992007-86992026 | Msa0481190:intron | 15.0% |
| !! | TTCATTATAGAATATATTGA+CGG | + | chr3_3:86992095-86992114 | Msa0481190:intron | 15.0% |
| !!! | TATGTTTGTCTTTTTTAATA+TGG | + | chr3_3:86992183-86992202 | Msa0481190:intron | 15.0% |
| !!! | TTTTGAATAAAAAAAAGGAT+TGG | - | chr3_3:86992244-86992263 | None:intergenic | 15.0% |
| !!! | TTAGATATATTTGTTGAAAT+TGG | + | chr3_3:86992320-86992339 | Msa0481190:CDS | 15.0% |
| !!! | TATAATGACTTTTCTTTTTT+TGG | + | chr3_3:86992739-86992758 | Msa0481190:intron | 15.0% |
| !! | AATATATTTGCATTATCAAA+GGG | - | chr3_3:86993131-86993150 | None:intergenic | 15.0% |
| !! | AAATATATTTGCATTATCAA+AGG | - | chr3_3:86993132-86993151 | None:intergenic | 15.0% |
| !! | GTAGACATTATAATATAAAA+GGG | - | chr3_3:86993638-86993657 | None:intergenic | 15.0% |
| !! | TGTAGACATTATAATATAAA+AGG | - | chr3_3:86993639-86993658 | None:intergenic | 15.0% |
| !!! | TTTTATATTATAATGTCTAC+AGG | + | chr3_3:86993638-86993657 | Msa0481190:intron | 15.0% |
| !!! | TATTAATGTCTCTAAAATTA+GGG | - | chr3_3:86994558-86994577 | None:intergenic | 15.0% |
| !!! | ATATTAATGTCTCTAAAATT+AGG | - | chr3_3:86994559-86994578 | None:intergenic | 15.0% |
| !!! | TTTTATATCTCTTAAAATGA+TGG | - | chr3_3:86994748-86994767 | None:intergenic | 15.0% |
| !!! | TATATTGTTATTTAGAGAAT+GGG | - | chr3_3:86995095-86995114 | None:intergenic | 15.0% |
| !! | TAAACTTCAGAAAATATTTA+CGG | - | chr3_3:86995121-86995140 | None:intergenic | 15.0% |
| !! | GGTAAATATTACATAATAAA+TGG | - | chr3_3:86995234-86995253 | None:intergenic | 15.0% |
| !!! | GCTAATTAAACAATTTTATT+TGG | + | chr3_3:86995262-86995281 | Msa0481190:intron | 15.0% |
| !!! | TCTTTTAAAGTATTTGTATA+TGG | + | chr3_3:86995500-86995519 | Msa0481190:intron | 15.0% |
| !! | TTAAATTCAAAATAATCAGT+GGG | - | chr3_3:86996314-86996333 | None:intergenic | 15.0% |
| !! | ATTAAATTCAAAATAATCAG+TGG | - | chr3_3:86996315-86996334 | None:intergenic | 15.0% |
| !!! | ATATTTTCTCTTTATTTACT+TGG | + | chr3_3:86996396-86996415 | Msa0481190:intron | 15.0% |
| !!! | ATATAAATTTTAAGATTCGA+GGG | - | chr3_3:86996718-86996737 | None:intergenic | 15.0% |
| !!! | AATAACAGTACTTTTTTTTT+GGG | - | chr3_3:86997144-86997163 | None:intergenic | 15.0% |
| !!! | AAATAACAGTACTTTTTTTT+TGG | - | chr3_3:86997145-86997164 | None:intergenic | 15.0% |
| !!! | TTAAGATTTTATCAAAGATT+TGG | + | chr3_3:86997289-86997308 | Msa0481190:three_prime_UTR | 15.0% |
| !! | GAATTAGAAAGAAATTGAAT+TGG | - | chr3_3:86989420-86989439 | None:intergenic | 20.0% |
| !!! | TCTTTGTTATCTATCTAATT+TGG | + | chr3_3:86989473-86989492 | Msa0481190:intron | 20.0% |
| !!! | ATCTTTAATTGCAGATTTTT+AGG | + | chr3_3:86989498-86989517 | Msa0481190:intron | 20.0% |
| !!! | TAGTATTGTATTGGTATTAT+TGG | + | chr3_3:86990159-86990178 | Msa0481190:intron | 20.0% |
| !! | ATTTCAAAACATGATTGAAT+GGG | - | chr3_3:86990393-86990412 | None:intergenic | 20.0% |
| !! | TAAAAAACTACTTGTTTAAG+GGG | + | chr3_3:86991012-86991031 | Msa0481190:intron | 20.0% |
| !!! | TACAGTGGAATTTTTTAAAA+GGG | - | chr3_3:86991320-86991339 | None:intergenic | 20.0% |
| !!! | ATACAGTGGAATTTTTTAAA+AGG | - | chr3_3:86991321-86991340 | None:intergenic | 20.0% |
| !! | TAAGTAATAAATACTGTGAA+TGG | + | chr3_3:86991434-86991453 | Msa0481190:intron | 20.0% |
| !! | TCATTATAGAATATATTGAC+GGG | + | chr3_3:86992096-86992115 | Msa0481190:intron | 20.0% |
| !! | TTATTATTTACAGGTTTACA+AGG | + | chr3_3:86992121-86992140 | Msa0481190:intron | 20.0% |
| !!! | TTTGTCTTTTTTAATATGGT+AGG | + | chr3_3:86992187-86992206 | Msa0481190:intron | 20.0% |
| !!! | TATATTTGTTGAAATTGGAA+TGG | + | chr3_3:86992325-86992344 | Msa0481190:CDS | 20.0% |
| !!! | ATATTTGTTGAAATTGGAAT+GGG | + | chr3_3:86992326-86992345 | Msa0481190:CDS | 20.0% |
| !!! | TTTTACAAAACAAATAAAGG+AGG | + | chr3_3:86993429-86993448 | Msa0481190:intron | 20.0% |
| !! | ATATAAAAGGGTGAAAATAA+GGG | - | chr3_3:86993626-86993645 | None:intergenic | 20.0% |
| !! | AATATAAAAGGGTGAAAATA+AGG | - | chr3_3:86993627-86993646 | None:intergenic | 20.0% |
| !!! | AAGTAAAAGTATATATGTTG+CGG | - | chr3_3:86994092-86994111 | None:intergenic | 20.0% |
| !!! | CTTCTACTTTTTTTATAAAC+TGG | + | chr3_3:86994158-86994177 | Msa0481190:intron | 20.0% |
| !!! | GAAATTTTCTTTTGTTTGTT+TGG | - | chr3_3:86994390-86994409 | None:intergenic | 20.0% |
| !! | CAAACAAAAGAAAATTTCAT+TGG | + | chr3_3:86994392-86994411 | Msa0481190:intron | 20.0% |
| !! | AAGTAAGTATGAAAAAAATG+AGG | - | chr3_3:86994426-86994445 | None:intergenic | 20.0% |
| !! | TATTTAATACAACTAGAAAG+TGG | + | chr3_3:86994830-86994849 | Msa0481190:intron | 20.0% |
| !! | ATTTAATACAACTAGAAAGT+GGG | + | chr3_3:86994831-86994850 | Msa0481190:intron | 20.0% |
| !! | AAATGAAATAGATAGTGTTA+AGG | + | chr3_3:86994903-86994922 | Msa0481190:intron | 20.0% |
| !! | AATGAAATAGATAGTGTTAA+GGG | + | chr3_3:86994904-86994923 | Msa0481190:intron | 20.0% |
| !! | TAAAAGTCTAGATTCATATA+AGG | - | chr3_3:86994983-86995002 | None:intergenic | 20.0% |
| !!! | ATATTGTTATTTAGAGAATG+GGG | - | chr3_3:86995094-86995113 | None:intergenic | 20.0% |
| !!! | CTATATTGTTATTTAGAGAA+TGG | - | chr3_3:86995096-86995115 | None:intergenic | 20.0% |
| !! | AAAGAAACAACATTTACAAT+TGG | + | chr3_3:86995177-86995196 | Msa0481190:intron | 20.0% |
| !! | ATTAATACAAGATTCTTGTT+TGG | + | chr3_3:86995341-86995360 | Msa0481190:intron | 20.0% |
| !!! | TTTAAAGTATTTGTATATGG+TGG | + | chr3_3:86995503-86995522 | Msa0481190:intron | 20.0% |
| !! | AGATCAAAAGATTTATAACT+AGG | - | chr3_3:86995725-86995744 | None:intergenic | 20.0% |
| !!! | TGGATATTAAACCTATATTT+TGG | + | chr3_3:86995813-86995832 | Msa0481190:intron | 20.0% |
| !! | TTAATTATCGACCAAAATAT+AGG | - | chr3_3:86995827-86995846 | None:intergenic | 20.0% |
| !! | TTGAAAAATAAGACAACATT+GGG | - | chr3_3:86996126-86996145 | None:intergenic | 20.0% |
| !! | AAAGTATAAGATTCTTATCA+AGG | + | chr3_3:86996265-86996284 | Msa0481190:CDS | 20.0% |
| !!! | CATATAAATTTTAAGATTCG+AGG | - | chr3_3:86996719-86996738 | None:intergenic | 20.0% |
| !! | CTCGAATCTTAAAATTTATA+TGG | + | chr3_3:86996717-86996736 | Msa0481190:intron | 20.0% |
| !!! | ATAACAGTACTTTTTTTTTG+GGG | - | chr3_3:86997143-86997162 | None:intergenic | 20.0% |
| !!! | TAGGTTATTTTTGCTTAGTT+TGG | + | chr3_3:86989517-86989536 | Msa0481190:five_prime_UTR | 25.0% |
| ! | CGAAAAGAAGTAAAAAAAGT+AGG | - | chr3_3:86989712-86989731 | None:intergenic | 25.0% |
| ! | TTGACTCTATAGTATTGTAT+TGG | + | chr3_3:86990150-86990169 | Msa0481190:intron | 25.0% |
| ! | TATTATGTAGCTTTCATACA+AGG | + | chr3_3:86990292-86990311 | Msa0481190:intron | 25.0% |
| ! | TCAAAACAAGTACAGAAATA+TGG | + | chr3_3:86990334-86990353 | Msa0481190:intron | 25.0% |
| ! | CATTTCAAAACATGATTGAA+TGG | - | chr3_3:86990394-86990413 | None:intergenic | 25.0% |
| !! | TAAGCATAGTTTAGAGTAAA+CGG | + | chr3_3:86990436-86990455 | Msa0481190:intron | 25.0% |
| !!! | TGGTTGACAAATACTTTTTT+GGG | + | chr3_3:86990489-86990508 | Msa0481190:intron | 25.0% |
| !! | ATGTTTTCATTCATTTCTCT+AGG | - | chr3_3:86990919-86990938 | None:intergenic | 25.0% |
| ! | ATTGTCAAAGACTCAAAATT+TGG | - | chr3_3:86990990-86991009 | None:intergenic | 25.0% |
| ! | TAATGCAGTTGAAAATTTGA+AGG | - | chr3_3:86991357-86991376 | None:intergenic | 25.0% |
| ! | ATCGCAAAAATTAAGAAACA+TGG | - | chr3_3:86991503-86991522 | None:intergenic | 25.0% |
| !! | ATTTTTGCGATTTAGTCAAT+AGG | + | chr3_3:86991512-86991531 | Msa0481190:intron | 25.0% |
| ! | GAAGAAAAAAGTAAACCAAA+AGG | - | chr3_3:86991730-86991749 | None:intergenic | 25.0% |
| ! | TTGAATGCAATGACAATAAT+AGG | - | chr3_3:86992069-86992088 | None:intergenic | 25.0% |
| !! | ATTGGTTAGTTGATATGAAT+TGG | - | chr3_3:86992226-86992245 | None:intergenic | 25.0% |
| !! | TATTTGTTGAAATTGGAATG+GGG | + | chr3_3:86992327-86992346 | Msa0481190:CDS | 25.0% |
| !! | GAAAAAGCATGATCAAATAA+AGG | - | chr3_3:86992528-86992547 | None:intergenic | 25.0% |
| ! | ACCATTACATTACATCTATT+TGG | + | chr3_3:86992662-86992681 | Msa0481190:intron | 25.0% |
| ! | ACCAAATAGATGTAATGTAA+TGG | - | chr3_3:86992666-86992685 | None:intergenic | 25.0% |
| ! | TGCTTAAATATACTAGAAAC+AGG | - | chr3_3:86993072-86993091 | None:intergenic | 25.0% |
| !!! | TGTTTCTAGTATATTTAAGC+AGG | + | chr3_3:86993071-86993090 | Msa0481190:CDS | 25.0% |
| !! | TCTACAATTTTACTTATTCC+AGG | + | chr3_3:86993310-86993329 | Msa0481190:intron | 25.0% |
| ! | AATGCATAAAATTGTCAAGA+AGG | - | chr3_3:86993542-86993561 | None:intergenic | 25.0% |
| ! | ACATGTATTGAAACTGAAAT+TGG | + | chr3_3:86993739-86993758 | Msa0481190:intron | 25.0% |
| ! | TCTGAAAGATTTGATCATAT+AGG | + | chr3_3:86993915-86993934 | Msa0481190:intron | 25.0% |
| ! | AAGAATGTTATCACAAAAAG+TGG | - | chr3_3:86994010-86994029 | None:intergenic | 25.0% |
| ! | TGTGATAACATTCTTAAGAA+AGG | + | chr3_3:86994015-86994034 | Msa0481190:CDS | 25.0% |
| ! | AATTGAAGAAACTCTTGAAA+AGG | + | chr3_3:86994065-86994084 | Msa0481190:CDS | 25.0% |
| ! | TTCTTTGAATTTGATACATG+CGG | + | chr3_3:86994110-86994129 | Msa0481190:intron | 25.0% |
| !! | AAGTAGAAGTATAAATGTTG+TGG | - | chr3_3:86994147-86994166 | None:intergenic | 25.0% |
| !! | TTTTATAAACTGGACATACA+TGG | + | chr3_3:86994168-86994187 | Msa0481190:intron | 25.0% |
| !!! | TTTATTTTACCTGTAGAACT+CGG | - | chr3_3:86994272-86994291 | None:intergenic | 25.0% |
| !!! | TCTTTTGTTTGTTTGGAAAT+TGG | - | chr3_3:86994383-86994402 | None:intergenic | 25.0% |
| !! | TTAAATTTTGTCTCATGCAA+GGG | + | chr3_3:86994521-86994540 | Msa0481190:intron | 25.0% |
| !! | TTGTTTCGTGACATTATTTT+AGG | + | chr3_3:86994621-86994640 | Msa0481190:intron | 25.0% |
| !!! | TGTTTCGTGACATTATTTTA+GGG | + | chr3_3:86994622-86994641 | Msa0481190:intron | 25.0% |
| !! | ACTTTTATCAGTATATCTGA+TGG | + | chr3_3:86994996-86995015 | Msa0481190:intron | 25.0% |
| !! | AAGTATTGTTATGGAAATCT+TGG | + | chr3_3:86995034-86995053 | Msa0481190:intron | 25.0% |
| ! | AGTATTGTTATGGAAATCTT+GGG | + | chr3_3:86995035-86995054 | Msa0481190:intron | 25.0% |
| ! | ATGTAATATTTACCTGAAAG+CGG | + | chr3_3:86995240-86995259 | Msa0481190:intron | 25.0% |
| ! | AACATCTTACATGAACAAAA+GGG | - | chr3_3:86995310-86995329 | None:intergenic | 25.0% |
| ! | AAACATCTTACATGAACAAA+AGG | - | chr3_3:86995311-86995330 | None:intergenic | 25.0% |
| ! | AAATACAGCATCTAGTATAT+TGG | - | chr3_3:86995529-86995548 | None:intergenic | 25.0% |
| !!! | GATGCTGTATTTTTTTTTGT+TGG | + | chr3_3:86995537-86995556 | Msa0481190:intron | 25.0% |
| !!! | CTGTATTTTTTTTTGTTGGT+TGG | + | chr3_3:86995541-86995560 | Msa0481190:intron | 25.0% |
| !! | TGATATAACCATCTAGAATT+TGG | + | chr3_3:86995780-86995799 | Msa0481190:intron | 25.0% |
| ! | TCACAAAATGGTAAAATGAA+CGG | - | chr3_3:86996067-86996086 | None:intergenic | 25.0% |
| ! | GTTGAAAAATAAGACAACAT+TGG | - | chr3_3:86996127-86996146 | None:intergenic | 25.0% |
| !!! | ATGTTGTCTTATTTTTCAAC+AGG | + | chr3_3:86996127-86996146 | Msa0481190:intron | 25.0% |
| ! | AATGACTCAGTTAAACTTAT+TGG | + | chr3_3:86996202-86996221 | Msa0481190:CDS | 25.0% |
| ! | TGAGAAGAAAAAAGTAATTG+AGG | + | chr3_3:86996505-86996524 | Msa0481190:CDS | 25.0% |
| !!! | TTTTTAATTGCTTTGACATC+AGG | - | chr3_3:86996758-86996777 | None:intergenic | 25.0% |
| ! | ATGTCAAAGCAATTAAAAAG+CGG | + | chr3_3:86996759-86996778 | Msa0481190:CDS | 25.0% |
| !!! | CTAAGGAAAAACTCTTTTTT+GGG | - | chr3_3:86996935-86996954 | None:intergenic | 25.0% |
| !!! | ACTAAGGAAAAACTCTTTTT+TGG | - | chr3_3:86996936-86996955 | None:intergenic | 25.0% |
| ! | AAAAGCAAAAAAATTGGTGA+GGG | - | chr3_3:86997058-86997077 | None:intergenic | 25.0% |
| ! | GCAATCAAAAGCAAAAAAAT+TGG | - | chr3_3:86997064-86997083 | None:intergenic | 25.0% |
| !!! | TAACAGTACTTTTTTTTTGG+GGG | - | chr3_3:86997142-86997161 | None:intergenic | 25.0% |
| AAAACTATAGACCTAGAACA+AGG | + | chr3_3:86989562-86989581 | Msa0481190:CDS | 30.0% | |
| !! | TTGACGTTTGTTTTCTTTAC+AGG | + | chr3_3:86989781-86989800 | Msa0481190:intron | 30.0% |
| TTGAATGTAATCACATGTGT+TGG | + | chr3_3:86990042-86990061 | Msa0481190:intron | 30.0% | |
| ! | TTTGTTGTAAATAACCTCTG+TGG | - | chr3_3:86990120-86990139 | None:intergenic | 30.0% |
| ATAGCAAACAAATCAAGTCT+GGG | - | chr3_3:86990199-86990218 | None:intergenic | 30.0% | |
| AATAGCAAACAAATCAAGTC+TGG | - | chr3_3:86990200-86990219 | None:intergenic | 30.0% | |
| !! | ACTTCTTTGTTTCTTTTTCG+TGG | + | chr3_3:86990261-86990280 | Msa0481190:intron | 30.0% |
| !! | CTTCTTTGTTTCTTTTTCGT+GGG | + | chr3_3:86990262-86990281 | Msa0481190:intron | 30.0% |
| !! | TTCTTTGTTTCTTTTTCGTG+GGG | + | chr3_3:86990263-86990282 | Msa0481190:intron | 30.0% |
| AAACATGATTGAATGGGTAA+AGG | - | chr3_3:86990387-86990406 | None:intergenic | 30.0% | |
| AGCAAATAGTGAATAATGCA+TGG | + | chr3_3:86990465-86990484 | Msa0481190:intron | 30.0% | |
| !!! | CTGGTTGACAAATACTTTTT+TGG | + | chr3_3:86990488-86990507 | Msa0481190:intron | 30.0% |
| TAGCAATCACTCACTATTTA+AGG | + | chr3_3:86990697-86990716 | Msa0481190:intron | 30.0% | |
| AGCAATCACTCACTATTTAA+GGG | + | chr3_3:86990698-86990717 | Msa0481190:intron | 30.0% | |
| ! | AATTTTGTGTATACCCACTA+CGG | - | chr3_3:86990877-86990896 | None:intergenic | 30.0% |
| TGGAAACAGAATTAAAGAAG+TGG | + | chr3_3:86990956-86990975 | Msa0481190:intron | 30.0% | |
| ! | TGTAAGAAGTTTTACAGACA+TGG | + | chr3_3:86991058-86991077 | Msa0481190:intron | 30.0% |
| ! | GTAAGAAGTTTTACAGACAT+GGG | + | chr3_3:86991059-86991078 | Msa0481190:intron | 30.0% |
| AGGAATCAGATAAATTAGTG+AGG | + | chr3_3:86991093-86991112 | Msa0481190:intron | 30.0% | |
| GGAATCAGATAAATTAGTGA+GGG | + | chr3_3:86991094-86991113 | Msa0481190:intron | 30.0% | |
| TAAGGGTAAGATCATGTTAA+AGG | - | chr3_3:86991203-86991222 | None:intergenic | 30.0% | |
| TACCTTTGTCTCTAAATAGA+AGG | + | chr3_3:86991294-86991313 | Msa0481190:intron | 30.0% | |
| TCAATAGGATCCTATATTCA+GGG | + | chr3_3:86991527-86991546 | Msa0481190:intron | 30.0% | |
| GATGGCATTTATTAGCATAA+GGG | - | chr3_3:86991698-86991717 | None:intergenic | 30.0% | |
| AGATGGCATTTATTAGCATA+AGG | - | chr3_3:86991699-86991718 | None:intergenic | 30.0% | |
| ACCAAAAGGAAAACAAAAGA+TGG | - | chr3_3:86991716-86991735 | None:intergenic | 30.0% | |
| ! | TCATGTTTTTCTCTCAAAGA+AGG | - | chr3_3:86991774-86991793 | None:intergenic | 30.0% |
| TTCTCGTTTCTTTCACTATT+TGG | + | chr3_3:86991857-86991876 | Msa0481190:CDS | 30.0% | |
| ACTGTAACATTACCAAATCA+CGG | - | chr3_3:86991944-86991963 | None:intergenic | 30.0% | |
| !!! | TGACGGGTTTTATTATTTAC+AGG | + | chr3_3:86992112-86992131 | Msa0481190:intron | 30.0% |
| CTTCAAAATCATTCTCATAG+TGG | - | chr3_3:86992361-86992380 | None:intergenic | 30.0% | |
| TTCTGCTTATTATTCTCGAA+AGG | + | chr3_3:86992400-86992419 | Msa0481190:CDS | 30.0% | |
| GAACAAACCTCTAATAACTT+TGG | - | chr3_3:86992622-86992641 | None:intergenic | 30.0% | |
| AGGAGAACAAAAACAAACAA+GGG | - | chr3_3:86992790-86992809 | None:intergenic | 30.0% | |
| TGCTTTACTTAGAGATGATA+AGG | + | chr3_3:86992899-86992918 | Msa0481190:CDS | 30.0% | |
| TACTTAGAGATGATAAGGTA+TGG | + | chr3_3:86992904-86992923 | Msa0481190:intron | 30.0% | |
| ACATAAGAACATTGCATTCA+TGG | - | chr3_3:86992974-86992993 | None:intergenic | 30.0% | |
| TCTAGTATATTTAAGCAGGT+TGG | + | chr3_3:86993075-86993094 | Msa0481190:intron | 30.0% | |
| ATATTTGCATTATCAAAGGG+AGG | - | chr3_3:86993128-86993147 | None:intergenic | 30.0% | |
| ! | TGAACTGGTAATTTTCAACT+CGG | + | chr3_3:86993452-86993471 | Msa0481190:intron | 30.0% |
| ! | AAACTGAAATTGGTCTCTTT+AGG | + | chr3_3:86993749-86993768 | Msa0481190:intron | 30.0% |
| ATCTTCAAATCAAAACCTTG+TGG | - | chr3_3:86993854-86993873 | None:intergenic | 30.0% | |
| !!! | ACAAGGTTTTGATTTGAAGA+TGG | + | chr3_3:86993853-86993872 | Msa0481190:intron | 30.0% |
| GATAACATTCTTAAGAAAGG+AGG | + | chr3_3:86994018-86994037 | Msa0481190:CDS | 30.0% | |
| ! | CTTGACTTTGGTATTTGTTT+TGG | + | chr3_3:86994192-86994211 | Msa0481190:intron | 30.0% |
| ! | GTTAAATTTTGTCTCATGCA+AGG | + | chr3_3:86994520-86994539 | Msa0481190:intron | 30.0% |
| !! | AATGTCTCTAAAATTAGGGA+AGG | - | chr3_3:86994554-86994573 | None:intergenic | 30.0% |
| AGACATTAATATGTCATCCT+TGG | + | chr3_3:86994567-86994586 | Msa0481190:intron | 30.0% | |
| !!! | GTTTCGTGACATTATTTTAG+GGG | + | chr3_3:86994623-86994642 | Msa0481190:intron | 30.0% |
| TTCAACTAAGGGAATAGAAA+TGG | - | chr3_3:86994682-86994701 | None:intergenic | 30.0% | |
| TAGTTTACATTGAGAGGTTA+GGG | - | chr3_3:86994782-86994801 | None:intergenic | 30.0% | |
| ATAGTTTACATTGAGAGGTT+AGG | - | chr3_3:86994783-86994802 | None:intergenic | 30.0% | |
| TCGTAATAGTTTACATTGAG+AGG | - | chr3_3:86994788-86994807 | None:intergenic | 30.0% | |
| AGAAAGTGGGATAATTAGTT+CGG | + | chr3_3:86994844-86994863 | Msa0481190:intron | 30.0% | |
| AAACTAAAAGCTGAGATGAA+TGG | + | chr3_3:86994869-86994888 | Msa0481190:intron | 30.0% | |
| GATAGTGTTAAGGGAAAATA+TGG | + | chr3_3:86994913-86994932 | Msa0481190:intron | 30.0% | |
| TGTTAAGGGAAAATATGGAA+AGG | + | chr3_3:86994918-86994937 | Msa0481190:intron | 30.0% | |
| TAACTGTTAAGTCTATTCCA+GGG | - | chr3_3:86995679-86995698 | None:intergenic | 30.0% | |
| CACAAAATGGTAAAATGAAC+GGG | - | chr3_3:86996066-86996085 | None:intergenic | 30.0% | |
| TATTGGATGAAGATGTCATT+AGG | + | chr3_3:86996219-86996238 | Msa0481190:CDS | 30.0% | |
| TCAATCTCTATTCTCTTTAC+CGG | + | chr3_3:86996424-86996443 | Msa0481190:intron | 30.0% | |
| !!! | TAAATTTTAAGATTCGAGGG+AGG | - | chr3_3:86996715-86996734 | None:intergenic | 30.0% |
| ! | GGATTGAAGATTTGATTTCT+CGG | + | chr3_3:86996780-86996799 | Msa0481190:CDS | 30.0% |
| ! | GATTGAAGATTTGATTTCTC+GGG | + | chr3_3:86996781-86996800 | Msa0481190:CDS | 30.0% |
| GCTAAGTACTTGAACATATT+TGG | - | chr3_3:86996833-86996852 | None:intergenic | 30.0% | |
| ATATGATTGAGCAAATGAAG+TGG | + | chr3_3:86996864-86996883 | Msa0481190:three_prime_UTR | 30.0% | |
| CAAAAGCAAAAAAATTGGTG+AGG | - | chr3_3:86997059-86997078 | None:intergenic | 30.0% | |
| !!! | AACAGTACTTTTTTTTTGGG+GGG | - | chr3_3:86997141-86997160 | None:intergenic | 30.0% |
| ! | AGTACTGTTATTTGTAGCTT+CGG | + | chr3_3:86997152-86997171 | Msa0481190:three_prime_UTR | 30.0% |
| !! | AATGTAACACGAGCATTGAT+CGG | - | chr3_3:86989264-86989283 | None:intergenic | 35.0% |
| TAGAAGAAGAAGATGAAGGA+AGG | - | chr3_3:86989375-86989394 | None:intergenic | 35.0% | |
| ACGATAGAAGAAGAAGATGA+AGG | - | chr3_3:86989379-86989398 | None:intergenic | 35.0% | |
| TATAGACCTAGAACAAGGAT+GGG | + | chr3_3:86989567-86989586 | Msa0481190:CDS | 35.0% | |
| TAAAATCCCATCCTTGTTCT+AGG | - | chr3_3:86989576-86989595 | None:intergenic | 35.0% | |
| ! | AAGGATGGGATTTTATGCAT+AGG | + | chr3_3:86989581-86989600 | Msa0481190:CDS | 35.0% |
| ! | AGGATGGGATTTTATGCATA+GGG | + | chr3_3:86989582-86989601 | Msa0481190:CDS | 35.0% |
| AAGCTCAAGAACATTCTTGA+AGG | + | chr3_3:86989613-86989632 | Msa0481190:CDS | 35.0% | |
| TAATCTTCAGGACTGAATTG+AGG | - | chr3_3:86989649-86989668 | None:intergenic | 35.0% | |
| TACAGCATCATGTAATCTTC+AGG | - | chr3_3:86989661-86989680 | None:intergenic | 35.0% | |
| GCTAACATAAACACAAACAC+CGG | + | chr3_3:86989964-86989983 | Msa0481190:intron | 35.0% | |
| CTAACATAAACACAAACACC+GGG | + | chr3_3:86989965-86989984 | Msa0481190:intron | 35.0% | |
| TACTCTAAACTATGCTTAGC+TGG | - | chr3_3:86990434-86990453 | None:intergenic | 35.0% | |
| AATAGTGAATAATGCATGGC+TGG | + | chr3_3:86990469-86990488 | Msa0481190:intron | 35.0% | |
| !!! | TACTTTTTTGGGAACATCAG+AGG | + | chr3_3:86990500-86990519 | Msa0481190:intron | 35.0% |
| !!! | ACTTTTTTGGGAACATCAGA+GGG | + | chr3_3:86990501-86990520 | Msa0481190:intron | 35.0% |
| ATCAGAGGGAAATAAACTGA+GGG | + | chr3_3:86990515-86990534 | Msa0481190:intron | 35.0% | |
| ! | GTAATGTGCTTGATAACATG+CGG | + | chr3_3:86990571-86990590 | Msa0481190:intron | 35.0% |
| ACTCACTATTTAAGGGTGAA+AGG | + | chr3_3:86990705-86990724 | Msa0481190:intron | 35.0% | |
| CTCACTATTTAAGGGTGAAA+GGG | + | chr3_3:86990706-86990725 | Msa0481190:intron | 35.0% | |
| TATGTTAGTGCTTCATATGC+AGG | + | chr3_3:86990837-86990856 | Msa0481190:intron | 35.0% | |
| CATCATCAAGAAGAACTAGA+TGG | + | chr3_3:86990936-86990955 | Msa0481190:intron | 35.0% | |
| TACAATAGCCTGAGTGTAAA+AGG | - | chr3_3:86991042-86991061 | None:intergenic | 35.0% | |
| TTTACAGACATGGGATTGAA+TGG | + | chr3_3:86991068-86991087 | Msa0481190:intron | 35.0% | |
| TCAGATAAATTAGTGAGGGA+AGG | + | chr3_3:86991098-86991117 | Msa0481190:intron | 35.0% | |
| CAGATAAATTAGTGAGGGAA+GGG | + | chr3_3:86991099-86991118 | Msa0481190:intron | 35.0% | |
| AGAATCGTTGTTCTCATGTT+TGG | + | chr3_3:86991134-86991153 | Msa0481190:intron | 35.0% | |
| GTTGGAGTCTAATTGGATAA+GGG | - | chr3_3:86991220-86991239 | None:intergenic | 35.0% | |
| AATTTGAAGGTCCTGTGAAA+AGG | - | chr3_3:86991344-86991363 | None:intergenic | 35.0% | |
| GTCAATAGGATCCTATATTC+AGG | + | chr3_3:86991526-86991545 | Msa0481190:intron | 35.0% | |
| !!! | GCCATCTTTTGTTTTCCTTT+TGG | + | chr3_3:86991712-86991731 | Msa0481190:intron | 35.0% |
| TTTCTTCCCTTTATGAGTTC+AGG | + | chr3_3:86991743-86991762 | Msa0481190:intron | 35.0% | |
| GTAAGACCTGAACTCATAAA+GGG | - | chr3_3:86991752-86991771 | None:intergenic | 35.0% | |
| TACGAGAACTTGTAAAGAGA+TGG | + | chr3_3:86991805-86991824 | Msa0481190:CDS | 35.0% | |
| ACGAGAACTTGTAAAGAGAT+GGG | + | chr3_3:86991806-86991825 | Msa0481190:CDS | 35.0% | |
| TTCCACCTCTTAATGAAGTT+GGG | + | chr3_3:86991907-86991926 | Msa0481190:CDS | 35.0% | |
| AGGTTTACAAGGAACTACAT+GGG | + | chr3_3:86992132-86992151 | Msa0481190:intron | 35.0% | |
| TGAAATTGGAATGGGGAAAA+TGG | + | chr3_3:86992334-86992353 | Msa0481190:CDS | 35.0% | |
| ATTCTCGAAAGGCTTCAAAT+TGG | + | chr3_3:86992411-86992430 | Msa0481190:CDS | 35.0% | |
| AATCAGGACAAGAATCTTCT+AGG | - | chr3_3:86992439-86992458 | None:intergenic | 35.0% | |
| TTGTCCTGATTATATGCTCA+AGG | + | chr3_3:86992448-86992467 | Msa0481190:CDS | 35.0% | |
| CATACCTTGAGCATATAATC+AGG | - | chr3_3:86992455-86992474 | None:intergenic | 35.0% | |
| !!! | GATCATGCTTTTTCTACTAC+AGG | + | chr3_3:86992534-86992553 | Msa0481190:intron | 35.0% |
| TAGTGAGCCAAAGTTATTAG+AGG | + | chr3_3:86992612-86992631 | Msa0481190:CDS | 35.0% | |
| CAGGAGAACAAAAACAAACA+AGG | - | chr3_3:86992791-86992810 | None:intergenic | 35.0% | |
| !!! | CTTGTTTGTTTTTGTTCTCC+TGG | + | chr3_3:86992789-86992808 | Msa0481190:intron | 35.0% |
| ! | TAAGTGATGCAAGTTTTTCC+AGG | - | chr3_3:86992810-86992829 | None:intergenic | 35.0% |
| !!! | CTATTTTCTAAAATACCCCG+TGG | + | chr3_3:86993039-86993058 | Msa0481190:CDS | 35.0% |
| ! | AGTATATTTAAGCAGGTTGG+TGG | + | chr3_3:86993078-86993097 | Msa0481190:intron | 35.0% |
| GTGGTAACATGCTGATAAAA+AGG | - | chr3_3:86993217-86993236 | None:intergenic | 35.0% | |
| AGATGCAGCTAGTAACAAAA+AGG | + | chr3_3:86993267-86993286 | Msa0481190:CDS | 35.0% | |
| TTTACTTATTCCAGGCTGAA+AGG | + | chr3_3:86993318-86993337 | Msa0481190:intron | 35.0% | |
| AACAAATAAAGGAGGTGAAC+TGG | + | chr3_3:86993437-86993456 | Msa0481190:intron | 35.0% | |
| ! | GAACTGGTAATTTTCAACTC+GGG | + | chr3_3:86993453-86993472 | Msa0481190:intron | 35.0% |
| ! | AACTGGTAATTTTCAACTCG+GGG | + | chr3_3:86993454-86993473 | Msa0481190:intron | 35.0% |
| ATGTGATTTCTTACTGCTGA+AGG | + | chr3_3:86993577-86993596 | Msa0481190:intron | 35.0% | |
| GATCATATAGGCTCTTAAAG+AGG | + | chr3_3:86993927-86993946 | Msa0481190:intron | 35.0% | |
| !! | TTTGAGGTCTTTTGCAACAA+AGG | + | chr3_3:86993952-86993971 | Msa0481190:CDS | 35.0% |
| !!! | ATTTGTTTTGGTCTATCTGC+AGG | + | chr3_3:86994204-86994223 | Msa0481190:intron | 35.0% |
| ! | GGCTTTATCACCAATTGATT+AGG | + | chr3_3:86994644-86994663 | Msa0481190:intron | 35.0% |
| ! | GGAATTGACTCCTAATCAAT+TGG | - | chr3_3:86994657-86994676 | None:intergenic | 35.0% |
| TATTCCCTTAGTTGAATCCT+TGG | + | chr3_3:86994686-86994705 | Msa0481190:intron | 35.0% | |
| AAAGCCAAGGATTCAACTAA+GGG | - | chr3_3:86994693-86994712 | None:intergenic | 35.0% | |
| AAGGGAAAATATGGAAAGGA+AGG | + | chr3_3:86994922-86994941 | Msa0481190:intron | 35.0% | |
| AGGGAAAATATGGAAAGGAA+GGG | + | chr3_3:86994923-86994942 | Msa0481190:intron | 35.0% | |
| ! | CAACGAGACAAGTATTGTTA+TGG | + | chr3_3:86995025-86995044 | Msa0481190:intron | 35.0% |
| ! | TTGTTTAATTAGCCGCTTTC+AGG | - | chr3_3:86995255-86995274 | None:intergenic | 35.0% |
| ! | ATTCTTGTTTGGTTGCTTTC+AGG | + | chr3_3:86995352-86995371 | Msa0481190:intron | 35.0% |
| ACAAAATTGAAGCAACAGTG+TGG | + | chr3_3:86995441-86995460 | Msa0481190:CDS | 35.0% | |
| GTAACTGTTAAGTCTATTCC+AGG | - | chr3_3:86995680-86995699 | None:intergenic | 35.0% | |
| ACTGAACACCAAATTCTAGA+TGG | - | chr3_3:86995791-86995810 | None:intergenic | 35.0% | |
| !! | TAGAATTTGGTGTTCAGTGT+TGG | + | chr3_3:86995793-86995812 | Msa0481190:intron | 35.0% |
| TAATACATTCTCTCTCTCTC+AGG | + | chr3_3:86995844-86995863 | Msa0481190:intron | 35.0% | |
| CAAAGCACAGAAAACTTACA+TGG | + | chr3_3:86995909-86995928 | Msa0481190:CDS | 35.0% | |
| ACTTACATGGATTTACTCCT+TGG | + | chr3_3:86995922-86995941 | Msa0481190:CDS | 35.0% | |
| CTTACATGGATTTACTCCTT+GGG | + | chr3_3:86995923-86995942 | Msa0481190:CDS | 35.0% | |
| AAACTTCCCACTTATGTTAC+AGG | - | chr3_3:86995951-86995970 | None:intergenic | 35.0% | |
| AGATGGTAAGTGATATAACC+TGG | - | chr3_3:86996009-86996028 | None:intergenic | 35.0% | |
| CATTATCACAGATAAGCAGA+TGG | - | chr3_3:86996026-86996045 | None:intergenic | 35.0% | |
| GAAATCCATATGAAAATCCG+CGG | - | chr3_3:86996093-86996112 | None:intergenic | 35.0% | |
| AGAATAACTCAGTCTATCAG+AGG | - | chr3_3:86996177-86996196 | None:intergenic | 35.0% | |
| !! | GGTGATATCGTTTTTGTGTT+TGG | - | chr3_3:86996293-86996312 | None:intergenic | 35.0% |
| CAAAGTTCACTGACAAAATG+AGG | + | chr3_3:86996336-86996355 | Msa0481190:CDS | 35.0% | |
| !!! | ACTTTTTTCTTCTCATCCAC+AGG | - | chr3_3:86996500-86996519 | None:intergenic | 35.0% |
| ! | TATGAAGAGTCGGAAAGTTT+TGG | + | chr3_3:86996577-86996596 | Msa0481190:CDS | 35.0% |
| ! | ATGAAGAGTCGGAAAGTTTT+GGG | + | chr3_3:86996578-86996597 | Msa0481190:CDS | 35.0% |
| ! | TTTGATTTCTCGGGATTACT+TGG | + | chr3_3:86996790-86996809 | Msa0481190:CDS | 35.0% |
| !! | TTCCTTAGTTTTCTCGAAAG+AGG | + | chr3_3:86996947-86996966 | Msa0481190:three_prime_UTR | 35.0% |
| GCAAATGTAGATTACTGTTG+TGG | + | chr3_3:86996974-86996993 | Msa0481190:three_prime_UTR | 35.0% | |
| !!! | ACAGTACTTTTTTTTTGGGG+GGG | - | chr3_3:86997140-86997159 | None:intergenic | 35.0% |
| TTATCAGCTTAGAAATCACC+AGG | + | chr3_3:86997191-86997210 | Msa0481190:three_prime_UTR | 35.0% | |
| AAATTATGTCTGTGTCTGAC+TGG | + | chr3_3:86997313-86997332 | Msa0481190:three_prime_UTR | 35.0% | |
| CTTTATATAACGCGAGAGTA+TGG | + | chr3_3:86997342-86997361 | Msa0481190:three_prime_UTR | 35.0% | |
| TCTTTCTCCTTCTTCAACCT+AGG | + | chr3_3:86989285-86989304 | Msa0481190:five_prime_UTR | 40.0% | |
| CTTTCTCCTTCTTCAACCTA+GGG | + | chr3_3:86989286-86989305 | Msa0481190:five_prime_UTR | 40.0% | |
| AGTTGAATCGCGAGAATGAA+GGG | - | chr3_3:86989314-86989333 | None:intergenic | 40.0% | |
| AAGATGAAGGAAGGAAGGAA+GGG | - | chr3_3:86989366-86989385 | None:intergenic | 40.0% | |
| AGAAGAAGATGAAGGAAGGA+AGG | - | chr3_3:86989371-86989390 | None:intergenic | 40.0% | |
| GCAACATGTCAATGAGTGAA+AGG | + | chr3_3:86989539-86989558 | Msa0481190:exon | 40.0% | |
| CTATAGACCTAGAACAAGGA+TGG | + | chr3_3:86989566-86989585 | Msa0481190:CDS | 40.0% | |
| ! | GGATGGGATTTTATGCATAG+GGG | + | chr3_3:86989583-86989602 | Msa0481190:CDS | 40.0% |
| TCCTTGTACTTGTCATACAG+CGG | - | chr3_3:86989855-86989874 | None:intergenic | 40.0% | |
| ! | TGAAGAGTACATCGTGTCAA+CGG | + | chr3_3:86989881-86989900 | Msa0481190:CDS | 40.0% |
| CGGTGAGTTACACTTTCATT+TGG | + | chr3_3:86989901-86989920 | Msa0481190:intron | 40.0% | |
| GTTATCACTCGTGTGACAAT+CGG | + | chr3_3:86990224-86990243 | Msa0481190:intron | 40.0% | |
| ! | TGACAATCGGATTTGGAGTT+TGG | + | chr3_3:86990237-86990256 | Msa0481190:intron | 40.0% |
| CATCAGAGGGAAATAAACTG+AGG | + | chr3_3:86990514-86990533 | Msa0481190:intron | 40.0% | |
| GGAAATAAACTGAGGGCAAA+AGG | + | chr3_3:86990522-86990541 | Msa0481190:intron | 40.0% | |
| AAGCACATTACCTCAGCAAA+TGG | - | chr3_3:86990562-86990581 | None:intergenic | 40.0% | |
| CACTCTCAACCTTAAAGAGT+GGG | - | chr3_3:86990610-86990629 | None:intergenic | 40.0% | |
| TCACTCTCAACCTTAAAGAG+TGG | - | chr3_3:86990611-86990630 | None:intergenic | 40.0% | |
| TGTGCTTGATTACATGCACT+AGG | + | chr3_3:86990674-86990693 | Msa0481190:intron | 40.0% | |
| AGACATGGGATTGAATGGAA+AGG | + | chr3_3:86991073-86991092 | Msa0481190:intron | 40.0% | |
| CTCTTTCTTGCCATATTGAC+CGG | - | chr3_3:86991160-86991179 | None:intergenic | 40.0% | |
| CGTTGGAGTCTAATTGGATA+AGG | - | chr3_3:86991221-86991240 | None:intergenic | 40.0% | |
| ACGTAACGTTGGAGTCTAAT+TGG | - | chr3_3:86991227-86991246 | None:intergenic | 40.0% | |
| AATTAGACTCCAACGTTACG+TGG | + | chr3_3:86991226-86991245 | Msa0481190:intron | 40.0% | |
| ATTAGACTCCAACGTTACGT+GGG | + | chr3_3:86991227-86991246 | Msa0481190:intron | 40.0% | |
| GGCCTTCTATTTAGAGACAA+AGG | - | chr3_3:86991299-86991318 | None:intergenic | 40.0% | |
| ! | TTCCACTGTATCCTTTTCAC+AGG | + | chr3_3:86991330-86991349 | Msa0481190:intron | 40.0% |
| !! | CCACTTTTGTCCCTGAATAT+AGG | - | chr3_3:86991540-86991559 | None:intergenic | 40.0% |
| CCTATATTCAGGGACAAAAG+TGG | + | chr3_3:86991537-86991556 | Msa0481190:intron | 40.0% | |
| GGTAAGACCTGAACTCATAA+AGG | - | chr3_3:86991753-86991772 | None:intergenic | 40.0% | |
| ATGGGCGAACCATAAAATCA+TGG | + | chr3_3:86991824-86991843 | Msa0481190:CDS | 40.0% | |
| CGAACCATAAAATCATGGTG+AGG | + | chr3_3:86991829-86991848 | Msa0481190:CDS | 40.0% | |
| ACCATAAAATCATGGTGAGG+TGG | + | chr3_3:86991832-86991851 | Msa0481190:CDS | 40.0% | |
| CTTCCACCTCTTAATGAAGT+TGG | + | chr3_3:86991906-86991925 | Msa0481190:CDS | 40.0% | |
| AACCCAACTTCATTAAGAGG+TGG | - | chr3_3:86991912-86991931 | None:intergenic | 40.0% | |
| ACCTCTTAATGAAGTTGGGT+TGG | + | chr3_3:86991911-86991930 | Msa0481190:CDS | 40.0% | |
| CAGGTTTACAAGGAACTACA+TGG | + | chr3_3:86992131-86992150 | Msa0481190:intron | 40.0% | |
| AAAGATTGATCAAGAACGCG+AGG | + | chr3_3:86992262-86992281 | Msa0481190:intron | 40.0% | |
| AAGATTGATCAAGAACGCGA+GGG | + | chr3_3:86992263-86992282 | Msa0481190:intron | 40.0% | |
| CTTAAGACGGGAGAAAGATA+GGG | + | chr3_3:86992567-86992586 | Msa0481190:CDS | 40.0% | |
| ! | TGGTCTTTTGCCATGTTCAA+TGG | + | chr3_3:86992682-86992701 | Msa0481190:intron | 40.0% |
| TTCAGTGTGAAGACTTGTCA+AGG | + | chr3_3:86993007-86993026 | Msa0481190:intron | 40.0% | |
| AAGACTTGTCAAGGATGTTC+AGG | + | chr3_3:86993016-86993035 | Msa0481190:CDS | 40.0% | |
| TATCAGCATGTTACCACTGA+AGG | + | chr3_3:86993220-86993239 | Msa0481190:intron | 40.0% | |
| GATGAAAGACTACTACGCTT+AGG | + | chr3_3:86993364-86993383 | Msa0481190:intron | 40.0% | |
| AAGACTACTACGCTTAGGAT+CGG | + | chr3_3:86993369-86993388 | Msa0481190:intron | 40.0% | |
| GATTTCAGTGCATTGTAGAC+AGG | + | chr3_3:86993499-86993518 | Msa0481190:intron | 40.0% | |
| AATGTCTACAGGCAGAGAAA+AGG | + | chr3_3:86993649-86993668 | Msa0481190:intron | 40.0% | |
| ATGTCTACAGGCAGAGAAAA+GGG | + | chr3_3:86993650-86993669 | Msa0481190:intron | 40.0% | |
| GCAGAGAAAAGGGATATTGT+TGG | + | chr3_3:86993660-86993679 | Msa0481190:CDS | 40.0% | |
| !! | GGTCTCTTTAGGTTTTTGTC+CGG | + | chr3_3:86993760-86993779 | Msa0481190:intron | 40.0% |
| CATGTAGCTCAATCACTTTC+CGG | - | chr3_3:86993782-86993801 | None:intergenic | 40.0% | |
| ! | AAGAGTGTGATTCTGGAAAC+AGG | - | chr3_3:86993829-86993848 | None:intergenic | 40.0% |
| ! | TGTGGAAAAGAGTGTGATTC+TGG | - | chr3_3:86993836-86993855 | None:intergenic | 40.0% |
| ! | GAATCACACTCTTTTCCACA+AGG | + | chr3_3:86993836-86993855 | Msa0481190:CDS | 40.0% |
| !!! | TTTTGCAACAAAGGTGTTGC+TGG | + | chr3_3:86993961-86993980 | Msa0481190:CDS | 40.0% |
| ! | GACATACATGGTCTTGACTT+TGG | + | chr3_3:86994180-86994199 | Msa0481190:intron | 40.0% |
| GCTCGCTTATATTAGTGACA+AGG | + | chr3_3:86994237-86994256 | Msa0481190:CDS | 40.0% | |
| !! | GGTTGTTGTTGTTTGGAGTT+TGG | - | chr3_3:86994326-86994345 | None:intergenic | 40.0% |
| ! | AAGGCTTGGTTGTTGTTGTT+TGG | - | chr3_3:86994333-86994352 | None:intergenic | 40.0% |
| AAAACGTTACCCCACTTAGT+GGG | - | chr3_3:86994358-86994377 | None:intergenic | 40.0% | |
| TTCAGTGAATCAGTAGTCCA+CGG | - | chr3_3:86994465-86994484 | None:intergenic | 40.0% | |
| ATTGCTGCTACTACCATTCT+CGG | + | chr3_3:86994485-86994504 | Msa0481190:intron | 40.0% | |
| CTCTTAGAAACAACCGAGAA+TGG | - | chr3_3:86994501-86994520 | None:intergenic | 40.0% | |
| GAAACAAGCGATTAGGTGAA+AGG | - | chr3_3:86994593-86994612 | None:intergenic | 40.0% | |
| ! | TCACCTAATCGCTTGTTTCT+TGG | + | chr3_3:86994594-86994613 | Msa0481190:intron | 40.0% |
| TCTCCAAGAAACAAGCGATT+AGG | - | chr3_3:86994600-86994619 | None:intergenic | 40.0% | |
| ACTAAGGGAATAGAAATGGC+TGG | - | chr3_3:86994678-86994697 | None:intergenic | 40.0% | |
| GAAAGCCAAGGATTCAACTA+AGG | - | chr3_3:86994694-86994713 | None:intergenic | 40.0% | |
| GCTTAAAATGTGGAAAGCCA+AGG | - | chr3_3:86994706-86994725 | None:intergenic | 40.0% | |
| ! | GTCTGCTTTGGCTTAAAATG+TGG | - | chr3_3:86994716-86994735 | None:intergenic | 40.0% |
| AAATTGAAGCAACAGTGTGG+TGG | + | chr3_3:86995444-86995463 | Msa0481190:CDS | 40.0% | |
| TGGACAGTTTACCTCAAAGA+TGG | + | chr3_3:86995464-86995483 | Msa0481190:CDS | 40.0% | |
| CAGTTTACCTCAAAGATGGA+AGG | + | chr3_3:86995468-86995487 | Msa0481190:CDS | 40.0% | |
| TACCTCAAAGATGGAAGGAA+TGG | + | chr3_3:86995473-86995492 | Msa0481190:CDS | 40.0% | |
| !!! | TGATTTTTTTCACTCCCACC+AGG | + | chr3_3:86995580-86995599 | Msa0481190:intron | 40.0% |
| !! | GGAGAATCAAACTAGCTTTG+AGG | + | chr3_3:86995625-86995644 | Msa0481190:CDS | 40.0% |
| TCTCAATCTTCCTGCAGAAA+TGG | + | chr3_3:86995742-86995761 | Msa0481190:CDS | 40.0% | |
| TTCCTGCAGAAATGGTAATC+TGG | + | chr3_3:86995750-86995769 | Msa0481190:intron | 40.0% | |
| ATCCAGATTACCATTTCTGC+AGG | - | chr3_3:86995755-86995774 | None:intergenic | 40.0% | |
| ACTTATGTTACAGGTACCCA+AGG | - | chr3_3:86995942-86995961 | None:intergenic | 40.0% | |
| TTGGGTACCTGTAACATAAG+TGG | + | chr3_3:86995941-86995960 | Msa0481190:CDS | 40.0% | |
| TGGGTACCTGTAACATAAGT+GGG | + | chr3_3:86995942-86995961 | Msa0481190:CDS | 40.0% | |
| GAAGTTTGACCCAAAAACAG+TGG | + | chr3_3:86995964-86995983 | Msa0481190:CDS | 40.0% | |
| !! | CAACAAGCTCCACTGTTTTT+GGG | - | chr3_3:86995976-86995995 | None:intergenic | 40.0% |
| ! | ACAACAAGCTCCACTGTTTT+TGG | - | chr3_3:86995977-86995996 | None:intergenic | 40.0% |
| GGTAAGTGATATAACCTGGT+AGG | - | chr3_3:86996005-86996024 | None:intergenic | 40.0% | |
| ATGGTAAAATGAACGGGTGA+GGG | - | chr3_3:86996060-86996079 | None:intergenic | 40.0% | |
| AATGGTAAAATGAACGGGTG+AGG | - | chr3_3:86996061-86996080 | None:intergenic | 40.0% | |
| ! | TTACCATTTTGTGATGTCCG+CGG | + | chr3_3:86996073-86996092 | Msa0481190:intron | 40.0% |
| ACTTTGCACATGACAAAGAG+TGG | - | chr3_3:86996250-86996269 | None:intergenic | 40.0% | |
| AGTTCACTGACAAAATGAGG+AGG | + | chr3_3:86996339-86996358 | Msa0481190:CDS | 40.0% | |
| TGACAAAATGAGGAGGATCA+AGG | + | chr3_3:86996346-86996365 | Msa0481190:CDS | 40.0% | |
| ! | TTTTTCTTCTCATCCACAGG+AGG | - | chr3_3:86996497-86996516 | None:intergenic | 40.0% |
| CTTCATAATGCGCACAATTG+AGG | - | chr3_3:86996564-86996583 | None:intergenic | 40.0% | |
| TTGTGCGCATTATGAAGAGT+CGG | + | chr3_3:86996567-86996586 | Msa0481190:CDS | 40.0% | |
| GGGCTATCAACAGTTAGTTA+TGG | + | chr3_3:86996598-86996617 | Msa0481190:CDS | 40.0% | |
| GGGAGGTAAAAAAACACACA+AGG | - | chr3_3:86996698-86996717 | None:intergenic | 40.0% | |
| GTTGCAACTAGCAAAACAAG+AGG | + | chr3_3:86996889-86996908 | Msa0481190:three_prime_UTR | 40.0% | |
| CTCCTCTTTCGAGAAAACTA+AGG | - | chr3_3:86996952-86996971 | None:intergenic | 40.0% | |
| AATGAGCTGGAACAACTCAA+TGG | - | chr3_3:86997031-86997050 | None:intergenic | 40.0% | |
| ! | ATTGAGTTGTTCCAGCTCAT+TGG | + | chr3_3:86997030-86997049 | Msa0481190:three_prime_UTR | 40.0% |
| GCAGCAAATAAGCTATGAGA+TGG | - | chr3_3:86997094-86997113 | None:intergenic | 40.0% | |
| !!! | TACTTTTTTTTTGGGGGGGT+GGG | - | chr3_3:86997136-86997155 | None:intergenic | 40.0% |
| CTTAGAAATCACCAGGTGAA+TGG | + | chr3_3:86997198-86997217 | Msa0481190:three_prime_UTR | 40.0% | |
| AGAAGACATATCCATTCACC+TGG | - | chr3_3:86997212-86997231 | None:intergenic | 40.0% | |
| GAGTTGAATCGCGAGAATGA+AGG | - | chr3_3:86989315-86989334 | None:intergenic | 45.0% | |
| CTCGCGATTCAACTCATTCA+AGG | + | chr3_3:86989320-86989339 | Msa0481190:five_prime_UTR | 45.0% | |
| GAAGATGAAGGAAGGAAGGA+AGG | - | chr3_3:86989367-86989386 | None:intergenic | 45.0% | |
| GGCTGAGAATAGTCATTAGG+AGG | - | chr3_3:86989834-86989853 | None:intergenic | 45.0% | |
| AGCGGCTGAGAATAGTCATT+AGG | - | chr3_3:86989837-86989856 | None:intergenic | 45.0% | |
| ACTCGTGTGACAATCGGATT+TGG | + | chr3_3:86990230-86990249 | Msa0481190:intron | 45.0% | |
| ATGCTTAGCTGGTTGCACTT+GGG | - | chr3_3:86990423-86990442 | None:intergenic | 45.0% | |
| TATGCTTAGCTGGTTGCACT+TGG | - | chr3_3:86990424-86990443 | None:intergenic | 45.0% | |
| CTCAGCAAATGGCACTTGAA+TGG | - | chr3_3:86990551-86990570 | None:intergenic | 45.0% | |
| !! | CATTCAAGTGCCATTTGCTG+AGG | + | chr3_3:86990549-86990568 | Msa0481190:intron | 45.0% |
| ! | TGTGCTTGATAACATGCGGT+AGG | + | chr3_3:86990575-86990594 | Msa0481190:intron | 45.0% |
| TAGCAACCACCCACTCTTTA+AGG | + | chr3_3:86990598-86990617 | Msa0481190:intron | 45.0% | |
| TCTCAACCTTAAAGAGTGGG+TGG | - | chr3_3:86990607-86990626 | None:intergenic | 45.0% | |
| AGTGCTTCATATGCAGGTAG+TGG | + | chr3_3:86990843-86990862 | Msa0481190:intron | 45.0% | |
| GTGCTTCATATGCAGGTAGT+GGG | + | chr3_3:86990844-86990863 | Msa0481190:intron | 45.0% | |
| TGCTTCATATGCAGGTAGTG+GGG | + | chr3_3:86990845-86990864 | Msa0481190:intron | 45.0% | |
| ! | GGGGAATTCCTTTTACACTC+AGG | + | chr3_3:86991031-86991050 | Msa0481190:intron | 45.0% |
| TAGTGAGGGAAGGGATACAA+TGG | + | chr3_3:86991108-86991127 | Msa0481190:intron | 45.0% | |
| TCGTTGTTCTCATGTTTGGC+CGG | + | chr3_3:86991138-86991157 | Msa0481190:intron | 45.0% | |
| TCATGTTTGGCCGGTCAATA+TGG | + | chr3_3:86991147-86991166 | Msa0481190:intron | 45.0% | |
| CGGTCAATATGGCAAGAAAG+AGG | + | chr3_3:86991158-86991177 | Msa0481190:intron | 45.0% | |
| GTCCTGTGAAAAGGATACAG+TGG | - | chr3_3:86991335-86991354 | None:intergenic | 45.0% | |
| ! | GCCACCTCACCATGATTTTA+TGG | - | chr3_3:86991836-86991855 | None:intergenic | 45.0% |
| GCCAACCCAACTTCATTAAG+AGG | - | chr3_3:86991915-86991934 | None:intergenic | 45.0% | |
| !! | GCTTTTTCTACTACAGGCTG+AGG | + | chr3_3:86992540-86992559 | Msa0481190:intron | 45.0% |
| GCTTAAGACGGGAGAAAGAT+AGG | + | chr3_3:86992566-86992585 | Msa0481190:CDS | 45.0% | |
| TGCTCGCAATCCATTGAACA+TGG | - | chr3_3:86992695-86992714 | None:intergenic | 45.0% | |
| !! | TTCTAAAATACCCCGTGGCT+TGG | + | chr3_3:86993044-86993063 | Msa0481190:CDS | 45.0% |
| TAGAAACAGGATCCAAGCCA+CGG | - | chr3_3:86993059-86993078 | None:intergenic | 45.0% | |
| AGAACGTAAACCTTTCAGCC+TGG | - | chr3_3:86993331-86993350 | None:intergenic | 45.0% | |
| AGTGCATTGTAGACAGGACA+TGG | + | chr3_3:86993505-86993524 | Msa0481190:intron | 45.0% | |
| AAGGGATATTGTTGGTACGC+AGG | + | chr3_3:86993668-86993687 | Msa0481190:CDS | 45.0% | |
| TGAGCTACATGACAAGTACC+TGG | + | chr3_3:86993791-86993810 | Msa0481190:CDS | 45.0% | |
| AACAGGAGTTCACATATGCC+AGG | - | chr3_3:86993812-86993831 | None:intergenic | 45.0% | |
| ! | GGCTCTTAAAGAGGCTTTTG+AGG | + | chr3_3:86993936-86993955 | Msa0481190:intron | 45.0% |
| !!! | TGTTTTGGTCTATCTGCAGG+TGG | + | chr3_3:86994207-86994226 | Msa0481190:intron | 45.0% |
| ACTTGTTTGCCGAGTTCTAC+AGG | + | chr3_3:86994260-86994279 | Msa0481190:CDS | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr3_3:86994345-86994364 | Msa0481190:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr3_3:86994346-86994365 | Msa0481190:intron | 45.0% |
| TTACCCCACTTAGTGGGATA+AGG | - | chr3_3:86994352-86994371 | None:intergenic | 45.0% | |
| CAAAACGTTACCCCACTTAG+TGG | - | chr3_3:86994359-86994378 | None:intergenic | 45.0% | |
| TGGCTTAAGCAAGTCTGCTT+TGG | - | chr3_3:86994728-86994747 | None:intergenic | 45.0% | |
| GAGAGGTTAGGGCTTAAAGT+TGG | - | chr3_3:86994771-86994790 | None:intergenic | 45.0% | |
| GACCATTCCTTCCATCTTTG+AGG | - | chr3_3:86995478-86995497 | None:intergenic | 45.0% | |
| CGTCAAATCTGTAACCTGGT+GGG | - | chr3_3:86995597-86995616 | None:intergenic | 45.0% | |
| TACAGATTTGACGCTGGCAA+AGG | + | chr3_3:86995604-86995623 | Msa0481190:CDS | 45.0% | |
| AATACTCCTAATGCAGACCC+TGG | + | chr3_3:86995659-86995678 | Msa0481190:CDS | 45.0% | |
| TCTATTCCAGGGTCTGCATT+AGG | - | chr3_3:86995668-86995687 | None:intergenic | 45.0% | |
| ! | ACAGTTACAGTTCTGACCAC+TGG | + | chr3_3:86995692-86995711 | Msa0481190:CDS | 45.0% |
| ATAACTAGGCCAGAAACCAG+TGG | - | chr3_3:86995711-86995730 | None:intergenic | 45.0% | |
| AATCCGCGGACATCACAAAA+TGG | - | chr3_3:86996079-86996098 | None:intergenic | 45.0% | |
| ! | GATGTCCGCGGATTTTCATA+TGG | + | chr3_3:86996085-86996104 | Msa0481190:intron | 45.0% |
| ! | CTCTTTACCGGACTTTTGAG+TGG | + | chr3_3:86996436-86996455 | Msa0481190:intron | 45.0% |
| TTGTGGATGTGTGCTCAAGT+TGG | + | chr3_3:86996991-86997010 | Msa0481190:three_prime_UTR | 45.0% | |
| TGTGGATGTGTGCTCAAGTT+GGG | + | chr3_3:86996992-86997011 | Msa0481190:three_prime_UTR | 45.0% | |
| !!! | ACTTTTTTTTTGGGGGGGTG+GGG | - | chr3_3:86997135-86997154 | None:intergenic | 45.0% |
| !!! | GTACTTTTTTTTTGGGGGGG+TGG | - | chr3_3:86997137-86997156 | None:intergenic | 45.0% |
| !! | AAAAAAATGTAATATAATTA+GGG | - | chr3_3:86991401-86991420 | None:intergenic | 5.0% |
| ! | AGGGAACCCTAGGTTGAAGA+AGG | - | chr3_3:86989295-86989314 | None:intergenic | 50.0% |
| GAAGGAAGGAAGGAAGGGTT+GGG | - | chr3_3:86989361-86989380 | None:intergenic | 50.0% | |
| TGAAGGAAGGAAGGAAGGGT+TGG | - | chr3_3:86989362-86989381 | None:intergenic | 50.0% | |
| TCAGGACTGAATTGAGGCTC+AGG | - | chr3_3:86989643-86989662 | None:intergenic | 50.0% | |
| GCCGCTGTATGACAAGTACA+AGG | + | chr3_3:86989851-86989870 | Msa0481190:CDS | 50.0% | |
| CACAAACACCGGGTATGACA+CGG | + | chr3_3:86989975-86989994 | Msa0481190:intron | 50.0% | |
| ! | GTTGGTGTCCGAACATGTGT+CGG | + | chr3_3:86990060-86990079 | Msa0481190:intron | 50.0% |
| TCTGGTGTCCGACACATGTT+CGG | - | chr3_3:86990071-86990090 | None:intergenic | 50.0% | |
| ACACCAGACACTCCTTCCAT+AGG | + | chr3_3:86990083-86990102 | Msa0481190:intron | 50.0% | |
| !! | CTTCCTATGGAAGGAGTGTC+TGG | - | chr3_3:86990089-86990108 | None:intergenic | 50.0% |
| ! | GCACTGACACTTCCTATGGA+AGG | - | chr3_3:86990098-86990117 | None:intergenic | 50.0% |
| !! | TGTGGCACTGACACTTCCTA+TGG | - | chr3_3:86990102-86990121 | None:intergenic | 50.0% |
| TTGTACAACCCTGACAGCTG+AGG | + | chr3_3:86990648-86990667 | Msa0481190:intron | 50.0% | |
| GCACAATTCCTCAGCTGTCA+GGG | - | chr3_3:86990659-86990678 | None:intergenic | 50.0% | |
| AGCACAATTCCTCAGCTGTC+AGG | - | chr3_3:86990660-86990679 | None:intergenic | 50.0% | |
| ! | GCTTCATATGCAGGTAGTGG+GGG | + | chr3_3:86990846-86990865 | Msa0481190:intron | 50.0% |
| TCATCGAACCCACGTAACGT+TGG | - | chr3_3:86991238-86991257 | None:intergenic | 50.0% | |
| TAAGAGGTGGAAGTGACCTC+CGG | - | chr3_3:86991899-86991918 | None:intergenic | 50.0% | |
| !! | GTTGGCTTGCTTCCGTGATT+TGG | + | chr3_3:86991929-86991948 | Msa0481190:CDS | 50.0% |
| !! | AGGCTGAGGAGTGCTTAAGA+CGG | + | chr3_3:86992554-86992573 | Msa0481190:intron | 50.0% |
| TTGGCTCACTACTAGAGTGC+AGG | - | chr3_3:86992603-86992622 | None:intergenic | 50.0% | |
| !! | GCTCCTTGAGAAAGAGCACT+CGG | + | chr3_3:86992869-86992888 | Msa0481190:CDS | 50.0% |
| !! | CTCCTTGAGAAAGAGCACTC+GGG | + | chr3_3:86992870-86992889 | Msa0481190:CDS | 50.0% |
| ATCCCGAGTGCTCTTTCTCA+AGG | - | chr3_3:86992875-86992894 | None:intergenic | 50.0% | |
| AGAAACAGGATCCAAGCCAC+GGG | - | chr3_3:86993058-86993077 | None:intergenic | 50.0% | |
| GCATGTTACCACTGAAGGCA+TGG | + | chr3_3:86993225-86993244 | Msa0481190:intron | 50.0% | |
| TATTGTTGGTACGCAGGAGC+AGG | + | chr3_3:86993674-86993693 | Msa0481190:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr3_3:86994347-86994366 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr3_3:86994344-86994363 | Msa0481190:intron | 50.0% |
| AGCGATTAGGTGAAAGGCCA+AGG | - | chr3_3:86994587-86994606 | None:intergenic | 50.0% | |
| GCGTCAAATCTGTAACCTGG+TGG | - | chr3_3:86995598-86995617 | None:intergenic | 50.0% | |
| CCAGCGTCAAATCTGTAACC+TGG | - | chr3_3:86995601-86995620 | None:intergenic | 50.0% | |
| CCAGGTTACAGATTTGACGC+TGG | + | chr3_3:86995598-86995617 | Msa0481190:intron | 50.0% | |
| !! | CAGTTCTGACCACTGGTTTC+TGG | + | chr3_3:86995699-86995718 | Msa0481190:CDS | 50.0% |
| !! | GCTTGTTGTCACAACCTACC+AGG | + | chr3_3:86995988-86996007 | Msa0481190:CDS | 50.0% |
| CACAGCACCACTCAAAAGTC+CGG | - | chr3_3:86996446-86996465 | None:intergenic | 50.0% | |
| GTAGATTCCTCTACCTCCTG+TGG | + | chr3_3:86996481-86996500 | Msa0481190:intron | 50.0% | |
| TTCTCATCCACAGGAGGTAG+AGG | - | chr3_3:86996491-86996510 | None:intergenic | 50.0% | |
| ! | GCGCACAATTGAGGCATCAA+TGG | - | chr3_3:86996555-86996574 | None:intergenic | 50.0% |
| TATGGAGTGCGTTGAGCAGT+TGG | + | chr3_3:86996616-86996635 | Msa0481190:CDS | 50.0% | |
| ATGGAGTGCGTTGAGCAGTT+GGG | + | chr3_3:86996617-86996636 | Msa0481190:CDS | 50.0% | |
| GCAGTTGGGTCGCATGTTTA+AGG | + | chr3_3:86996631-86996650 | Msa0481190:CDS | 50.0% | |
| !!! | TTTTTTTTTGGGGGGGTGGG+GGG | - | chr3_3:86997133-86997152 | None:intergenic | 50.0% |
| !!! | CTTTTTTTTTGGGGGGGTGG+GGG | - | chr3_3:86997134-86997153 | None:intergenic | 50.0% |
| GCGAGAATGAAGGGAACCCT+AGG | - | chr3_3:86989305-86989324 | None:intergenic | 55.0% | |
| CGATGTGTCCGTGTCATACC+CGG | - | chr3_3:86989986-86990005 | None:intergenic | 55.0% | |
| !! | AGGAAGTGTCAGTGCCACAG+AGG | + | chr3_3:86990103-86990122 | Msa0481190:intron | 55.0% |
| TGGACCGCTACTTCATTGCC+CGG | + | chr3_3:86991877-86991896 | Msa0481190:CDS | 55.0% | |
| ACCTCCGGGCAATGAAGTAG+CGG | - | chr3_3:86991884-86991903 | None:intergenic | 55.0% | |
| AAGAGGTGGAAGTGACCTCC+GGG | - | chr3_3:86991898-86991917 | None:intergenic | 55.0% | |
| !! | GGCTGAGGAGTGCTTAAGAC+GGG | + | chr3_3:86992555-86992574 | Msa0481190:intron | 55.0% |
| GAAACAGGATCCAAGCCACG+GGG | - | chr3_3:86993057-86993076 | None:intergenic | 55.0% | |
| ! | TACCACTGAAGGCATGGCGT+TGG | + | chr3_3:86993231-86993250 | Msa0481190:CDS | 55.0% |
| ! | TCAGGAAGAAGCTTGCTCGC+AGG | + | chr3_3:86995370-86995389 | Msa0481190:intron | 55.0% |
| !! | CGGACTTTTGAGTGGTGCTG+TGG | + | chr3_3:86996444-86996463 | Msa0481190:intron | 55.0% |
| !! | TGGTGAGGGTACCAATGAGC+TGG | - | chr3_3:86997044-86997063 | None:intergenic | 55.0% |
| !! | TAGTGGGGGAAGTGCCGTAG+TGG | + | chr3_3:86990860-86990879 | Msa0481190:intron | 60.0% |
| !! | AGTGGGGGAAGTGCCGTAGT+GGG | + | chr3_3:86990861-86990880 | Msa0481190:intron | 60.0% |
| ACCGCTACTTCATTGCCCGG+AGG | + | chr3_3:86991880-86991899 | Msa0481190:CDS | 60.0% | |
| CACCAACGCCATGCCTTCAG+TGG | - | chr3_3:86993236-86993255 | None:intergenic | 60.0% | |
| TCCAGTGCTGTGTACGTCCG+TGG | + | chr3_3:86994445-86994464 | Msa0481190:intron | 60.0% | |
| TCCACGGACGTACACAGCAC+TGG | - | chr3_3:86994449-86994468 | None:intergenic | 60.0% | |
| GGGGGGAGGGGTTAACAGAT+GGG | - | chr3_3:86997116-86997135 | None:intergenic | 60.0% | |
| TGGGGGGAGGGGTTAACAGA+TGG | - | chr3_3:86997117-86997136 | None:intergenic | 60.0% | |
| CACGGACACATCGACGCCGT+TGG | + | chr3_3:86989993-86990012 | Msa0481190:intron | 65.0% | |
| !! | TTTTTGGGGGGGTGGGGGGA+GGG | - | chr3_3:86997129-86997148 | None:intergenic | 65.0% |
| !!! | TTTTTTGGGGGGGTGGGGGG+AGG | - | chr3_3:86997130-86997149 | None:intergenic | 65.0% |
| !! | TTTTGGGGGGGTGGGGGGAG+GGG | - | chr3_3:86997128-86997147 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 86989233 | 86997381 | 86989233 | ID=Msa0481190;Name=Msa0481190 |
| chr3_3 | mRNA | 86989233 | 86997381 | 86989233 | ID=Msa0481190-mRNA-1;Parent=Msa0481190;Name=Msa0481190-mRNA-1;_AED=0.22;_eAED=0.22;_QI=141|1|1|1|0.94|0.9|20|525|744 |
| chr3_3 | exon | 86989233 | 86989341 | 86989233 | ID=Msa0481190-mRNA-1:exon:25206;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86989512 | 86989683 | 86989512 | ID=Msa0481190-mRNA-1:exon:25207;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86989803 | 86989902 | 86989803 | ID=Msa0481190-mRNA-1:exon:25208;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86991765 | 86991950 | 86991765 | ID=Msa0481190-mRNA-1:exon:25209;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86992134 | 86992181 | 86992134 | ID=Msa0481190-mRNA-1:exon:25210;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86992266 | 86992469 | 86992266 | ID=Msa0481190-mRNA-1:exon:25211;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86992556 | 86992633 | 86992556 | ID=Msa0481190-mRNA-1:exon:25212;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86992831 | 86992920 | 86992831 | ID=Msa0481190-mRNA-1:exon:25213;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86993012 | 86993092 | 86993012 | ID=Msa0481190-mRNA-1:exon:25214;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86993226 | 86993288 | 86993226 | ID=Msa0481190-mRNA-1:exon:25215;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86993660 | 86993695 | 86993660 | ID=Msa0481190-mRNA-1:exon:25216;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86993771 | 86993857 | 86993771 | ID=Msa0481190-mRNA-1:exon:25217;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86993937 | 86994086 | 86993937 | ID=Msa0481190-mRNA-1:exon:25218;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86994226 | 86994281 | 86994226 | ID=Msa0481190-mRNA-1:exon:25219;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86995374 | 86995494 | 86995374 | ID=Msa0481190-mRNA-1:exon:25220;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86995602 | 86995763 | 86995602 | ID=Msa0481190-mRNA-1:exon:25221;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86995866 | 86996009 | 86995866 | ID=Msa0481190-mRNA-1:exon:25222;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86996149 | 86996367 | 86996149 | ID=Msa0481190-mRNA-1:exon:25223;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86996485 | 86996652 | 86996485 | ID=Msa0481190-mRNA-1:exon:25224;Parent=Msa0481190-mRNA-1 |
| chr3_3 | exon | 86996755 | 86997381 | 86996755 | ID=Msa0481190-mRNA-1:exon:25225;Parent=Msa0481190-mRNA-1 |
| chr3_3 | five_prime_UTR | 86989233 | 86989341 | 86989233 | ID=Msa0481190-mRNA-1:five_prime_utr;Parent=Msa0481190-mRNA-1 |
| chr3_3 | five_prime_UTR | 86989512 | 86989543 | 86989512 | ID=Msa0481190-mRNA-1:five_prime_utr;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86989544 | 86989683 | 86989544 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86989803 | 86989902 | 86989803 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86991765 | 86991950 | 86991765 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86992134 | 86992181 | 86992134 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86992266 | 86992469 | 86992266 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86992556 | 86992633 | 86992556 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86992831 | 86992920 | 86992831 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86993012 | 86993092 | 86993012 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86993226 | 86993288 | 86993226 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86993660 | 86993695 | 86993660 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86993771 | 86993857 | 86993771 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86993937 | 86994086 | 86993937 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86994226 | 86994281 | 86994226 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86995374 | 86995494 | 86995374 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86995602 | 86995763 | 86995602 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86995866 | 86996009 | 86995866 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86996149 | 86996367 | 86996149 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86996485 | 86996652 | 86996485 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | CDS | 86996755 | 86996856 | 86996755 | ID=Msa0481190-mRNA-1:cds;Parent=Msa0481190-mRNA-1 |
| chr3_3 | three_prime_UTR | 86996857 | 86997381 | 86996857 | ID=Msa0481190-mRNA-1:three_prime_utr;Parent=Msa0481190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
