AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0482900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0482900 MtrunA17_Chr5g0412541 96.146 493 13 1 1 493 1 487 0.0 962
Msa0482900 MtrunA17_Chr3g0132531 67.480 492 156 2 3 491 5 495 0.0 654
Msa0482900 MtrunA17_Chr5g0412571 66.751 397 130 1 99 493 38 434 0.0 535
Msa0482900 MtrunA17_Chr7g0254511 50.531 471 231 2 18 488 6 474 3.64e-171 491
Msa0482900 MtrunA17_Chr7g0254521 50.549 455 224 1 35 489 24 477 2.28e-166 479
Msa0482900 MtrunA17_Chr8g0368001 48.796 457 233 1 35 491 43 498 7.61e-158 458
Msa0482900 MtrunA17_Chr4g0024501 45.142 494 254 3 2 494 39 516 2.19e-149 437
Msa0482900 MtrunA17_Chr2g0322671 45.547 494 251 4 16 493 12 503 1.30e-148 434
Msa0482900 MtrunA17_Chr1g0202761 45.657 495 256 4 12 495 2 494 1.23e-147 432
Msa0482900 MtrunA17_Chr5g0412771 47.495 459 240 1 34 492 48 505 1.33e-147 432
Msa0482900 MtrunA17_Chr6g0460541 52.141 397 188 2 99 495 3 397 3.28e-137 402
Msa0482900 MtrunA17_Chr7g0254531 51.671 389 187 1 101 489 1 388 2.43e-136 399
Msa0482900 MtrunA17_Chr1g0154441 50.904 387 189 1 101 487 1 386 2.87e-135 396
Msa0482900 MtrunA17_Chr3g0132541 55.255 333 148 1 1 333 1 332 9.46e-131 386
Msa0482900 MtrunA17_Chr3g0132541 48.276 87 44 1 406 492 350 435 2.63e-21 96.3
Msa0482900 MtrunA17_Chr2g0288281 49.744 390 194 2 101 489 1 389 5.28e-130 382
Msa0482900 MtrunA17_Chr7g0248051 48.366 459 235 2 34 492 62 518 3.29e-127 380
Msa0482900 MtrunA17_Chr6g0468531 40.289 484 280 4 14 493 2 480 4.75e-122 365
Msa0482900 MtrunA17_Chr6g0468521 38.254 481 293 4 14 493 2 479 4.47e-118 355
Msa0482900 MtrunA17_Chr5g0442331 41.213 478 270 4 19 486 14 490 2.38e-112 341
Msa0482900 MtrunA17_Chr6g0468511 37.370 479 296 4 14 491 2 477 6.84e-111 337
Msa0482900 MtrunA17_Chr7g0254501 50.165 303 149 2 186 488 2 302 3.94e-101 306
Msa0482900 MtrunA17_Chr1g0208791 37.209 473 284 6 14 480 16 481 4.53e-96 299
Msa0482900 MtrunA17_Chr6g0483361 36.752 468 289 5 22 484 4 469 2.60e-93 291
Msa0482900 MtrunA17_Chr6g0483381 36.538 468 288 6 16 480 6 467 3.42e-93 291
Msa0482900 MtrunA17_Chr6g0477961 36.900 458 284 4 26 480 12 467 1.60e-87 276
Msa0482900 MtrunA17_Chr6g0483331 34.430 456 292 5 33 486 7 457 6.00e-85 270
Msa0482900 MtrunA17_Chr8g0392601 35.153 458 292 3 30 486 3 456 1.49e-84 269
Msa0482900 MtrunA17_Chr6g0449061 33.547 468 308 3 25 490 13 479 3.48e-84 268
Msa0482900 MtrunA17_Chr1g0208821 34.110 472 300 6 18 481 12 480 3.17e-83 266
Msa0482900 MtrunA17_Chr6g0483341 33.991 456 294 5 33 486 36 486 1.07e-82 265
Msa0482900 MtrunA17_Chr7g0251331 32.914 477 311 4 27 495 4 479 7.26e-82 262
Msa0482900 MtrunA17_Chr2g0317131 35.158 475 294 6 10 475 7 476 4.85e-80 257
Msa0482900 MtrunA17_Chr1g0208881 33.891 478 313 3 20 495 2 478 2.27e-78 253
Msa0482900 MtrunA17_Chr6g0483351 37.795 381 233 3 101 478 1 380 1.25e-76 247
Msa0482900 MtrunA17_Chr1g0208891 34.681 470 302 4 27 494 8 474 7.16e-75 243
Msa0482900 MtrunA17_Chr2g0317151 35.484 465 290 4 13 475 10 466 8.36e-75 243
Msa0482900 MtrunA17_Chr6g0460531 46.586 249 131 2 31 278 13 260 6.08e-73 231
Msa0482900 MtrunA17_Chr2g0317161 34.286 455 295 3 24 475 11 464 1.44e-71 235
Msa0482900 MtrunA17_Chr2g0317171 32.979 470 299 5 17 475 6 470 1.07e-69 231
Msa0482900 MtrunA17_Chr2g0317221 36.990 392 234 5 98 481 7 393 1.54e-68 225
Msa0482900 MtrunA17_Chr6g0460521 51.142 219 106 1 277 495 1 218 5.42e-65 210
Msa0482900 MtrunA17_Chr7g0251321 32.817 387 239 3 101 486 1 367 6.90e-63 209
Msa0482900 MtrunA17_Chr6g0483161 31.783 387 239 4 99 482 1 365 2.67e-61 205
Msa0482900 MtrunA17_Chr1g0203791 30.128 468 322 4 16 481 39 503 8.08e-61 208
Msa0482900 MtrunA17_Chr5g0397991 29.932 441 305 3 43 481 66 504 9.57e-58 200
Msa0482900 MtrunA17_Chr6g0467321 29.461 482 320 5 18 481 11 490 3.43e-56 195
Msa0482900 MtrunA17_Chr8g0364761 34.356 326 199 5 1 312 1 325 5.47e-56 189
Msa0482900 MtrunA17_Chr5g0428251 25.737 509 362 6 1 495 1 507 1.21e-55 195
Msa0482900 MtrunA17_Chr5g0440661 34.748 377 180 7 101 475 1 313 5.35e-55 186
Msa0482900 MtrunA17_Chr6g0473701 27.912 455 325 3 43 495 129 582 4.92e-53 189
Msa0482900 MtrunA17_Chr3g0140931 27.176 471 325 6 27 486 31 494 3.24e-52 185
Msa0482900 MtrunA17_Chr8g0389801 28.507 442 310 4 43 482 24 461 7.75e-49 174
Msa0482900 MtrunA17_Chr4g0013031 25.764 458 329 5 43 494 67 519 1.32e-45 167
Msa0482900 MtrunA17_Chr8g0364751 48.795 166 84 1 315 480 7 171 3.97e-40 143
Msa0482900 MtrunA17_Chr7g0254491 55.856 111 49 0 18 128 6 116 1.38e-37 134
Msa0482900 MtrunA17_Chr2g0295631 25.439 456 322 5 43 481 21 475 9.15e-37 142
Msa0482900 MtrunA17_Chr6g0483264 33.816 207 132 2 280 484 1 204 2.68e-34 128
Msa0482900 MtrunA17_Chr5g0412561 57.143 98 36 1 1 98 1 92 6.74e-30 112
Msa0482900 MtrunA17_Chr5g0442311 35.754 179 114 1 101 278 1 179 9.62e-29 112
Msa0482900 MtrunA17_Chr6g0487091 27.667 300 214 2 186 485 97 393 9.89e-28 115
Msa0482900 MtrunA17_Chr6g0483241 35.912 181 115 1 99 278 1 181 3.57e-26 105
Msa0482900 MtrunA17_Chr5g0398571 30.415 217 150 1 266 482 72 287 1.61e-22 98.2
Msa0482900 MtrunA17_Chr6g0483221 32.468 154 103 1 323 476 2 154 3.69e-21 90.9
Msa0482900 MtrunA17_Chr6g0483261 32.317 164 106 2 323 484 2 162 5.29e-21 90.5
Msa0482900 MtrunA17_Chr1g0154451 42.105 76 44 0 24 99 17 92 5.36e-16 73.6
Msa0482900 MtrunA17_Chr6g0460551 44.737 76 41 1 24 98 18 93 2.53e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0482900 AT5G65380.1 71.548 478 131 1 12 489 11 483 0.0 695
Msa0482900 AT5G44050.1 63.786 486 171 1 3 488 5 485 0.0 635
Msa0482900 AT5G10420.1 67.227 476 150 1 12 487 13 482 0.0 629
Msa0482900 AT1G33110.1 50.734 477 232 2 11 487 6 479 2.57e-169 487
Msa0482900 AT1G33100.1 50.000 482 236 2 18 495 8 488 8.09e-168 483
Msa0482900 AT1G33090.1 49.595 494 242 3 6 495 1 491 3.73e-165 476
Msa0482900 AT1G47530.1 47.718 482 251 1 12 493 4 484 2.02e-164 474
Msa0482900 AT1G33080.1 49.495 495 240 4 6 494 1 491 1.94e-161 467
Msa0482900 AT1G33080.2 50.628 478 231 3 6 482 1 474 2.26e-160 464
Msa0482900 AT3G21690.1 47.976 494 240 3 2 494 26 503 1.81e-152 444
Msa0482900 AT1G61890.1 45.363 496 266 4 2 494 5 498 2.15e-152 444
Msa0482900 AT4G25640.1 50.725 483 231 4 12 491 2 480 5.68e-151 440
Msa0482900 AT3G26590.1 47.921 457 237 1 38 494 40 495 1.97e-150 439
Msa0482900 AT4G25640.2 50.725 483 231 4 12 491 2 480 2.62e-150 439
Msa0482900 AT1G11670.1 45.766 496 254 5 13 494 7 501 2.65e-149 436
Msa0482900 AT1G12950.1 47.903 453 235 1 35 487 59 510 1.46e-147 432
Msa0482900 AT5G38030.1 48.775 449 229 1 42 490 44 491 1.56e-147 432
Msa0482900 AT1G61890.2 45.833 480 255 4 2 478 5 482 5.25e-147 430
Msa0482900 AT4G00350.1 49.119 454 229 2 42 495 87 538 5.43e-146 429
Msa0482900 AT1G23300.1 44.758 496 255 3 18 495 4 498 2.54e-140 414
Msa0482900 AT4G25640.3 51.826 438 205 3 12 446 2 436 7.64e-140 411
Msa0482900 AT1G33110.2 51.500 400 192 1 11 410 6 403 7.49e-138 403
Msa0482900 AT1G47530.2 49.873 393 196 1 101 493 1 392 1.02e-137 402
Msa0482900 AT1G61890.3 44.619 446 243 3 2 444 5 449 9.60e-131 388
Msa0482900 AT4G21910.3 42.744 503 274 7 1 494 8 505 7.84e-130 387
Msa0482900 AT4G21910.1 42.744 503 274 7 1 494 8 505 7.84e-130 387
Msa0482900 AT4G21910.2 43.028 502 268 7 5 494 12 507 3.37e-129 385
Msa0482900 AT4G21910.4 43.028 502 268 7 5 494 12 507 3.37e-129 385
Msa0482900 AT3G26590.2 47.342 395 207 1 101 495 1 394 4.83e-124 368
Msa0482900 AT3G03620.2 41.775 462 268 1 27 488 21 481 2.56e-123 370
Msa0482900 AT3G03620.1 41.775 462 268 1 27 488 21 481 2.56e-123 370
Msa0482900 AT5G17700.2 40.167 478 281 2 11 488 6 478 4.65e-123 369
Msa0482900 AT5G17700.1 40.167 478 281 2 11 488 6 478 4.65e-123 369
Msa0482900 AT4G21903.1 44.186 430 235 4 64 491 74 500 1.63e-120 363
Msa0482900 AT3G59030.1 39.321 501 285 5 12 495 5 503 2.77e-117 354
Msa0482900 AT4G21903.2 43.981 432 234 5 64 493 74 499 3.11e-116 352
Msa0482900 AT4G21903.3 44.275 393 215 3 101 491 1 391 4.38e-112 337
Msa0482900 AT5G17700.3 38.750 400 241 1 11 410 6 401 9.43e-95 293
Msa0482900 AT5G52450.1 37.975 474 285 3 27 492 3 475 8.47e-92 288
Msa0482900 AT1G71140.1 35.129 464 294 4 23 484 9 467 1.18e-89 283
Msa0482900 AT3G59030.2 38.015 413 238 4 12 407 5 416 7.90e-88 276
Msa0482900 AT2G04040.1 34.454 476 306 3 16 490 4 474 3.63e-87 276
Msa0482900 AT2G04050.1 35.158 475 301 3 17 490 6 474 2.49e-86 274
Msa0482900 AT2G04080.1 33.619 467 302 3 30 489 8 473 2.83e-86 273
Msa0482900 AT1G66780.1 34.519 478 308 4 11 486 4 478 2.58e-85 271
Msa0482900 AT2G34360.1 36.501 463 284 5 32 492 16 470 8.55e-85 270
Msa0482900 AT1G64820.1 32.895 456 299 3 45 494 31 485 1.32e-84 270
Msa0482900 AT1G73700.1 37.229 462 287 3 31 491 13 472 4.87e-83 265
Msa0482900 AT1G15150.1 34.395 471 297 5 20 481 2 469 4.27e-82 263
Msa0482900 AT2G04080.2 33.114 456 297 3 30 478 8 462 1.06e-81 261
Msa0482900 AT1G15160.1 34.322 472 296 6 20 481 2 469 1.11e-80 259
Msa0482900 AT1G15170.1 35.666 443 279 4 42 481 33 472 5.20e-80 257
Msa0482900 AT2G04070.1 32.762 467 306 3 30 489 8 473 8.00e-80 257
Msa0482900 AT1G66760.2 32.898 459 306 2 27 484 12 469 4.98e-79 255
Msa0482900 AT3G23560.1 34.105 475 304 6 6 475 1 471 9.26e-77 249
Msa0482900 AT1G66760.1 32.594 451 302 2 27 476 12 461 1.09e-76 248
Msa0482900 AT2G04100.1 34.685 444 286 4 43 484 30 471 9.12e-75 244
Msa0482900 AT2G04090.1 34.009 444 289 4 43 484 30 471 1.10e-74 243
Msa0482900 AT3G23550.1 34.707 461 294 5 19 475 6 463 1.62e-74 243
Msa0482900 AT2G34360.2 33.117 462 259 3 32 492 16 428 2.84e-72 236
Msa0482900 AT2G04100.2 34.247 438 284 4 43 478 30 465 6.42e-72 236
Msa0482900 AT1G15180.1 34.382 445 280 6 43 481 35 473 1.24e-71 236
Msa0482900 AT1G15170.2 35.328 351 225 2 132 481 4 353 1.05e-65 216
Msa0482900 AT1G15150.2 36.254 331 209 2 152 481 24 353 1.37e-64 214
Msa0482900 AT3G23560.2 33.415 407 263 5 6 407 1 404 5.74e-62 208
Msa0482900 AT1G66760.4 30.628 382 264 1 27 407 12 393 9.50e-56 191
Msa0482900 AT2G38510.1 26.201 458 333 4 39 493 2 457 1.78e-53 187
Msa0482900 AT1G58340.1 28.358 469 324 4 24 481 29 496 8.84e-53 187
Msa0482900 AT1G66760.3 33.533 334 220 2 144 476 1 333 1.10e-51 179
Msa0482900 AT4G29140.1 26.964 471 336 4 17 481 26 494 7.53e-50 179
Msa0482900 AT1G71870.1 26.680 491 330 5 28 491 2 489 8.40e-50 178
Msa0482900 AT5G49130.1 27.824 478 316 7 28 480 4 477 1.28e-43 161
Msa0482900 AT1G15180.2 33.818 275 177 2 136 407 8 280 9.14e-43 157
Msa0482900 AT5G19700.1 25.738 474 347 3 12 481 2 474 3.43e-42 157
Msa0482900 AT5G52050.1 26.593 455 316 4 43 485 35 483 8.72e-40 150
Msa0482900 AT4G23030.1 27.557 479 337 6 20 493 10 483 2.21e-39 149
Msa0482900 AT4G22790.1 27.215 474 328 7 23 482 1 471 1.59e-37 144
Msa0482900 AT2G04066.1 36.641 131 82 1 359 489 39 168 1.23e-21 92.4

Find 131 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGAACAATCAGGGAATT+TGG 0.082298 3_3:-90502484 Msa0482900:intron
CATCATTTCCAATCCATTTA+TGG 0.149216 3_3:+90505368 None:intergenic
ATATGTTGCATATATAAATT+TGG 0.152772 3_3:-90502673 Msa0482900:CDS
ATGCTTTGTGTTTGCTAAAA+TGG 0.153610 3_3:-90501496 Msa0482900:three_prime_UTR
ATGATATTTCATGATAAATT+TGG 0.166736 3_3:-90502956 Msa0482900:CDS
TTTGGCAGCATGACCATAAA+TGG 0.192543 3_3:-90505381 Msa0482900:intron
ATTCCAATTCCTGTCCATTT+TGG 0.208921 3_3:+90501776 None:intergenic
GGTGTCTTTGTTTGCACTTT+TGG 0.215703 3_3:-90506047 Msa0482900:CDS
TGATTCATTAAAATTTATAT+TGG 0.253693 3_3:+90501606 None:intergenic
GGAGGGGACTCTTCCGGTTT+AGG 0.254654 3_3:-90501356 Msa0482900:three_prime_UTR
GTTGTTGTTGGCTTTGATTT+TGG 0.254896 3_3:-90506858 Msa0482900:CDS
AAAGCCAACAACAACATTAT+TGG 0.266029 3_3:+90506866 None:intergenic
AAGTTTCAGTTTGGTGTTAT+TGG 0.271515 3_3:-90505992 Msa0482900:CDS
GTTTCTCTTCGTAACCAAAA+TGG 0.272483 3_3:-90501790 Msa0482900:three_prime_UTR
GGAACCTTTGTTTCTCCTAA+TGG 0.298176 3_3:+90507098 None:intergenic
TTGGCATTCTTTGCTGCAAC+AGG 0.306988 3_3:-90505339 Msa0482900:CDS
CTTTATGTGGACAAGCATTT+GGG 0.309203 3_3:-90506321 Msa0482900:CDS
TGGGGTGCTACTATGTGATT+GGG 0.309511 3_3:-90502653 Msa0482900:CDS
TATGTTGCATATATAAATTT+GGG 0.317640 3_3:-90502672 Msa0482900:CDS
ACTTTATGTGGACAAGCATT+TGG 0.320119 3_3:-90506322 Msa0482900:CDS
GTGTTGACATCATTAATAAT+TGG 0.329181 3_3:-90503001 Msa0482900:CDS
TAACCAAAATGGACAGGAAT+TGG 0.330744 3_3:-90501779 Msa0482900:three_prime_UTR
GTCATCACTCAAGCCTTTGC+TGG 0.335274 3_3:-90506927 Msa0482900:CDS
GTACTTTGATCAAGGTGTTA+TGG 0.350047 3_3:-90502604 Msa0482900:intron
CATTTCAATTTCCTCTCAAT+AGG 0.354802 3_3:-90506108 Msa0482900:CDS
ATTGAACAATCAGGGAATTT+GGG 0.355384 3_3:-90502483 Msa0482900:intron
CTCTGCATTTGGAAGATTCC+CGG 0.355831 3_3:+90505599 None:intergenic
ACACCAGTGTTAAGACTATT+AGG 0.356484 3_3:-90506202 Msa0482900:CDS
GTGTTTGCAGTTTGGAGAAT+TGG 0.372486 3_3:-90505647 Msa0482900:intron
CAAGCCTTTGCTGGTCATCT+TGG 0.373616 3_3:-90506918 Msa0482900:CDS
AACGAGCTTGGAGCTGGAAA+TGG 0.377224 3_3:-90503055 Msa0482900:CDS
ATAAGATACATAAGGGTCAT+TGG 0.379417 3_3:+90507400 None:intergenic
AATAAGTAATTATATAGTTT+CGG 0.379999 3_3:+90501730 None:intergenic
ACAGGAGTGGCAGTTGGATC+AGG 0.380803 3_3:-90502705 Msa0482900:intron
ATAGCCAATAATGTTGTTGT+TGG 0.383111 3_3:-90506870 Msa0482900:CDS
CTTCTTCATTTGTTGTTGAA+AGG 0.384585 3_3:+90507057 None:intergenic
TACTTTGAATTTCTCTTGGT+GGG 0.385946 3_3:-90505960 Msa0482900:CDS
TATGTGATTGGGGTTCCTCT+TGG 0.387599 3_3:-90502642 Msa0482900:CDS
TTCATTTCATTTGTGTAAAG+TGG 0.388359 3_3:+90507271 None:intergenic
TTGGGGTGCTACTATGTGAT+TGG 0.389517 3_3:-90502654 Msa0482900:CDS
AAGATCTTACAAGAAAGGTT+TGG 0.390687 3_3:-90507022 Msa0482900:CDS
GTAGTGGTGAAACCTTATAT+TGG 0.392550 3_3:+90501564 None:intergenic
CTGCTACTTTGAATTTCTCT+TGG 0.393156 3_3:-90505964 Msa0482900:CDS
GGTTGTCCTTTGACTTGGAA+TGG 0.398596 3_3:-90505899 Msa0482900:CDS
AAGGAACTAGCTTCACCATT+AGG 0.405298 3_3:-90507113 Msa0482900:CDS
TCTACTGCAATCTCTGCATT+TGG 0.407992 3_3:+90505588 None:intergenic
TTGCTTACTTCATCAAGAAC+AGG 0.408507 3_3:+90502911 None:intergenic
GCAATACGGCTGAAAATTGC+AGG 0.410342 3_3:+90506966 None:intergenic
TTAACACTGGTGTTGCAAAA+AGG 0.411616 3_3:+90506212 None:intergenic
TTTGTGTTTAAGTTTCAGTT+TGG 0.413202 3_3:-90506001 Msa0482900:CDS
TCTTGGTGGGCCCTTACTGT+AGG 0.416107 3_3:-90505947 Msa0482900:CDS
TAAAGGAAATTGGTATTTGT+CGG 0.417211 3_3:+90507298 None:intergenic
CCAACTTTGAACGTTGATAC+AGG 0.428089 3_3:-90501464 Msa0482900:intron
TGGAGATAGCTGCAAGTTCA+AGG 0.433601 3_3:+90506892 None:intergenic
CTTGGTGGGCCCTTACTGTA+GGG 0.435342 3_3:-90505946 Msa0482900:CDS
CTACTTTGAATTTCTCTTGG+TGG 0.441026 3_3:-90505961 Msa0482900:CDS
GTTAAACTTTCCGCTGCCTC+TGG 0.445226 3_3:-90505839 Msa0482900:CDS
AACAATCAGGGAATTTGGGC+AGG 0.448124 3_3:-90502479 Msa0482900:intron
GTTGTCCTTTGACTTGGAAT+GGG 0.452285 3_3:-90505898 Msa0482900:CDS
AGCAAGGGAGGGGACTCTTC+CGG 0.453267 3_3:-90501362 Msa0482900:three_prime_UTR
TTGAAAGATAACTCCTAAAC+CGG 0.454311 3_3:+90501343 None:intergenic
GTGAGGGTTGCGAACGAGCT+TGG 0.454317 3_3:-90503067 Msa0482900:CDS
TCAAAACAGCTGCTATAGCT+TGG 0.455675 3_3:-90506069 Msa0482900:CDS
ATGGGTTGGTACTTTGATCA+AGG 0.460800 3_3:-90502612 Msa0482900:CDS
TGATTACACTTCGATGTGAC+TGG 0.464201 3_3:-90502412 Msa0482900:CDS
ACAACAAGATCTTACAAGAA+AGG 0.464741 3_3:-90507027 Msa0482900:CDS
GATACATAAGGGTCATTGGT+TGG 0.475509 3_3:+90507404 None:intergenic
AGTGTCCAACCAGTTCTATC+AGG 0.477923 3_3:-90502851 Msa0482900:intron
CAAAACAGCTGCTATAGCTT+GGG 0.478697 3_3:-90506068 Msa0482900:CDS
ATACATAAGGGTCATTGGTT+GGG 0.480882 3_3:+90507405 None:intergenic
CAGTAGATGCTCTATCCATA+TGG 0.485783 3_3:-90505572 Msa0482900:intron
GAGGATTTAGCTGTATTAGC+AGG 0.486677 3_3:-90506172 Msa0482900:CDS
ACGAGCTTGGAGCTGGAAAT+GGG 0.487333 3_3:-90503054 Msa0482900:CDS
CAGCATGACCATAAATGGAT+TGG 0.488657 3_3:-90505376 Msa0482900:CDS
TTTGACATAGCTAGCTAGCT+AGG 0.490208 3_3:+90507137 None:intergenic
CCTGTATCAACGTTCAAAGT+TGG 0.492740 3_3:+90501464 None:intergenic
AACAACAACATTATTGGCTA+TGG 0.493786 3_3:+90506872 None:intergenic
GAGTATACATGCAACGATCA+TGG 0.494023 3_3:-90506276 Msa0482900:CDS
GTTGCGAACGAGCTTGGAGC+TGG 0.496563 3_3:-90503061 Msa0482900:CDS
CAATTATCGCAGCAAGGGAG+GGG 0.505227 3_3:-90501372 Msa0482900:intron
GCTAATACAGCTAAATCCTC+TGG 0.507120 3_3:+90506175 None:intergenic
GAATTGGAATATAGTTGTAC+CGG 0.509234 3_3:-90501763 Msa0482900:three_prime_UTR
ATGGTGGTTGTCCTTTGACT+TGG 0.509287 3_3:-90505904 Msa0482900:CDS
TCTTCGTAACCAAAATGGAC+AGG 0.512941 3_3:-90501785 Msa0482900:three_prime_UTR
GAGAAGAATGAATGATTGAA+AGG 0.513835 3_3:+90507242 None:intergenic
AGAATTCTGATATTAATGAC+CGG 0.518999 3_3:-90505618 Msa0482900:CDS
TATTGCATCTTATATGATGT+TGG 0.521138 3_3:-90506949 Msa0482900:CDS
ACCACTACTCAAAACAATGC+TGG 0.527239 3_3:-90501549 Msa0482900:three_prime_UTR
GATTACACTTCGATGTGACT+GGG 0.531809 3_3:-90502411 Msa0482900:CDS
AAGAAGCTATGGCATATAGT+TGG 0.539413 3_3:-90506990 Msa0482900:CDS
TTCAATTATCGCAGCAAGGG+AGG 0.540992 3_3:-90501374 Msa0482900:intron
CTGCCTCTGGTGTTATGCTA+TGG 0.550554 3_3:-90505826 Msa0482900:intron
GGATTGAATCAAAGAAGCTA+TGG 0.551849 3_3:-90507001 Msa0482900:CDS
GAAAACCCATTCCAAGTCAA+AGG 0.554920 3_3:+90505893 None:intergenic
GTCTTCGTGCGTGAAGCACG+AGG 0.556024 3_3:+90507159 None:intergenic
TCAATTATCGCAGCAAGGGA+GGG 0.556735 3_3:-90501373 Msa0482900:intron
ACATCATATAAGATGCAATA+CGG 0.556883 3_3:+90506952 None:intergenic
AGTGCATTAGAAACTTTATG+TGG 0.558471 3_3:-90506334 Msa0482900:CDS
TCGATGTGACTGGGATAAAG+AGG 0.564509 3_3:-90502402 Msa0482900:intron
AATGCAAATGCAAAATGTAA+TGG 0.565961 3_3:+90506127 None:intergenic
ATTGGAAATGATGATTCCAT+TGG 0.569223 3_3:-90505358 Msa0482900:CDS
CAGGAGTGGCAGTTGGATCA+GGG 0.584251 3_3:-90502704 Msa0482900:CDS
CAAAATTACATATTACAAAG+TGG 0.585830 3_3:-90501841 Msa0482900:CDS
CTAGCTAGCTATGTCAAACA+AGG 0.586888 3_3:-90507132 Msa0482900:exon
CTTGGAGCTGGAAATGGGAA+AGG 0.591530 3_3:-90503049 Msa0482900:CDS
TAGCATAACACCAGAGGCAG+CGG 0.592627 3_3:+90505829 None:intergenic
CGTGCGTGAAGCACGAGGGG+TGG 0.598892 3_3:+90507164 None:intergenic
GTTGCAGCAAAGAATGCCAA+TGG 0.599020 3_3:+90505342 None:intergenic
GAATTCTGATATTAATGACC+GGG 0.599099 3_3:-90505617 Msa0482900:CDS
TAGTTTCGGTGAATAAAGCC+CGG 0.599390 3_3:+90501744 None:intergenic
CTTCGTGCGTGAAGCACGAG+GGG 0.601792 3_3:+90507161 None:intergenic
TTCACCATTAGGAGAAACAA+AGG 0.605480 3_3:-90507102 Msa0482900:CDS
ATACAGCTAAATCCTCTGGT+TGG 0.606573 3_3:+90506179 None:intergenic
TGGCATTCTTTGCTGCAACA+GGG 0.606678 3_3:-90505338 Msa0482900:intron
GGGGTGCTACTATGTGATTG+GGG 0.607925 3_3:-90502652 Msa0482900:CDS
ACAATCAGGGAATTTGGGCA+GGG 0.620313 3_3:-90502478 Msa0482900:intron
TCTTCGTGCGTGAAGCACGA+GGG 0.625590 3_3:+90507160 None:intergenic
GTCACCAAGATGACCAGCAA+AGG 0.626204 3_3:+90506914 None:intergenic
AATTGGAATATAGTTGTACC+GGG 0.632591 3_3:-90501762 Msa0482900:three_prime_UTR
TTTATGTGGACAAGCATTTG+GGG 0.634530 3_3:-90506320 Msa0482900:CDS
CTTTGTAAGAACCTATTGAG+AGG 0.635159 3_3:+90506097 None:intergenic
AAGGTGATACCTGATAGAAC+TGG 0.635963 3_3:+90502842 None:intergenic
ATGTTGCATATATAAATTTG+GGG 0.642041 3_3:-90502671 Msa0482900:CDS
TGATACCTGATAGAACTGGT+TGG 0.654416 3_3:+90502846 None:intergenic
AATGCAATATTGCAGAGTGA+GGG 0.655281 3_3:-90503083 Msa0482900:intron
TAGCAGGACAAGTTTCAATG+TGG 0.666285 3_3:-90506156 Msa0482900:CDS
CAATACGGCTGAAAATTGCA+GGG 0.673085 3_3:+90506967 None:intergenic
AAGACTATTAGGCCAACCAG+AGG 0.675892 3_3:-90506191 Msa0482900:CDS
TGGCCTAATAGTCTTAACAC+TGG 0.681651 3_3:+90506199 None:intergenic
TTACCATAGCATAACACCAG+AGG 0.718543 3_3:+90505823 None:intergenic
GAGTGGCAGTTGGATCAGGG+TGG 0.748537 3_3:-90502701 Msa0482900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTTTTTTGTTTTTGAA+AGG - chr3_3:90501397-90501416 Msa0482900:intron 10.0%
!! TACAAAAATAAAGTATAAAT+TGG + chr3_3:90502008-90502027 None:intergenic 10.0%
!! CTTAAATATAAAAAAAATGA+AGG - chr3_3:90503520-90503539 Msa0482900:intron 10.0%
!!! TTATTGGTATTTTTTTTTTT+TGG + chr3_3:90503787-90503806 None:intergenic 10.0%
!! AAAAAAAAAAAATACCAATA+AGG - chr3_3:90503786-90503805 Msa0482900:intron 10.0%
!!! TATTAATTTATGATTTTCTT+GGG + chr3_3:90504405-90504424 None:intergenic 10.0%
!!! TTATTAATTTATGATTTTCT+TGG + chr3_3:90504406-90504425 None:intergenic 10.0%
!!! ATTGAAAATAATACTTTTTT+AGG - chr3_3:90505421-90505440 Msa0482900:intron 10.0%
!!! TTGAAAATAATACTTTTTTA+GGG - chr3_3:90505422-90505441 Msa0482900:intron 10.0%
!!! TAAAGTTTTTTTTTTTTTGA+AGG - chr3_3:90506402-90506421 Msa0482900:intron 10.0%
!! AATAAGTAATTATATAGTTT+CGG + chr3_3:90507016-90507035 None:intergenic 10.0%
!!! ATATAATTACTTATTTTTGA+AGG - chr3_3:90507021-90507040 Msa0482900:CDS 10.0%
!!! TATAATTACTTATTTTTGAA+GGG - chr3_3:90507022-90507041 Msa0482900:CDS 10.0%
!! TGATTCATTAAAATTTATAT+TGG + chr3_3:90507140-90507159 None:intergenic 10.0%
!!! AATATAAATTTTAATGAATC+AGG - chr3_3:90507139-90507158 Msa0482900:exon 10.0%
!!! TTATATTGGATTTTAAAAAT+GGG + chr3_3:90507168-90507187 None:intergenic 10.0%
!!! TCTTTTAATAAGATACATAA+GGG + chr3_3:90501353-90501372 None:intergenic 15.0%
!!! TTCTTTTAATAAGATACATA+AGG + chr3_3:90501354-90501373 None:intergenic 15.0%
!! TTAACAATTAAATTACCATA+TGG + chr3_3:90503189-90503208 None:intergenic 15.0%
!!! GTTTTTTTTTAAAACCTTAT+TGG + chr3_3:90503803-90503822 None:intergenic 15.0%
!!! TATATATGTTTTTCTTTTTC+AGG + chr3_3:90503835-90503854 None:intergenic 15.0%
!! TGAAAAAGAAAAACATATAT+AGG - chr3_3:90503834-90503853 Msa0482900:intron 15.0%
!! TTATGAAAGTAAAATATGAA+TGG - chr3_3:90503907-90503926 Msa0482900:intron 15.0%
!! AAAACTCAATAATATACATA+AGG + chr3_3:90504122-90504141 None:intergenic 15.0%
!!! TCTAAAATAATAAATTTGTC+CGG - chr3_3:90504291-90504310 Msa0482900:intron 15.0%
!! TCTAAATTAATAAATTTCTC+CGG - chr3_3:90504690-90504709 Msa0482900:intron 15.0%
!! TTGAATATGTCAAATAAAAT+TGG + chr3_3:90504792-90504811 None:intergenic 15.0%
!! AATTGAGTAATCAATAAATT+TGG + chr3_3:90504990-90505009 None:intergenic 15.0%
!!! AATTTATTGATTACTCAATT+TGG - chr3_3:90504990-90505009 Msa0482900:intron 15.0%
!! TTTATAAATAATACCTATTG+AGG - chr3_3:90505095-90505114 Msa0482900:intron 15.0%
!! AAAAGAAAAACATTGTAATT+AGG + chr3_3:90505377-90505396 None:intergenic 15.0%
!!! TTTTCAATAAAAAGTTTGTT+TGG + chr3_3:90505409-90505428 None:intergenic 15.0%
!! AAAAGAAAAAGAAAATTGTT+AGG + chr3_3:90505491-90505510 None:intergenic 15.0%
!! ATGATATTTCATGATAAATT+TGG - chr3_3:90505787-90505806 Msa0482900:intron 15.0%
!!! ATTTGAAATGTTAATTGTTA+AGG + chr3_3:90505923-90505942 None:intergenic 15.0%
!! ATATGTTGCATATATAAATT+TGG - chr3_3:90506070-90506089 Msa0482900:CDS 15.0%
!! TATGTTGCATATATAAATTT+GGG - chr3_3:90506071-90506090 Msa0482900:CDS 15.0%
!!! ACTTTAAAAAGTTGAATAAA+TGG + chr3_3:90506388-90506407 None:intergenic 15.0%
!!! AAGAAGTTTTTTTTTTTTGA+AGG + chr3_3:90506611-90506630 None:intergenic 15.0%
!! AAACTAAATCTATAATGTTT+AGG + chr3_3:90506691-90506710 None:intergenic 15.0%
!!! CTTATATTGGATTTTAAAAA+TGG + chr3_3:90507169-90507188 None:intergenic 15.0%
!!! CATTTTTAAAATCCAATATA+AGG - chr3_3:90507167-90507186 Msa0482900:five_prime_UTR 15.0%
!!! ATTTTTTCCTTCACTTTTTT+TGG - chr3_3:90501530-90501549 Msa0482900:three_prime_UTR 20.0%
!!! TTTTTTCCTTCACTTTTTTT+GGG - chr3_3:90501531-90501550 Msa0482900:three_prime_UTR 20.0%
!!! GAAGTACTAGTATATTATAA+TGG + chr3_3:90501943-90501962 None:intergenic 20.0%
!! TCAAATTCTACATTGAAATA+TGG + chr3_3:90502158-90502177 None:intergenic 20.0%
!! ATTAGTTCAATAGTAGAAAA+AGG + chr3_3:90502352-90502371 None:intergenic 20.0%
!!! TGTTTTATGATTTTTCAGTT+AGG - chr3_3:90502379-90502398 Msa0482900:intron 20.0%
!! CATATGGACAATATTAAAAA+TGG + chr3_3:90503269-90503288 None:intergenic 20.0%
!!! CATTTTTAATATTGTCCATA+TGG - chr3_3:90503267-90503286 Msa0482900:intron 20.0%
!! TAAAAACAACAATGATAAGT+TGG + chr3_3:90503302-90503321 None:intergenic 20.0%
!!! TCTCATTATGTTTTTTCTTT+GGG + chr3_3:90503589-90503608 None:intergenic 20.0%
!! GCAAAAATACAAATAAAACA+CGG - chr3_3:90503724-90503743 Msa0482900:intron 20.0%
!! TAGTATGAAGAATTATAAAG+TGG + chr3_3:90504029-90504048 None:intergenic 20.0%
!!! TATATTATTGAGTTTTGTGA+TGG - chr3_3:90504126-90504145 Msa0482900:intron 20.0%
!!! AGACTCTTTAATTTAATACT+CGG - chr3_3:90504253-90504272 Msa0482900:intron 20.0%
!!! AGTTTTTCAATTTTTTGCAT+TGG + chr3_3:90504329-90504348 None:intergenic 20.0%
!! CTCTATAAATTAATAATGTC+AGG + chr3_3:90504717-90504736 None:intergenic 20.0%
!! AACTGTAATTATATACTTGA+CGG - chr3_3:90504741-90504760 Msa0482900:intron 20.0%
!! AATATGTCAAATAAAATTGG+TGG + chr3_3:90504789-90504808 None:intergenic 20.0%
!! TTCTAGTGAATACTATTTAA+TGG + chr3_3:90504870-90504889 None:intergenic 20.0%
!!! TTTTCTGCTTCAAAAAATTA+TGG + chr3_3:90504916-90504935 None:intergenic 20.0%
!! TAATCAATAAATTTGGTCAT+AGG + chr3_3:90504983-90505002 None:intergenic 20.0%
!! TATATGATATATTCCTCAAT+AGG + chr3_3:90505111-90505130 None:intergenic 20.0%
!!! GTCACAATTTTTTTTTTTCA+AGG - chr3_3:90505161-90505180 Msa0482900:intron 20.0%
!! ATGTTGCATATATAAATTTG+GGG - chr3_3:90506072-90506091 Msa0482900:CDS 20.0%
!! TTACTAGAATGTAAACTAAT+TGG - chr3_3:90506230-90506249 Msa0482900:CDS 20.0%
!!! ATTTTATTTCATCATTGTGT+TGG - chr3_3:90506857-90506876 Msa0482900:CDS 20.0%
!! CAAAATTACATATTACAAAG+TGG - chr3_3:90506902-90506921 Msa0482900:CDS 20.0%
! TAAAGGAAATTGGTATTTGT+CGG + chr3_3:90501448-90501467 None:intergenic 25.0%
! TTCATTTCATTTGTGTAAAG+TGG + chr3_3:90501475-90501494 None:intergenic 25.0%
!! AGGTGATTTTGTGATAATAA+TGG + chr3_3:90501669-90501688 None:intergenic 25.0%
! ACATCATATAAGATGCAATA+CGG + chr3_3:90501794-90501813 None:intergenic 25.0%
! TATTGCATCTTATATGATGT+TGG - chr3_3:90501794-90501813 Msa0482900:three_prime_UTR 25.0%
! GTATATTTGTTTATGATCCA+TGG - chr3_3:90502025-90502044 Msa0482900:intron 25.0%
!! TACCAAATTTAAAACCTAGT+AGG - chr3_3:90502199-90502218 Msa0482900:intron 25.0%
!!! TATGATTTTTCAGTTAGGAA+TGG - chr3_3:90502384-90502403 Msa0482900:intron 25.0%
!! GCAAAACAATTTTACATGTT+AGG - chr3_3:90502445-90502464 Msa0482900:CDS 25.0%
! AATGCAAATGCAAAATGTAA+TGG + chr3_3:90502619-90502638 None:intergenic 25.0%
!! TTTGTGTTTAAGTTTCAGTT+TGG - chr3_3:90502742-90502761 Msa0482900:intron 25.0%
!!! CTTTTTTGTTACACTGTTTA+TGG - chr3_3:90502820-90502839 Msa0482900:intron 25.0%
!!! GAGTATGCTTTTTTTTTTGA+AGG - chr3_3:90503014-90503033 Msa0482900:CDS 25.0%
!!! TATTTTTTGTGTTTGCAGTT+TGG - chr3_3:90503088-90503107 Msa0482900:intron 25.0%
! AGAATTCTGATATTAATGAC+CGG - chr3_3:90503125-90503144 Msa0482900:intron 25.0%
!! CAATGATAAGTTGGAAAAAT+AGG + chr3_3:90503293-90503312 None:intergenic 25.0%
!! ACATGCTATTCTAAATTTTG+TGG - chr3_3:90503455-90503474 Msa0482900:intron 25.0%
!!! ATTATGTTTTTTCTTTGGGA+TGG + chr3_3:90503585-90503604 None:intergenic 25.0%
!!! GTCTCATTATGTTTTTTCTT+TGG + chr3_3:90503590-90503609 None:intergenic 25.0%
! TATAGACCAAGATTAAATTG+CGG - chr3_3:90503675-90503694 Msa0482900:intron 25.0%
! TGTGTCATAGAAAAAATTGT+TGG - chr3_3:90503857-90503876 Msa0482900:intron 25.0%
!!! GTCGTCTTATTTATATTATG+AGG + chr3_3:90503980-90503999 None:intergenic 25.0%
! CATGAATTTAGTGAATCATA+CGG - chr3_3:90504190-90504209 Msa0482900:intron 25.0%
! ATGAATTTAGTGAATCATAC+GGG - chr3_3:90504191-90504210 Msa0482900:intron 25.0%
! GTATAGTAAATGTAAACAAG+AGG + chr3_3:90504479-90504498 None:intergenic 25.0%
!!! GACTAATTTGTCTTTTTGTT+CGG - chr3_3:90504597-90504616 Msa0482900:intron 25.0%
! TAAATTAATAATGTCAGGAC+CGG + chr3_3:90504712-90504731 None:intergenic 25.0%
! GTAGTAGTACTACTATTTAA+TGG + chr3_3:90504836-90504855 None:intergenic 25.0%
! AGTCCATGAATTATAACTAT+TGG - chr3_3:90504936-90504955 Msa0482900:intron 25.0%
! GTCCATGAATTATAACTATT+GGG - chr3_3:90504937-90504956 Msa0482900:intron 25.0%
!!! TTAAGCAGTGTTTAGTTTTT+AGG - chr3_3:90505200-90505219 Msa0482900:intron 25.0%
!!! TAAGCAGTGTTTAGTTTTTA+GGG - chr3_3:90505201-90505220 Msa0482900:intron 25.0%
! AAAACATTGTAATTAGGTCT+AGG + chr3_3:90505371-90505390 None:intergenic 25.0%
!! GTGTTGACATCATTAATAAT+TGG - chr3_3:90505742-90505761 Msa0482900:intron 25.0%
!! TAATAATTGGACTTTTCTTC+TGG - chr3_3:90505755-90505774 Msa0482900:intron 25.0%
! TTGATTGACAATGTAAAAAC+AGG - chr3_3:90506020-90506039 Msa0482900:CDS 25.0%
! GTATTCAAATTGAACAATCA+GGG - chr3_3:90506252-90506271 Msa0482900:CDS 25.0%
!!! TGGTATATTGGTTTTGAATT+TGG - chr3_3:90506826-90506845 Msa0482900:intron 25.0%
!! CTGGTATAGAAATTTTCATA+AGG - chr3_3:90507213-90507232 Msa0482900:five_prime_UTR 25.0%
! GTTCAAAATCTACATTTGAA+AGG + chr3_3:90507329-90507348 None:intergenic 25.0%
!! TGAACTAGATTCTAAGAATA+TGG - chr3_3:90507344-90507363 Msa0482900:intron 25.0%
ATAAGATACATAAGGGTCAT+TGG + chr3_3:90501346-90501365 None:intergenic 30.0%
!! AAGTGGCTTTTAAAGGAAAT+TGG + chr3_3:90501458-90501477 None:intergenic 30.0%
! TTGTGTAAAGTGGCTTTTAA+AGG + chr3_3:90501465-90501484 None:intergenic 30.0%
GAGAAGAATGAATGATTGAA+AGG + chr3_3:90501504-90501523 None:intergenic 30.0%
GAAAATCCCAAAAAAAGTGA+AGG + chr3_3:90501540-90501559 None:intergenic 30.0%
!! CTTCTTCATTTGTTGTTGAA+AGG + chr3_3:90501689-90501708 None:intergenic 30.0%
ACAACAAGATCTTACAAGAA+AGG - chr3_3:90501716-90501735 Msa0482900:three_prime_UTR 30.0%
AAGATCTTACAAGAAAGGTT+TGG - chr3_3:90501721-90501740 Msa0482900:three_prime_UTR 30.0%
! AACAACAACATTATTGGCTA+TGG + chr3_3:90501874-90501893 None:intergenic 30.0%
ATAGCCAATAATGTTGTTGT+TGG - chr3_3:90501873-90501892 Msa0482900:intron 30.0%
AAAGCCAACAACAACATTAT+TGG + chr3_3:90501880-90501899 None:intergenic 30.0%
!!! GCTCTTTATTTTTTTGTGCT+AGG + chr3_3:90501976-90501995 None:intergenic 30.0%
!!! GACCTACTAGGTTTTAAATT+TGG + chr3_3:90502204-90502223 None:intergenic 30.0%
ATTATCATTGTGTACCGTTA+GGG + chr3_3:90502277-90502296 None:intergenic 30.0%
AATTATCATTGTGTACCGTT+AGG + chr3_3:90502278-90502297 None:intergenic 30.0%
AGTGCATTAGAAACTTTATG+TGG - chr3_3:90502409-90502428 Msa0482900:CDS 30.0%
CATTTCAATTTCCTCTCAAT+AGG - chr3_3:90502635-90502654 Msa0482900:CDS 30.0%
!! AAGTTTCAGTTTGGTGTTAT+TGG - chr3_3:90502751-90502770 Msa0482900:intron 30.0%
TACTTTGAATTTCTCTTGGT+GGG - chr3_3:90502783-90502802 Msa0482900:intron 30.0%
! TTTTGTTACACTGTTTATGG+TGG - chr3_3:90502823-90502842 Msa0482900:intron 30.0%
GAATTCTGATATTAATGACC+GGG - chr3_3:90503126-90503145 Msa0482900:intron 30.0%
!! GATCCATAGTATGTTTTGTT+TGG - chr3_3:90503344-90503363 Msa0482900:intron 30.0%
CATCATTTCCAATCCATTTA+TGG + chr3_3:90503378-90503397 None:intergenic 30.0%
ATTGGAAATGATGATTCCAT+TGG - chr3_3:90503385-90503404 Msa0482900:intron 30.0%
ACGATATATCAATACCAACA+AGG - chr3_3:90503755-90503774 Msa0482900:intron 30.0%
! CACAATATCTTTGTTTGACT+AGG + chr3_3:90503885-90503904 None:intergenic 30.0%
!! GATTTGAAGTCACTAGATTT+TGG - chr3_3:90503939-90503958 Msa0482900:intron 30.0%
TCTAGGTTTCTTTATGTGAA+CGG - chr3_3:90504090-90504109 Msa0482900:intron 30.0%
! GGAGATCCCTTTATAATTTT+CGG - chr3_3:90504378-90504397 Msa0482900:intron 30.0%
TTGGGACCGAAAATTATAAA+GGG + chr3_3:90504387-90504406 None:intergenic 30.0%
ACTACTGTGTTCATATACAT+TGG + chr3_3:90504523-90504542 None:intergenic 30.0%
! AAATAAAATTGGTGGCTGTA+TGG + chr3_3:90504781-90504800 None:intergenic 30.0%
CACCCAATAGTTATAATTCA+TGG + chr3_3:90504942-90504961 None:intergenic 30.0%
TCAATAAATTTGGTCATAGG+AGG + chr3_3:90504980-90504999 None:intergenic 30.0%
!!! AAGCAGTGTTTAGTTTTTAG+GGG - chr3_3:90505202-90505221 Msa0482900:intron 30.0%
! GTTCCTCTTGGATTTTTAAT+GGG - chr3_3:90506113-90506132 Msa0482900:CDS 30.0%
GGTATTCAAATTGAACAATC+AGG - chr3_3:90506251-90506270 Msa0482900:CDS 30.0%
AATTGAACAATCAGGGAATT+TGG - chr3_3:90506259-90506278 Msa0482900:CDS 30.0%
ATTGAACAATCAGGGAATTT+GGG - chr3_3:90506260-90506279 Msa0482900:CDS 30.0%
CAAAGTTAACATAACCCTAA+AGG - chr3_3:90506504-90506523 Msa0482900:intron 30.0%
TGCAATCTCTTTGTATTCTT+TGG - chr3_3:90506792-90506811 Msa0482900:intron 30.0%
! ATTCTTTGGTTTCTTACTTG+TGG - chr3_3:90506806-90506825 Msa0482900:intron 30.0%
GTTTCTTACTTGTGGTATAT+TGG - chr3_3:90506814-90506833 Msa0482900:intron 30.0%
GAATTGGAATATAGTTGTAC+CGG - chr3_3:90506980-90506999 Msa0482900:CDS 30.0%
AATTGGAATATAGTTGTACC+GGG - chr3_3:90506981-90507000 Msa0482900:CDS 30.0%
! ATGCTTTGTGTTTGCTAAAA+TGG - chr3_3:90507247-90507266 Msa0482900:five_prime_UTR 30.0%
TTGAAAGATAACTCCTAAAC+CGG + chr3_3:90507403-90507422 None:intergenic 30.0%
! ATACATAAGGGTCATTGGTT+GGG + chr3_3:90501341-90501360 None:intergenic 35.0%
TTCACCATTAGGAGAAACAA+AGG - chr3_3:90501641-90501660 Msa0482900:three_prime_UTR 35.0%
GGATTGAATCAAAGAAGCTA+TGG - chr3_3:90501742-90501761 Msa0482900:three_prime_UTR 35.0%
AAGAAGCTATGGCATATAGT+TGG - chr3_3:90501753-90501772 Msa0482900:three_prime_UTR 35.0%
!!! GTTGTTGTTGGCTTTGATTT+TGG - chr3_3:90501885-90501904 Msa0482900:intron 35.0%
TGTTATGTAAACGTACCAAG+AGG + chr3_3:90501911-90501930 None:intergenic 35.0%
GTCAAAGAATCTAATCACCA+TGG + chr3_3:90502045-90502064 None:intergenic 35.0%
GAATCGATATTAGACCTACT+AGG + chr3_3:90502216-90502235 None:intergenic 35.0%
GTGAATGCAAAAATCCCTAA+CGG - chr3_3:90502260-90502279 Msa0482900:intron 35.0%
ACTTTATGTGGACAAGCATT+TGG - chr3_3:90502421-90502440 Msa0482900:CDS 35.0%
CTTTATGTGGACAAGCATTT+GGG - chr3_3:90502422-90502441 Msa0482900:CDS 35.0%
TTTATGTGGACAAGCATTTG+GGG - chr3_3:90502423-90502442 Msa0482900:CDS 35.0%
!! TTAACACTGGTGTTGCAAAA+AGG + chr3_3:90502534-90502553 None:intergenic 35.0%
ACACCAGTGTTAAGACTATT+AGG - chr3_3:90502541-90502560 Msa0482900:intron 35.0%
CTTTGTAAGAACCTATTGAG+AGG + chr3_3:90502649-90502668 None:intergenic 35.0%
!! CTGCTACTTTGAATTTCTCT+TGG - chr3_3:90502779-90502798 Msa0482900:intron 35.0%
CTACTTTGAATTTCTCTTGG+TGG - chr3_3:90502782-90502801 Msa0482900:intron 35.0%
ACAAAAAAGCCCTACAGTAA+GGG + chr3_3:90502809-90502828 None:intergenic 35.0%
AACAAAAAAGCCCTACAGTA+AGG + chr3_3:90502810-90502829 None:intergenic 35.0%
!! TTTTCTATGGAGGCTTTTTC+TGG - chr3_3:90502868-90502887 Msa0482900:CDS 35.0%
!! TTTCTATGGAGGCTTTTTCT+GGG - chr3_3:90502869-90502888 Msa0482900:CDS 35.0%
! TGCTATGGTAAGTTTTTCTC+AGG - chr3_3:90502932-90502951 Msa0482900:CDS 35.0%
TAGTGAGTCGATCAAGAAAA+TGG - chr3_3:90503220-90503239 Msa0482900:intron 35.0%
AGTTGGAAAAATAGGCCATA+TGG + chr3_3:90503285-90503304 None:intergenic 35.0%
CTGCCAAACAAAACATACTA+TGG + chr3_3:90503350-90503369 None:intergenic 35.0%
CAAACTTGCACAATCTCATT+GGG - chr3_3:90503610-90503629 Msa0482900:intron 35.0%
!!! TTTTTTGGTAGTGTCCTTGT+TGG + chr3_3:90503772-90503791 None:intergenic 35.0%
CTAGGTTTCTTTATGTGAAC+GGG - chr3_3:90504091-90504110 Msa0482900:intron 35.0%
! CTAAGAACAAAGGTTTGCTT+TGG - chr3_3:90504218-90504237 Msa0482900:intron 35.0%
CTTGGGACCGAAAATTATAA+AGG + chr3_3:90504388-90504407 None:intergenic 35.0%
CTAATTTACGTTGAGTCTCA+AGG - chr3_3:90504545-90504564 Msa0482900:intron 35.0%
ATAAATTTGGTCATAGGAGG+AGG + chr3_3:90504977-90504996 None:intergenic 35.0%
CTTATTCATGTCTTGTGTTG+AGG + chr3_3:90505313-90505332 None:intergenic 35.0%
CTCAACACAAGACATGAATA+AGG - chr3_3:90505311-90505330 Msa0482900:intron 35.0%
AATGCAATATTGCAGAGTGA+GGG - chr3_3:90505660-90505679 Msa0482900:intron 35.0%
TTGCTTACTTCATCAAGAAC+AGG + chr3_3:90505835-90505854 None:intergenic 35.0%
TGACAATGTAAAAACAGGAG+TGG - chr3_3:90506025-90506044 Msa0482900:CDS 35.0%
! GGTTCCTCTTGGATTTTTAA+TGG - chr3_3:90506112-90506131 Msa0482900:CDS 35.0%
CAACCCATTAAAAATCCAAG+AGG + chr3_3:90506119-90506138 None:intergenic 35.0%
!! CTCTTGGATTTTTAATGGGT+TGG - chr3_3:90506117-90506136 Msa0482900:CDS 35.0%
! GTACTTTGATCAAGGTGTTA+TGG - chr3_3:90506139-90506158 Msa0482900:CDS 35.0%
AACATAACCCTAAAGGACAA+AGG - chr3_3:90506511-90506530 Msa0482900:intron 35.0%
ACATAACCCTAAAGGACAAA+GGG - chr3_3:90506512-90506531 Msa0482900:intron 35.0%
!! ATTGTGTTGGCTAAAATTGC+AGG - chr3_3:90506870-90506889 Msa0482900:CDS 35.0%
GTTTCTCTTCGTAACCAAAA+TGG - chr3_3:90506953-90506972 Msa0482900:CDS 35.0%
TAACCAAAATGGACAGGAAT+TGG - chr3_3:90506964-90506983 Msa0482900:CDS 35.0%
! ATTCCAATTCCTGTCCATTT+TGG + chr3_3:90506970-90506989 None:intergenic 35.0%
GTAGTGGTGAAACCTTATAT+TGG + chr3_3:90507182-90507201 None:intergenic 35.0%
GATACATAAGGGTCATTGGT+TGG + chr3_3:90501342-90501361 None:intergenic 40.0%
! GAGGGGTGGTAAATTTTGTT+TGG + chr3_3:90501568-90501587 None:intergenic 40.0%
TTTGACATAGCTAGCTAGCT+AGG + chr3_3:90501609-90501628 None:intergenic 40.0%
CTAGCTAGCTATGTCAAACA+AGG - chr3_3:90501611-90501630 Msa0482900:three_prime_UTR 40.0%
! AAGGAACTAGCTTCACCATT+AGG - chr3_3:90501630-90501649 Msa0482900:three_prime_UTR 40.0%
! GGAACCTTTGTTTCTCCTAA+TGG + chr3_3:90501648-90501667 None:intergenic 40.0%
CAATACGGCTGAAAATTGCA+GGG + chr3_3:90501779-90501798 None:intergenic 40.0%
GATTGTCAATGTCGAAACAG+GGG + chr3_3:90502078-90502097 None:intergenic 40.0%
CGATTGTCAATGTCGAAACA+GGG + chr3_3:90502079-90502098 None:intergenic 40.0%
ACGATTGTCAATGTCGAAAC+AGG + chr3_3:90502080-90502099 None:intergenic 40.0%
! TAATTCCTCTTTTATCCCCG+CGG - chr3_3:90502293-90502312 Msa0482900:intron 40.0%
GAGTATACATGCAACGATCA+TGG - chr3_3:90502467-90502486 Msa0482900:CDS 40.0%
! GGTGTTGCAAAAAGGTAGAT+TGG + chr3_3:90502526-90502545 None:intergenic 40.0%
! TGGCCTAATAGTCTTAACAC+TGG + chr3_3:90502547-90502566 None:intergenic 40.0%
ATACAGCTAAATCCTCTGGT+TGG + chr3_3:90502567-90502586 None:intergenic 40.0%
GCTAATACAGCTAAATCCTC+TGG + chr3_3:90502571-90502590 None:intergenic 40.0%
GAGGATTTAGCTGTATTAGC+AGG - chr3_3:90502571-90502590 Msa0482900:intron 40.0%
TAGCAGGACAAGTTTCAATG+TGG - chr3_3:90502587-90502606 Msa0482900:intron 40.0%
TCAAAACAGCTGCTATAGCT+TGG - chr3_3:90502674-90502693 Msa0482900:CDS 40.0%
CAAAACAGCTGCTATAGCTT+GGG - chr3_3:90502675-90502694 Msa0482900:CDS 40.0%
!! GGTGTCTTTGTTTGCACTTT+TGG - chr3_3:90502696-90502715 Msa0482900:CDS 40.0%
!! TGGTTCATGTTTTTGTGAGC+TGG - chr3_3:90502716-90502735 Msa0482900:intron 40.0%
!! GTTGTCCTTTGACTTGGAAT+GGG - chr3_3:90502845-90502864 Msa0482900:intron 40.0%
GAAAACCCATTCCAAGTCAA+AGG + chr3_3:90502853-90502872 None:intergenic 40.0%
!! GACTTGGAATGGGTTTTCTA+TGG - chr3_3:90502855-90502874 Msa0482900:CDS 40.0%
!! TTGGAATGGGTTTTCTATGG+AGG - chr3_3:90502858-90502877 Msa0482900:CDS 40.0%
TTACCATAGCATAACACCAG+AGG + chr3_3:90502923-90502942 None:intergenic 40.0%
GTGTTTGCAGTTTGGAGAAT+TGG - chr3_3:90503096-90503115 Msa0482900:intron 40.0%
TCTACTGCAATCTCTGCATT+TGG + chr3_3:90503158-90503177 None:intergenic 40.0%
CAGTAGATGCTCTATCCATA+TGG - chr3_3:90503171-90503190 Msa0482900:intron 40.0%
TTTGGCAGCATGACCATAAA+TGG - chr3_3:90503362-90503381 Msa0482900:intron 40.0%
CAGCATGACCATAAATGGAT+TGG - chr3_3:90503367-90503386 Msa0482900:intron 40.0%
TGAAGGTCTCATCAAACTCA+TGG - chr3_3:90503537-90503556 Msa0482900:intron 40.0%
CCAATGAGATTGTGCAAGTT+TGG + chr3_3:90503612-90503631 None:intergenic 40.0%
CCAAACTTGCACAATCTCAT+TGG - chr3_3:90503609-90503628 Msa0482900:intron 40.0%
AGACCAAGATTAAATTGCGG+TGG - chr3_3:90503678-90503697 Msa0482900:intron 40.0%
TCACCACCGCAATTTAATCT+TGG + chr3_3:90503684-90503703 None:intergenic 40.0%
! GTTTTGTGATGGCTCCATAT+TGG - chr3_3:90504137-90504156 Msa0482900:intron 40.0%
AAATGTGACAGCCTCCAATA+TGG + chr3_3:90504154-90504173 None:intergenic 40.0%
TACGGGAAGACTAAGAACAA+AGG - chr3_3:90504208-90504227 Msa0482900:intron 40.0%
! GAACAAAGGTTTGCTTTGGT+CGG - chr3_3:90504222-90504241 Msa0482900:intron 40.0%
!!! TTTTTTGCATTGGCCCAAGT+CGG + chr3_3:90504319-90504338 None:intergenic 40.0%
GCTGTATGGAAACATATACG+TGG + chr3_3:90504767-90504786 None:intergenic 40.0%
!!! CAGTGTTTAGTTTTTAGGGG+TGG - chr3_3:90505205-90505224 Msa0482900:intron 40.0%
! TGTTGAGGAGAGCTTTTGAT+CGG + chr3_3:90505298-90505317 None:intergenic 40.0%
CAATGCAATATTGCAGAGTG+AGG - chr3_3:90505659-90505678 Msa0482900:intron 40.0%
TGATACCTGATAGAACTGGT+TGG + chr3_3:90505900-90505919 None:intergenic 40.0%
AAGGTGATACCTGATAGAAC+TGG + chr3_3:90505904-90505923 None:intergenic 40.0%
!! ATGGGTTGGTACTTTGATCA+AGG - chr3_3:90506131-90506150 Msa0482900:CDS 40.0%
! ATTTGGGCAGGGATGATTTT+TGG - chr3_3:90506276-90506295 Msa0482900:CDS 40.0%
TGATTACACTTCGATGTGAC+TGG - chr3_3:90506331-90506350 Msa0482900:CDS 40.0%
GATTACACTTCGATGTGACT+GGG - chr3_3:90506332-90506351 Msa0482900:CDS 40.0%
AAGACTCCCTTTGTCCTTTA+GGG + chr3_3:90506521-90506540 None:intergenic 40.0%
TCTTCGTAACCAAAATGGAC+AGG - chr3_3:90506958-90506977 Msa0482900:CDS 40.0%
TAGTTTCGGTGAATAAAGCC+CGG + chr3_3:90507002-90507021 None:intergenic 40.0%
ACCACTACTCAAAACAATGC+TGG - chr3_3:90507194-90507213 Msa0482900:five_prime_UTR 40.0%
!!! ACCAGCATTGTTTTGAGTAG+TGG + chr3_3:90507198-90507217 None:intergenic 40.0%
CCTGTATCAACGTTCAAAGT+TGG + chr3_3:90507282-90507301 None:intergenic 40.0%
CCAACTTTGAACGTTGATAC+AGG - chr3_3:90507279-90507298 Msa0482900:five_prime_UTR 40.0%
! ATTTGAAAGGTGCAGTGAGA+AGG + chr3_3:90507316-90507335 None:intergenic 40.0%
GTGTTCAATTATCGCAGCAA+GGG - chr3_3:90507366-90507385 Msa0482900:intron 40.0%
GCAATACGGCTGAAAATTGC+AGG + chr3_3:90501780-90501799 None:intergenic 45.0%
TGGAGATAGCTGCAAGTTCA+AGG + chr3_3:90501854-90501873 None:intergenic 45.0%
!!! TGGCTTTGATTTTGGCCTCT+TGG - chr3_3:90501893-90501912 Msa0482900:intron 45.0%
TCACGCAATCAGTACATCAG+TGG - chr3_3:90502109-90502128 Msa0482900:intron 45.0%
TAAGCCATGAGGATACGTTG+AGG + chr3_3:90502326-90502345 None:intergenic 45.0%
GAAAAAGGTCGTAAGCCATG+AGG + chr3_3:90502337-90502356 None:intergenic 45.0%
AAGACTATTAGGCCAACCAG+AGG - chr3_3:90502552-90502571 Msa0482900:intron 45.0%
!! CTATAGCAGCTGTTTTGAGC+TGG + chr3_3:90502672-90502691 None:intergenic 45.0%
ATGGTGGTTGTCCTTTGACT+TGG - chr3_3:90502839-90502858 Msa0482900:intron 45.0%
!! GGTTGTCCTTTGACTTGGAA+TGG - chr3_3:90502844-90502863 Msa0482900:intron 45.0%
CTCTGCATTTGGAAGATTCC+CGG + chr3_3:90503147-90503166 None:intergenic 45.0%
GTTGCAGCAAAGAATGCCAA+TGG + chr3_3:90503404-90503423 None:intergenic 45.0%
TTGGCATTCTTTGCTGCAAC+AGG - chr3_3:90503404-90503423 Msa0482900:intron 45.0%
TGGCATTCTTTGCTGCAACA+GGG - chr3_3:90503405-90503424 Msa0482900:intron 45.0%
ACTTGCACAATCTCATTGGG+TGG - chr3_3:90503613-90503632 Msa0482900:intron 45.0%
TTGTGATGGCTCCATATTGG+AGG - chr3_3:90504140-90504159 Msa0482900:intron 45.0%
GGAGGCTGTCACATTTCATT+TGG - chr3_3:90504158-90504177 Msa0482900:intron 45.0%
!! TTTTTGCATTGGCCCAAGTC+GGG + chr3_3:90504318-90504337 None:intergenic 45.0%
CGCTGCAACGTAATTCTAAG+AGG - chr3_3:90504570-90504589 Msa0482900:intron 45.0%
ATAGGAGGAGGAAAACAGAG+TGG + chr3_3:90504965-90504984 None:intergenic 45.0%
AGTGTCCAACCAGTTCTATC+AGG - chr3_3:90505892-90505911 Msa0482900:CDS 45.0%
GTAAAAACAGGAGTGGCAGT+TGG - chr3_3:90506032-90506051 Msa0482900:CDS 45.0%
!! TTGGGGTGCTACTATGTGAT+TGG - chr3_3:90506089-90506108 Msa0482900:CDS 45.0%
!! TGGGGTGCTACTATGTGATT+GGG - chr3_3:90506090-90506109 Msa0482900:CDS 45.0%
TATGTGATTGGGGTTCCTCT+TGG - chr3_3:90506101-90506120 Msa0482900:CDS 45.0%
AACAATCAGGGAATTTGGGC+AGG - chr3_3:90506264-90506283 Msa0482900:CDS 45.0%
ACAATCAGGGAATTTGGGCA+GGG - chr3_3:90506265-90506284 Msa0482900:CDS 45.0%
TCGATGTGACTGGGATAAAG+AGG - chr3_3:90506341-90506360 Msa0482900:CDS 45.0%
CAAGACTCCCTTTGTCCTTT+AGG + chr3_3:90506522-90506541 None:intergenic 45.0%
GGTGTTCAATTATCGCAGCA+AGG - chr3_3:90507365-90507384 Msa0482900:intron 45.0%
TTCAATTATCGCAGCAAGGG+AGG - chr3_3:90507369-90507388 Msa0482900:intron 45.0%
TCAATTATCGCAGCAAGGGA+GGG - chr3_3:90507370-90507389 Msa0482900:intron 45.0%
!!! ATTTTTATTAGATAATTATT+AGG + chr3_3:90503656-90503675 None:intergenic 5.0%
!! TTATTATAAATAAATATTCT+AGG - chr3_3:90504073-90504092 Msa0482900:intron 5.0%
!!! ATAATAAGATAATAATTTTT+TGG - chr3_3:90504356-90504375 Msa0482900:intron 5.0%
!!! TAATAAGATAATAATTTTTT+GGG - chr3_3:90504357-90504376 Msa0482900:intron 5.0%
!! AGTTATAATAAAATATTAAA+TGG + chr3_3:90506770-90506789 None:intergenic 5.0%
GTCATCACTCAAGCCTTTGC+TGG - chr3_3:90501816-90501835 Msa0482900:CDS 50.0%
CAAGCCTTTGCTGGTCATCT+TGG - chr3_3:90501825-90501844 Msa0482900:CDS 50.0%
GTCACCAAGATGACCAGCAA+AGG + chr3_3:90501832-90501851 None:intergenic 50.0%
GTTAACCGCGGGGATAAAAG+AGG + chr3_3:90502301-90502320 None:intergenic 50.0%
!! TGGAGGCTTTTTCTGGGCTT+TGG - chr3_3:90502875-90502894 Msa0482900:CDS 50.0%
!! GGAGGCTTTTTCTGGGCTTT+GGG - chr3_3:90502876-90502895 Msa0482900:CDS 50.0%
GTTAAACTTTCCGCTGCCTC+TGG - chr3_3:90502904-90502923 Msa0482900:CDS 50.0%
TAGCATAACACCAGAGGCAG+CGG + chr3_3:90502917-90502936 None:intergenic 50.0%
!! CTGCCTCTGGTGTTATGCTA+TGG - chr3_3:90502917-90502936 Msa0482900:CDS 50.0%
AAATTTGTCCGGTCCCGACT+TGG - chr3_3:90504302-90504321 Msa0482900:intron 50.0%
AATTTGTCCGGTCCCGACTT+GGG - chr3_3:90504303-90504322 Msa0482900:intron 50.0%
AACGAGCTTGGAGCTGGAAA+TGG - chr3_3:90505688-90505707 Msa0482900:intron 50.0%
ACGAGCTTGGAGCTGGAAAT+GGG - chr3_3:90505689-90505708 Msa0482900:intron 50.0%
CTTGGAGCTGGAAATGGGAA+AGG - chr3_3:90505694-90505713 Msa0482900:intron 50.0%
!! GGGGTGCTACTATGTGATTG+GGG - chr3_3:90506091-90506110 Msa0482900:CDS 50.0%
!! TGGGCAGGGATGATTTTTGG+AGG - chr3_3:90506279-90506298 Msa0482900:CDS 50.0%
CAATTATCGCAGCAAGGGAG+GGG - chr3_3:90507371-90507390 Msa0482900:intron 50.0%
TCTTCGTGCGTGAAGCACGA+GGG + chr3_3:90501586-90501605 None:intergenic 55.0%
TACGTTGAGGCGGTTAACCG+CGG + chr3_3:90502313-90502332 None:intergenic 55.0%
ACCGCCTCAACGTATCCTCA+TGG - chr3_3:90502319-90502338 Msa0482900:intron 55.0%
GCCATGAGGATACGTTGAGG+CGG + chr3_3:90502323-90502342 None:intergenic 55.0%
! TCTTGGTGGGCCCTTACTGT+AGG - chr3_3:90502796-90502815 Msa0482900:intron 55.0%
! CTTGGTGGGCCCTTACTGTA+GGG - chr3_3:90502797-90502816 Msa0482900:intron 55.0%
ACAGGAGTGGCAGTTGGATC+AGG - chr3_3:90506038-90506057 Msa0482900:CDS 55.0%
CAGGAGTGGCAGTTGGATCA+GGG - chr3_3:90506039-90506058 Msa0482900:CDS 55.0%
CTTCGTGCGTGAAGCACGAG+GGG + chr3_3:90501585-90501604 None:intergenic 60.0%
GTCTTCGTGCGTGAAGCACG+AGG + chr3_3:90501587-90501606 None:intergenic 60.0%
ACGTTGAGGCGGTTAACCGC+GGG + chr3_3:90502312-90502331 None:intergenic 60.0%
GTGAGGGTTGCGAACGAGCT+TGG - chr3_3:90505676-90505695 Msa0482900:intron 60.0%
GTTGCGAACGAGCTTGGAGC+TGG - chr3_3:90505682-90505701 Msa0482900:intron 60.0%
GAGTGGCAGTTGGATCAGGG+TGG - chr3_3:90506042-90506061 Msa0482900:CDS 60.0%
AGCAAGGGAGGGGACTCTTC+CGG - chr3_3:90507381-90507400 Msa0482900:five_prime_UTR 60.0%
GGAGGGGACTCTTCCGGTTT+AGG - chr3_3:90507387-90507406 Msa0482900:five_prime_UTR 60.0%
CGTTGAGGCGGTTAACCGCG+GGG + chr3_3:90502311-90502330 None:intergenic 65.0%
! GCATTGGCCCAAGTCGGGAC+CGG + chr3_3:90504313-90504332 None:intergenic 65.0%
CGTGCGTGAAGCACGAGGGG+TGG + chr3_3:90501582-90501601 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 90501314 90507451 90501314 ID=Msa0482900;Name=Msa0482900
chr3_3 mRNA 90501314 90507451 90501314 ID=Msa0482900-mRNA-1;Parent=Msa0482900;Name=Msa0482900-mRNA-1;_AED=0.29;_eAED=0.29;_QI=278|1|1|1|0.77|0.6|10|418|495
chr3_3 exon 90501314 90501382 90501314 ID=Msa0482900-mRNA-1:exon:26411;Parent=Msa0482900-mRNA-1
chr3_3 exon 90501465 90501873 90501465 ID=Msa0482900-mRNA-1:exon:26410;Parent=Msa0482900-mRNA-1
chr3_3 exon 90502403 90502492 90502403 ID=Msa0482900-mRNA-1:exon:26409;Parent=Msa0482900-mRNA-1
chr3_3 exon 90502605 90502723 90502605 ID=Msa0482900-mRNA-1:exon:26408;Parent=Msa0482900-mRNA-1
chr3_3 exon 90502852 90503090 90502852 ID=Msa0482900-mRNA-1:exon:26407;Parent=Msa0482900-mRNA-1
chr3_3 exon 90505339 90505395 90505339 ID=Msa0482900-mRNA-1:exon:26406;Parent=Msa0482900-mRNA-1
chr3_3 exon 90505573 90505659 90505573 ID=Msa0482900-mRNA-1:exon:26405;Parent=Msa0482900-mRNA-1
chr3_3 exon 90505827 90506368 90505827 ID=Msa0482900-mRNA-1:exon:26404;Parent=Msa0482900-mRNA-1
chr3_3 exon 90506851 90507346 90506851 ID=Msa0482900-mRNA-1:exon:26403;Parent=Msa0482900-mRNA-1
chr3_3 exon 90507376 90507451 90507376 ID=Msa0482900-mRNA-1:exon:26402;Parent=Msa0482900-mRNA-1
chr3_3 five_prime_UTR 90507376 90507451 90507376 ID=Msa0482900-mRNA-1:five_prime_utr;Parent=Msa0482900-mRNA-1
chr3_3 five_prime_UTR 90507145 90507346 90507145 ID=Msa0482900-mRNA-1:five_prime_utr;Parent=Msa0482900-mRNA-1
chr3_3 CDS 90506851 90507144 90506851 ID=Msa0482900-mRNA-1:cds;Parent=Msa0482900-mRNA-1
chr3_3 CDS 90505827 90506368 90505827 ID=Msa0482900-mRNA-1:cds;Parent=Msa0482900-mRNA-1
chr3_3 CDS 90505573 90505659 90505573 ID=Msa0482900-mRNA-1:cds;Parent=Msa0482900-mRNA-1
chr3_3 CDS 90505339 90505395 90505339 ID=Msa0482900-mRNA-1:cds;Parent=Msa0482900-mRNA-1
chr3_3 CDS 90502852 90503090 90502852 ID=Msa0482900-mRNA-1:cds;Parent=Msa0482900-mRNA-1
chr3_3 CDS 90502605 90502723 90502605 ID=Msa0482900-mRNA-1:cds;Parent=Msa0482900-mRNA-1
chr3_3 CDS 90502403 90502492 90502403 ID=Msa0482900-mRNA-1:cds;Parent=Msa0482900-mRNA-1
chr3_3 CDS 90501814 90501873 90501814 ID=Msa0482900-mRNA-1:cds;Parent=Msa0482900-mRNA-1
chr3_3 three_prime_UTR 90501465 90501813 90501465 ID=Msa0482900-mRNA-1:three_prime_utr;Parent=Msa0482900-mRNA-1
chr3_3 three_prime_UTR 90501314 90501382 90501314 ID=Msa0482900-mRNA-1:three_prime_utr;Parent=Msa0482900-mRNA-1
Gene Sequence

>Msa0482900

ATGTCAAACAAGGAACTAGCTTCACCATTAGGAGAAACAAAGGTTCCATTATTATCACAAAATCACCTTTCAACAACAAATGAAGAAGAAGAAGAACAACAAGATCTTACAAGAAAGGTTTGGATTGAATCAAAGAAGCTATGGCATATAGTTGGCCCTGCAATTTTCAGCCGTATTGCATCTTATATGATGTTGGTCATCACTCAAGCCTTTGCTGGTCATCTTGGTGACCTTGAACTTGCAGCTATCTCCATAGCCAATAATGTTGTTGTTGGCTTTGATTTTGGCCTCTTGTTAGGAATGGCAAGTGCATTAGAAACTTTATGTGGACAAGCATTTGGGGCAAAACAATTTTACATGTTAGGAGTATACATGCAACGATCATGGATAGTATTATTCATATGTTGTATTTTTCTCTTACCAATCTACCTTTTTGCAACACCAGTGTTAAGACTATTAGGCCAACCAGAGGATTTAGCTGTATTAGCAGGACAAGTTTCAATGTGGATGATACCATTACATTTTGCATTTGCATTTCAATTTCCTCTCAATAGGTTCTTACAAAGCCAGCTCAAAACAGCTGCTATAGCTTGGGTGTCTTTGTTTGCACTTTTGGTTCATGTTTTTGTGAGCTGGTTGTTTGTGTTTAAGTTTCAGTTTGGTGTTATTGGAACTGCTGCTACTTTGAATTTCTCTTGGTGGGCCCTTACTGTAGGGCTTTTTTGTTACACTGTTTATGGTGGTTGTCCTTTGACTTGGAATGGGTTTTCTATGGAGGCTTTTTCTGGGCTTTGGGAATTTGTTAAACTTTCCGCTGCCTCTGGTGTTATGCTATGTTTGGAGAATTGGTATTATAGAATTCTGATATTAATGACCGGGAATCTTCCAAATGCAGAGATTGCAGTAGATGCTCTATCCATATGCATGACCATAAATGGATTGGAAATGATGATTCCATTGGCATTCTTTGCTGCAACAGGAGTGAGGGTTGCGAACGAGCTTGGAGCTGGAAATGGGAAAGGAGCAAAATTTGCTACTATAGTGTCTGTGTTGACATCATTAATAATTGGACTTTTCTTCTGGATGTTGATTATGATATTTCATGATAAATTTGGCTACATATTCTCTACTAGTAAACCTGTTCTTGATGAAGTAAGCAAGCTTTCACTTCTATTAGCATTCACAATTCTTCTCAATAGTGTCCAACCAGTTCTATCAGGAGTGGCAGTTGGATCAGGGTGGCAATCATATGTTGCATATATAAATTTGGGGTGCTACTATGTGATTGGGGTTCCTCTTGGATTTTTAATGGGTTGGTACTTTGATCAAGGTGTTATGGGAATTTGGGCAGGGATGATTTTTGGAGGAACAGCAACTCAAACATTAATTTTGTGTTTGATTACACTTCGATGTGACTGGGATAAAGAGGCAGAGAAAGCAAAATTACATATTACAAAGTGGTCAAATCGAAAACAACAACTAAGCTAG
Protein sequence

>Msa0482900

MSNKELASPLGETKVPLLSQNHLSTTNEEEEEQQDLTRKVWIESKKLWHIVGPAIFSRIASYMMLVITQAFAGHLGDLELAAISIANNVVVGFDFGLLLGMASALETLCGQAFGAKQFYMLGVYMQRSWIVLFICCIFLLPIYLFATPVLRLLGQPEDLAVLAGQVSMWMIPLHFAFAFQFPLNRFLQSQLKTAAIAWVSLFALLVHVFVSWLFVFKFQFGVIGTAATLNFSWWALTVGLFCYTVYGGCPLTWNGFSMEAFSGLWEFVKLSAASGVMLCLENWYYRILILMTGNLPNAEIAVDALSICMTINGLEMMIPLAFFAATGVRVANELGAGNGKGAKFATIVSVLTSLIIGLFFWMLIMIFHDKFGYIFSTSKPVLDEVSKLSLLLAFTILLNSVQPVLSGVAVGSGWQSYVAYINLGCYYVIGVPLGFLMGWYFDQGVMGIWAGMIFGGTATQTLILCLITLRCDWDKEAEKAKLHITKWSNRKQQLS*