AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0271580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0271580 MtrunA17_Chr2g0278921 97.689 476 11 0 1 476 1 476 0.0 958
Msa0271580 MtrunA17_Chr3g0115401 60.613 457 172 3 25 476 25 478 0.0 576
Msa0271580 MtrunA17_Chr8g0378511 27.917 480 250 19 10 475 39 436 7.01e-38 143
Msa0271580 MtrunA17_Chr4g0063531 27.803 446 234 16 38 475 62 427 2.94e-37 141
Msa0271580 MtrunA17_Chr2g0285851 27.635 351 173 11 43 384 52 330 1.29e-30 122
Msa0271580 MtrunA17_Chr8g0377241 25.387 323 201 7 21 331 29 323 9.64e-26 108
Msa0271580 MtrunA17_Chr7g0260051 31.004 229 122 6 41 269 2 194 2.02e-23 101
Msa0271580 MtrunA17_Chr3g0122681 25.067 371 204 13 38 407 30 327 3.96e-22 97.8
Msa0271580 MtrunA17_Chr8g0348991 29.412 238 151 6 39 265 21 252 1.99e-21 95.5
Msa0271580 MtrunA17_Chr3g0138981 25.840 387 190 16 32 410 3 300 2.23e-20 92.4
Msa0271580 MtrunA17_Chr6g0459491 24.474 380 208 13 44 414 57 366 9.01e-20 91.3
Msa0271580 MtrunA17_Chr4g0060541 24.289 387 203 15 15 387 2 312 5.72e-17 82.4
Msa0271580 MtrunA17_Chr2g0326541 25.292 257 174 7 37 284 14 261 7.53e-16 79.0
Msa0271580 MtrunA17_Chr5g0416461 23.743 358 190 13 39 387 125 408 1.39e-15 79.0
Msa0271580 MtrunA17_Chr4g0010161 27.092 251 162 8 27 269 55 292 1.42e-15 78.6
Msa0271580 MtrunA17_Chr8g0362081 24.000 350 187 11 45 387 152 429 3.52e-15 77.8
Msa0271580 MtrunA17_Chr7g0225551 25.543 368 199 14 46 410 58 353 1.44e-14 75.5
Msa0271580 MtrunA17_Chr4g0010131 24.481 241 160 9 39 269 67 295 6.99e-13 70.1
Msa0271580 MtrunA17_Chr3g0129221 24.026 308 176 13 40 332 6 270 4.23e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0271580 AT1G22040.1 58.004 481 191 5 1 476 1 475 0.0 542
Msa0271580 AT2G24540.1 24.939 409 233 9 43 448 28 365 1.98e-32 127
Msa0271580 AT1G30090.1 26.055 403 221 14 43 440 53 383 1.02e-29 120
Msa0271580 AT1G67480.3 27.676 383 196 15 33 411 30 335 1.65e-27 114
Msa0271580 AT1G67480.1 27.676 383 196 15 33 411 30 335 1.65e-27 114
Msa0271580 AT1G67480.2 27.676 383 196 15 33 411 30 335 1.65e-27 114
Msa0271580 AT1G55270.1 25.109 458 216 18 43 475 78 433 4.58e-26 110
Msa0271580 AT1G55270.2 27.387 398 182 17 93 475 2 307 1.24e-25 107
Msa0271580 AT3G27150.2 25.330 379 200 12 44 414 71 374 6.12e-23 101
Msa0271580 AT3G27150.1 25.330 379 200 12 44 414 71 374 6.12e-23 101
Msa0271580 AT3G61350.2 24.163 418 217 17 36 441 14 343 1.19e-21 96.7
Msa0271580 AT3G61350.1 24.163 418 217 17 36 441 14 343 1.19e-21 96.7
Msa0271580 AT3G63220.3 26.891 357 180 12 27 383 2 277 8.20e-21 94.0
Msa0271580 AT3G63220.2 26.891 357 180 12 27 383 2 277 8.20e-21 94.0
Msa0271580 AT3G63220.1 26.822 343 177 11 41 383 2 270 2.36e-20 92.4
Msa0271580 AT5G60570.2 25.575 348 187 9 43 390 49 324 8.35e-20 91.7
Msa0271580 AT5G60570.1 25.575 348 187 9 43 390 49 324 8.35e-20 91.7
Msa0271580 AT5G60570.3 25.575 348 187 9 43 390 49 324 8.35e-20 91.7
Msa0271580 AT1G26930.1 25.348 359 192 12 36 387 64 353 6.24e-19 89.4
Msa0271580 AT2G21950.1 24.599 374 202 12 41 410 18 315 9.96e-19 88.2
Msa0271580 AT2G44130.1 26.073 303 177 10 37 327 13 280 7.80e-16 79.7
Msa0271580 AT4G39590.1 24.938 405 242 14 7 410 3 346 7.91e-16 79.7
Msa0271580 AT2G02870.2 25.105 239 162 5 39 269 113 342 8.45e-16 80.1
Msa0271580 AT2G02870.3 25.105 239 162 5 39 269 113 342 8.45e-16 80.1
Msa0271580 AT2G02870.1 25.105 239 162 5 39 269 113 342 8.45e-16 80.1
Msa0271580 AT4G39550.1 25.676 296 173 8 45 338 25 275 1.45e-15 79.0
Msa0271580 AT5G02980.1 28.696 230 108 6 41 267 11 187 1.95e-15 77.8
Msa0271580 AT4G33900.1 28.205 234 129 8 47 274 15 215 3.47e-15 77.4
Msa0271580 AT1G14330.1 24.000 250 173 5 39 280 90 330 1.79e-14 75.9
Msa0271580 AT1G60570.1 27.177 379 179 17 43 407 21 316 3.25e-14 74.7
Msa0271580 AT1G74510.2 24.716 352 168 15 56 387 108 382 1.63e-13 72.8
Msa0271580 AT1G74510.1 24.716 352 168 15 56 387 108 382 1.63e-13 72.8
Msa0271580 AT1G74510.3 24.716 352 168 15 56 387 108 382 1.63e-13 72.8
Msa0271580 AT1G26930.2 25.292 257 151 7 36 270 64 301 2.55e-13 71.6
Msa0271580 AT5G49000.2 25.000 368 187 15 25 384 5 291 1.73e-12 69.3
Msa0271580 AT5G48980.1 26.357 258 160 6 10 267 2 229 4.23e-12 68.2
Msa0271580 AT5G03000.1 26.619 278 132 10 46 323 42 247 1.27e-11 66.6
Msa0271580 AT3G59940.1 24.762 315 179 11 36 327 8 287 7.88e-11 64.3

Find 112 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAAGGCATGTTCGGTAAT+TGG 0.136696 2_3:-3042193 None:intergenic
TTTGTTCCTGCCTGCCTTGC+AGG 0.185589 2_3:-3042416 None:intergenic
CCTCCTAGCCTTTGCATTGC+TGG 0.210667 2_3:-3041421 None:intergenic
TAGACCCTATTTCCGGAAAA+TGG 0.230042 2_3:+3041739 Msa0271580:CDS
TTATCATGAAATGGTTTATA+AGG 0.230061 2_3:+3041877 Msa0271580:CDS
TGTTGAAGATGAAGCCAAAA+AGG 0.289060 2_3:+3041791 Msa0271580:CDS
CTGAATCAGAGACAGAAATT+TGG 0.301990 2_3:+3042744 Msa0271580:CDS
ATGATCCAGATATCAATTCT+TGG 0.305121 2_3:+3042360 Msa0271580:CDS
CATTCTGTGGTTGCTCCATT+GGG 0.307220 2_3:+3041922 Msa0271580:CDS
TTCCTCAGAGTTTGTATTGT+TGG 0.309237 2_3:+3042306 Msa0271580:CDS
TATGCCTTAGACCCTATTTC+CGG 0.310619 2_3:+3041732 Msa0271580:CDS
CCATTCTGTGGTTGCTCCAT+TGG 0.318701 2_3:+3041921 Msa0271580:CDS
GATGGTTGCATCTATGCTTT+AGG 0.320547 2_3:+3041951 Msa0271580:CDS
TCTCAACTATGCAAAGATTA+AGG 0.321504 2_3:+3042490 Msa0271580:CDS
TGCTCCATTGGGGCTGTTGA+TGG 0.334044 2_3:+3041933 Msa0271580:CDS
TCAAGCCAAGAATTGATATC+TGG 0.338982 2_3:-3042365 None:intergenic
ATGTTGTTGGAGGGGTTACT+AGG 0.349572 2_3:+3042105 Msa0271580:CDS
GAAGGCGGCCCTTGCGAGTT+CGG 0.352706 2_3:+3041623 Msa0271580:CDS
CCTGGCAAAATCTCACTTGC+TGG 0.355161 2_3:-3041450 None:intergenic
TCACAACATTGCAGTGTTGC+AGG 0.361566 2_3:+3042646 Msa0271580:CDS
CTCCTAGCCTTTGCATTGCT+GGG 0.377402 2_3:-3041420 None:intergenic
TGATGGTTGGCCTGCAAGGC+AGG 0.382118 2_3:+3042406 Msa0271580:CDS
AAAAGGCATGTTCGGTAATT+GGG 0.382188 2_3:-3042192 None:intergenic
CGTCGCATGTGGAGCATGTT+GGG 0.397720 2_3:+3041831 Msa0271580:CDS
AACAATAAGCTATATGTTGT+TGG 0.406584 2_3:+3042092 Msa0271580:CDS
GAATCTGCAAAATCATGAAT+AGG 0.410195 2_3:-3042560 None:intergenic
TTGCTGATGTTATCATGAAA+TGG 0.419971 2_3:+3041868 Msa0271580:CDS
TCGGTCCAAGAGTTGGTAAC+AGG 0.425587 2_3:-3042020 None:intergenic
TGTTGTTGGAGGGGTTACTA+GGG 0.426700 2_3:+3042106 Msa0271580:CDS
CTGGCGATGACACCATTGAC+TGG 0.427412 2_3:-3042697 None:intergenic
GATTCAGCACATTCGCTCTC+TGG 0.429555 2_3:-3042716 None:intergenic
GAAGTCATTCCCGTAGCAAT+AGG 0.430690 2_3:-3042263 None:intergenic
TGGGTGATGGTTGGCCTGCA+AGG 0.435304 2_3:+3042402 Msa0271580:CDS
TCAAGTCGGTTTCTCGTGCT+TGG 0.437300 2_3:+3041601 Msa0271580:CDS
CCGTCGCATGTGGAGCATGT+TGG 0.445843 2_3:+3041830 Msa0271580:CDS
CTTCCGCTATGAAATCTGTT+TGG 0.449151 2_3:+3041988 Msa0271580:CDS
ATGATCCTGTTACCAACTCT+TGG 0.461425 2_3:+3042015 Msa0271580:CDS
ATTGTTGTCAACTTCTTATG+AGG 0.463564 2_3:+3041494 Msa0271580:CDS
CAACATGCTCCACATGCGAC+GGG 0.465081 2_3:-3041829 None:intergenic
TGCCTCTTGCAAGCTTCACC+TGG 0.466451 2_3:-3041468 None:intergenic
GCTTGAAATGCCAGGTGGCA+TGG 0.469694 2_3:+3042382 Msa0271580:CDS
GTCGGTTTCTCGTGCTTGGA+AGG 0.470952 2_3:+3041605 Msa0271580:CDS
ATCTGAGCTGATATCTCATC+AGG 0.480800 2_3:-3041543 None:intergenic
GTTTATAAGGAAAGATGCCT+TGG 0.481301 2_3:+3041890 Msa0271580:CDS
GGTTGGCCTGCAAGGCAGGC+AGG 0.485358 2_3:+3042410 Msa0271580:CDS
TTTAGCTTCGTCCCAGTCAA+TGG 0.487127 2_3:+3042685 Msa0271580:CDS
CTGCTATTCCCCGTCGCATG+TGG 0.490327 2_3:+3041820 Msa0271580:CDS
GATACTTGGAAAGTTGTTGC+TGG 0.492215 2_3:+3042530 Msa0271580:CDS
CGGTAATTGGGACCATGTAC+TGG 0.492594 2_3:-3042180 None:intergenic
CAGGTGGCATGGGTGATGGT+TGG 0.493790 2_3:+3042393 Msa0271580:CDS
CCGCTATGAAATCTGTTTGG+CGG 0.494061 2_3:+3041991 Msa0271580:CDS
GGGGTTACTAGGGGTCGTGG+TGG 0.495099 2_3:+3042116 Msa0271580:CDS
ATGATGAGGAAGGTGATACT+TGG 0.495162 2_3:+3042516 Msa0271580:CDS
GGTAGAGCTTACAGCAAGAC+AGG 0.496302 2_3:+3042062 Msa0271580:CDS
GGTTGCATCTATGCTTTAGG+AGG 0.499828 2_3:+3041954 Msa0271580:CDS
TTGCTCAAGCCTATTGCTAC+GGG 0.503972 2_3:+3042254 Msa0271580:CDS
CAACCATCACCCATGCCACC+TGG 0.507207 2_3:-3042392 None:intergenic
GGAGGGGTTACTAGGGGTCG+TGG 0.509663 2_3:+3042113 Msa0271580:CDS
AGTAAACTAGCTAAAAGATA+AGG 0.516003 2_3:-3042590 None:intergenic
CAACACTGCAATGTTGTGAT+TGG 0.517722 2_3:-3042642 None:intergenic
TATACTTCTGCAGATTGAAG+TGG 0.526694 2_3:-3042146 None:intergenic
CTACGGGAATGACTTCATAC+AGG 0.527456 2_3:+3042270 Msa0271580:CDS
CTTGAAATGCCAGGTGGCAT+GGG 0.528314 2_3:+3042383 Msa0271580:CDS
AGATTCAAATAATGAATTCG+AGG 0.534463 2_3:-3041579 None:intergenic
TTTGCTCAAGCCTATTGCTA+CGG 0.538151 2_3:+3042253 Msa0271580:CDS
AAAATAGTTCCGAACTCGCA+AGG 0.540298 2_3:-3041632 None:intergenic
AACTGACATTGGACTACCCT+CGG 0.550604 2_3:-3042039 None:intergenic
AATAAGCTATATGTTGTTGG+AGG 0.551125 2_3:+3042095 Msa0271580:CDS
ATAAGCTATATGTTGTTGGA+GGG 0.557405 2_3:+3042096 Msa0271580:CDS
GTTGCATCTATGCTTTAGGA+GGG 0.559792 2_3:+3041955 Msa0271580:CDS
AAATAGTTCCGAACTCGCAA+GGG 0.561546 2_3:-3041631 None:intergenic
GCAACCATCAACAGCCCCAA+TGG 0.562619 2_3:-3041937 None:intergenic
ATGCCAGGTGGCATGGGTGA+TGG 0.565824 2_3:+3042389 Msa0271580:CDS
TAAGCTCTACCAACTGACAT+TGG 0.565929 2_3:-3042050 None:intergenic
CCAACATGCTCCACATGCGA+CGG 0.566332 2_3:-3041830 None:intergenic
AATTCTTGGCTTGAAATGCC+AGG 0.566468 2_3:+3042374 Msa0271580:CDS
CCAATGGAGCAACCACAGAA+TGG 0.572414 2_3:-3041921 None:intergenic
TAAGCTATATGTTGTTGGAG+GGG 0.574613 2_3:+3042097 Msa0271580:CDS
ATTAAGGTATATGATGAGGA+AGG 0.578412 2_3:+3042506 Msa0271580:CDS
TCATTATTTGAATCTCAAGT+CGG 0.582208 2_3:+3041587 Msa0271580:CDS
ATTCTGTGGTTGCTCCATTG+GGG 0.584965 2_3:+3041923 Msa0271580:CDS
ATGATCCACACACCAGTACA+TGG 0.586621 2_3:+3042168 Msa0271580:CDS
GAGCTGATATCTCATCAGGA+AGG 0.586837 2_3:-3041539 None:intergenic
AAATCAGCCAGAAAAGCAGT+TGG 0.588648 2_3:-3042233 None:intergenic
ATCAGAGACAGAAATTTGGA+AGG 0.589781 2_3:+3042748 Msa0271580:CDS
GGTTTCTCGTGCTTGGAAGG+CGG 0.594864 2_3:+3041608 Msa0271580:CDS
ACAGAATGGCATCTGATCCA+AGG 0.595293 2_3:-3041907 None:intergenic
AGCTGATATCTCATCAGGAA+GGG 0.597132 2_3:-3041538 None:intergenic
GAATGACTTCATACAGGGGA+AGG 0.600155 2_3:+3042276 Msa0271580:CDS
TGTTACCAACTCTTGGACCG+AGG 0.601786 2_3:+3042022 Msa0271580:CDS
TGGCGATGACACCATTGACT+GGG 0.602621 2_3:-3042696 None:intergenic
CTATTTCCGGAAAATGGCAA+AGG 0.603833 2_3:+3041745 Msa0271580:CDS
GATATCTCATCAGGAAGGGA+AGG 0.603856 2_3:-3041534 None:intergenic
TTGGATCAGATGCCATTCTG+TGG 0.605348 2_3:+3041909 Msa0271580:CDS
TACGGGAATGACTTCATACA+GGG 0.606631 2_3:+3042271 Msa0271580:CDS
GTCCCAGCAATGCAAAGGCT+AGG 0.610222 2_3:+3041418 Msa0271580:CDS
GTTACCAACTCTTGGACCGA+GGG 0.612294 2_3:+3042023 Msa0271580:CDS
CCAGCAATGCAAAGGCTAGG+AGG 0.614924 2_3:+3041421 Msa0271580:CDS
AAAGATTAAGGTATATGATG+AGG 0.617342 2_3:+3042502 Msa0271580:CDS
AATCGGTCCCAGCAATGCAA+AGG 0.618805 2_3:+3041413 Msa0271580:CDS
TGCCAGGTGAAGCTTGCAAG+AGG 0.619847 2_3:+3041466 Msa0271580:CDS
GTTGTTGGAGGGGTTACTAG+GGG 0.624148 2_3:+3042107 Msa0271580:CDS
ACTACCCTCGGTCCAAGAGT+TGG 0.627317 2_3:-3042027 None:intergenic
GAGGGTAGTCCAATGTCAGT+TGG 0.628852 2_3:+3042041 Msa0271580:CDS
AACTTGGAACGACTGAAGAG+TGG 0.632366 2_3:+3041667 Msa0271580:CDS
TGGGACCATGTACTGGTGTG+TGG 0.637703 2_3:-3042173 None:intergenic
AACATGCTCCACATGCGACG+GGG 0.673746 2_3:-3041828 None:intergenic
GCATAGTTGAGAGAACTCGA+AGG 0.691816 2_3:-3042479 None:intergenic
GGCCAACAATACAAACTCTG+AGG 0.706380 2_3:-3042308 None:intergenic
TCTTGGCTTGAAATGCCAGG+TGG 0.728358 2_3:+3042377 Msa0271580:CDS
ACGGGAATGACTTCATACAG+GGG 0.766921 2_3:+3042272 Msa0271580:CDS
CCGCCAAACAGATTTCATAG+CGG 0.782866 2_3:-3041991 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCAATGATAATAAGCTTTTT+TGG + chr2_3:3041709-3041728 Msa0271580:CDS 20.0%
!! TTATCATGAAATGGTTTATA+AGG + chr2_3:3041877-3041896 Msa0271580:CDS 20.0%
!!! TCAATGATAATAAGCTTTTT+TGG + chr2_3:3041709-3041728 Msa0271580:CDS 20.0%
!! TTATCATGAAATGGTTTATA+AGG + chr2_3:3041877-3041896 Msa0271580:CDS 20.0%
! AGATTCAAATAATGAATTCG+AGG - chr2_3:3041582-3041601 None:intergenic 25.0%
! TCATTATTTGAATCTCAAGT+CGG + chr2_3:3041587-3041606 Msa0271580:CDS 25.0%
!!! TTTTGTTTGAGAAAAGAACT+TGG + chr2_3:3041651-3041670 Msa0271580:CDS 25.0%
! TCATCTTCAACAAAAACATT+TGG - chr2_3:3041783-3041802 None:intergenic 25.0%
! AACAATAAGCTATATGTTGT+TGG + chr2_3:3042092-3042111 Msa0271580:CDS 25.0%
! AAAGATTAAGGTATATGATG+AGG + chr2_3:3042502-3042521 Msa0271580:CDS 25.0%
! AGTAAACTAGCTAAAAGATA+AGG - chr2_3:3042593-3042612 None:intergenic 25.0%
!!! TATCTTTTAGCTAGTTTACT+TGG + chr2_3:3042593-3042612 Msa0271580:CDS 25.0%
! AGATTCAAATAATGAATTCG+AGG - chr2_3:3041582-3041601 None:intergenic 25.0%
! TCATTATTTGAATCTCAAGT+CGG + chr2_3:3041587-3041606 Msa0271580:CDS 25.0%
!!! TTTTGTTTGAGAAAAGAACT+TGG + chr2_3:3041651-3041670 Msa0271580:CDS 25.0%
! TCATCTTCAACAAAAACATT+TGG - chr2_3:3041783-3041802 None:intergenic 25.0%
! AACAATAAGCTATATGTTGT+TGG + chr2_3:3042092-3042111 Msa0271580:CDS 25.0%
! AAAGATTAAGGTATATGATG+AGG + chr2_3:3042502-3042521 Msa0271580:CDS 25.0%
! AGTAAACTAGCTAAAAGATA+AGG - chr2_3:3042593-3042612 None:intergenic 25.0%
!!! TATCTTTTAGCTAGTTTACT+TGG + chr2_3:3042593-3042612 Msa0271580:CDS 25.0%
ATTGTTGTCAACTTCTTATG+AGG + chr2_3:3041494-3041513 Msa0271580:CDS 30.0%
TCAACAAAAACATTTGGCAT+TGG - chr2_3:3041777-3041796 None:intergenic 30.0%
TTGCTGATGTTATCATGAAA+TGG + chr2_3:3041868-3041887 Msa0271580:CDS 30.0%
AATAAGCTATATGTTGTTGG+AGG + chr2_3:3042095-3042114 Msa0271580:CDS 30.0%
ATAAGCTATATGTTGTTGGA+GGG + chr2_3:3042096-3042115 Msa0271580:CDS 30.0%
ATGATCCAGATATCAATTCT+TGG + chr2_3:3042360-3042379 Msa0271580:CDS 30.0%
TCTCAACTATGCAAAGATTA+AGG + chr2_3:3042490-3042509 Msa0271580:CDS 30.0%
ATTAAGGTATATGATGAGGA+AGG + chr2_3:3042506-3042525 Msa0271580:CDS 30.0%
GAATCTGCAAAATCATGAAT+AGG - chr2_3:3042563-3042582 None:intergenic 30.0%
ATTGTTGTCAACTTCTTATG+AGG + chr2_3:3041494-3041513 Msa0271580:CDS 30.0%
TCAACAAAAACATTTGGCAT+TGG - chr2_3:3041777-3041796 None:intergenic 30.0%
TTGCTGATGTTATCATGAAA+TGG + chr2_3:3041868-3041887 Msa0271580:CDS 30.0%
AATAAGCTATATGTTGTTGG+AGG + chr2_3:3042095-3042114 Msa0271580:CDS 30.0%
ATAAGCTATATGTTGTTGGA+GGG + chr2_3:3042096-3042115 Msa0271580:CDS 30.0%
ATGATCCAGATATCAATTCT+TGG + chr2_3:3042360-3042379 Msa0271580:CDS 30.0%
TCTCAACTATGCAAAGATTA+AGG + chr2_3:3042490-3042509 Msa0271580:CDS 30.0%
ATTAAGGTATATGATGAGGA+AGG + chr2_3:3042506-3042525 Msa0271580:CDS 30.0%
GAATCTGCAAAATCATGAAT+AGG - chr2_3:3042563-3042582 None:intergenic 30.0%
!!! TTTGCCATTTTCCGGAAATA+GGG - chr2_3:3041746-3041765 None:intergenic 35.0%
! ACAAAAACATTTGGCATTGG+AGG - chr2_3:3041774-3041793 None:intergenic 35.0%
TGTTGAAGATGAAGCCAAAA+AGG + chr2_3:3041791-3041810 Msa0271580:CDS 35.0%
GTTGAAGATGAAGCCAAAAA+GGG + chr2_3:3041792-3041811 Msa0271580:CDS 35.0%
GTTTATAAGGAAAGATGCCT+TGG + chr2_3:3041890-3041909 Msa0271580:CDS 35.0%
TAAGCTATATGTTGTTGGAG+GGG + chr2_3:3042097-3042116 Msa0271580:CDS 35.0%
TATACTTCTGCAGATTGAAG+TGG - chr2_3:3042149-3042168 None:intergenic 35.0%
! AAAAGGCATGTTCGGTAATT+GGG - chr2_3:3042195-3042214 None:intergenic 35.0%
TTCCTCAGAGTTTGTATTGT+TGG + chr2_3:3042306-3042325 Msa0271580:CDS 35.0%
TCAAGCCAAGAATTGATATC+TGG - chr2_3:3042368-3042387 None:intergenic 35.0%
CTGAATCAGAGACAGAAATT+TGG + chr2_3:3042744-3042763 Msa0271580:CDS 35.0%
ATCAGAGACAGAAATTTGGA+AGG + chr2_3:3042748-3042767 Msa0271580:CDS 35.0%
!!! TTTGCCATTTTCCGGAAATA+GGG - chr2_3:3041746-3041765 None:intergenic 35.0%
! ACAAAAACATTTGGCATTGG+AGG - chr2_3:3041774-3041793 None:intergenic 35.0%
TGTTGAAGATGAAGCCAAAA+AGG + chr2_3:3041791-3041810 Msa0271580:CDS 35.0%
GTTGAAGATGAAGCCAAAAA+GGG + chr2_3:3041792-3041811 Msa0271580:CDS 35.0%
GTTTATAAGGAAAGATGCCT+TGG + chr2_3:3041890-3041909 Msa0271580:CDS 35.0%
TAAGCTATATGTTGTTGGAG+GGG + chr2_3:3042097-3042116 Msa0271580:CDS 35.0%
TATACTTCTGCAGATTGAAG+TGG - chr2_3:3042149-3042168 None:intergenic 35.0%
! AAAAGGCATGTTCGGTAATT+GGG - chr2_3:3042195-3042214 None:intergenic 35.0%
TTCCTCAGAGTTTGTATTGT+TGG + chr2_3:3042306-3042325 Msa0271580:CDS 35.0%
TCAAGCCAAGAATTGATATC+TGG - chr2_3:3042368-3042387 None:intergenic 35.0%
CTGAATCAGAGACAGAAATT+TGG + chr2_3:3042744-3042763 Msa0271580:CDS 35.0%
ATCAGAGACAGAAATTTGGA+AGG + chr2_3:3042748-3042767 Msa0271580:CDS 35.0%
AGCTGATATCTCATCAGGAA+GGG - chr2_3:3041541-3041560 None:intergenic 40.0%
ATCTGAGCTGATATCTCATC+AGG - chr2_3:3041546-3041565 None:intergenic 40.0%
AAATAGTTCCGAACTCGCAA+GGG - chr2_3:3041634-3041653 None:intergenic 40.0%
AAAATAGTTCCGAACTCGCA+AGG - chr2_3:3041635-3041654 None:intergenic 40.0%
TATGCCTTAGACCCTATTTC+CGG + chr2_3:3041732-3041751 Msa0271580:CDS 40.0%
! TTTTCCGGAAATAGGGTCTA+AGG - chr2_3:3041739-3041758 None:intergenic 40.0%
TAGACCCTATTTCCGGAAAA+TGG + chr2_3:3041739-3041758 Msa0271580:CDS 40.0%
!!! CTTTGCCATTTTCCGGAAAT+AGG - chr2_3:3041747-3041766 None:intergenic 40.0%
CTATTTCCGGAAAATGGCAA+AGG + chr2_3:3041745-3041764 Msa0271580:CDS 40.0%
!!! AGGTAACCTTTGCCATTTTC+CGG - chr2_3:3041754-3041773 None:intergenic 40.0%
AGATGAAGCCAAAAAGGGTT+TGG + chr2_3:3041797-3041816 Msa0271580:CDS 40.0%
! AATAGCAGCCAAACCCTTTT+TGG - chr2_3:3041808-3041827 None:intergenic 40.0%
GATGGTTGCATCTATGCTTT+AGG + chr2_3:3041951-3041970 Msa0271580:CDS 40.0%
!! GTTGCATCTATGCTTTAGGA+GGG + chr2_3:3041955-3041974 Msa0271580:CDS 40.0%
CTTCCGCTATGAAATCTGTT+TGG + chr2_3:3041988-3042007 Msa0271580:CDS 40.0%
ATGATCCTGTTACCAACTCT+TGG + chr2_3:3042015-3042034 Msa0271580:CDS 40.0%
TAAGCTCTACCAACTGACAT+TGG - chr2_3:3042053-3042072 None:intergenic 40.0%
! CAAAAGGCATGTTCGGTAAT+TGG - chr2_3:3042196-3042215 None:intergenic 40.0%
!! GCTTTTGCAAAAGGCATGTT+CGG - chr2_3:3042203-3042222 None:intergenic 40.0%
AAATCAGCCAGAAAAGCAGT+TGG - chr2_3:3042236-3042255 None:intergenic 40.0%
TTTGCTCAAGCCTATTGCTA+CGG + chr2_3:3042253-3042272 Msa0271580:CDS 40.0%
TACGGGAATGACTTCATACA+GGG + chr2_3:3042271-3042290 Msa0271580:CDS 40.0%
!!! TGGCCGTTTTTTGTTGATGT+TGG + chr2_3:3042326-3042345 Msa0271580:CDS 40.0%
!!! GGCCGTTTTTTGTTGATGTT+GGG + chr2_3:3042327-3042346 Msa0271580:CDS 40.0%
!!! GCCGTTTTTTGTTGATGTTG+GGG + chr2_3:3042328-3042347 Msa0271580:CDS 40.0%
CCCCCAACATCAACAAAAAA+CGG - chr2_3:3042332-3042351 None:intergenic 40.0%
!!! CCGTTTTTTGTTGATGTTGG+GGG + chr2_3:3042329-3042348 Msa0271580:CDS 40.0%
! AATTCTTGGCTTGAAATGCC+AGG + chr2_3:3042374-3042393 Msa0271580:CDS 40.0%
ATGATGAGGAAGGTGATACT+TGG + chr2_3:3042516-3042535 Msa0271580:CDS 40.0%
GATACTTGGAAAGTTGTTGC+TGG + chr2_3:3042530-3042549 Msa0271580:CDS 40.0%
CAACACTGCAATGTTGTGAT+TGG - chr2_3:3042645-3042664 None:intergenic 40.0%
! TTTGGAAGGTTTTCGCTTCT+AGG + chr2_3:3042762-3042781 Msa0271580:CDS 40.0%
AGCTGATATCTCATCAGGAA+GGG - chr2_3:3041541-3041560 None:intergenic 40.0%
ATCTGAGCTGATATCTCATC+AGG - chr2_3:3041546-3041565 None:intergenic 40.0%
AAATAGTTCCGAACTCGCAA+GGG - chr2_3:3041634-3041653 None:intergenic 40.0%
AAAATAGTTCCGAACTCGCA+AGG - chr2_3:3041635-3041654 None:intergenic 40.0%
TATGCCTTAGACCCTATTTC+CGG + chr2_3:3041732-3041751 Msa0271580:CDS 40.0%
! TTTTCCGGAAATAGGGTCTA+AGG - chr2_3:3041739-3041758 None:intergenic 40.0%
TAGACCCTATTTCCGGAAAA+TGG + chr2_3:3041739-3041758 Msa0271580:CDS 40.0%
!!! CTTTGCCATTTTCCGGAAAT+AGG - chr2_3:3041747-3041766 None:intergenic 40.0%
CTATTTCCGGAAAATGGCAA+AGG + chr2_3:3041745-3041764 Msa0271580:CDS 40.0%
!!! AGGTAACCTTTGCCATTTTC+CGG - chr2_3:3041754-3041773 None:intergenic 40.0%
AGATGAAGCCAAAAAGGGTT+TGG + chr2_3:3041797-3041816 Msa0271580:CDS 40.0%
! AATAGCAGCCAAACCCTTTT+TGG - chr2_3:3041808-3041827 None:intergenic 40.0%
GATGGTTGCATCTATGCTTT+AGG + chr2_3:3041951-3041970 Msa0271580:CDS 40.0%
!! GTTGCATCTATGCTTTAGGA+GGG + chr2_3:3041955-3041974 Msa0271580:CDS 40.0%
CTTCCGCTATGAAATCTGTT+TGG + chr2_3:3041988-3042007 Msa0271580:CDS 40.0%
ATGATCCTGTTACCAACTCT+TGG + chr2_3:3042015-3042034 Msa0271580:CDS 40.0%
TAAGCTCTACCAACTGACAT+TGG - chr2_3:3042053-3042072 None:intergenic 40.0%
! CAAAAGGCATGTTCGGTAAT+TGG - chr2_3:3042196-3042215 None:intergenic 40.0%
!! GCTTTTGCAAAAGGCATGTT+CGG - chr2_3:3042203-3042222 None:intergenic 40.0%
AAATCAGCCAGAAAAGCAGT+TGG - chr2_3:3042236-3042255 None:intergenic 40.0%
TTTGCTCAAGCCTATTGCTA+CGG + chr2_3:3042253-3042272 Msa0271580:CDS 40.0%
TACGGGAATGACTTCATACA+GGG + chr2_3:3042271-3042290 Msa0271580:CDS 40.0%
!!! TGGCCGTTTTTTGTTGATGT+TGG + chr2_3:3042326-3042345 Msa0271580:CDS 40.0%
!!! GGCCGTTTTTTGTTGATGTT+GGG + chr2_3:3042327-3042346 Msa0271580:CDS 40.0%
!!! GCCGTTTTTTGTTGATGTTG+GGG + chr2_3:3042328-3042347 Msa0271580:CDS 40.0%
CCCCCAACATCAACAAAAAA+CGG - chr2_3:3042332-3042351 None:intergenic 40.0%
!!! CCGTTTTTTGTTGATGTTGG+GGG + chr2_3:3042329-3042348 Msa0271580:CDS 40.0%
! AATTCTTGGCTTGAAATGCC+AGG + chr2_3:3042374-3042393 Msa0271580:CDS 40.0%
ATGATGAGGAAGGTGATACT+TGG + chr2_3:3042516-3042535 Msa0271580:CDS 40.0%
GATACTTGGAAAGTTGTTGC+TGG + chr2_3:3042530-3042549 Msa0271580:CDS 40.0%
CAACACTGCAATGTTGTGAT+TGG - chr2_3:3042645-3042664 None:intergenic 40.0%
! TTTGGAAGGTTTTCGCTTCT+AGG + chr2_3:3042762-3042781 Msa0271580:CDS 40.0%
GATATCTCATCAGGAAGGGA+AGG - chr2_3:3041537-3041556 None:intergenic 45.0%
GAGCTGATATCTCATCAGGA+AGG - chr2_3:3041542-3041561 None:intergenic 45.0%
AACTTGGAACGACTGAAGAG+TGG + chr2_3:3041667-3041686 Msa0271580:CDS 45.0%
ACAGAATGGCATCTGATCCA+AGG - chr2_3:3041910-3041929 None:intergenic 45.0%
TTGGATCAGATGCCATTCTG+TGG + chr2_3:3041909-3041928 Msa0271580:CDS 45.0%
CATTCTGTGGTTGCTCCATT+GGG + chr2_3:3041922-3041941 Msa0271580:CDS 45.0%
ATTCTGTGGTTGCTCCATTG+GGG + chr2_3:3041923-3041942 Msa0271580:CDS 45.0%
! GGTTGCATCTATGCTTTAGG+AGG + chr2_3:3041954-3041973 Msa0271580:CDS 45.0%
CCGCCAAACAGATTTCATAG+CGG - chr2_3:3041994-3042013 None:intergenic 45.0%
CCGCTATGAAATCTGTTTGG+CGG + chr2_3:3041991-3042010 Msa0271580:CDS 45.0%
AACTGACATTGGACTACCCT+CGG - chr2_3:3042042-3042061 None:intergenic 45.0%
ATGTTGTTGGAGGGGTTACT+AGG + chr2_3:3042105-3042124 Msa0271580:CDS 45.0%
TGTTGTTGGAGGGGTTACTA+GGG + chr2_3:3042106-3042125 Msa0271580:CDS 45.0%
ATGATCCACACACCAGTACA+TGG + chr2_3:3042168-3042187 Msa0271580:CDS 45.0%
! CATGCCTTTTGCAAAAGCTC+AGG + chr2_3:3042205-3042224 Msa0271580:CDS 45.0%
! AGCACCTGAGCTTTTGCAAA+AGG - chr2_3:3042212-3042231 None:intergenic 45.0%
TTGCTCAAGCCTATTGCTAC+GGG + chr2_3:3042254-3042273 Msa0271580:CDS 45.0%
GAAGTCATTCCCGTAGCAAT+AGG - chr2_3:3042266-3042285 None:intergenic 45.0%
CTACGGGAATGACTTCATAC+AGG + chr2_3:3042270-3042289 Msa0271580:CDS 45.0%
ACGGGAATGACTTCATACAG+GGG + chr2_3:3042272-3042291 Msa0271580:CDS 45.0%
GAATGACTTCATACAGGGGA+AGG + chr2_3:3042276-3042295 Msa0271580:CDS 45.0%
GGCCAACAATACAAACTCTG+AGG - chr2_3:3042311-3042330 None:intergenic 45.0%
GCATAGTTGAGAGAACTCGA+AGG - chr2_3:3042482-3042501 None:intergenic 45.0%
TCACAACATTGCAGTGTTGC+AGG + chr2_3:3042646-3042665 Msa0271580:CDS 45.0%
! TTTAGCTTCGTCCCAGTCAA+TGG + chr2_3:3042685-3042704 Msa0271580:CDS 45.0%
!! AAGGTTTTCGCTTCTAGGAG+TGG + chr2_3:3042767-3042786 Msa0271580:CDS 45.0%
GATATCTCATCAGGAAGGGA+AGG - chr2_3:3041537-3041556 None:intergenic 45.0%
GAGCTGATATCTCATCAGGA+AGG - chr2_3:3041542-3041561 None:intergenic 45.0%
AACTTGGAACGACTGAAGAG+TGG + chr2_3:3041667-3041686 Msa0271580:CDS 45.0%
ACAGAATGGCATCTGATCCA+AGG - chr2_3:3041910-3041929 None:intergenic 45.0%
TTGGATCAGATGCCATTCTG+TGG + chr2_3:3041909-3041928 Msa0271580:CDS 45.0%
CATTCTGTGGTTGCTCCATT+GGG + chr2_3:3041922-3041941 Msa0271580:CDS 45.0%
ATTCTGTGGTTGCTCCATTG+GGG + chr2_3:3041923-3041942 Msa0271580:CDS 45.0%
! GGTTGCATCTATGCTTTAGG+AGG + chr2_3:3041954-3041973 Msa0271580:CDS 45.0%
CCGCCAAACAGATTTCATAG+CGG - chr2_3:3041994-3042013 None:intergenic 45.0%
CCGCTATGAAATCTGTTTGG+CGG + chr2_3:3041991-3042010 Msa0271580:CDS 45.0%
AACTGACATTGGACTACCCT+CGG - chr2_3:3042042-3042061 None:intergenic 45.0%
ATGTTGTTGGAGGGGTTACT+AGG + chr2_3:3042105-3042124 Msa0271580:CDS 45.0%
TGTTGTTGGAGGGGTTACTA+GGG + chr2_3:3042106-3042125 Msa0271580:CDS 45.0%
ATGATCCACACACCAGTACA+TGG + chr2_3:3042168-3042187 Msa0271580:CDS 45.0%
! CATGCCTTTTGCAAAAGCTC+AGG + chr2_3:3042205-3042224 Msa0271580:CDS 45.0%
! AGCACCTGAGCTTTTGCAAA+AGG - chr2_3:3042212-3042231 None:intergenic 45.0%
TTGCTCAAGCCTATTGCTAC+GGG + chr2_3:3042254-3042273 Msa0271580:CDS 45.0%
GAAGTCATTCCCGTAGCAAT+AGG - chr2_3:3042266-3042285 None:intergenic 45.0%
CTACGGGAATGACTTCATAC+AGG + chr2_3:3042270-3042289 Msa0271580:CDS 45.0%
ACGGGAATGACTTCATACAG+GGG + chr2_3:3042272-3042291 Msa0271580:CDS 45.0%
GAATGACTTCATACAGGGGA+AGG + chr2_3:3042276-3042295 Msa0271580:CDS 45.0%
GGCCAACAATACAAACTCTG+AGG - chr2_3:3042311-3042330 None:intergenic 45.0%
GCATAGTTGAGAGAACTCGA+AGG - chr2_3:3042482-3042501 None:intergenic 45.0%
TCACAACATTGCAGTGTTGC+AGG + chr2_3:3042646-3042665 Msa0271580:CDS 45.0%
! TTTAGCTTCGTCCCAGTCAA+TGG + chr2_3:3042685-3042704 Msa0271580:CDS 45.0%
!! AAGGTTTTCGCTTCTAGGAG+TGG + chr2_3:3042767-3042786 Msa0271580:CDS 45.0%
AATCGGTCCCAGCAATGCAA+AGG + chr2_3:3041413-3041432 Msa0271580:CDS 50.0%
! CTCCTAGCCTTTGCATTGCT+GGG - chr2_3:3041423-3041442 None:intergenic 50.0%
CCTGGCAAAATCTCACTTGC+TGG - chr2_3:3041453-3041472 None:intergenic 50.0%
! CCAGCAAGTGAGATTTTGCC+AGG + chr2_3:3041450-3041469 Msa0271580:CDS 50.0%
! TCAAGTCGGTTTCTCGTGCT+TGG + chr2_3:3041601-3041620 Msa0271580:CDS 50.0%
CCAATGGAGCAACCACAGAA+TGG - chr2_3:3041924-3041943 None:intergenic 50.0%
CCATTCTGTGGTTGCTCCAT+TGG + chr2_3:3041921-3041940 Msa0271580:CDS 50.0%
!! TCGGTCCAAGAGTTGGTAAC+AGG - chr2_3:3042023-3042042 None:intergenic 50.0%
TGTTACCAACTCTTGGACCG+AGG + chr2_3:3042022-3042041 Msa0271580:CDS 50.0%
GTTACCAACTCTTGGACCGA+GGG + chr2_3:3042023-3042042 Msa0271580:CDS 50.0%
GAGGGTAGTCCAATGTCAGT+TGG + chr2_3:3042041-3042060 Msa0271580:CDS 50.0%
GGTAGAGCTTACAGCAAGAC+AGG + chr2_3:3042062-3042081 Msa0271580:CDS 50.0%
GTTGTTGGAGGGGTTACTAG+GGG + chr2_3:3042107-3042126 Msa0271580:CDS 50.0%
CGGTAATTGGGACCATGTAC+TGG - chr2_3:3042183-3042202 None:intergenic 50.0%
! TCTTGGCTTGAAATGCCAGG+TGG + chr2_3:3042377-3042396 Msa0271580:CDS 50.0%
CTTGAAATGCCAGGTGGCAT+GGG + chr2_3:3042383-3042402 Msa0271580:CDS 50.0%
! TGGCGATGACACCATTGACT+GGG - chr2_3:3042699-3042718 None:intergenic 50.0%
GATTCAGCACATTCGCTCTC+TGG - chr2_3:3042719-3042738 None:intergenic 50.0%
AATCGGTCCCAGCAATGCAA+AGG + chr2_3:3041413-3041432 Msa0271580:CDS 50.0%
! CTCCTAGCCTTTGCATTGCT+GGG - chr2_3:3041423-3041442 None:intergenic 50.0%
CCTGGCAAAATCTCACTTGC+TGG - chr2_3:3041453-3041472 None:intergenic 50.0%
! CCAGCAAGTGAGATTTTGCC+AGG + chr2_3:3041450-3041469 Msa0271580:CDS 50.0%
! TCAAGTCGGTTTCTCGTGCT+TGG + chr2_3:3041601-3041620 Msa0271580:CDS 50.0%
CCAATGGAGCAACCACAGAA+TGG - chr2_3:3041924-3041943 None:intergenic 50.0%
CCATTCTGTGGTTGCTCCAT+TGG + chr2_3:3041921-3041940 Msa0271580:CDS 50.0%
!! TCGGTCCAAGAGTTGGTAAC+AGG - chr2_3:3042023-3042042 None:intergenic 50.0%
TGTTACCAACTCTTGGACCG+AGG + chr2_3:3042022-3042041 Msa0271580:CDS 50.0%
GTTACCAACTCTTGGACCGA+GGG + chr2_3:3042023-3042042 Msa0271580:CDS 50.0%
GAGGGTAGTCCAATGTCAGT+TGG + chr2_3:3042041-3042060 Msa0271580:CDS 50.0%
GGTAGAGCTTACAGCAAGAC+AGG + chr2_3:3042062-3042081 Msa0271580:CDS 50.0%
GTTGTTGGAGGGGTTACTAG+GGG + chr2_3:3042107-3042126 Msa0271580:CDS 50.0%
CGGTAATTGGGACCATGTAC+TGG - chr2_3:3042183-3042202 None:intergenic 50.0%
! TCTTGGCTTGAAATGCCAGG+TGG + chr2_3:3042377-3042396 Msa0271580:CDS 50.0%
CTTGAAATGCCAGGTGGCAT+GGG + chr2_3:3042383-3042402 Msa0271580:CDS 50.0%
! TGGCGATGACACCATTGACT+GGG - chr2_3:3042699-3042718 None:intergenic 50.0%
GATTCAGCACATTCGCTCTC+TGG - chr2_3:3042719-3042738 None:intergenic 50.0%
GTCCCAGCAATGCAAAGGCT+AGG + chr2_3:3041418-3041437 Msa0271580:CDS 55.0%
! CCTCCTAGCCTTTGCATTGC+TGG - chr2_3:3041424-3041443 None:intergenic 55.0%
CCAGCAATGCAAAGGCTAGG+AGG + chr2_3:3041421-3041440 Msa0271580:CDS 55.0%
TGCCAGGTGAAGCTTGCAAG+AGG + chr2_3:3041466-3041485 Msa0271580:CDS 55.0%
TGCCTCTTGCAAGCTTCACC+TGG - chr2_3:3041471-3041490 None:intergenic 55.0%
! GTCGGTTTCTCGTGCTTGGA+AGG + chr2_3:3041605-3041624 Msa0271580:CDS 55.0%
GGTTTCTCGTGCTTGGAAGG+CGG + chr2_3:3041608-3041627 Msa0271580:CDS 55.0%
AACATGCTCCACATGCGACG+GGG - chr2_3:3041831-3041850 None:intergenic 55.0%
CAACATGCTCCACATGCGAC+GGG - chr2_3:3041832-3041851 None:intergenic 55.0%
CCAACATGCTCCACATGCGA+CGG - chr2_3:3041833-3041852 None:intergenic 55.0%
CGTCGCATGTGGAGCATGTT+GGG + chr2_3:3041831-3041850 Msa0271580:CDS 55.0%
TGCTCCATTGGGGCTGTTGA+TGG + chr2_3:3041933-3041952 Msa0271580:CDS 55.0%
GCAACCATCAACAGCCCCAA+TGG - chr2_3:3041940-3041959 None:intergenic 55.0%
ACTACCCTCGGTCCAAGAGT+TGG - chr2_3:3042030-3042049 None:intergenic 55.0%
! TGGGACCATGTACTGGTGTG+TGG - chr2_3:3042176-3042195 None:intergenic 55.0%
!! GGTGCTGCCAACTGCTTTTC+TGG + chr2_3:3042226-3042245 Msa0271580:CDS 55.0%
GCTTGAAATGCCAGGTGGCA+TGG + chr2_3:3042382-3042401 Msa0271580:CDS 55.0%
TTTGTTCCTGCCTGCCTTGC+AGG - chr2_3:3042419-3042438 None:intergenic 55.0%
CTGGCGATGACACCATTGAC+TGG - chr2_3:3042700-3042719 None:intergenic 55.0%
GTCCCAGCAATGCAAAGGCT+AGG + chr2_3:3041418-3041437 Msa0271580:CDS 55.0%
! CCTCCTAGCCTTTGCATTGC+TGG - chr2_3:3041424-3041443 None:intergenic 55.0%
CCAGCAATGCAAAGGCTAGG+AGG + chr2_3:3041421-3041440 Msa0271580:CDS 55.0%
TGCCAGGTGAAGCTTGCAAG+AGG + chr2_3:3041466-3041485 Msa0271580:CDS 55.0%
TGCCTCTTGCAAGCTTCACC+TGG - chr2_3:3041471-3041490 None:intergenic 55.0%
! GTCGGTTTCTCGTGCTTGGA+AGG + chr2_3:3041605-3041624 Msa0271580:CDS 55.0%
GGTTTCTCGTGCTTGGAAGG+CGG + chr2_3:3041608-3041627 Msa0271580:CDS 55.0%
AACATGCTCCACATGCGACG+GGG - chr2_3:3041831-3041850 None:intergenic 55.0%
CAACATGCTCCACATGCGAC+GGG - chr2_3:3041832-3041851 None:intergenic 55.0%
CCAACATGCTCCACATGCGA+CGG - chr2_3:3041833-3041852 None:intergenic 55.0%
CGTCGCATGTGGAGCATGTT+GGG + chr2_3:3041831-3041850 Msa0271580:CDS 55.0%
TGCTCCATTGGGGCTGTTGA+TGG + chr2_3:3041933-3041952 Msa0271580:CDS 55.0%
GCAACCATCAACAGCCCCAA+TGG - chr2_3:3041940-3041959 None:intergenic 55.0%
ACTACCCTCGGTCCAAGAGT+TGG - chr2_3:3042030-3042049 None:intergenic 55.0%
! TGGGACCATGTACTGGTGTG+TGG - chr2_3:3042176-3042195 None:intergenic 55.0%
!! GGTGCTGCCAACTGCTTTTC+TGG + chr2_3:3042226-3042245 Msa0271580:CDS 55.0%
GCTTGAAATGCCAGGTGGCA+TGG + chr2_3:3042382-3042401 Msa0271580:CDS 55.0%
TTTGTTCCTGCCTGCCTTGC+AGG - chr2_3:3042419-3042438 None:intergenic 55.0%
CTGGCGATGACACCATTGAC+TGG - chr2_3:3042700-3042719 None:intergenic 55.0%
CTGCTATTCCCCGTCGCATG+TGG + chr2_3:3041820-3041839 Msa0271580:CDS 60.0%
CCGTCGCATGTGGAGCATGT+TGG + chr2_3:3041830-3041849 Msa0271580:CDS 60.0%
ATGCCAGGTGGCATGGGTGA+TGG + chr2_3:3042389-3042408 Msa0271580:CDS 60.0%
CAACCATCACCCATGCCACC+TGG - chr2_3:3042395-3042414 None:intergenic 60.0%
! CAGGTGGCATGGGTGATGGT+TGG + chr2_3:3042393-3042412 Msa0271580:CDS 60.0%
!! TGGGTGATGGTTGGCCTGCA+AGG + chr2_3:3042402-3042421 Msa0271580:CDS 60.0%
!! TGATGGTTGGCCTGCAAGGC+AGG + chr2_3:3042406-3042425 Msa0271580:CDS 60.0%
CTGCTATTCCCCGTCGCATG+TGG + chr2_3:3041820-3041839 Msa0271580:CDS 60.0%
CCGTCGCATGTGGAGCATGT+TGG + chr2_3:3041830-3041849 Msa0271580:CDS 60.0%
ATGCCAGGTGGCATGGGTGA+TGG + chr2_3:3042389-3042408 Msa0271580:CDS 60.0%
CAACCATCACCCATGCCACC+TGG - chr2_3:3042395-3042414 None:intergenic 60.0%
! CAGGTGGCATGGGTGATGGT+TGG + chr2_3:3042393-3042412 Msa0271580:CDS 60.0%
!! TGGGTGATGGTTGGCCTGCA+AGG + chr2_3:3042402-3042421 Msa0271580:CDS 60.0%
!! TGATGGTTGGCCTGCAAGGC+AGG + chr2_3:3042406-3042425 Msa0271580:CDS 60.0%
GAAGGCGGCCCTTGCGAGTT+CGG + chr2_3:3041623-3041642 Msa0271580:CDS 65.0%
GGAGGGGTTACTAGGGGTCG+TGG + chr2_3:3042113-3042132 Msa0271580:CDS 65.0%
GGGGTTACTAGGGGTCGTGG+TGG + chr2_3:3042116-3042135 Msa0271580:CDS 65.0%
GAAGGCGGCCCTTGCGAGTT+CGG + chr2_3:3041623-3041642 Msa0271580:CDS 65.0%
GGAGGGGTTACTAGGGGTCG+TGG + chr2_3:3042113-3042132 Msa0271580:CDS 65.0%
GGGGTTACTAGGGGTCGTGG+TGG + chr2_3:3042116-3042135 Msa0271580:CDS 65.0%
!! GGTTGGCCTGCAAGGCAGGC+AGG + chr2_3:3042410-3042429 Msa0271580:CDS 70.0%
!! GGTTGGCCTGCAAGGCAGGC+AGG + chr2_3:3042410-3042429 Msa0271580:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 3041402 3042832 3041402 ID=Msa0271580;Name=Msa0271580
chr2_3 mRNA 3041402 3042832 3041402 ID=Msa0271580-mRNA-1;Parent=Msa0271580;Name=Msa0271580-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|-1|0|1|-1|1|1|0|476
chr2_3 exon 3041402 3042832 3041402 ID=Msa0271580-mRNA-1:exon:1498;Parent=Msa0271580-mRNA-1
chr2_3 CDS 3041402 3042832 3041402 ID=Msa0271580-mRNA-1:cds;Parent=Msa0271580-mRNA-1
Gene Sequence

>Msa0271580

ATGGGGAATATAATCGGTCCCAGCAATGCAAAGGCTAGGAGGAGTGCTCCAGCAAGTGAGATTTTGCCAGGTGAAGCTTGCAAGAGGCAGAGATTGTTGTCAACTTCTTATGAGGATAATTCAAGACTGATTCCTTCCCTTCCTGATGAGATATCAGCTCAGATTCTCGCTAGAGTACCTCGAATTCATTATTTGAATCTCAAGTCGGTTTCTCGTGCTTGGAAGGCGGCCCTTGCGAGTTCGGAACTATTTTGTTTGAGAAAAGAACTTGGAACGACTGAAGAGTGGCTATACATATTAACAAAAGTCAATGATAATAAGCTTTTTTGGTATGCCTTAGACCCTATTTCCGGAAAATGGCAAAGGTTACCTCCAATGCCAAATGTTTTTGTTGAAGATGAAGCCAAAAAGGGTTTGGCTGCTATTCCCCGTCGCATGTGGAGCATGTTGGGTTCAAGTATCAAAATTGCTGATGTTATCATGAAATGGTTTATAAGGAAAGATGCCTTGGATCAGATGCCATTCTGTGGTTGCTCCATTGGGGCTGTTGATGGTTGCATCTATGCTTTAGGAGGGTTTTCTAAAGCTTCCGCTATGAAATCTGTTTGGCGGTATGATCCTGTTACCAACTCTTGGACCGAGGGTAGTCCAATGTCAGTTGGTAGAGCTTACAGCAAGACAGGTGTATTGAACAATAAGCTATATGTTGTTGGAGGGGTTACTAGGGGTCGTGGTGGATTGAATCCACTTCAATCTGCAGAAGTATATGATCCACACACCAGTACATGGTCCCAATTACCGAACATGCCTTTTGCAAAAGCTCAGGTGCTGCCAACTGCTTTTCTGGCTGATTTGCTCAAGCCTATTGCTACGGGAATGACTTCATACAGGGGAAGGCTGTTTGTTCCTCAGAGTTTGTATTGTTGGCCGTTTTTTGTTGATGTTGGGGGAGAAGTTTATGATCCAGATATCAATTCTTGGCTTGAAATGCCAGGTGGCATGGGTGATGGTTGGCCTGCAAGGCAGGCAGGAACAAAATTGAGTGTTACTGTCAATAATGATTTGTATGCACTAGATCCTTCGAGTTCTCTCAACTATGCAAAGATTAAGGTATATGATGAGGAAGGTGATACTTGGAAAGTTGTTGCTGGAGATGTTCCTATTCATGATTTTGCAGATTCAGAATCTCCTTATCTTTTAGCTAGTTTACTTGGAAAACTTCACGTGATAACTAAAGATGCCAATCACAACATTGCAGTGTTGCAGGCTAACATGCAAAATGATTTAGCTTCGTCCCAGTCAATGGTGTCATCGCCAGAGAGCGAATGTGCTGAATCATCTGCTGAATCAGAGACAGAAATTTGGAAGGTTTTCGCTTCTAGGAGTGGTAGATCTTCTGAGCTAGTTAGCTGTCAATCTCTTAAAGTGTGA

Protein sequence

>Msa0271580

MGNIIGPSNAKARRSAPASEILPGEACKRQRLLSTSYEDNSRLIPSLPDEISAQILARVPRIHYLNLKSVSRAWKAALASSELFCLRKELGTTEEWLYILTKVNDNKLFWYALDPISGKWQRLPPMPNVFVEDEAKKGLAAIPRRMWSMLGSSIKIADVIMKWFIRKDALDQMPFCGCSIGAVDGCIYALGGFSKASAMKSVWRYDPVTNSWTEGSPMSVGRAYSKTGVLNNKLYVVGGVTRGRGGLNPLQSAEVYDPHTSTWSQLPNMPFAKAQVLPTAFLADLLKPIATGMTSYRGRLFVPQSLYCWPFFVDVGGEVYDPDINSWLEMPGGMGDGWPARQAGTKLSVTVNNDLYALDPSSSLNYAKIKVYDEEGDTWKVVAGDVPIHDFADSESPYLLASLLGKLHVITKDANHNIAVLQANMQNDLASSQSMVSSPESECAESSAESETEIWKVFASRSGRSSELVSCQSLKV*