Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143090 | XP_003624781.1 | 98.015 | 403 | 8 | 0 | 1 | 403 | 90 | 492 | 0.0 | 796 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143090 | sp|Q8W488|DTX21_ARATH | 63.613 | 393 | 143 | 0 | 1 | 393 | 94 | 486 | 0.0 | 533 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143090 | G7L2P1 | 98.015 | 403 | 8 | 0 | 1 | 403 | 90 | 492 | 0.0 | 796 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0187500 | Msa1143090 | 0.806226 | 9.114936e-50 | -8.615850e-47 |
| Msa1032440 | Msa1143090 | 0.813789 | 2.142651e-51 | -8.615850e-47 |
| Msa1118110 | Msa1143090 | 0.825475 | 4.594386e-54 | -8.615850e-47 |
| Msa0482900 | Msa1143090 | 0.819297 | 1.250736e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143090 | MtrunA17_Chr7g0254521 | 98.015 | 403 | 8 | 0 | 1 | 403 | 90 | 492 | 0.0 | 796 |
| Msa1143090 | MtrunA17_Chr7g0254531 | 80.303 | 396 | 77 | 1 | 1 | 396 | 1 | 395 | 0.0 | 639 |
| Msa1143090 | MtrunA17_Chr7g0254511 | 72.613 | 398 | 107 | 2 | 1 | 398 | 89 | 484 | 0.0 | 602 |
| Msa1143090 | MtrunA17_Chr6g0460541 | 68.905 | 402 | 123 | 2 | 1 | 401 | 5 | 405 | 0.0 | 556 |
| Msa1143090 | MtrunA17_Chr7g0254501 | 70.978 | 317 | 90 | 2 | 86 | 402 | 2 | 316 | 3.13e-162 | 458 |
| Msa1143090 | MtrunA17_Chr5g0412541 | 51.010 | 396 | 191 | 2 | 1 | 395 | 95 | 488 | 1.32e-145 | 422 |
| Msa1143090 | MtrunA17_Chr3g0132531 | 50.633 | 395 | 194 | 1 | 1 | 394 | 105 | 499 | 7.60e-135 | 395 |
| Msa1143090 | MtrunA17_Chr8g0368001 | 48.187 | 386 | 200 | 0 | 1 | 386 | 109 | 494 | 9.28e-134 | 393 |
| Msa1143090 | MtrunA17_Chr1g0154441 | 48.985 | 394 | 201 | 0 | 1 | 394 | 1 | 394 | 2.38e-133 | 388 |
| Msa1143090 | MtrunA17_Chr5g0412571 | 47.727 | 396 | 204 | 3 | 1 | 394 | 40 | 434 | 3.85e-133 | 389 |
| Msa1143090 | MtrunA17_Chr1g0202761 | 46.402 | 403 | 212 | 2 | 1 | 403 | 102 | 500 | 5.33e-130 | 383 |
| Msa1143090 | MtrunA17_Chr5g0412771 | 47.264 | 402 | 212 | 0 | 1 | 402 | 115 | 516 | 2.46e-128 | 379 |
| Msa1143090 | MtrunA17_Chr4g0024501 | 47.938 | 388 | 201 | 1 | 1 | 387 | 123 | 510 | 1.02e-125 | 373 |
| Msa1143090 | MtrunA17_Chr2g0322671 | 47.044 | 389 | 205 | 1 | 1 | 388 | 111 | 499 | 5.34e-120 | 358 |
| Msa1143090 | MtrunA17_Chr2g0288281 | 44.473 | 389 | 215 | 1 | 1 | 388 | 1 | 389 | 3.02e-119 | 352 |
| Msa1143090 | MtrunA17_Chr7g0248051 | 47.044 | 389 | 205 | 1 | 1 | 389 | 129 | 516 | 2.23e-115 | 346 |
| Msa1143090 | MtrunA17_Chr6g0468521 | 42.526 | 388 | 222 | 1 | 1 | 388 | 89 | 475 | 6.12e-112 | 336 |
| Msa1143090 | MtrunA17_Chr6g0468531 | 43.041 | 388 | 220 | 1 | 1 | 388 | 90 | 476 | 1.84e-111 | 335 |
| Msa1143090 | MtrunA17_Chr5g0442331 | 44.304 | 395 | 219 | 1 | 1 | 394 | 105 | 499 | 5.85e-101 | 309 |
| Msa1143090 | MtrunA17_Chr6g0468511 | 40.674 | 386 | 228 | 1 | 1 | 386 | 89 | 473 | 3.02e-99 | 303 |
| Msa1143090 | MtrunA17_Chr6g0460521 | 70.142 | 211 | 63 | 0 | 177 | 387 | 1 | 211 | 1.34e-87 | 265 |
| Msa1143090 | MtrunA17_Chr3g0132541 | 37.406 | 401 | 180 | 5 | 1 | 395 | 100 | 435 | 2.39e-84 | 264 |
| Msa1143090 | MtrunA17_Chr7g0251331 | 39.000 | 400 | 241 | 2 | 1 | 397 | 85 | 484 | 1.51e-81 | 258 |
| Msa1143090 | MtrunA17_Chr6g0483351 | 37.922 | 385 | 228 | 4 | 1 | 378 | 1 | 381 | 2.89e-81 | 256 |
| Msa1143090 | MtrunA17_Chr6g0483361 | 37.565 | 386 | 238 | 2 | 1 | 383 | 84 | 469 | 4.82e-81 | 256 |
| Msa1143090 | MtrunA17_Chr6g0460531 | 66.292 | 178 | 59 | 1 | 1 | 178 | 84 | 260 | 1.41e-80 | 248 |
| Msa1143090 | MtrunA17_Chr1g0208791 | 35.101 | 396 | 253 | 2 | 1 | 395 | 102 | 494 | 9.23e-79 | 251 |
| Msa1143090 | MtrunA17_Chr6g0483381 | 36.788 | 386 | 241 | 2 | 1 | 383 | 86 | 471 | 2.98e-78 | 249 |
| Msa1143090 | MtrunA17_Chr6g0477961 | 37.209 | 387 | 238 | 3 | 1 | 383 | 86 | 471 | 1.48e-77 | 248 |
| Msa1143090 | MtrunA17_Chr8g0392601 | 34.974 | 386 | 250 | 1 | 1 | 385 | 71 | 456 | 1.50e-76 | 245 |
| Msa1143090 | MtrunA17_Chr6g0449061 | 35.279 | 394 | 253 | 2 | 1 | 392 | 90 | 483 | 6.21e-75 | 241 |
| Msa1143090 | MtrunA17_Chr6g0483341 | 33.592 | 387 | 252 | 3 | 2 | 385 | 102 | 486 | 9.38e-72 | 233 |
| Msa1143090 | MtrunA17_Chr6g0483331 | 34.278 | 388 | 248 | 5 | 2 | 385 | 73 | 457 | 7.04e-71 | 230 |
| Msa1143090 | MtrunA17_Chr2g0317221 | 35.638 | 376 | 239 | 2 | 1 | 374 | 10 | 384 | 3.57e-69 | 224 |
| Msa1143090 | MtrunA17_Chr2g0317131 | 36.436 | 376 | 236 | 2 | 1 | 374 | 102 | 476 | 7.78e-69 | 225 |
| Msa1143090 | MtrunA17_Chr6g0483161 | 32.540 | 378 | 235 | 2 | 1 | 377 | 3 | 361 | 8.16e-68 | 219 |
| Msa1143090 | MtrunA17_Chr1g0208821 | 34.635 | 384 | 250 | 1 | 1 | 383 | 100 | 483 | 3.84e-67 | 221 |
| Msa1143090 | MtrunA17_Chr2g0317151 | 36.800 | 375 | 236 | 1 | 1 | 374 | 92 | 466 | 6.79e-67 | 220 |
| Msa1143090 | MtrunA17_Chr2g0317171 | 35.638 | 376 | 239 | 2 | 1 | 374 | 96 | 470 | 9.01e-64 | 212 |
| Msa1143090 | MtrunA17_Chr2g0317161 | 35.638 | 376 | 239 | 2 | 1 | 374 | 90 | 464 | 2.76e-63 | 211 |
| Msa1143090 | MtrunA17_Chr1g0208891 | 34.896 | 384 | 249 | 1 | 1 | 383 | 83 | 466 | 4.70e-63 | 209 |
| Msa1143090 | MtrunA17_Chr7g0251321 | 31.726 | 394 | 248 | 3 | 1 | 393 | 1 | 374 | 1.57e-62 | 206 |
| Msa1143090 | MtrunA17_Chr1g0208881 | 33.846 | 390 | 253 | 3 | 1 | 387 | 84 | 471 | 4.12e-62 | 207 |
| Msa1143090 | MtrunA17_Chr5g0440661 | 32.970 | 367 | 182 | 5 | 1 | 366 | 1 | 304 | 3.45e-50 | 171 |
| Msa1143090 | MtrunA17_Chr6g0473701 | 27.518 | 407 | 285 | 4 | 1 | 399 | 187 | 591 | 1.79e-47 | 171 |
| Msa1143090 | MtrunA17_Chr3g0140931 | 26.585 | 410 | 274 | 5 | 1 | 396 | 110 | 506 | 1.82e-46 | 167 |
| Msa1143090 | MtrunA17_Chr5g0397991 | 28.198 | 383 | 272 | 3 | 1 | 381 | 124 | 505 | 2.84e-46 | 166 |
| Msa1143090 | MtrunA17_Chr1g0203791 | 27.411 | 394 | 285 | 1 | 1 | 393 | 123 | 516 | 6.02e-46 | 166 |
| Msa1143090 | MtrunA17_Chr8g0364751 | 47.802 | 182 | 94 | 1 | 214 | 394 | 6 | 187 | 1.30e-44 | 153 |
| Msa1143090 | MtrunA17_Chr5g0428251 | 25.000 | 400 | 291 | 2 | 1 | 395 | 114 | 509 | 3.87e-44 | 161 |
| Msa1143090 | MtrunA17_Chr4g0013031 | 24.812 | 399 | 292 | 4 | 1 | 396 | 125 | 518 | 2.20e-38 | 145 |
| Msa1143090 | MtrunA17_Chr6g0483264 | 37.255 | 204 | 128 | 0 | 180 | 383 | 1 | 204 | 1.31e-36 | 133 |
| Msa1143090 | MtrunA17_Chr6g0467321 | 24.048 | 420 | 297 | 5 | 1 | 403 | 101 | 515 | 5.15e-35 | 135 |
| Msa1143090 | MtrunA17_Chr8g0364761 | 32.075 | 212 | 140 | 3 | 1 | 209 | 112 | 322 | 4.25e-32 | 124 |
| Msa1143090 | MtrunA17_Chr6g0483221 | 37.333 | 150 | 94 | 0 | 227 | 376 | 6 | 155 | 1.41e-30 | 115 |
| Msa1143090 | MtrunA17_Chr2g0295631 | 23.671 | 414 | 287 | 3 | 1 | 393 | 79 | 484 | 1.44e-30 | 122 |
| Msa1143090 | MtrunA17_Chr8g0389801 | 24.297 | 391 | 273 | 6 | 1 | 380 | 82 | 460 | 9.74e-28 | 114 |
| Msa1143090 | MtrunA17_Chr6g0483261 | 36.306 | 157 | 100 | 0 | 227 | 383 | 6 | 162 | 2.34e-24 | 99.0 |
| Msa1143090 | MtrunA17_Chr6g0483241 | 34.615 | 182 | 112 | 5 | 1 | 178 | 3 | 181 | 3.48e-24 | 98.6 |
| Msa1143090 | MtrunA17_Chr5g0442311 | 33.149 | 181 | 116 | 3 | 1 | 178 | 1 | 179 | 2.41e-22 | 93.6 |
| Msa1143090 | MtrunA17_Chr6g0487091 | 23.262 | 374 | 278 | 4 | 34 | 402 | 41 | 410 | 2.57e-19 | 89.4 |
| Msa1143090 | MtrunA17_Chr5g0398571 | 27.615 | 239 | 171 | 1 | 167 | 403 | 73 | 311 | 1.18e-17 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143090 | AT1G33110.1 | 63.613 | 393 | 143 | 0 | 1 | 393 | 94 | 486 | 0.0 | 533 |
| Msa1143090 | AT1G33100.1 | 62.595 | 393 | 147 | 0 | 1 | 393 | 91 | 483 | 0.0 | 521 |
| Msa1143090 | AT1G33090.1 | 62.087 | 393 | 149 | 0 | 1 | 393 | 94 | 486 | 1.14e-179 | 509 |
| Msa1143090 | AT1G33080.1 | 60.759 | 395 | 155 | 0 | 1 | 395 | 94 | 488 | 1.50e-178 | 506 |
| Msa1143090 | AT1G33080.2 | 62.234 | 376 | 142 | 0 | 1 | 376 | 94 | 469 | 1.63e-172 | 491 |
| Msa1143090 | AT1G33110.2 | 65.806 | 310 | 106 | 0 | 1 | 310 | 94 | 403 | 6.78e-146 | 420 |
| Msa1143090 | AT5G44050.1 | 48.724 | 392 | 200 | 1 | 1 | 391 | 98 | 489 | 1.86e-136 | 399 |
| Msa1143090 | AT5G65380.1 | 49.357 | 389 | 196 | 1 | 1 | 388 | 95 | 483 | 1.29e-134 | 395 |
| Msa1143090 | AT1G47530.2 | 49.620 | 395 | 196 | 1 | 1 | 395 | 1 | 392 | 1.62e-134 | 391 |
| Msa1143090 | AT1G47530.1 | 49.620 | 395 | 196 | 1 | 1 | 395 | 93 | 484 | 2.05e-133 | 391 |
| Msa1143090 | AT1G12950.1 | 47.619 | 399 | 208 | 1 | 1 | 399 | 125 | 522 | 1.01e-129 | 383 |
| Msa1143090 | AT3G26590.2 | 47.668 | 386 | 202 | 0 | 1 | 386 | 1 | 386 | 1.39e-129 | 379 |
| Msa1143090 | AT4G00350.1 | 47.150 | 386 | 203 | 1 | 1 | 386 | 146 | 530 | 3.44e-129 | 383 |
| Msa1143090 | AT3G26590.1 | 47.668 | 386 | 202 | 0 | 1 | 386 | 103 | 488 | 1.71e-128 | 379 |
| Msa1143090 | AT1G23300.1 | 47.146 | 403 | 211 | 1 | 1 | 403 | 102 | 502 | 3.05e-128 | 379 |
| Msa1143090 | AT5G38030.1 | 46.701 | 394 | 209 | 1 | 1 | 394 | 103 | 495 | 2.40e-127 | 376 |
| Msa1143090 | AT1G11670.1 | 48.586 | 389 | 199 | 1 | 1 | 388 | 108 | 496 | 4.73e-127 | 376 |
| Msa1143090 | AT1G61890.1 | 46.782 | 404 | 207 | 2 | 1 | 403 | 105 | 501 | 1.16e-125 | 372 |
| Msa1143090 | AT5G10420.1 | 48.985 | 394 | 200 | 1 | 1 | 393 | 96 | 489 | 1.82e-123 | 366 |
| Msa1143090 | AT1G61890.2 | 48.677 | 378 | 193 | 1 | 1 | 377 | 105 | 482 | 9.04e-122 | 362 |
| Msa1143090 | AT3G03620.2 | 46.212 | 396 | 213 | 0 | 1 | 396 | 95 | 490 | 4.34e-120 | 358 |
| Msa1143090 | AT3G03620.1 | 46.212 | 396 | 213 | 0 | 1 | 396 | 95 | 490 | 4.34e-120 | 358 |
| Msa1143090 | AT5G17700.2 | 45.567 | 406 | 212 | 1 | 1 | 397 | 92 | 497 | 5.42e-120 | 358 |
| Msa1143090 | AT5G17700.1 | 45.567 | 406 | 212 | 1 | 1 | 397 | 92 | 497 | 5.42e-120 | 358 |
| Msa1143090 | AT3G21690.1 | 48.072 | 389 | 201 | 1 | 1 | 388 | 110 | 498 | 1.56e-119 | 357 |
| Msa1143090 | AT4G25640.1 | 47.089 | 395 | 208 | 1 | 1 | 395 | 92 | 485 | 1.89e-118 | 353 |
| Msa1143090 | AT4G25640.2 | 47.089 | 395 | 208 | 1 | 1 | 395 | 92 | 485 | 8.80e-118 | 352 |
| Msa1143090 | AT4G21910.3 | 44.757 | 391 | 211 | 2 | 1 | 388 | 112 | 500 | 7.11e-115 | 345 |
| Msa1143090 | AT4G21910.1 | 44.757 | 391 | 211 | 2 | 1 | 388 | 112 | 500 | 7.11e-115 | 345 |
| Msa1143090 | AT4G21910.2 | 44.221 | 398 | 217 | 2 | 1 | 395 | 114 | 509 | 8.32e-115 | 345 |
| Msa1143090 | AT4G21910.4 | 44.221 | 398 | 217 | 2 | 1 | 395 | 114 | 509 | 8.32e-115 | 345 |
| Msa1143090 | AT4G21903.3 | 44.250 | 400 | 217 | 2 | 1 | 399 | 1 | 395 | 2.87e-114 | 339 |
| Msa1143090 | AT4G21903.1 | 44.250 | 400 | 217 | 2 | 1 | 399 | 110 | 504 | 6.46e-113 | 340 |
| Msa1143090 | AT4G21903.2 | 43.990 | 391 | 214 | 2 | 1 | 386 | 110 | 500 | 1.53e-108 | 329 |
| Msa1143090 | AT1G61890.3 | 48.673 | 339 | 173 | 1 | 1 | 338 | 105 | 443 | 3.47e-106 | 322 |
| Msa1143090 | AT4G25640.3 | 48.116 | 345 | 178 | 1 | 1 | 345 | 92 | 435 | 2.16e-104 | 317 |
| Msa1143090 | AT3G59030.1 | 41.895 | 401 | 226 | 3 | 1 | 399 | 109 | 504 | 1.22e-103 | 316 |
| Msa1143090 | AT5G17700.3 | 46.452 | 310 | 166 | 0 | 1 | 310 | 92 | 401 | 4.35e-90 | 278 |
| Msa1143090 | AT5G52450.1 | 37.129 | 404 | 241 | 4 | 2 | 398 | 85 | 482 | 5.33e-79 | 252 |
| Msa1143090 | AT2G34360.1 | 35.589 | 399 | 232 | 7 | 2 | 390 | 86 | 469 | 5.54e-76 | 244 |
| Msa1143090 | AT1G73700.1 | 36.409 | 401 | 243 | 3 | 2 | 397 | 83 | 476 | 1.05e-74 | 240 |
| Msa1143090 | AT1G66780.1 | 37.047 | 386 | 238 | 4 | 1 | 383 | 93 | 476 | 1.75e-73 | 238 |
| Msa1143090 | AT1G15150.1 | 36.318 | 402 | 243 | 6 | 1 | 395 | 89 | 484 | 1.71e-72 | 235 |
| Msa1143090 | AT3G59030.2 | 39.935 | 308 | 184 | 1 | 1 | 307 | 109 | 416 | 3.66e-72 | 232 |
| Msa1143090 | AT1G15160.1 | 35.821 | 402 | 245 | 6 | 1 | 395 | 89 | 484 | 5.53e-71 | 231 |
| Msa1143090 | AT1G15170.1 | 36.923 | 390 | 233 | 6 | 1 | 383 | 92 | 475 | 5.16e-70 | 228 |
| Msa1143090 | AT1G71140.1 | 34.447 | 389 | 244 | 5 | 1 | 383 | 84 | 467 | 2.29e-68 | 224 |
| Msa1143090 | AT1G64820.1 | 33.582 | 402 | 256 | 6 | 2 | 397 | 88 | 484 | 3.63e-67 | 221 |
| Msa1143090 | AT2G04080.1 | 33.766 | 385 | 246 | 3 | 4 | 383 | 88 | 468 | 6.50e-66 | 218 |
| Msa1143090 | AT2G04040.1 | 33.596 | 381 | 252 | 1 | 4 | 383 | 88 | 468 | 9.32e-66 | 217 |
| Msa1143090 | AT1G66760.2 | 34.872 | 390 | 241 | 5 | 1 | 383 | 86 | 469 | 1.61e-65 | 217 |
| Msa1143090 | AT1G15150.2 | 35.580 | 371 | 229 | 5 | 32 | 395 | 1 | 368 | 1.70e-65 | 213 |
| Msa1143090 | AT2G04070.1 | 34.817 | 382 | 246 | 3 | 4 | 383 | 88 | 468 | 7.07e-64 | 212 |
| Msa1143090 | AT1G66760.1 | 35.065 | 385 | 237 | 5 | 1 | 378 | 86 | 464 | 8.35e-64 | 212 |
| Msa1143090 | AT1G15180.1 | 36.667 | 390 | 234 | 6 | 1 | 383 | 93 | 476 | 9.03e-64 | 212 |
| Msa1143090 | AT2G34360.2 | 31.658 | 398 | 207 | 5 | 2 | 390 | 86 | 427 | 1.05e-63 | 211 |
| Msa1143090 | AT2G04080.2 | 33.684 | 380 | 243 | 3 | 4 | 378 | 88 | 463 | 1.84e-63 | 211 |
| Msa1143090 | AT1G15170.2 | 36.212 | 359 | 219 | 5 | 32 | 383 | 1 | 356 | 5.54e-63 | 206 |
| Msa1143090 | AT3G23560.1 | 35.979 | 378 | 235 | 3 | 1 | 374 | 97 | 471 | 3.84e-62 | 207 |
| Msa1143090 | AT3G23550.1 | 34.133 | 375 | 246 | 1 | 1 | 374 | 89 | 463 | 5.20e-62 | 207 |
| Msa1143090 | AT2G04100.1 | 34.021 | 388 | 247 | 4 | 1 | 383 | 88 | 471 | 3.61e-60 | 202 |
| Msa1143090 | AT2G04050.1 | 32.474 | 388 | 253 | 2 | 1 | 383 | 85 | 468 | 4.47e-59 | 199 |
| Msa1143090 | AT2G04100.2 | 33.938 | 386 | 246 | 4 | 1 | 381 | 88 | 469 | 1.26e-58 | 198 |
| Msa1143090 | AT2G04090.1 | 32.727 | 385 | 250 | 4 | 4 | 383 | 91 | 471 | 1.44e-55 | 190 |
| Msa1143090 | AT1G66760.3 | 34.795 | 342 | 210 | 5 | 44 | 378 | 1 | 336 | 5.27e-54 | 182 |
| Msa1143090 | AT3G23560.2 | 36.334 | 311 | 191 | 3 | 1 | 307 | 97 | 404 | 4.49e-44 | 158 |
| Msa1143090 | AT2G38510.1 | 24.311 | 399 | 298 | 3 | 1 | 396 | 64 | 461 | 1.53e-42 | 155 |
| Msa1143090 | AT1G66760.4 | 33.121 | 314 | 197 | 5 | 1 | 307 | 86 | 393 | 8.78e-39 | 144 |
| Msa1143090 | AT1G58340.1 | 25.131 | 382 | 285 | 1 | 1 | 381 | 116 | 497 | 2.02e-38 | 145 |
| Msa1143090 | AT1G15180.2 | 34.629 | 283 | 175 | 5 | 32 | 307 | 1 | 280 | 4.24e-36 | 137 |
| Msa1143090 | AT4G23030.1 | 27.612 | 402 | 282 | 3 | 1 | 397 | 91 | 488 | 1.24e-34 | 134 |
| Msa1143090 | AT5G52050.1 | 24.762 | 420 | 280 | 4 | 7 | 403 | 99 | 505 | 1.61e-33 | 131 |
| Msa1143090 | AT1G71870.1 | 21.564 | 422 | 312 | 4 | 1 | 403 | 82 | 503 | 2.00e-32 | 128 |
| Msa1143090 | AT4G29140.1 | 24.870 | 386 | 279 | 4 | 1 | 380 | 114 | 494 | 1.22e-31 | 126 |
| Msa1143090 | AT5G19700.1 | 25.743 | 404 | 290 | 3 | 1 | 399 | 94 | 492 | 1.97e-31 | 125 |
| Msa1143090 | AT5G49130.1 | 24.939 | 409 | 292 | 2 | 1 | 394 | 84 | 492 | 7.11e-29 | 118 |
| Msa1143090 | AT2G04066.1 | 39.844 | 128 | 77 | 0 | 256 | 383 | 36 | 163 | 3.60e-27 | 106 |
| Msa1143090 | AT4G22790.1 | 25.635 | 394 | 268 | 10 | 1 | 380 | 88 | 470 | 2.05e-19 | 90.5 |
Find 126 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATGATTTCAACTATTT+TGG | 0.128485 | 7_4:-18301977 | Msa1143090:CDS |
| TATTTCAATGATTATGATTA+TGG | 0.158671 | 7_4:-18302771 | Msa1143090:five_prime_UTR |
| GAGAAACCTTTCCAAGTTTC+AGG | 0.175008 | 7_4:+18301901 | None:intergenic |
| GATTCTAGAGATTAGTTAAA+TGG | 0.176797 | 7_4:-18302823 | Msa1143090:five_prime_UTR |
| TTGACAATGAAATACCAATT+TGG | 0.185856 | 7_4:-18302009 | Msa1143090:CDS |
| ACTTGTTAAATATTTAAAAT+TGG | 0.242143 | 7_4:-18302638 | Msa1143090:five_prime_UTR |
| ATTCCTGTTGGGGTTGTTCT+TGG | 0.263732 | 7_4:-18300663 | Msa1143090:CDS |
| GAGGAATGCATGAATGATTA+TGG | 0.272266 | 7_4:+18302041 | None:intergenic |
| ACAATAAAAGCAAACATAAT+TGG | 0.272274 | 7_4:+18302135 | None:intergenic |
| GAACACCATCATTGCATTCT+TGG | 0.275297 | 7_4:-18302073 | Msa1143090:CDS |
| GATGATATCACTTGGTTTCA+TGG | 0.286945 | 7_4:-18301298 | Msa1143090:CDS |
| GCATATGGAGCAAAAGAATA+TGG | 0.290474 | 7_4:-18302315 | Msa1143090:CDS |
| TGGCCTAAGAGTGTCAAAAT+TGG | 0.309153 | 7_4:+18302207 | None:intergenic |
| TGACAATGAAATACCAATTT+GGG | 0.314225 | 7_4:-18302008 | Msa1143090:CDS |
| AAATTGATGCATTATCTATA+TGG | 0.322864 | 7_4:-18301485 | Msa1143090:intron |
| TCTCATGTCATATGCTTTGA+TGG | 0.349119 | 7_4:-18300035 | Msa1143090:three_prime_UTR |
| TTGCAGGAAACATCTCTCTT+TGG | 0.351337 | 7_4:-18302164 | Msa1143090:CDS |
| GGCCTAAGAGTGTCAAAATT+GGG | 0.352011 | 7_4:+18302208 | None:intergenic |
| TCTTCTTGAACCTTCAACTT+AGG | 0.358020 | 7_4:+18298901 | None:intergenic |
| GAACCTTCAACTTAGGTTTA+CGG | 0.358309 | 7_4:+18298908 | None:intergenic |
| ATCTGGATGGGAATGTTGTT+TGG | 0.361940 | 7_4:-18300407 | Msa1143090:CDS |
| GCTATGGTACAACACAATAT+TGG | 0.365741 | 7_4:-18301544 | Msa1143090:CDS |
| AGGTTTGTTATAAAATGTTT+TGG | 0.369090 | 7_4:-18302858 | Msa1143090:five_prime_UTR |
| TCATTCATGCATTCCTCTCT+TGG | 0.371620 | 7_4:-18302035 | Msa1143090:CDS |
| ACATCATAGGTATTCCTGTT+GGG | 0.378560 | 7_4:-18300674 | Msa1143090:CDS |
| ATAGGTTGTTATTACATCAT+AGG | 0.385071 | 7_4:-18300687 | Msa1143090:CDS |
| ACTGCGTTGGCGACCCTTTG+TGG | 0.389048 | 7_4:-18302342 | Msa1143090:CDS |
| TTGCACCAGCAATCCCAAAT+TGG | 0.389493 | 7_4:+18301995 | None:intergenic |
| GTCAAACTTTCCCTTTCAGC+TGG | 0.392598 | 7_4:-18301847 | Msa1143090:CDS |
| TAATCACCTACAAAACCAAC+TGG | 0.393658 | 7_4:-18300355 | Msa1143090:CDS |
| TTAAAATGTTGTCACTTTGT+TGG | 0.396190 | 7_4:-18302700 | Msa1143090:five_prime_UTR |
| AAATACCAATTTGGGATTGC+TGG | 0.396715 | 7_4:-18302000 | Msa1143090:CDS |
| ATTTCAACAGGAGTGGCAAT+TGG | 0.399246 | 7_4:-18300744 | Msa1143090:intron |
| ATTCTAGAGATTAGTTAAAT+GGG | 0.401695 | 7_4:-18302822 | Msa1143090:five_prime_UTR |
| GTAAAATGAAAATTGTAGTT+GGG | 0.408227 | 7_4:-18302372 | Msa1143090:five_prime_UTR |
| ACCGGGACACATGTGATATA+AGG | 0.418299 | 7_4:-18303017 | Msa1143090:five_prime_UTR |
| TGTAAAATGAAAATTGTAGT+TGG | 0.423074 | 7_4:-18302373 | Msa1143090:five_prime_UTR |
| ACCCTTTGTGGACAAGCATA+TGG | 0.424866 | 7_4:-18302330 | Msa1143090:CDS |
| AAATATGAGTTGACCAATGT+TGG | 0.433777 | 7_4:+18301942 | None:intergenic |
| CAACATTGCGCCAGCTGAAA+GGG | 0.433868 | 7_4:+18301837 | None:intergenic |
| CTTCTGATATGCTTTCATCT+TGG | 0.434393 | 7_4:+18302187 | None:intergenic |
| TTTGTGATTGAAGGAATGTT+TGG | 0.439478 | 7_4:+18302100 | None:intergenic |
| ACAGGAGTGGCAATTGGAGC+AGG | 0.444328 | 7_4:-18300738 | Msa1143090:intron |
| TTTAATGTAATCATATATAT+CGG | 0.444406 | 7_4:-18303059 | Msa1143090:five_prime_UTR |
| GAAGAAGAACAAGTGCAGTT+AGG | 0.451597 | 7_4:+18302250 | None:intergenic |
| AGCAAAAGAATATGGAATGA+TGG | 0.454841 | 7_4:-18302307 | Msa1143090:CDS |
| CACAACGATCGAGAACTTTG+CGG | 0.457054 | 7_4:+18301132 | None:intergenic |
| TGTTCTTGCTTTGTGATTGA+AGG | 0.457141 | 7_4:+18302091 | None:intergenic |
| CACCATCATTGCATTCTTGG+CGG | 0.460308 | 7_4:-18302070 | Msa1143090:CDS |
| ACAAGATGATGAGGACCTTC+AGG | 0.463865 | 7_4:+18298857 | None:intergenic |
| TGCGGCCACCTCTTTATTCG+AGG | 0.471701 | 7_4:+18301027 | None:intergenic |
| TTACCAAGAACAACCCCAAC+AGG | 0.474968 | 7_4:+18300660 | None:intergenic |
| TAGATAACAATAGTATGTCT+AGG | 0.480534 | 7_4:-18300069 | Msa1143090:three_prime_UTR |
| ATGAAAATTGTAGTTGGGAA+TGG | 0.482830 | 7_4:-18302367 | Msa1143090:exon |
| TAGCTCGCAAGCGTGTAAAC+AGG | 0.483098 | 7_4:-18300210 | Msa1143090:CDS |
| CTATATATGTATCAACCTCT+TGG | 0.485650 | 7_4:+18300089 | None:intergenic |
| AAACCGTAAACCTAAGTTGA+AGG | 0.490801 | 7_4:-18298911 | Msa1143090:three_prime_UTR |
| TCTGTATTCAACACATTGAA+AGG | 0.492746 | 7_4:+18302603 | None:intergenic |
| GAGTATATCTTCAAAGATCA+TGG | 0.493939 | 7_4:-18302284 | Msa1143090:CDS |
| GAAAGGGAAAGTTTGACAAC+AGG | 0.496284 | 7_4:+18301853 | None:intergenic |
| AGATAACAATAGTATGTCTA+GGG | 0.497129 | 7_4:-18300068 | Msa1143090:three_prime_UTR |
| GTGGTTGGTGTCCTGAAACT+TGG | 0.497721 | 7_4:-18301912 | Msa1143090:CDS |
| TTCTTGGTAATGTTATCCAT+TGG | 0.504552 | 7_4:-18300647 | Msa1143090:CDS |
| TATTATGCAGTCTTGAGCTA+TGG | 0.507079 | 7_4:-18301560 | Msa1143090:intron |
| AATATGAGTTGACCAATGTT+GGG | 0.515656 | 7_4:+18301943 | None:intergenic |
| ATTAACAGTCTCAACATCAA+TGG | 0.515679 | 7_4:-18301330 | Msa1143090:intron |
| GCAAAAGAATATGGAATGAT+GGG | 0.516122 | 7_4:-18302306 | Msa1143090:CDS |
| TGTGACAGTGCTTACGTCGT+TGG | 0.516527 | 7_4:-18301113 | Msa1143090:CDS |
| CATCATAGGTATTCCTGTTG+GGG | 0.518377 | 7_4:-18300673 | Msa1143090:CDS |
| TCCATATGCTTGTCCACAAA+GGG | 0.519319 | 7_4:+18302329 | None:intergenic |
| TACATCATAGGTATTCCTGT+TGG | 0.519474 | 7_4:-18300675 | Msa1143090:CDS |
| GTATCAAATGAGCTTGGTAA+AGG | 0.521672 | 7_4:-18301166 | Msa1143090:CDS |
| CTCCATATGCTTGTCCACAA+AGG | 0.522306 | 7_4:+18302328 | None:intergenic |
| CAAAACCAACTGGGATGAGC+AGG | 0.522487 | 7_4:-18300345 | Msa1143090:intron |
| ATTATGGTGTATCTTAGTAA+AGG | 0.523701 | 7_4:-18302755 | Msa1143090:five_prime_UTR |
| TACTTTGTACCTGAGAGTAC+TGG | 0.525061 | 7_4:+18300947 | None:intergenic |
| TTAGTGCTGCATAGAGTATG+AGG | 0.525901 | 7_4:+18302501 | None:intergenic |
| TTTCGATAGGGTATCTGGAT+GGG | 0.528960 | 7_4:-18300419 | Msa1143090:intron |
| CTCATGTCATATGCTTTGAT+GGG | 0.531927 | 7_4:-18300034 | Msa1143090:three_prime_UTR |
| ATTCGTAGCAATGTTGTGTC+TGG | 0.532870 | 7_4:-18302437 | Msa1143090:five_prime_UTR |
| ACAGTCTCAACATCAATGGA+TGG | 0.534228 | 7_4:-18301326 | Msa1143090:intron |
| AGCCGCCAAGAATGCAATGA+TGG | 0.538646 | 7_4:+18302068 | None:intergenic |
| TTGATCAGTACTGTCCACCT+TGG | 0.543507 | 7_4:+18300183 | None:intergenic |
| GAAAGCATATCAGAAGTTGC+AGG | 0.546308 | 7_4:-18302180 | Msa1143090:CDS |
| TCATATTTGTTACATGTGGT+TGG | 0.546428 | 7_4:-18301927 | Msa1143090:CDS |
| TCCTTATATCACATGTGTCC+CGG | 0.551162 | 7_4:+18303016 | None:intergenic |
| ACAACATTGCGCCAGCTGAA+AGG | 0.552257 | 7_4:+18301836 | None:intergenic |
| CAAGTTTCAACATAAGTGCA+CGG | 0.552485 | 7_4:+18298770 | None:intergenic |
| TTTCAGCTGGCGCAATGTTG+TGG | 0.564543 | 7_4:-18301834 | Msa1143090:intron |
| TCATACCTGCTCATCCCAGT+TGG | 0.566874 | 7_4:+18300340 | None:intergenic |
| GTTGGGAATGGCGACTGCGT+TGG | 0.570219 | 7_4:-18302355 | Msa1143090:exon |
| CAGTCTCAACATCAATGGAT+GGG | 0.575086 | 7_4:-18301325 | Msa1143090:CDS |
| AGCCTACCTTGACTTGCCAA+TGG | 0.579025 | 7_4:+18300631 | None:intergenic |
| AGTGTTCAACCAGTACTCTC+AGG | 0.579086 | 7_4:-18300956 | Msa1143090:intron |
| GCATATTGGATTCCCAACAT+TGG | 0.580747 | 7_4:-18301955 | Msa1143090:CDS |
| AAAGAGGTGGCCGCAGCTGT+CGG | 0.584660 | 7_4:-18301019 | Msa1143090:CDS |
| GTGCTTACGTCGTTGGCCAT+CGG | 0.585684 | 7_4:-18301106 | Msa1143090:CDS |
| CCTAGGTTCACATCACAAGA+TGG | 0.588127 | 7_4:+18300010 | None:intergenic |
| CAACTCATATTTGTTACATG+TGG | 0.589602 | 7_4:-18301931 | Msa1143090:CDS |
| GTTCGAGTATCAAATGAGCT+TGG | 0.593317 | 7_4:-18301172 | Msa1143090:CDS |
| GCCTAAGAGTGTCAAAATTG+GGG | 0.593717 | 7_4:+18302209 | None:intergenic |
| GCGTGTAAACAGGTGGTCCA+AGG | 0.594189 | 7_4:-18300200 | Msa1143090:CDS |
| ACAGTAGCATATGTGAACAT+AGG | 0.603815 | 7_4:-18300705 | Msa1143090:CDS |
| ATTCTTAGCACAAGATGATG+AGG | 0.604847 | 7_4:+18298848 | None:intergenic |
| TGTTATCCATTGGCAAGTCA+AGG | 0.605886 | 7_4:-18300637 | Msa1143090:intron |
| TGGTGTCCTGAAACTTGGAA+AGG | 0.619812 | 7_4:-18301907 | Msa1143090:CDS |
| CAGGAGTGGCAATTGGAGCA+GGG | 0.627575 | 7_4:-18300737 | Msa1143090:CDS |
| AAAGTTTGACAACAGGCCAA+AGG | 0.628805 | 7_4:+18301860 | None:intergenic |
| CGATAATTCTCCGACAGCTG+CGG | 0.636484 | 7_4:+18301009 | None:intergenic |
| AGATGATGCGTATCTGACAC+CGG | 0.637524 | 7_4:-18303035 | Msa1143090:five_prime_UTR |
| TTGGTTTCATGGCTGCAGCA+AGG | 0.642144 | 7_4:-18301287 | Msa1143090:intron |
| TAGTGCTGCATAGAGTATGA+GGG | 0.648568 | 7_4:+18302502 | None:intergenic |
| TCATTGTCAAAAGCCAAGAG+AGG | 0.649754 | 7_4:+18302022 | None:intergenic |
| CTCGCAAGCGTGTAAACAGG+TGG | 0.656106 | 7_4:-18300207 | Msa1143090:CDS |
| GATGATGCGTATCTGACACC+GGG | 0.657114 | 7_4:-18303034 | Msa1143090:five_prime_UTR |
| ACACATATTGAAGACGTGTG+TGG | 0.660742 | 7_4:-18302479 | Msa1143090:five_prime_UTR |
| AGTATAGAGATCGATAACAA+AGG | 0.663232 | 7_4:+18300986 | None:intergenic |
| TTTCACCTCGAATAAAGAGG+TGG | 0.663498 | 7_4:-18301032 | Msa1143090:CDS |
| GGGGTTGTGAAGACAAACAC+AGG | 0.666387 | 7_4:+18302228 | None:intergenic |
| TGGGAAATGATGATATCACT+TGG | 0.667441 | 7_4:-18301306 | Msa1143090:CDS |
| AGTGCTGCATAGAGTATGAG+GGG | 0.670938 | 7_4:+18302503 | None:intergenic |
| TGCTGAGTTATGCAGCCAAG+AGG | 0.673575 | 7_4:-18300104 | Msa1143090:three_prime_UTR |
| AATCACCTACAAAACCAACT+GGG | 0.676987 | 7_4:-18300354 | Msa1143090:CDS |
| TGTAAACAGGTGGTCCAAGG+TGG | 0.678230 | 7_4:-18300197 | Msa1143090:CDS |
| GATAACAATAGTATGTCTAG+GGG | 0.690541 | 7_4:-18300067 | Msa1143090:three_prime_UTR |
| GAGTGGCAATTGGAGCAGGG+TGG | 0.718007 | 7_4:-18300734 | Msa1143090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATGTAATCATATATAT+CGG | - | chr7_4:18298880-18298899 | Msa1143090:three_prime_UTR | 10.0% |
| !!! | TTTAAATGTTTTAATAGAAA+AGG | + | chr7_4:18299224-18299243 | None:intergenic | 10.0% |
| !!! | ACTTGTTAAATATTTAAAAT+TGG | - | chr7_4:18299301-18299320 | Msa1143090:intron | 10.0% |
| !! | AAATGTTTGTTTAATTAATA+AGG | + | chr7_4:18301502-18301521 | None:intergenic | 10.0% |
| !! | CAAAATTAACAAAAAAAAAA+TGG | + | chr7_4:18302390-18302409 | None:intergenic | 10.0% |
| !! | TATTTCAATGATTATGATTA+TGG | - | chr7_4:18299168-18299187 | Msa1143090:intron | 15.0% |
| !!! | CTTTGTATATTTTTGTTTAA+GGG | - | chr7_4:18299277-18299296 | Msa1143090:intron | 15.0% |
| !! | AAAAAATATGTTATCCATAA+AGG | + | chr7_4:18300313-18300332 | None:intergenic | 15.0% |
| !!! | AAGTAAATGTAAATTTTCAA+TGG | + | chr7_4:18300737-18300756 | None:intergenic | 15.0% |
| !! | ATTTAATTACTATACATTGT+CGG | + | chr7_4:18301659-18301678 | None:intergenic | 15.0% |
| !! | AATAACTTTGTACATTATTT+GGG | + | chr7_4:18302087-18302106 | None:intergenic | 15.0% |
| !! | TAATAACTTTGTACATTATT+TGG | + | chr7_4:18302088-18302107 | None:intergenic | 15.0% |
| !! | AAAATCAAAATAATAAGATC+TGG | - | chr7_4:18302733-18302752 | Msa1143090:five_prime_UTR | 15.0% |
| !!! | GATAAAATTGTATTTTCTAA+TGG | - | chr7_4:18302823-18302842 | Msa1143090:five_prime_UTR | 15.0% |
| !!! | GAATTTGTTTTTGATAGATT+TGG | + | chr7_4:18298812-18298831 | None:intergenic | 20.0% |
| !! | AACAAACCTAAAGTAAAAAA+GGG | + | chr7_4:18299070-18299089 | None:intergenic | 20.0% |
| !! | TAACAAACCTAAAGTAAAAA+AGG | + | chr7_4:18299071-18299090 | None:intergenic | 20.0% |
| !!! | AGGTTTGTTATAAAATGTTT+TGG | - | chr7_4:18299081-18299100 | Msa1143090:intron | 20.0% |
| !!! | ATTCTAGAGATTAGTTAAAT+GGG | - | chr7_4:18299117-18299136 | Msa1143090:intron | 20.0% |
| !! | CCTTAAACAAAAATATACAA+AGG | + | chr7_4:18299279-18299298 | None:intergenic | 20.0% |
| !!! | CCTTTGTATATTTTTGTTTA+AGG | - | chr7_4:18299276-18299295 | Msa1143090:intron | 20.0% |
| !! | TGTAAAATGAAAATTGTAGT+TGG | - | chr7_4:18299566-18299585 | Msa1143090:intron | 20.0% |
| !! | GTAAAATGAAAATTGTAGTT+GGG | - | chr7_4:18299567-18299586 | Msa1143090:intron | 20.0% |
| !! | ACAATAAAAGCAAACATAAT+TGG | + | chr7_4:18299807-18299826 | None:intergenic | 20.0% |
| !! | AAATTGATGCATTATCTATA+TGG | - | chr7_4:18300454-18300473 | Msa1143090:intron | 20.0% |
| !! | TAATTTCATTTCATTTCAAC+AGG | - | chr7_4:18301183-18301202 | Msa1143090:intron | 20.0% |
| !! | CATATATATAACTTATGCAA+AGG | + | chr7_4:18301472-18301491 | None:intergenic | 20.0% |
| !!! | ATTAAACAAACATTTTCGAT+AGG | - | chr7_4:18301507-18301526 | Msa1143090:CDS | 20.0% |
| !!! | TTAAACAAACATTTTCGATA+GGG | - | chr7_4:18301508-18301527 | Msa1143090:CDS | 20.0% |
| !! | TTATTAAGATATTGTTAACG+AGG | + | chr7_4:18301636-18301655 | None:intergenic | 20.0% |
| !! | ATAACTTTGTACATTATTTG+GGG | + | chr7_4:18302086-18302105 | None:intergenic | 20.0% |
| !! | AAAATCTACAAAATCAAGAT+TGG | + | chr7_4:18302444-18302463 | None:intergenic | 20.0% |
| !!! | GTTAATATAAAAGAGTGTTT+TGG | - | chr7_4:18302505-18302524 | Msa1143090:five_prime_UTR | 20.0% |
| !! | ATTTAAAAGAGAAGAGTAAA+AGG | - | chr7_4:18302540-18302559 | Msa1143090:five_prime_UTR | 20.0% |
| !! | TTTAAAAGAGAAGAGTAAAA+GGG | - | chr7_4:18302541-18302560 | Msa1143090:five_prime_UTR | 20.0% |
| !! | TATAAACAGTGATTGAATAT+TGG | - | chr7_4:18302651-18302670 | Msa1143090:five_prime_UTR | 20.0% |
| !!! | TAGTATTTAACTTATACATC+AGG | - | chr7_4:18302899-18302918 | Msa1143090:five_prime_UTR | 20.0% |
| !! | TCATTTTCTCAAATTAGTGT+CGG | + | chr7_4:18298857-18298876 | None:intergenic | 25.0% |
| !!! | CTCAAAACTTGTTAGTTTTA+AGG | - | chr7_4:18298963-18298982 | Msa1143090:intron | 25.0% |
| !!! | AAACTTGTTAGTTTTAAGGA+AGG | - | chr7_4:18298967-18298986 | Msa1143090:intron | 25.0% |
| !! | GATTCTAGAGATTAGTTAAA+TGG | - | chr7_4:18299116-18299135 | Msa1143090:intron | 25.0% |
| ! | ATTATGGTGTATCTTAGTAA+AGG | - | chr7_4:18299184-18299203 | Msa1143090:intron | 25.0% |
| !!! | TTAAAATGTTGTCACTTTGT+TGG | - | chr7_4:18299239-18299258 | Msa1143090:intron | 25.0% |
| !!! | ATCTGTCATTTAACAGTTTT+TGG | - | chr7_4:18299395-18299414 | Msa1143090:intron | 25.0% |
| !!! | TCTGTCATTTAACAGTTTTT+GGG | - | chr7_4:18299396-18299415 | Msa1143090:intron | 25.0% |
| ! | TTGACAATGAAATACCAATT+TGG | - | chr7_4:18299930-18299949 | Msa1143090:intron | 25.0% |
| ! | TGACAATGAAATACCAATTT+GGG | - | chr7_4:18299931-18299950 | Msa1143090:intron | 25.0% |
| !! | TGCAATGATTTCAACTATTT+TGG | - | chr7_4:18299962-18299981 | Msa1143090:intron | 25.0% |
| !!! | TTTCAACTATTTTGGCATAT+TGG | - | chr7_4:18299970-18299989 | Msa1143090:intron | 25.0% |
| ! | TTTGATGCATGTTTGAATTA+AGG | - | chr7_4:18300174-18300193 | Msa1143090:CDS | 25.0% |
| !! | TGTAGATTTTGTCAAAATCA+CGG | - | chr7_4:18300235-18300254 | Msa1143090:intron | 25.0% |
| ! | TGATTCTATTATGTCCTTTA+TGG | - | chr7_4:18300296-18300315 | Msa1143090:intron | 25.0% |
| ! | GTAAGCATATAAGATGAAAA+AGG | + | chr7_4:18300711-18300730 | None:intergenic | 25.0% |
| ! | TAAGAAGAACAAAAACAGAA+AGG | + | chr7_4:18300861-18300880 | None:intergenic | 25.0% |
| !! | TGTGAATTAGTTTGATGAAT+TGG | - | chr7_4:18301036-18301055 | Msa1143090:CDS | 25.0% |
| !! | ATAGGTTGTTATTACATCAT+AGG | - | chr7_4:18301252-18301271 | Msa1143090:intron | 25.0% |
| !! | ATAGTTTTCAGTGTTAACAT+TGG | - | chr7_4:18301805-18301824 | Msa1143090:intron | 25.0% |
| ! | TAGATAACAATAGTATGTCT+AGG | - | chr7_4:18301870-18301889 | Msa1143090:CDS | 25.0% |
| ! | AGATAACAATAGTATGTCTA+GGG | - | chr7_4:18301871-18301890 | Msa1143090:CDS | 25.0% |
| ! | TACTGTGTATTCCTATAATA+GGG | + | chr7_4:18302052-18302071 | None:intergenic | 25.0% |
| ! | TGAATCCATTCTGAATTATA+AGG | + | chr7_4:18302222-18302241 | None:intergenic | 25.0% |
| ! | AAAAAATGATCTTGAAGTAG+AGG | + | chr7_4:18302345-18302364 | None:intergenic | 25.0% |
| ! | TGTTATTCATGTTCAATGTT+TGG | - | chr7_4:18302584-18302603 | Msa1143090:five_prime_UTR | 25.0% |
| !! | ATTGAATATTGGTTGCATTT+GGG | - | chr7_4:18302662-18302681 | Msa1143090:five_prime_UTR | 25.0% |
| !! | AAAATTGTTGTTGTTGTTGT+AGG | - | chr7_4:18302688-18302707 | Msa1143090:five_prime_UTR | 25.0% |
| !!! | CACTACTAAATATTTTTAGG+AGG | + | chr7_4:18302784-18302803 | None:intergenic | 25.0% |
| ! | CTCCTAAAAATATTTAGTAG+TGG | - | chr7_4:18302782-18302801 | Msa1143090:five_prime_UTR | 25.0% |
| !! | CACCACTACTAAATATTTTT+AGG | + | chr7_4:18302787-18302806 | None:intergenic | 25.0% |
| !! | GTATTTTCTAATGGTTTACA+CGG | - | chr7_4:18302832-18302851 | Msa1143090:five_prime_UTR | 25.0% |
| !!! | GTTTACGGTTTCTTTTAATT+TGG | + | chr7_4:18303019-18303038 | None:intergenic | 25.0% |
| !!! | AAGTTTTGAGCAATGAATCA+CGG | + | chr7_4:18298953-18298972 | None:intergenic | 30.0% |
| !!! | GTGTTACCCTTTTTTACTTT+AGG | - | chr7_4:18299061-18299080 | Msa1143090:intron | 30.0% |
| TCTGTATTCAACACATTGAA+AGG | + | chr7_4:18299339-18299358 | None:intergenic | 30.0% | |
| ATGAAAATTGTAGTTGGGAA+TGG | - | chr7_4:18299572-18299591 | Msa1143090:intron | 30.0% | |
| AGCAAAAGAATATGGAATGA+TGG | - | chr7_4:18299632-18299651 | Msa1143090:intron | 30.0% | |
| GCAAAAGAATATGGAATGAT+GGG | - | chr7_4:18299633-18299652 | Msa1143090:intron | 30.0% | |
| GAGTATATCTTCAAAGATCA+TGG | - | chr7_4:18299655-18299674 | Msa1143090:intron | 30.0% | |
| TTTGTGATTGAAGGAATGTT+TGG | + | chr7_4:18299842-18299861 | None:intergenic | 30.0% | |
| ! | AATATGAGTTGACCAATGTT+GGG | + | chr7_4:18299999-18300018 | None:intergenic | 30.0% |
| ! | AAATATGAGTTGACCAATGT+TGG | + | chr7_4:18300000-18300019 | None:intergenic | 30.0% |
| ! | CAACTCATATTTGTTACATG+TGG | - | chr7_4:18300008-18300027 | Msa1143090:intron | 30.0% |
| ! | TCATATTTGTTACATGTGGT+TGG | - | chr7_4:18300012-18300031 | Msa1143090:intron | 30.0% |
| ! | TTTTAGCATTCAAAGACCTT+TGG | - | chr7_4:18300063-18300082 | Msa1143090:three_prime_UTR | 30.0% |
| TTTGAATTAAGGATTCACAG+TGG | - | chr7_4:18300185-18300204 | Msa1143090:CDS | 30.0% | |
| !!! | ACAATATTGGTTCTTTTGAC+AGG | - | chr7_4:18300408-18300427 | Msa1143090:CDS | 30.0% |
| !!! | CAATATTGGTTCTTTTGACA+GGG | - | chr7_4:18300409-18300428 | Msa1143090:CDS | 30.0% |
| TATAAAAGGCTTCTTTCACT+TGG | - | chr7_4:18300563-18300582 | Msa1143090:intron | 30.0% | |
| ATTAACAGTCTCAACATCAA+TGG | - | chr7_4:18300609-18300628 | Msa1143090:intron | 30.0% | |
| ATAAGATGAAAAAGGATGGA+TGG | + | chr7_4:18300703-18300722 | None:intergenic | 30.0% | |
| GCATATAAGATGAAAAAGGA+TGG | + | chr7_4:18300707-18300726 | None:intergenic | 30.0% | |
| ! | TATTTTCACCTCGAATAAAG+AGG | - | chr7_4:18300904-18300923 | Msa1143090:intron | 30.0% |
| AGTATAGAGATCGATAACAA+AGG | + | chr7_4:18300956-18300975 | None:intergenic | 30.0% | |
| CATCAAACTAATTCACATAG+TGG | + | chr7_4:18301033-18301052 | None:intergenic | 30.0% | |
| !! | TTCTTGGTAATGTTATCCAT+TGG | - | chr7_4:18301292-18301311 | Msa1143090:CDS | 30.0% |
| ! | GCAATTTGAAATCAAGAAGA+GGG | + | chr7_4:18301342-18301361 | None:intergenic | 30.0% |
| ! | TGCAATTTGAAATCAAGAAG+AGG | + | chr7_4:18301343-18301362 | None:intergenic | 30.0% |
| CTATATATGTATCAACCTCT+TGG | + | chr7_4:18301853-18301872 | None:intergenic | 30.0% | |
| GATAACAATAGTATGTCTAG+GGG | - | chr7_4:18301872-18301891 | Msa1143090:CDS | 30.0% | |
| TATACCATACACCCTATTAT+AGG | - | chr7_4:18302038-18302057 | Msa1143090:CDS | 30.0% | |
| TATTCCTATAATAGGGTGTA+TGG | + | chr7_4:18302045-18302064 | None:intergenic | 30.0% | |
| CTACTGTGTATTCCTATAAT+AGG | + | chr7_4:18302053-18302072 | None:intergenic | 30.0% | |
| ATGGTAAAATTTCCTACAGT+TGG | + | chr7_4:18302144-18302163 | None:intergenic | 30.0% | |
| ! | GGGTAGAATTGGAATTTTTA+TGG | + | chr7_4:18302163-18302182 | None:intergenic | 30.0% |
| AAAAACACTATTACTCTGTG+GGG | + | chr7_4:18302195-18302214 | None:intergenic | 30.0% | |
| CAAAAACACTATTACTCTGT+GGG | + | chr7_4:18302196-18302215 | None:intergenic | 30.0% | |
| TGGAACCTTATAATTCAGAA+TGG | - | chr7_4:18302214-18302233 | Msa1143090:CDS | 30.0% | |
| ! | TTGTTTTCGTGCTTAATTTC+TGG | - | chr7_4:18302462-18302481 | Msa1143090:five_prime_UTR | 30.0% |
| !! | TTCTGGAAATCTTTTCTGTT+AGG | - | chr7_4:18302479-18302498 | Msa1143090:five_prime_UTR | 30.0% |
| ! | TGTTCAATGTTTGGAATTTG+AGG | - | chr7_4:18302593-18302612 | Msa1143090:five_prime_UTR | 30.0% |
| ! | GATTGAATATTGGTTGCATT+TGG | - | chr7_4:18302661-18302680 | Msa1143090:five_prime_UTR | 30.0% |
| AATTTGGACCAGTTAAAGTT+GGG | + | chr7_4:18303003-18303022 | None:intergenic | 30.0% | |
| TAATTTGGACCAGTTAAAGT+TGG | + | chr7_4:18303004-18303023 | None:intergenic | 30.0% | |
| ! | GTGAATTCAATTTTTCCTGA+AGG | - | chr7_4:18303067-18303086 | Msa1143090:five_prime_UTR | 30.0% |
| GCATATGGAGCAAAAGAATA+TGG | - | chr7_4:18299624-18299643 | Msa1143090:intron | 35.0% | |
| CTTCTGATATGCTTTCATCT+TGG | + | chr7_4:18299755-18299774 | None:intergenic | 35.0% | |
| TGTTCTTGCTTTGTGATTGA+AGG | + | chr7_4:18299851-18299870 | None:intergenic | 35.0% | |
| GAGGAATGCATGAATGATTA+TGG | + | chr7_4:18299901-18299920 | None:intergenic | 35.0% | |
| ! | AAATACCAATTTGGGATTGC+TGG | - | chr7_4:18299939-18299958 | Msa1143090:intron | 35.0% |
| ! | CAGATTCATTCAAGTTAGCA+AGG | + | chr7_4:18300355-18300374 | None:intergenic | 35.0% |
| TATTATGCAGTCTTGAGCTA+TGG | - | chr7_4:18300379-18300398 | Msa1143090:CDS | 35.0% | |
| GCTATGGTACAACACAATAT+TGG | - | chr7_4:18300395-18300414 | Msa1143090:CDS | 35.0% | |
| CTTGCCTTGTGATGTATAAA+AGG | - | chr7_4:18300549-18300568 | Msa1143090:intron | 35.0% | |
| ! | GAAGCCTTTTATACATCACA+AGG | + | chr7_4:18300556-18300575 | None:intergenic | 35.0% |
| TGGGAAATGATGATATCACT+TGG | - | chr7_4:18300633-18300652 | Msa1143090:intron | 35.0% | |
| GATGATATCACTTGGTTTCA+TGG | - | chr7_4:18300641-18300660 | Msa1143090:CDS | 35.0% | |
| TGAAAAAGGATGGATGGAAA+GGG | + | chr7_4:18300697-18300716 | None:intergenic | 35.0% | |
| ATGAAAAAGGATGGATGGAA+AGG | + | chr7_4:18300698-18300717 | None:intergenic | 35.0% | |
| GTATCAAATGAGCTTGGTAA+AGG | - | chr7_4:18300773-18300792 | Msa1143090:intron | 35.0% | |
| TCATTTCATTTCAACAGGAG+TGG | - | chr7_4:18301188-18301207 | Msa1143090:intron | 35.0% | |
| ACAGTAGCATATGTGAACAT+AGG | - | chr7_4:18301234-18301253 | Msa1143090:intron | 35.0% | |
| TACATCATAGGTATTCCTGT+TGG | - | chr7_4:18301264-18301283 | Msa1143090:intron | 35.0% | |
| ACATCATAGGTATTCCTGTT+GGG | - | chr7_4:18301265-18301284 | Msa1143090:intron | 35.0% | |
| !! | GAATTTTTCAGTCTCGTGTA+TGG | + | chr7_4:18301385-18301404 | None:intergenic | 35.0% |
| !! | AACATTTTCGATAGGGTATC+TGG | - | chr7_4:18301515-18301534 | Msa1143090:CDS | 35.0% |
| TAATCACCTACAAAACCAAC+TGG | - | chr7_4:18301584-18301603 | Msa1143090:intron | 35.0% | |
| AATCACCTACAAAACCAACT+GGG | - | chr7_4:18301585-18301604 | Msa1143090:intron | 35.0% | |
| TCTCATGTCATATGCTTTGA+TGG | - | chr7_4:18301904-18301923 | Msa1143090:CDS | 35.0% | |
| CTCATGTCATATGCTTTGAT+GGG | - | chr7_4:18301905-18301924 | Msa1143090:CDS | 35.0% | |
| ATCAACTTACAACCAACTGT+AGG | - | chr7_4:18302129-18302148 | Msa1143090:CDS | 35.0% | |
| CCAAAAACACTATTACTCTG+TGG | + | chr7_4:18302197-18302216 | None:intergenic | 35.0% | |
| ! | CCACAGAGTAATAGTGTTTT+TGG | - | chr7_4:18302194-18302213 | Msa1143090:CDS | 35.0% |
| ! | AATTCAGAATGGATTCATCG+TGG | - | chr7_4:18302225-18302244 | Msa1143090:CDS | 35.0% |
| ATGGAAATCTATGGGAATGA+GGG | + | chr7_4:18302315-18302334 | None:intergenic | 35.0% | |
| AATGGAAATCTATGGGAATG+AGG | + | chr7_4:18302316-18302335 | None:intergenic | 35.0% | |
| AAATGATCTTGAAGTAGAGG+TGG | + | chr7_4:18302342-18302361 | None:intergenic | 35.0% | |
| AGTGGTGAAGTGAAATGAAA+AGG | - | chr7_4:18302800-18302819 | Msa1143090:five_prime_UTR | 35.0% | |
| GTGGTGAAGTGAAATGAAAA+GGG | - | chr7_4:18302801-18302820 | Msa1143090:five_prime_UTR | 35.0% | |
| ! | ATCAAAGGTCAGTTTTCAAC+TGG | - | chr7_4:18302965-18302984 | Msa1143090:five_prime_UTR | 35.0% |
| ATTTGGACCAGTTAAAGTTG+GGG | + | chr7_4:18303002-18303021 | None:intergenic | 35.0% | |
| ! | AAACCGTAAACCTAAGTTGA+AGG | - | chr7_4:18303028-18303047 | Msa1143090:five_prime_UTR | 35.0% |
| GAACCTTCAACTTAGGTTTA+CGG | + | chr7_4:18303034-18303053 | None:intergenic | 35.0% | |
| TCTTCTTGAACCTTCAACTT+AGG | + | chr7_4:18303041-18303060 | None:intergenic | 35.0% | |
| ATTCTTAGCACAAGATGATG+AGG | + | chr7_4:18303094-18303113 | None:intergenic | 35.0% | |
| CAAGTTTCAACATAAGTGCA+CGG | + | chr7_4:18303172-18303191 | None:intergenic | 35.0% | |
| TCCTTATATCACATGTGTCC+CGG | + | chr7_4:18298926-18298945 | None:intergenic | 40.0% | |
| !! | TGGGTTTTTGATGACTTTGC+AGG | - | chr7_4:18299136-18299155 | Msa1143090:intron | 40.0% |
| TAGTGCTGCATAGAGTATGA+GGG | + | chr7_4:18299440-18299459 | None:intergenic | 40.0% | |
| TTAGTGCTGCATAGAGTATG+AGG | + | chr7_4:18299441-18299460 | None:intergenic | 40.0% | |
| ACACATATTGAAGACGTGTG+TGG | - | chr7_4:18299460-18299479 | Msa1143090:intron | 40.0% | |
| ATTCGTAGCAATGTTGTGTC+TGG | - | chr7_4:18299502-18299521 | Msa1143090:intron | 40.0% | |
| TCCATATGCTTGTCCACAAA+GGG | + | chr7_4:18299613-18299632 | None:intergenic | 40.0% | |
| GAAGAAGAACAAGTGCAGTT+AGG | + | chr7_4:18299692-18299711 | None:intergenic | 40.0% | |
| !! | ACCCCAATTTTGACACTCTT+AGG | - | chr7_4:18299729-18299748 | Msa1143090:intron | 40.0% |
| !! | GCCTAAGAGTGTCAAAATTG+GGG | + | chr7_4:18299733-18299752 | None:intergenic | 40.0% |
| !! | GGCCTAAGAGTGTCAAAATT+GGG | + | chr7_4:18299734-18299753 | None:intergenic | 40.0% |
| !! | TGGCCTAAGAGTGTCAAAAT+TGG | + | chr7_4:18299735-18299754 | None:intergenic | 40.0% |
| ! | GAAAGCATATCAGAAGTTGC+AGG | - | chr7_4:18299759-18299778 | Msa1143090:intron | 40.0% |
| TTGCAGGAAACATCTCTCTT+TGG | - | chr7_4:18299775-18299794 | Msa1143090:intron | 40.0% | |
| GAACACCATCATTGCATTCT+TGG | - | chr7_4:18299866-18299885 | Msa1143090:intron | 40.0% | |
| TCATTCATGCATTCCTCTCT+TGG | - | chr7_4:18299904-18299923 | Msa1143090:intron | 40.0% | |
| TCATTGTCAAAAGCCAAGAG+AGG | + | chr7_4:18299920-18299939 | None:intergenic | 40.0% | |
| GCATATTGGATTCCCAACAT+TGG | - | chr7_4:18299984-18300003 | Msa1143090:intron | 40.0% | |
| GAGAAACCTTTCCAAGTTTC+AGG | + | chr7_4:18300041-18300060 | None:intergenic | 40.0% | |
| AAAGTTTGACAACAGGCCAA+AGG | + | chr7_4:18300082-18300101 | None:intergenic | 40.0% | |
| GAAAGGGAAAGTTTGACAAC+AGG | + | chr7_4:18300089-18300108 | None:intergenic | 40.0% | |
| AGGGAACATGAAAAATGCTG+AGG | - | chr7_4:18300428-18300447 | Msa1143090:intron | 40.0% | |
| ACAGTCTCAACATCAATGGA+TGG | - | chr7_4:18300613-18300632 | Msa1143090:intron | 40.0% | |
| CAGTCTCAACATCAATGGAT+GGG | - | chr7_4:18300614-18300633 | Msa1143090:intron | 40.0% | |
| GAAAAAGGATGGATGGAAAG+GGG | + | chr7_4:18300696-18300715 | None:intergenic | 40.0% | |
| GTTCGAGTATCAAATGAGCT+TGG | - | chr7_4:18300767-18300786 | Msa1143090:intron | 40.0% | |
| CAAAAACAGAAAGGATCCGA+TGG | + | chr7_4:18300852-18300871 | None:intergenic | 40.0% | |
| TTTCACCTCGAATAAAGAGG+TGG | - | chr7_4:18300907-18300926 | Msa1143090:intron | 40.0% | |
| ! | TACTTTGTACCTGAGAGTAC+TGG | + | chr7_4:18300995-18301014 | None:intergenic | 40.0% |
| ATTTCAACAGGAGTGGCAAT+TGG | - | chr7_4:18301195-18301214 | Msa1143090:intron | 40.0% | |
| CATCATAGGTATTCCTGTTG+GGG | - | chr7_4:18301266-18301285 | Msa1143090:intron | 40.0% | |
| TGTTATCCATTGGCAAGTCA+AGG | - | chr7_4:18301302-18301321 | Msa1143090:CDS | 40.0% | |
| !! | TTTTCGATAGGGTATCTGGA+TGG | - | chr7_4:18301519-18301538 | Msa1143090:CDS | 40.0% |
| ! | TTTCGATAGGGTATCTGGAT+GGG | - | chr7_4:18301520-18301539 | Msa1143090:CDS | 40.0% |
| ATCTGGATGGGAATGTTGTT+TGG | - | chr7_4:18301532-18301551 | Msa1143090:CDS | 40.0% | |
| ACGACTAAATCATTCGTTGC+AGG | - | chr7_4:18301700-18301719 | Msa1143090:intron | 40.0% | |
| CATCTTGTGATGTGAACCTA+GGG | - | chr7_4:18301930-18301949 | Msa1143090:CDS | 40.0% | |
| ATACACCGGTCCAAACTAAA+GGG | + | chr7_4:18301957-18301976 | None:intergenic | 40.0% | |
| AGTTGGACCAAAACATACAC+CGG | + | chr7_4:18301971-18301990 | None:intergenic | 40.0% | |
| ! | GTCATTTAGCTGGTCTAAGT+TGG | + | chr7_4:18301988-18302007 | None:intergenic | 40.0% |
| GCAATATCAGGTCATTTAGC+TGG | + | chr7_4:18301998-18302017 | None:intergenic | 40.0% | |
| GCTAAATGACCTGATATTGC+AGG | - | chr7_4:18301998-18302017 | Msa1143090:CDS | 40.0% | |
| TGAACACAACCTGCAATATC+AGG | + | chr7_4:18302010-18302029 | None:intergenic | 40.0% | |
| TGGAAATCTATGGGAATGAG+GGG | + | chr7_4:18302314-18302333 | None:intergenic | 40.0% | |
| GTGGACGAATGGAAATCTAT+GGG | + | chr7_4:18302323-18302342 | None:intergenic | 40.0% | |
| ! | GAATTTGAGGTTGTTGTTGC+TGG | - | chr7_4:18302606-18302625 | Msa1143090:five_prime_UTR | 40.0% |
| ATCTGGATTACTGCAGTTTC+TGG | - | chr7_4:18302750-18302769 | Msa1143090:five_prime_UTR | 40.0% | |
| ACCGCACACTAGCAATATAT+GGG | + | chr7_4:18302858-18302877 | None:intergenic | 40.0% | |
| ! | AGTTTTCAACTGGTCCAAGT+TGG | - | chr7_4:18302975-18302994 | Msa1143090:five_prime_UTR | 40.0% |
| AGATGATGCGTATCTGACAC+CGG | - | chr7_4:18298904-18298923 | Msa1143090:three_prime_UTR | 45.0% | |
| ACCGGGACACATGTGATATA+AGG | - | chr7_4:18298922-18298941 | Msa1143090:three_prime_UTR | 45.0% | |
| AGTGCTGCATAGAGTATGAG+GGG | + | chr7_4:18299439-18299458 | None:intergenic | 45.0% | |
| ACCCTTTGTGGACAAGCATA+TGG | - | chr7_4:18299609-18299628 | Msa1143090:intron | 45.0% | |
| CTCCATATGCTTGTCCACAA+AGG | + | chr7_4:18299614-18299633 | None:intergenic | 45.0% | |
| CACCATCATTGCATTCTTGG+CGG | - | chr7_4:18299869-18299888 | Msa1143090:intron | 45.0% | |
| TTGCACCAGCAATCCCAAAT+TGG | + | chr7_4:18299947-18299966 | None:intergenic | 45.0% | |
| TGGTGTCCTGAAACTTGGAA+AGG | - | chr7_4:18300032-18300051 | Msa1143090:three_prime_UTR | 45.0% | |
| GTCAAACTTTCCCTTTCAGC+TGG | - | chr7_4:18300092-18300111 | Msa1143090:three_prime_UTR | 45.0% | |
| CACAACGATCGAGAACTTTG+CGG | + | chr7_4:18300810-18300829 | None:intergenic | 45.0% | |
| AGTGTTCAACCAGTACTCTC+AGG | - | chr7_4:18300983-18301002 | Msa1143090:CDS | 45.0% | |
| ATTCCTGTTGGGGTTGTTCT+TGG | - | chr7_4:18301276-18301295 | Msa1143090:intron | 45.0% | |
| TTACCAAGAACAACCCCAAC+AGG | + | chr7_4:18301282-18301301 | None:intergenic | 45.0% | |
| ATCCATTGGCAAGTCAAGGT+AGG | - | chr7_4:18301306-18301325 | Msa1143090:CDS | 45.0% | |
| !! | TGCAAAGGCACTTCAGTTGA+AGG | + | chr7_4:18301457-18301476 | None:intergenic | 45.0% |
| !!! | CTCATCCCAGTTGGTTTTGT+AGG | + | chr7_4:18301593-18301612 | None:intergenic | 45.0% |
| TTGATCAGTACTGTCCACCT+TGG | + | chr7_4:18301759-18301778 | None:intergenic | 45.0% | |
| CCTAGGTTCACATCACAAGA+TGG | + | chr7_4:18301932-18301951 | None:intergenic | 45.0% | |
| CCATCTTGTGATGTGAACCT+AGG | - | chr7_4:18301929-18301948 | Msa1143090:CDS | 45.0% | |
| AACCTAGGGTCCCTTTAGTT+TGG | - | chr7_4:18301944-18301963 | Msa1143090:CDS | 45.0% | |
| CATACACCGGTCCAAACTAA+AGG | + | chr7_4:18301958-18301977 | None:intergenic | 45.0% | |
| ! | GTTTGGACCGGTGTATGTTT+TGG | - | chr7_4:18301961-18301980 | Msa1143090:CDS | 45.0% |
| TTACTCTGTGGGGAAGAAGT+CGG | + | chr7_4:18302185-18302204 | None:intergenic | 45.0% | |
| GGTGGACGAATGGAAATCTA+TGG | + | chr7_4:18302324-18302343 | None:intergenic | 45.0% | |
| TTGAAGTAGAGGTGGACGAA+TGG | + | chr7_4:18302334-18302353 | None:intergenic | 45.0% | |
| GGAAGAACGAAGATATCGAG+TGG | + | chr7_4:18302423-18302442 | None:intergenic | 45.0% | |
| GCCCATATATTGCTAGTGTG+CGG | - | chr7_4:18302854-18302873 | Msa1143090:five_prime_UTR | 45.0% | |
| GACCGCACACTAGCAATATA+TGG | + | chr7_4:18302859-18302878 | None:intergenic | 45.0% | |
| GGTCAGTCTTACACTAGGTA+TGG | - | chr7_4:18302875-18302894 | Msa1143090:five_prime_UTR | 45.0% | |
| GTTAAAGTTGGGGTCCAACT+TGG | + | chr7_4:18302992-18303011 | None:intergenic | 45.0% | |
| AGTTGGACCCCAACTTTAAC+TGG | - | chr7_4:18302992-18303011 | Msa1143090:five_prime_UTR | 45.0% | |
| ACAAGATGATGAGGACCTTC+AGG | + | chr7_4:18303085-18303104 | None:intergenic | 45.0% | |
| !! | ATAATATTAATTAATATAGA+CGG | + | chr7_4:18302945-18302964 | None:intergenic | 5.0% |
| !! | ATTAATTAATATTATATCAA+AGG | - | chr7_4:18302950-18302969 | Msa1143090:five_prime_UTR | 5.0% |
| GATGATGCGTATCTGACACC+GGG | - | chr7_4:18298905-18298924 | Msa1143090:three_prime_UTR | 50.0% | |
| GGGGTTGTGAAGACAAACAC+AGG | + | chr7_4:18299714-18299733 | None:intergenic | 50.0% | |
| AGCCGCCAAGAATGCAATGA+TGG | + | chr7_4:18299874-18299893 | None:intergenic | 50.0% | |
| ! | GTGGTTGGTGTCCTGAAACT+TGG | - | chr7_4:18300027-18300046 | Msa1143090:three_prime_UTR | 50.0% |
| CAACATTGCGCCAGCTGAAA+GGG | + | chr7_4:18300105-18300124 | None:intergenic | 50.0% | |
| ACAACATTGCGCCAGCTGAA+AGG | + | chr7_4:18300106-18300125 | None:intergenic | 50.0% | |
| TTTCAGCTGGCGCAATGTTG+TGG | - | chr7_4:18300105-18300124 | Msa1143090:three_prime_UTR | 50.0% | |
| TTGGTTTCATGGCTGCAGCA+AGG | - | chr7_4:18300652-18300671 | Msa1143090:CDS | 50.0% | |
| AGGATGGATGGAAAGGGGAT+CGG | + | chr7_4:18300691-18300710 | None:intergenic | 50.0% | |
| TGTGACAGTGCTTACGTCGT+TGG | - | chr7_4:18300826-18300845 | Msa1143090:intron | 50.0% | |
| CGATAATTCTCCGACAGCTG+CGG | + | chr7_4:18300933-18300952 | None:intergenic | 50.0% | |
| !! | AGCCTACCTTGACTTGCCAA+TGG | + | chr7_4:18301311-18301330 | None:intergenic | 50.0% |
| CAAAACCAACTGGGATGAGC+AGG | - | chr7_4:18301594-18301613 | Msa1143090:intron | 50.0% | |
| TCATACCTGCTCATCCCAGT+TGG | + | chr7_4:18301602-18301621 | None:intergenic | 50.0% | |
| TAGCTCGCAAGCGTGTAAAC+AGG | - | chr7_4:18301729-18301748 | Msa1143090:intron | 50.0% | |
| TGTAAACAGGTGGTCCAAGG+TGG | - | chr7_4:18301742-18301761 | Msa1143090:intron | 50.0% | |
| TGCTGAGTTATGCAGCCAAG+AGG | - | chr7_4:18301835-18301854 | Msa1143090:CDS | 50.0% | |
| GTCCAAACTAAAGGGACCCT+AGG | + | chr7_4:18301949-18301968 | None:intergenic | 50.0% | |
| !! | AGGGTCCCTTTAGTTTGGAC+CGG | - | chr7_4:18301949-18301968 | Msa1143090:CDS | 50.0% |
| GGAAGAAGTCGGGGTAGAAT+TGG | + | chr7_4:18302174-18302193 | None:intergenic | 50.0% | |
| TACTCTGTGGGGAAGAAGTC+GGG | + | chr7_4:18302184-18302203 | None:intergenic | 50.0% | |
| TGTGCGGTCAGTCTTACACT+AGG | - | chr7_4:18302870-18302889 | Msa1143090:five_prime_UTR | 50.0% | |
| GTGCTTACGTCGTTGGCCAT+CGG | - | chr7_4:18300833-18300852 | Msa1143090:intron | 55.0% | |
| TGCGGCCACCTCTTTATTCG+AGG | + | chr7_4:18300915-18300934 | None:intergenic | 55.0% | |
| ACAGGAGTGGCAATTGGAGC+AGG | - | chr7_4:18301201-18301220 | Msa1143090:intron | 55.0% | |
| CAGGAGTGGCAATTGGAGCA+GGG | - | chr7_4:18301202-18301221 | Msa1143090:intron | 55.0% | |
| CTCGCAAGCGTGTAAACAGG+TGG | - | chr7_4:18301732-18301751 | Msa1143090:intron | 55.0% | |
| GCGTGTAAACAGGTGGTCCA+AGG | - | chr7_4:18301739-18301758 | Msa1143090:intron | 55.0% | |
| ACTCTGTGGGGAAGAAGTCG+GGG | + | chr7_4:18302183-18302202 | None:intergenic | 55.0% | |
| GTTGGGAATGGCGACTGCGT+TGG | - | chr7_4:18299584-18299603 | Msa1143090:intron | 60.0% | |
| ! | ACTGCGTTGGCGACCCTTTG+TGG | - | chr7_4:18299597-18299616 | Msa1143090:intron | 60.0% |
| AAAGAGGTGGCCGCAGCTGT+CGG | - | chr7_4:18300920-18300939 | Msa1143090:intron | 60.0% | |
| GAGTGGCAATTGGAGCAGGG+TGG | - | chr7_4:18301205-18301224 | Msa1143090:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 18298770 | 18303191 | 18298770 | ID=Msa1143090;Name=Msa1143090 |
| chr7_4 | mRNA | 18298770 | 18303191 | 18298770 | ID=Msa1143090-mRNA-1;Parent=Msa1143090;Name=Msa1143090-mRNA-1;_AED=0.10;_eAED=0.10;_QI=821|1|1|1|0.85|0.75|8|312|403 |
| chr7_4 | exon | 18298770 | 18298949 | 18298770 | ID=Msa1143090-mRNA-1:exon:4082;Parent=Msa1143090-mRNA-1 |
| chr7_4 | exon | 18300021 | 18300239 | 18300021 | ID=Msa1143090-mRNA-1:exon:4081;Parent=Msa1143090-mRNA-1 |
| chr7_4 | exon | 18300346 | 18300432 | 18300346 | ID=Msa1143090-mRNA-1:exon:4080;Parent=Msa1143090-mRNA-1 |
| chr7_4 | exon | 18300638 | 18300756 | 18300638 | ID=Msa1143090-mRNA-1:exon:4079;Parent=Msa1143090-mRNA-1 |
| chr7_4 | exon | 18300957 | 18301195 | 18300957 | ID=Msa1143090-mRNA-1:exon:4078;Parent=Msa1143090-mRNA-1 |
| chr7_4 | exon | 18301288 | 18301344 | 18301288 | ID=Msa1143090-mRNA-1:exon:4077;Parent=Msa1143090-mRNA-1 |
| chr7_4 | exon | 18301486 | 18301572 | 18301486 | ID=Msa1143090-mRNA-1:exon:4076;Parent=Msa1143090-mRNA-1 |
| chr7_4 | exon | 18301835 | 18303191 | 18301835 | ID=Msa1143090-mRNA-1:exon:4075;Parent=Msa1143090-mRNA-1 |
| chr7_4 | five_prime_UTR | 18302371 | 18303191 | 18302371 | ID=Msa1143090-mRNA-1:five_prime_utr;Parent=Msa1143090-mRNA-1 |
| chr7_4 | CDS | 18301835 | 18302370 | 18301835 | ID=Msa1143090-mRNA-1:cds;Parent=Msa1143090-mRNA-1 |
| chr7_4 | CDS | 18301486 | 18301572 | 18301486 | ID=Msa1143090-mRNA-1:cds;Parent=Msa1143090-mRNA-1 |
| chr7_4 | CDS | 18301288 | 18301344 | 18301288 | ID=Msa1143090-mRNA-1:cds;Parent=Msa1143090-mRNA-1 |
| chr7_4 | CDS | 18300957 | 18301195 | 18300957 | ID=Msa1143090-mRNA-1:cds;Parent=Msa1143090-mRNA-1 |
| chr7_4 | CDS | 18300638 | 18300756 | 18300638 | ID=Msa1143090-mRNA-1:cds;Parent=Msa1143090-mRNA-1 |
| chr7_4 | CDS | 18300346 | 18300432 | 18300346 | ID=Msa1143090-mRNA-1:cds;Parent=Msa1143090-mRNA-1 |
| chr7_4 | CDS | 18300153 | 18300239 | 18300153 | ID=Msa1143090-mRNA-1:cds;Parent=Msa1143090-mRNA-1 |
| chr7_4 | three_prime_UTR | 18300021 | 18300152 | 18300021 | ID=Msa1143090-mRNA-1:three_prime_utr;Parent=Msa1143090-mRNA-1 |
| chr7_4 | three_prime_UTR | 18298770 | 18298949 | 18298770 | ID=Msa1143090-mRNA-1:three_prime_utr;Parent=Msa1143090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
