AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0490130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0490130 MtrunA17_Chr3g0080761 95.639 665 22 4 1 659 1 664 0.0 1318
Msa0490130 MtrunA17_Chr8g0354821 59.797 689 227 9 15 658 4 687 0.0 841
Msa0490130 MtrunA17_Chr7g0255181 46.794 733 286 18 1 658 1 704 0.0 633
Msa0490130 MtrunA17_Chr5g0399801 41.527 537 292 13 125 656 567 1086 4.02e-122 389
Msa0490130 MtrunA17_Chr4g0003501 40.301 531 292 15 133 658 444 954 4.45e-114 364
Msa0490130 MtrunA17_Chr4g0003511 39.703 539 302 14 125 658 531 1051 5.27e-112 361
Msa0490130 MtrunA17_Chr8g0368901 41.239 468 255 12 174 631 299 756 9.10e-110 348
Msa0490130 MtrunA17_Chr8g0368911 40.546 476 251 12 172 631 290 749 9.79e-110 348
Msa0490130 MtrunA17_Chr1g0163051 37.058 537 299 14 108 631 135 645 2.06e-106 336
Msa0490130 MtrunA17_Chr8g0369301 36.007 561 316 15 94 631 196 736 2.61e-104 333
Msa0490130 MtrunA17_Chr6g0476111 37.475 507 284 13 171 655 195 690 3.34e-97 313
Msa0490130 MtrunA17_Chr6g0476121 36.686 507 288 13 171 655 144 639 1.06e-94 305
Msa0490130 MtrunA17_Chr7g0252211 36.957 506 293 11 169 655 255 753 1.10e-93 305
Msa0490130 MtrunA17_Chr1g0163041 34.766 512 300 14 139 631 68 564 6.12e-91 293
Msa0490130 MtrunA17_Chr6g0467381 35.115 524 289 13 139 631 60 563 1.37e-89 290
Msa0490130 MtrunA17_Chr6g0467531 36.179 492 279 12 157 633 94 565 6.00e-89 288
Msa0490130 MtrunA17_Chr6g0467421 34.924 524 290 13 139 631 60 563 8.59e-89 288
Msa0490130 MtrunA17_Chr6g0467401 34.924 524 290 13 139 631 60 563 1.71e-87 284
Msa0490130 MtrunA17_Chr3g0094881 35.098 510 291 14 135 633 144 624 2.70e-84 278
Msa0490130 MtrunA17_Chr6g0467411 32.994 491 279 13 155 633 31 483 6.83e-71 238
Msa0490130 MtrunA17_Chr2g0306961 31.641 512 277 11 139 633 9 464 4.34e-70 235
Msa0490130 MtrunA17_Chr1g0170651 34.151 489 262 13 189 658 98 545 2.35e-66 228
Msa0490130 MtrunA17_Chr7g0232811 30.037 546 270 19 135 654 75 534 1.40e-61 214
Msa0490130 MtrunA17_Chr7g0232981 29.301 529 273 17 135 654 75 511 3.36e-54 193
Msa0490130 MtrunA17_Chr7g0232841 29.068 547 260 21 135 654 78 523 1.49e-52 189
Msa0490130 MtrunA17_Chr5g0403241 31.562 320 168 9 370 658 1207 1506 1.74e-32 134
Msa0490130 MtrunA17_Chr1g0190311 27.811 338 168 11 372 655 325 640 5.04e-31 129
Msa0490130 MtrunA17_Chr8g0373821 29.193 322 177 9 359 654 237 533 4.19e-29 122
Msa0490130 MtrunA17_Chr1g0183321 28.743 334 169 10 372 655 428 742 1.82e-28 121
Msa0490130 MtrunA17_Chr4g0075321 34.703 219 114 5 445 658 869 1063 8.75e-28 119
Msa0490130 MtrunA17_Chr7g0262001 28.049 328 173 7 374 655 388 698 1.28e-25 112
Msa0490130 MtrunA17_Chr7g0232751 37.963 108 63 2 549 654 9 114 5.25e-16 74.7
Msa0490130 MtrunA17_Chr2g0305371 30.928 194 96 5 463 656 314 469 2.68e-15 79.3
Msa0490130 MtrunA17_Chr7g0232761 28.856 201 115 8 135 329 91 269 6.65e-12 66.6
Msa0490130 MtrunA17_Chr7g0232871 38.667 75 39 2 477 547 16 87 2.81e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0490130 AT5G04940.2 56.281 597 236 9 65 658 95 669 0.0 684
Msa0490130 AT5G04940.1 56.281 597 236 9 65 658 95 669 0.0 684
Msa0490130 AT1G73100.1 51.180 678 291 10 6 658 6 668 0.0 682
Msa0490130 AT1G17770.1 43.351 579 292 12 98 659 134 693 2.69e-154 462
Msa0490130 AT2G24740.1 44.732 541 250 14 129 658 252 754 8.55e-147 444
Msa0490130 AT2G35160.5 37.730 599 307 20 70 658 215 757 7.91e-112 354
Msa0490130 AT2G35160.2 37.730 599 307 20 70 658 251 793 2.12e-111 353
Msa0490130 AT2G35160.3 37.730 599 307 20 70 658 251 793 2.12e-111 353
Msa0490130 AT2G35160.1 37.730 599 307 20 70 658 251 793 2.12e-111 353
Msa0490130 AT2G35160.4 37.730 599 307 20 70 658 251 793 2.12e-111 353
Msa0490130 AT4G13460.1 39.130 506 282 13 139 631 145 637 7.60e-108 340
Msa0490130 AT4G13460.2 39.130 506 282 13 139 631 145 637 7.60e-108 340
Msa0490130 AT2G33290.1 38.976 508 296 8 139 640 149 648 1.40e-106 337
Msa0490130 AT2G33290.3 38.976 508 296 8 139 640 149 648 1.40e-106 337
Msa0490130 AT2G33290.4 38.976 508 296 8 139 640 149 648 1.40e-106 337
Msa0490130 AT2G33290.2 38.976 508 296 8 139 640 149 648 1.40e-106 337
Msa0490130 AT2G22740.2 37.782 532 301 13 139 655 270 786 6.10e-106 339
Msa0490130 AT2G22740.1 37.782 532 301 13 139 655 270 786 6.10e-106 339
Msa0490130 AT5G13960.2 36.214 486 277 14 192 655 12 486 1.05e-91 293
Msa0490130 AT5G13960.1 35.294 510 297 14 168 655 122 620 1.09e-90 295
Msa0490130 AT2G05900.1 41.176 221 121 4 212 428 1 216 4.59e-45 163
Msa0490130 AT2G05900.1 56.098 82 30 1 577 658 236 311 1.73e-22 99.4
Msa0490130 AT5G47150.1 41.589 214 113 5 139 347 118 324 3.78e-41 153
Msa0490130 AT3G04380.2 28.012 332 174 8 372 655 117 431 3.98e-36 142
Msa0490130 AT3G04380.4 28.012 332 174 8 372 655 144 458 4.41e-36 142
Msa0490130 AT3G04380.1 28.012 332 174 8 372 655 144 458 4.64e-36 142
Msa0490130 AT3G04380.3 28.012 332 174 8 372 655 128 442 4.69e-36 142
Msa0490130 AT3G04380.5 28.012 332 174 8 372 655 101 415 4.95e-36 141
Msa0490130 AT3G04380.6 28.012 332 174 8 372 655 117 431 5.21e-36 141
Msa0490130 AT5G47160.1 37.302 252 139 7 103 344 166 408 2.26e-34 136
Msa0490130 AT5G47160.3 37.302 252 139 7 103 344 166 408 2.26e-34 136
Msa0490130 AT5G47160.2 37.302 252 139 7 103 344 166 408 2.26e-34 136
Msa0490130 AT2G23740.1 32.602 319 165 15 368 659 1080 1375 4.52e-33 137
Msa0490130 AT2G23740.3 32.602 319 165 15 368 659 1087 1382 4.57e-33 137
Msa0490130 AT2G23740.6 32.602 319 165 15 368 659 1087 1382 4.57e-33 137
Msa0490130 AT2G23740.2 32.602 319 165 15 368 659 1087 1382 4.57e-33 137
Msa0490130 AT1G04050.3 30.539 334 161 12 372 655 303 615 1.55e-31 130
Msa0490130 AT1G04050.2 31.045 335 158 14 372 655 407 719 1.85e-31 131
Msa0490130 AT1G04050.1 31.045 335 158 14 372 655 407 719 1.85e-31 131
Msa0490130 AT5G43990.16 28.144 334 166 12 372 655 373 682 1.40e-28 122
Msa0490130 AT5G43990.5 28.144 334 166 12 372 655 373 682 1.40e-28 122
Msa0490130 AT5G43990.17 28.144 334 166 12 372 655 373 682 1.40e-28 122
Msa0490130 AT5G43990.14 28.144 334 166 12 372 655 373 682 1.40e-28 122
Msa0490130 AT5G43990.3 28.144 334 166 12 372 655 393 702 1.47e-28 122
Msa0490130 AT5G43990.11 28.144 334 166 12 372 655 393 702 1.47e-28 122
Msa0490130 AT5G43990.1 28.144 334 166 12 372 655 393 702 1.47e-28 122
Msa0490130 AT5G43990.4 28.144 334 166 12 372 655 393 702 1.47e-28 122
Msa0490130 AT5G43990.8 28.144 334 166 12 372 655 324 633 1.57e-28 121
Msa0490130 AT5G43990.12 28.144 334 166 12 372 655 324 633 1.57e-28 121
Msa0490130 AT5G43990.6 28.144 334 166 12 372 655 324 633 1.57e-28 121
Msa0490130 AT5G43990.13 28.144 334 166 12 372 655 324 633 1.57e-28 121
Msa0490130 AT5G43990.7 28.144 334 166 12 372 655 304 613 1.59e-28 121
Msa0490130 AT5G43990.15 28.144 334 166 12 372 655 396 705 1.72e-28 122
Msa0490130 AT5G43990.10 28.144 334 166 12 372 655 396 705 1.72e-28 122
Msa0490130 AT5G43990.9 28.144 334 166 12 372 655 416 725 1.86e-28 121
Msa0490130 AT5G43990.2 28.144 334 166 12 372 655 416 725 1.86e-28 121
Msa0490130 AT3G03750.2 33.186 226 128 7 435 658 145 349 6.30e-25 107
Msa0490130 AT2G23740.4 32.932 249 119 14 368 589 1087 1314 2.58e-21 100
Msa0490130 AT2G23740.5 32.932 249 119 14 368 589 1087 1314 2.58e-21 100
Msa0490130 AT3G03750.1 29.911 224 122 7 435 658 145 333 1.69e-18 87.8
Msa0490130 AT1G76710.2 32.020 203 88 7 462 656 66 226 1.70e-16 83.2
Msa0490130 AT1G76710.1 32.020 203 88 7 462 656 66 226 1.70e-16 83.2
Msa0490130 AT1G77300.2 30.890 191 98 5 466 656 1008 1164 2.01e-16 84.3
Msa0490130 AT1G76710.3 32.020 203 88 7 462 656 66 226 2.44e-16 82.8
Msa0490130 AT1G76710.4 32.020 203 88 7 462 656 66 226 2.69e-16 82.8
Msa0490130 AT1G77300.1 30.890 191 98 5 466 656 1008 1164 2.90e-16 84.0
Msa0490130 AT4G30860.1 30.256 195 96 6 463 656 307 462 7.35e-14 75.1
Msa0490130 AT3G59960.3 28.333 180 75 6 485 655 112 246 7.87e-12 67.0
Msa0490130 AT3G59960.2 28.333 180 75 6 485 655 112 246 7.87e-12 67.0
Msa0490130 AT3G59960.4 28.333 180 75 6 485 655 112 246 7.87e-12 67.0
Msa0490130 AT3G59960.1 28.333 180 75 6 485 655 112 246 2.64e-11 65.9

Find 168 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCAGGTCAGTATCCTTC+TGG 0.204050 3_4:-11512716 Msa0490130:CDS
ACAGGTATCAAACTTCTTAT+AGG 0.235001 3_4:+11512764 None:intergenic
CGACTCCACTTCAAGCATTT+AGG 0.258428 3_4:-11512625 Msa0490130:CDS
CAAGCATTTAGGAGCCCTTT+TGG 0.274971 3_4:-11512614 Msa0490130:CDS
CATTGACAAGTATAAGATTC+TGG 0.293840 3_4:-11512795 Msa0490130:CDS
AGAGTGGAAATATGTGAAAA+AGG 0.306165 3_4:+11511650 None:intergenic
TGCATTAAACTGAATGATTT+CGG 0.306178 3_4:+11511618 None:intergenic
CATGAGTTAACATATGATTA+TGG 0.312052 3_4:-11510970 Msa0490130:CDS
TGTATAAAATTCAAGATTCA+TGG 0.343226 3_4:-11511884 Msa0490130:CDS
TTCTTAGCATTTATAATAAG+AGG 0.346128 3_4:+11511126 None:intergenic
AGCATGTGTCCCTGGCGATT+TGG 0.346957 3_4:-11511562 Msa0490130:CDS
AGAACTCCATTGATAATATA+CGG 0.356399 3_4:+11511504 None:intergenic
CGAATGGAAATGTGTGTTAT+CGG 0.357207 3_4:-11512215 Msa0490130:CDS
CTTCAGGTCAGTATCCTTCT+GGG 0.359790 3_4:-11512715 Msa0490130:CDS
AACCTAGTGCCTTTGCCGTT+TGG 0.360454 3_4:-11511800 Msa0490130:CDS
GTATATTATCAATGGAGTTC+TGG 0.362491 3_4:-11511502 Msa0490130:CDS
TTTGGTGCTTCAAACCGGTT+TGG 0.365259 3_4:+11511406 None:intergenic
AGGATAAAGGTTGGGGTCTT+CGG 0.367552 3_4:-11511365 Msa0490130:CDS
TCATAAGGGTAATCTTGCTT+TGG 0.385063 3_4:-11512000 Msa0490130:CDS
CAAAACAAAGGATAAAGGTT+GGG 0.388648 3_4:-11511373 Msa0490130:CDS
TTGGTGCTTCAAACCGGTTT+GGG 0.391461 3_4:+11511407 None:intergenic
AATCCTCAAGGTCAATCTTC+AGG 0.392097 3_4:-11512731 Msa0490130:CDS
TGTTATAATTTATACCGGTC+AGG 0.396575 3_4:-11512069 Msa0490130:CDS
TGTGTTTGTTCGAATTCCTT+TGG 0.402301 3_4:+11512292 None:intergenic
GATTGATGCCTTGCATATCC+AGG 0.403598 3_4:-11512168 Msa0490130:CDS
ACTTGAAAGATTCATAAATA+CGG 0.407062 3_4:+11511220 None:intergenic
CAGTACCTGGAGTTGAGATT+GGG 0.418871 3_4:-11512253 Msa0490130:CDS
ACAGGCTGCCAGAAAACATT+TGG 0.419329 3_4:+11511063 None:intergenic
ATTTGGACTGCTCATGCATT+CGG 0.422721 3_4:-11511545 Msa0490130:CDS
TACCATTGTCTCTTTGACCT+GGG 0.423334 3_4:+11512450 None:intergenic
TCAGTACCTGGAGTTGAGAT+TGG 0.424381 3_4:-11512254 Msa0490130:CDS
CGAACCCGTGTTCAATTCCT+TGG 0.424960 3_4:+11512355 None:intergenic
TTCCATTTGGTGCTTCAAAC+CGG 0.425045 3_4:+11511401 None:intergenic
CGGTTTGCATGCTCAATCCA+TGG 0.428182 3_4:-11512195 Msa0490130:CDS
ATTATAAATGCTAAGAATGT+TGG 0.437154 3_4:-11511120 Msa0490130:CDS
GCTGTTAGCATTGTTTCGTC+AGG 0.439867 3_4:-11512122 Msa0490130:CDS
AGAATAAGTCCAGTCCTTGC+AGG 0.449322 3_4:+11511747 None:intergenic
AAGGTTGGGGTCTTCGGTCA+TGG 0.451618 3_4:-11511359 Msa0490130:CDS
GCTGGTTTCCCTGCAAGGAC+TGG 0.456055 3_4:-11511756 Msa0490130:CDS
ATAAAAGCACCAGCACGAAT+AGG 0.460396 3_4:+11511333 None:intergenic
TTACCATTGTCTCTTTGACC+TGG 0.461172 3_4:+11512449 None:intergenic
GTGTTCAAAACAAAGGATAA+AGG 0.462890 3_4:-11511378 Msa0490130:CDS
CGATAACACACATTTCCATT+CGG 0.476797 3_4:+11512216 None:intergenic
TATTCTTGCTGACCTCTCCT+CGG 0.477270 3_4:-11511730 Msa0490130:CDS
AGATCCTCATCCTCTCCAAA+AGG 0.481832 3_4:+11512599 None:intergenic
GTATCATGAGGTCCACCAAA+TGG 0.483316 3_4:+11512677 None:intergenic
CTTGAAAGATTCATAAATAC+GGG 0.486596 3_4:+11511221 None:intergenic
GTCAGATCAGAAGCTTCATA+AGG 0.487005 3_4:-11512015 Msa0490130:CDS
CATGAGCAGTCCAAATCGCC+AGG 0.488074 3_4:+11511552 None:intergenic
ACTTCATTGACAAGGGATAC+AGG 0.490029 3_4:+11511693 None:intergenic
GTTGATATGAGTGGTTTAGT+TGG 0.492160 3_4:-11512479 Msa0490130:CDS
TGTATAATGGAAGAAGGGTT+AGG 0.492317 3_4:-11512845 None:intergenic
TTGTTCTCTTCATATAAGAC+AGG 0.494732 3_4:+11511045 None:intergenic
CAGAATCTTATACTTGTCAA+TGG 0.495015 3_4:+11512796 None:intergenic
GCACAATATTAACAACTTCA+CGG 0.500326 3_4:+11512426 None:intergenic
TGCATATCCAGGGTGACCGC+GGG 0.500357 3_4:-11512157 Msa0490130:CDS
GGTTTGCATGCTCAATCCAT+GGG 0.501866 3_4:-11512194 Msa0490130:CDS
TCACAGCATCTTTGATGCCT+CGG 0.503981 3_4:+11511940 None:intergenic
TATCATGAGGTCCACCAAAT+GGG 0.505449 3_4:+11512678 None:intergenic
AACCGGTTTGAAGCACCAAA+TGG 0.508329 3_4:-11511403 Msa0490130:CDS
TCTGTTCAGAAGTGGAAAGC+TGG 0.508734 3_4:-11511774 Msa0490130:CDS
TCATGGGATCCTATTCGTGC+TGG 0.510420 3_4:-11511342 Msa0490130:CDS
ATCAAAGATGCTGTGACTCC+AGG 0.511194 3_4:-11511933 Msa0490130:CDS
GGTGATGTTATAATTTATAC+CGG 0.512209 3_4:-11512074 Msa0490130:CDS
TATCTTCCCCGCGGTCACCC+TGG 0.516259 3_4:+11512150 None:intergenic
ATTCTTGCTGACCTCTCCTC+GGG 0.517115 3_4:-11511729 Msa0490130:CDS
GTGAATTGTATAATGGAAGA+AGG 0.518785 3_4:-11512851 None:intergenic
TCAATGGAGTTCTGGCGAAT+CGG 0.519477 3_4:-11511494 Msa0490130:CDS
GTATAAAATTCAAGATTCAT+GGG 0.521482 3_4:-11511883 Msa0490130:CDS
AGGTTGGGGTCTTCGGTCAT+GGG 0.522878 3_4:-11511358 Msa0490130:CDS
TATAAGTTGATAAGAGTGCC+TGG 0.523531 3_4:-11511825 Msa0490130:CDS
TTTGCGTGCACTGCTACCCT+CGG 0.525087 3_4:+11510936 None:intergenic
TCAACACTCAGTTCCTCCCC+CGG 0.526455 3_4:-11512822 Msa0490130:CDS
TGACCGCGGGGAAGATACTT+TGG 0.527412 3_4:-11512144 Msa0490130:CDS
GGTTTAGTTGGTATAAGCCC+AGG 0.529198 3_4:-11512467 Msa0490130:CDS
TGCATGCTCAATCCATGGGG+GGG 0.529678 3_4:-11512190 Msa0490130:CDS
AAACGTACCGATTTAAAAGC+TGG 0.530169 3_4:-11512329 Msa0490130:CDS
GTTGAAATTCCCACCCTGAC+CGG 0.530593 3_4:+11512055 None:intergenic
TCATATGTTAACTCATGCAT+TGG 0.532861 3_4:+11510976 None:intergenic
CGGCAGCATCACATTCAAGC+CGG 0.533696 3_4:-11512541 Msa0490130:CDS
TCAAAACAAAGGATAAAGGT+TGG 0.534159 3_4:-11511374 Msa0490130:CDS
GGTAGAAAGAAATGCTTATG+TGG 0.534383 3_4:-11510913 Msa0490130:CDS
TCAGATCAGAAGCTTCATAA+GGG 0.535931 3_4:-11512014 Msa0490130:CDS
ACTGCTACCCTCGGTGTGAT+CGG 0.536665 3_4:+11510945 None:intergenic
CATTTGATGCGCTAAGAAGA+AGG 0.540823 3_4:-11512397 Msa0490130:CDS
AAAACAAAGGATAAAGGTTG+GGG 0.541211 3_4:-11511372 Msa0490130:CDS
ATGTTAACTCATGCATTGGT+GGG 0.541447 3_4:+11510980 None:intergenic
GGAGTCGGCATCACTCTACT+TGG 0.541904 3_4:+11512641 None:intergenic
CGTTATCGACTTCATTGACA+AGG 0.541988 3_4:+11511685 None:intergenic
GGCAATATTTGTATGACCAA+AGG 0.542268 3_4:-11512308 Msa0490130:CDS
GGAAAGCTGGTTTCCCTGCA+AGG 0.545796 3_4:-11511761 Msa0490130:CDS
GACTCTCGGCTCCCGAGGAG+AGG 0.546001 3_4:+11511718 None:intergenic
TCATGCATTCGGAGAAATGA+AGG 0.546789 3_4:-11511534 Msa0490130:CDS
ATCTCAACTTGTAGATGCCA+AGG 0.547043 3_4:-11512372 Msa0490130:CDS
ATGCAACATGGAGAAAGGAT+TGG 0.548940 3_4:+11511022 None:intergenic
TTCCAAACGGCAAAGGCACT+AGG 0.550397 3_4:+11511798 None:intergenic
GATCCTCATCCTCTCCAAAA+GGG 0.552939 3_4:+11512600 None:intergenic
TTTGGAAATCTGTTCAGAAG+TGG 0.553589 3_4:-11511782 Msa0490130:CDS
ATGTCCCCAATCTCAACTCC+AGG 0.554821 3_4:+11512248 None:intergenic
TCTTAGCATTTATAATAAGA+GGG 0.554977 3_4:+11511127 None:intergenic
GGCAGCATCACATTCAAGCC+GGG 0.555680 3_4:-11512540 Msa0490130:CDS
GTATTTATGAATCTTTCAAG+TGG 0.556979 3_4:-11511218 Msa0490130:CDS
GCAAAGGCACTAGGTTGTCC+AGG 0.558915 3_4:+11511807 None:intergenic
TTATACTTGTCAATGGAACC+CGG 0.562427 3_4:+11512803 None:intergenic
GGTCAGATTGAAGAAGCATA+AGG 0.562915 3_4:-11512519 Msa0490130:CDS
TCACATAGTTGCAGCTGTAG+TGG 0.565201 3_4:-11511591 Msa0490130:CDS
GCATTTATAATAAGAGGGTG+TGG 0.566087 3_4:+11511132 None:intergenic
CTAAATGCTTGAAGTGGAGT+CGG 0.566439 3_4:+11512626 None:intergenic
GAGAAGTTATCGATAAAGCT+AGG 0.566713 3_4:-11511296 Msa0490130:CDS
GTTATAATTTATACCGGTCA+GGG 0.567735 3_4:-11512068 Msa0490130:CDS
ATTTCGGATGTCTAAGAGAG+TGG 0.569188 3_4:+11511634 None:intergenic
AAGCCGTTGGTTCATGAATG+TGG 0.569854 3_4:-11511471 Msa0490130:CDS
GAGGATCTCAATGACAATGA+TGG 0.572099 3_4:-11512584 Msa0490130:CDS
TATGCTTCTTCAATCTGACC+CGG 0.573333 3_4:+11512522 None:intergenic
TATGTTAACTCATGCATTGG+TGG 0.574648 3_4:+11510979 None:intergenic
TCGAACAAACACAGCGAAGA+GGG 0.575127 3_4:-11512282 Msa0490130:CDS
TTGCATATCCAGGGTGACCG+CGG 0.575259 3_4:-11512158 Msa0490130:CDS
GCCTAAGTTACTAGAAGAAG+CGG 0.581948 3_4:-11511187 Msa0490130:CDS
TTAAATCAGCTTGTACAAGA+AGG 0.586118 3_4:-11511273 Msa0490130:CDS
AACAGATTTCCAAACGGCAA+AGG 0.589578 3_4:+11511791 None:intergenic
GGGCTCCTAAATGCTTGAAG+TGG 0.589829 3_4:+11512620 None:intergenic
TGAATTGTATAATGGAAGAA+GGG 0.593495 3_4:-11512850 None:intergenic
AATGGAAGTGTTCAAAACAA+AGG 0.598701 3_4:-11511385 Msa0490130:CDS
CTTCTGAACAGATTTCCAAA+CGG 0.599772 3_4:+11511785 None:intergenic
TATACTTGTCAATGGAACCC+GGG 0.600215 3_4:+11512804 None:intergenic
TGACCTGAAGATTGACCTTG+AGG 0.600787 3_4:+11512728 None:intergenic
GAATAAGTCCAGTCCTTGCA+GGG 0.601962 3_4:+11511748 None:intergenic
AAGAGGGTAGGATCAGTACC+TGG 0.602661 3_4:-11512266 Msa0490130:CDS
GGTCACAAATGAGTCTAATG+AGG 0.609516 3_4:-11511166 Msa0490130:CDS
GGGCCACATTCATGAACCAA+CGG 0.610204 3_4:+11511468 None:intergenic
GTTTGCATGCTCAATCCATG+GGG 0.610224 3_4:-11512193 Msa0490130:CDS
TCTGGCGAATCGGAAGCCGT+TGG 0.612003 3_4:-11511484 Msa0490130:CDS
TTGCATGCTCAATCCATGGG+GGG 0.612416 3_4:-11512191 Msa0490130:CDS
TGCTAAGAATGTTGGAAATG+TGG 0.613562 3_4:-11511112 Msa0490130:CDS
GATGTTCATGTTGATATGAG+TGG 0.616806 3_4:-11512488 Msa0490130:CDS
AGCCCAGGTCAAAGAGACAA+TGG 0.619161 3_4:-11512452 Msa0490130:CDS
TAATTTATACCGGTCAGGGT+GGG 0.620279 3_4:-11512064 Msa0490130:CDS
TTAGGAAAACACTGACATGT+GGG 0.620821 3_4:+11511447 None:intergenic
AAGGGATACAGGAAGACTCT+CGG 0.623134 3_4:+11511704 None:intergenic
TACGACGATGAAGCTGAGGA+TGG 0.627250 3_4:-11512095 Msa0490130:CDS
ACCGCTTCTTCTAGTAACTT+AGG 0.628944 3_4:+11511186 None:intergenic
AGGAAGACTCTCGGCTCCCG+AGG 0.629984 3_4:+11511713 None:intergenic
GCGGTCACCCTGGATATGCA+AGG 0.632039 3_4:+11512160 None:intergenic
ACAAACACAGCGAAGAGGGT+AGG 0.634440 3_4:-11512278 Msa0490130:CDS
CTACAGCTGCAACTATGTGA+AGG 0.634477 3_4:+11511594 None:intergenic
ATACTTGTCAATGGAACCCG+GGG 0.636158 3_4:+11512805 None:intergenic
ATTGATGCCTTGCATATCCA+GGG 0.637842 3_4:-11512167 Msa0490130:CDS
GTTAGGAAAACACTGACATG+TGG 0.639912 3_4:+11511446 None:intergenic
AGAATACGACGATGAAGCTG+AGG 0.645222 3_4:-11512099 Msa0490130:CDS
TTCGAACAAACACAGCGAAG+AGG 0.646517 3_4:-11512283 Msa0490130:CDS
TTTGCATGCTCAATCCATGG+GGG 0.646538 3_4:-11512192 Msa0490130:CDS
AGATGCCAAGGAATTGAACA+CGG 0.648462 3_4:-11512360 Msa0490130:CDS
GAGGGTAGCAGTGCACGCAA+AGG 0.654567 3_4:-11510934 Msa0490130:CDS
TATGGTTCCGATCACACCGA+GGG 0.656242 3_4:-11510952 Msa0490130:CDS
AGTACCTGGAGTTGAGATTG+GGG 0.657916 3_4:-11512252 Msa0490130:CDS
TTTGCAGTTGAAGTATCATG+AGG 0.660591 3_4:+11512665 None:intergenic
ATAATTTATACCGGTCAGGG+TGG 0.675305 3_4:-11512065 Msa0490130:CDS
GATGCCAAGGAATTGAACAC+GGG 0.677521 3_4:-11512359 Msa0490130:CDS
TGTGGATCATCAAACTGCCG+CGG 0.682422 3_4:-11510895 Msa0490130:CDS
GTTATCGACTTCATTGACAA+GGG 0.684235 3_4:+11511686 None:intergenic
ATGAGCAGTCCAAATCGCCA+GGG 0.685642 3_4:+11511553 None:intergenic
TAGGAAAACACTGACATGTG+GGG 0.688446 3_4:+11511448 None:intergenic
GCATATCCAGGGTGACCGCG+GGG 0.702296 3_4:-11512156 Msa0490130:CDS
AATGTCAAGTAAAAGAACCG+CGG 0.738828 3_4:+11510878 None:intergenic
AATGAAATAAGAGTCATCCG+AGG 0.740934 3_4:-11511957 Msa0490130:CDS
CAGCCAAAGTATCTTCCCCG+CGG 0.752822 3_4:+11512141 None:intergenic
TTATGGTTCCGATCACACCG+AGG 0.773964 3_4:-11510953 Msa0490130:CDS
TACTTGTCAATGGAACCCGG+GGG 0.840303 3_4:+11512806 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATAAAATTCAAGATTCA+TGG - chr3_4:11511837-11511856 Msa0490130:CDS 20.0%
!! GTATAAAATTCAAGATTCAT+GGG - chr3_4:11511838-11511857 Msa0490130:CDS 20.0%
!! ACTTGAAAGATTCATAAATA+CGG + chr3_4:11512504-11512523 None:intergenic 20.0%
!! TCTTAGCATTTATAATAAGA+GGG + chr3_4:11512597-11512616 None:intergenic 20.0%
!! TTCTTAGCATTTATAATAAG+AGG + chr3_4:11512598-11512617 None:intergenic 20.0%
!! ATTATAAATGCTAAGAATGT+TGG - chr3_4:11512601-11512620 Msa0490130:CDS 20.0%
!! TGTATAAAATTCAAGATTCA+TGG - chr3_4:11511837-11511856 Msa0490130:CDS 20.0%
!! GTATAAAATTCAAGATTCAT+GGG - chr3_4:11511838-11511857 Msa0490130:CDS 20.0%
!! ACTTGAAAGATTCATAAATA+CGG + chr3_4:11512504-11512523 None:intergenic 20.0%
!! TCTTAGCATTTATAATAAGA+GGG + chr3_4:11512597-11512616 None:intergenic 20.0%
!! TTCTTAGCATTTATAATAAG+AGG + chr3_4:11512598-11512617 None:intergenic 20.0%
!! ATTATAAATGCTAAGAATGT+TGG - chr3_4:11512601-11512620 Msa0490130:CDS 20.0%
!! AATATTGCCAGCTTTTAAAT+CGG + chr3_4:11511402-11511421 None:intergenic 25.0%
! GGTGATGTTATAATTTATAC+CGG - chr3_4:11511647-11511666 Msa0490130:CDS 25.0%
! TGCATTAAACTGAATGATTT+CGG + chr3_4:11512106-11512125 None:intergenic 25.0%
!! GATTTTCCGTATATTATCAA+TGG - chr3_4:11512211-11512230 Msa0490130:CDS 25.0%
!! AGAACTCCATTGATAATATA+CGG + chr3_4:11512220-11512239 None:intergenic 25.0%
! CTTGAAAGATTCATAAATAC+GGG + chr3_4:11512503-11512522 None:intergenic 25.0%
! GTATTTATGAATCTTTCAAG+TGG - chr3_4:11512503-11512522 Msa0490130:CDS 25.0%
! CATGAGTTAACATATGATTA+TGG - chr3_4:11512751-11512770 Msa0490130:CDS 25.0%
!! AATATTGCCAGCTTTTAAAT+CGG + chr3_4:11511402-11511421 None:intergenic 25.0%
! GGTGATGTTATAATTTATAC+CGG - chr3_4:11511647-11511666 Msa0490130:CDS 25.0%
! TGCATTAAACTGAATGATTT+CGG + chr3_4:11512106-11512125 None:intergenic 25.0%
!! GATTTTCCGTATATTATCAA+TGG - chr3_4:11512211-11512230 Msa0490130:CDS 25.0%
!! AGAACTCCATTGATAATATA+CGG + chr3_4:11512220-11512239 None:intergenic 25.0%
! CTTGAAAGATTCATAAATAC+GGG + chr3_4:11512503-11512522 None:intergenic 25.0%
! GTATTTATGAATCTTTCAAG+TGG - chr3_4:11512503-11512522 Msa0490130:CDS 25.0%
! CATGAGTTAACATATGATTA+TGG - chr3_4:11512751-11512770 Msa0490130:CDS 25.0%
CAGAATCTTATACTTGTCAA+TGG + chr3_4:11510928-11510947 None:intergenic 30.0%
CATTGACAAGTATAAGATTC+TGG - chr3_4:11510926-11510945 Msa0490130:CDS 30.0%
ACAGGTATCAAACTTCTTAT+AGG + chr3_4:11510960-11510979 None:intergenic 30.0%
!!! GTTTGATACCTGTTTTTTCA+AGG - chr3_4:11510967-11510986 Msa0490130:CDS 30.0%
!! TTTTCTCCATTTTTCCCATT+TGG - chr3_4:11511029-11511048 Msa0490130:CDS 30.0%
! TTTTAGCAACAAAAGAAGTG+CGG - chr3_4:11511160-11511179 Msa0490130:CDS 30.0%
GCACAATATTAACAACTTCA+CGG + chr3_4:11511298-11511317 None:intergenic 30.0%
TGTTATAATTTATACCGGTC+AGG - chr3_4:11511652-11511671 Msa0490130:CDS 30.0%
GTTATAATTTATACCGGTCA+GGG - chr3_4:11511653-11511672 Msa0490130:CDS 30.0%
GCAAAAATCTATGTCTATGA+TGG - chr3_4:11511812-11511831 Msa0490130:CDS 30.0%
AGAGTGGAAATATGTGAAAA+AGG + chr3_4:11512074-11512093 None:intergenic 30.0%
GTATATTATCAATGGAGTTC+TGG - chr3_4:11512219-11512238 Msa0490130:CDS 30.0%
!!! TTGTTTTGAACACTTCCATT+TGG + chr3_4:11512336-11512355 None:intergenic 30.0%
!! AATGGAAGTGTTCAAAACAA+AGG - chr3_4:11512336-11512355 Msa0490130:CDS 30.0%
GTGTTCAAAACAAAGGATAA+AGG - chr3_4:11512343-11512362 Msa0490130:CDS 30.0%
TCAAAACAAAGGATAAAGGT+TGG - chr3_4:11512347-11512366 Msa0490130:CDS 30.0%
CAAAACAAAGGATAAAGGTT+GGG - chr3_4:11512348-11512367 Msa0490130:CDS 30.0%
AAAACAAAGGATAAAGGTTG+GGG - chr3_4:11512349-11512368 Msa0490130:CDS 30.0%
TTAAATCAGCTTGTACAAGA+AGG - chr3_4:11512448-11512467 Msa0490130:CDS 30.0%
TTGTTCTCTTCATATAAGAC+AGG + chr3_4:11512679-11512698 None:intergenic 30.0%
AAAAAATGCAACATGGAGAA+AGG + chr3_4:11512707-11512726 None:intergenic 30.0%
TCAATGCAAAAAATGCAACA+TGG + chr3_4:11512714-11512733 None:intergenic 30.0%
TCATATGTTAACTCATGCAT+TGG + chr3_4:11512748-11512767 None:intergenic 30.0%
CAGAATCTTATACTTGTCAA+TGG + chr3_4:11510928-11510947 None:intergenic 30.0%
CATTGACAAGTATAAGATTC+TGG - chr3_4:11510926-11510945 Msa0490130:CDS 30.0%
ACAGGTATCAAACTTCTTAT+AGG + chr3_4:11510960-11510979 None:intergenic 30.0%
!!! GTTTGATACCTGTTTTTTCA+AGG - chr3_4:11510967-11510986 Msa0490130:CDS 30.0%
!! TTTTCTCCATTTTTCCCATT+TGG - chr3_4:11511029-11511048 Msa0490130:CDS 30.0%
! TTTTAGCAACAAAAGAAGTG+CGG - chr3_4:11511160-11511179 Msa0490130:CDS 30.0%
GCACAATATTAACAACTTCA+CGG + chr3_4:11511298-11511317 None:intergenic 30.0%
TGTTATAATTTATACCGGTC+AGG - chr3_4:11511652-11511671 Msa0490130:CDS 30.0%
GTTATAATTTATACCGGTCA+GGG - chr3_4:11511653-11511672 Msa0490130:CDS 30.0%
GCAAAAATCTATGTCTATGA+TGG - chr3_4:11511812-11511831 Msa0490130:CDS 30.0%
AGAGTGGAAATATGTGAAAA+AGG + chr3_4:11512074-11512093 None:intergenic 30.0%
GTATATTATCAATGGAGTTC+TGG - chr3_4:11512219-11512238 Msa0490130:CDS 30.0%
!!! TTGTTTTGAACACTTCCATT+TGG + chr3_4:11512336-11512355 None:intergenic 30.0%
!! AATGGAAGTGTTCAAAACAA+AGG - chr3_4:11512336-11512355 Msa0490130:CDS 30.0%
GTGTTCAAAACAAAGGATAA+AGG - chr3_4:11512343-11512362 Msa0490130:CDS 30.0%
TCAAAACAAAGGATAAAGGT+TGG - chr3_4:11512347-11512366 Msa0490130:CDS 30.0%
CAAAACAAAGGATAAAGGTT+GGG - chr3_4:11512348-11512367 Msa0490130:CDS 30.0%
AAAACAAAGGATAAAGGTTG+GGG - chr3_4:11512349-11512368 Msa0490130:CDS 30.0%
TTAAATCAGCTTGTACAAGA+AGG - chr3_4:11512448-11512467 Msa0490130:CDS 30.0%
TTGTTCTCTTCATATAAGAC+AGG + chr3_4:11512679-11512698 None:intergenic 30.0%
AAAAAATGCAACATGGAGAA+AGG + chr3_4:11512707-11512726 None:intergenic 30.0%
TCAATGCAAAAAATGCAACA+TGG + chr3_4:11512714-11512733 None:intergenic 30.0%
TCATATGTTAACTCATGCAT+TGG + chr3_4:11512748-11512767 None:intergenic 30.0%
TTATACTTGTCAATGGAACC+CGG + chr3_4:11510921-11510940 None:intergenic 35.0%
TGAGGATTCCTTGAAAAAAC+AGG + chr3_4:11510978-11510997 None:intergenic 35.0%
!!! GTTTTTTCAAGGAATCCTCA+AGG - chr3_4:11510978-11510997 Msa0490130:CDS 35.0%
AAAAATGGAGAAAACCCAGA+AGG + chr3_4:11511023-11511042 None:intergenic 35.0%
! TTTGCAGTTGAAGTATCATG+AGG + chr3_4:11511059-11511078 None:intergenic 35.0%
GATGTTCATGTTGATATGAG+TGG - chr3_4:11511233-11511252 Msa0490130:CDS 35.0%
GTTGATATGAGTGGTTTAGT+TGG - chr3_4:11511242-11511261 Msa0490130:CDS 35.0%
!! AAACGTACCGATTTAAAAGC+TGG - chr3_4:11511392-11511411 Msa0490130:CDS 35.0%
GGCAATATTTGTATGACCAA+AGG - chr3_4:11511413-11511432 Msa0490130:CDS 35.0%
TGTGTTTGTTCGAATTCCTT+TGG + chr3_4:11511432-11511451 None:intergenic 35.0%
! GGACATTTTCTTTTTCCGAA+TGG - chr3_4:11511490-11511509 Msa0490130:CDS 35.0%
CGATAACACACATTTCCATT+CGG + chr3_4:11511508-11511527 None:intergenic 35.0%
CGAATGGAAATGTGTGTTAT+CGG - chr3_4:11511506-11511525 Msa0490130:CDS 35.0%
TCAGATCAGAAGCTTCATAA+GGG - chr3_4:11511707-11511726 Msa0490130:CDS 35.0%
TCATAAGGGTAATCTTGCTT+TGG - chr3_4:11511721-11511740 Msa0490130:CDS 35.0%
AATGAAATAAGAGTCATCCG+AGG - chr3_4:11511764-11511783 Msa0490130:CDS 35.0%
! TAGACATAGATTTTTGCACC+TGG + chr3_4:11511809-11511828 None:intergenic 35.0%
! TCATGGGTTGAAAAAGCAAA+AGG - chr3_4:11511854-11511873 Msa0490130:CDS 35.0%
!! TATAAGTTGATAAGAGTGCC+TGG - chr3_4:11511896-11511915 Msa0490130:CDS 35.0%
CTTCTGAACAGATTTCCAAA+CGG + chr3_4:11511939-11511958 None:intergenic 35.0%
TTTGGAAATCTGTTCAGAAG+TGG - chr3_4:11511939-11511958 Msa0490130:CDS 35.0%
!! GTTATCGACTTCATTGACAA+GGG + chr3_4:11512038-11512057 None:intergenic 35.0%
TGGAAATATGTGAAAAAGGC+AGG + chr3_4:11512070-11512089 None:intergenic 35.0%
TTAGGAAAACACTGACATGT+GGG + chr3_4:11512277-11512296 None:intergenic 35.0%
! GATACTCGATTTTTGCAGTT+AGG + chr3_4:11512295-11512314 None:intergenic 35.0%
AAAAATCGAGTATCCCAAAC+CGG - chr3_4:11512301-11512320 Msa0490130:CDS 35.0%
GAGAAGTTATCGATAAAGCT+AGG - chr3_4:11512425-11512444 Msa0490130:CDS 35.0%
GCATTTATAATAAGAGGGTG+TGG + chr3_4:11512592-11512611 None:intergenic 35.0%
TGCTAAGAATGTTGGAAATG+TGG - chr3_4:11512609-11512628 Msa0490130:CDS 35.0%
! ATGTTAACTCATGCATTGGT+GGG + chr3_4:11512744-11512763 None:intergenic 35.0%
TATGTTAACTCATGCATTGG+TGG + chr3_4:11512745-11512764 None:intergenic 35.0%
GGTAGAAAGAAATGCTTATG+TGG - chr3_4:11512808-11512827 Msa0490130:CDS 35.0%
TTATACTTGTCAATGGAACC+CGG + chr3_4:11510921-11510940 None:intergenic 35.0%
TGAGGATTCCTTGAAAAAAC+AGG + chr3_4:11510978-11510997 None:intergenic 35.0%
!!! GTTTTTTCAAGGAATCCTCA+AGG - chr3_4:11510978-11510997 Msa0490130:CDS 35.0%
AAAAATGGAGAAAACCCAGA+AGG + chr3_4:11511023-11511042 None:intergenic 35.0%
! TTTGCAGTTGAAGTATCATG+AGG + chr3_4:11511059-11511078 None:intergenic 35.0%
GATGTTCATGTTGATATGAG+TGG - chr3_4:11511233-11511252 Msa0490130:CDS 35.0%
GTTGATATGAGTGGTTTAGT+TGG - chr3_4:11511242-11511261 Msa0490130:CDS 35.0%
!! AAACGTACCGATTTAAAAGC+TGG - chr3_4:11511392-11511411 Msa0490130:CDS 35.0%
GGCAATATTTGTATGACCAA+AGG - chr3_4:11511413-11511432 Msa0490130:CDS 35.0%
TGTGTTTGTTCGAATTCCTT+TGG + chr3_4:11511432-11511451 None:intergenic 35.0%
! GGACATTTTCTTTTTCCGAA+TGG - chr3_4:11511490-11511509 Msa0490130:CDS 35.0%
CGATAACACACATTTCCATT+CGG + chr3_4:11511508-11511527 None:intergenic 35.0%
CGAATGGAAATGTGTGTTAT+CGG - chr3_4:11511506-11511525 Msa0490130:CDS 35.0%
TCAGATCAGAAGCTTCATAA+GGG - chr3_4:11511707-11511726 Msa0490130:CDS 35.0%
TCATAAGGGTAATCTTGCTT+TGG - chr3_4:11511721-11511740 Msa0490130:CDS 35.0%
AATGAAATAAGAGTCATCCG+AGG - chr3_4:11511764-11511783 Msa0490130:CDS 35.0%
! TAGACATAGATTTTTGCACC+TGG + chr3_4:11511809-11511828 None:intergenic 35.0%
! TCATGGGTTGAAAAAGCAAA+AGG - chr3_4:11511854-11511873 Msa0490130:CDS 35.0%
!! TATAAGTTGATAAGAGTGCC+TGG - chr3_4:11511896-11511915 Msa0490130:CDS 35.0%
CTTCTGAACAGATTTCCAAA+CGG + chr3_4:11511939-11511958 None:intergenic 35.0%
TTTGGAAATCTGTTCAGAAG+TGG - chr3_4:11511939-11511958 Msa0490130:CDS 35.0%
!! GTTATCGACTTCATTGACAA+GGG + chr3_4:11512038-11512057 None:intergenic 35.0%
TGGAAATATGTGAAAAAGGC+AGG + chr3_4:11512070-11512089 None:intergenic 35.0%
TTAGGAAAACACTGACATGT+GGG + chr3_4:11512277-11512296 None:intergenic 35.0%
! GATACTCGATTTTTGCAGTT+AGG + chr3_4:11512295-11512314 None:intergenic 35.0%
AAAAATCGAGTATCCCAAAC+CGG - chr3_4:11512301-11512320 Msa0490130:CDS 35.0%
GAGAAGTTATCGATAAAGCT+AGG - chr3_4:11512425-11512444 Msa0490130:CDS 35.0%
GCATTTATAATAAGAGGGTG+TGG + chr3_4:11512592-11512611 None:intergenic 35.0%
TGCTAAGAATGTTGGAAATG+TGG - chr3_4:11512609-11512628 Msa0490130:CDS 35.0%
! ATGTTAACTCATGCATTGGT+GGG + chr3_4:11512744-11512763 None:intergenic 35.0%
TATGTTAACTCATGCATTGG+TGG + chr3_4:11512745-11512764 None:intergenic 35.0%
GGTAGAAAGAAATGCTTATG+TGG - chr3_4:11512808-11512827 Msa0490130:CDS 35.0%
TATACTTGTCAATGGAACCC+GGG + chr3_4:11510920-11510939 None:intergenic 40.0%
AATCCTCAAGGTCAATCTTC+AGG - chr3_4:11510990-11511009 Msa0490130:CDS 40.0%
!! TCTCCATTTTTCCCATTTGG+TGG - chr3_4:11511032-11511051 Msa0490130:CDS 40.0%
TATCATGAGGTCCACCAAAT+GGG + chr3_4:11511046-11511065 None:intergenic 40.0%
CTAAATGCTTGAAGTGGAGT+CGG + chr3_4:11511098-11511117 None:intergenic 40.0%
GAGGATCTCAATGACAATGA+TGG - chr3_4:11511137-11511156 Msa0490130:CDS 40.0%
TATGCTTCTTCAATCTGACC+CGG + chr3_4:11511202-11511221 None:intergenic 40.0%
! GGTCAGATTGAAGAAGCATA+AGG - chr3_4:11511202-11511221 Msa0490130:CDS 40.0%
TACCATTGTCTCTTTGACCT+GGG + chr3_4:11511274-11511293 None:intergenic 40.0%
TTACCATTGTCTCTTTGACC+TGG + chr3_4:11511275-11511294 None:intergenic 40.0%
CATTTGATGCGCTAAGAAGA+AGG - chr3_4:11511324-11511343 Msa0490130:CDS 40.0%
ATCTCAACTTGTAGATGCCA+AGG - chr3_4:11511349-11511368 Msa0490130:CDS 40.0%
AGATGCCAAGGAATTGAACA+CGG - chr3_4:11511361-11511380 Msa0490130:CDS 40.0%
ATTGATGCCTTGCATATCCA+GGG - chr3_4:11511554-11511573 Msa0490130:CDS 40.0%
ATAATTTATACCGGTCAGGG+TGG - chr3_4:11511656-11511675 Msa0490130:CDS 40.0%
TAATTTATACCGGTCAGGGT+GGG - chr3_4:11511657-11511676 Msa0490130:CDS 40.0%
GTCAGATCAGAAGCTTCATA+AGG - chr3_4:11511706-11511725 Msa0490130:CDS 40.0%
! TGGGTTGAAAAAGCAAAAGG+AGG - chr3_4:11511857-11511876 Msa0490130:CDS 40.0%
GTTGAAAAAGCAAAAGGAGG+TGG - chr3_4:11511860-11511879 Msa0490130:CDS 40.0%
AACAGATTTCCAAACGGCAA+AGG + chr3_4:11511933-11511952 None:intergenic 40.0%
ACTTCATTGACAAGGGATAC+AGG + chr3_4:11512031-11512050 None:intergenic 40.0%
!! CGTTATCGACTTCATTGACA+AGG + chr3_4:11512039-11512058 None:intergenic 40.0%
ATTTCGGATGTCTAAGAGAG+TGG + chr3_4:11512090-11512109 None:intergenic 40.0%
ATTTGGACTGCTCATGCATT+CGG - chr3_4:11512176-11512195 Msa0490130:CDS 40.0%
TCATGCATTCGGAGAAATGA+AGG - chr3_4:11512187-11512206 Msa0490130:CDS 40.0%
TAGGAAAACACTGACATGTG+GGG + chr3_4:11512276-11512295 None:intergenic 40.0%
GTTAGGAAAACACTGACATG+TGG + chr3_4:11512278-11512297 None:intergenic 40.0%
!! TTCCATTTGGTGCTTCAAAC+CGG + chr3_4:11512323-11512342 None:intergenic 40.0%
!! ATAAAAGCACCAGCACGAAT+AGG + chr3_4:11512391-11512410 None:intergenic 40.0%
!! GCTTTTATTTGCGAGTATGC+AGG - chr3_4:11512403-11512422 Msa0490130:CDS 40.0%
GCCTAAGTTACTAGAAGAAG+CGG - chr3_4:11512534-11512553 Msa0490130:CDS 40.0%
ACCGCTTCTTCTAGTAACTT+AGG + chr3_4:11512538-11512557 None:intergenic 40.0%
GGTCACAAATGAGTCTAATG+AGG - chr3_4:11512555-11512574 Msa0490130:CDS 40.0%
! GTTGCTCTCCAAATGTTTTC+TGG - chr3_4:11512650-11512669 Msa0490130:CDS 40.0%
ATGCAACATGGAGAAAGGAT+TGG + chr3_4:11512702-11512721 None:intergenic 40.0%
TATACTTGTCAATGGAACCC+GGG + chr3_4:11510920-11510939 None:intergenic 40.0%
AATCCTCAAGGTCAATCTTC+AGG - chr3_4:11510990-11511009 Msa0490130:CDS 40.0%
!! TCTCCATTTTTCCCATTTGG+TGG - chr3_4:11511032-11511051 Msa0490130:CDS 40.0%
TATCATGAGGTCCACCAAAT+GGG + chr3_4:11511046-11511065 None:intergenic 40.0%
CTAAATGCTTGAAGTGGAGT+CGG + chr3_4:11511098-11511117 None:intergenic 40.0%
GAGGATCTCAATGACAATGA+TGG - chr3_4:11511137-11511156 Msa0490130:CDS 40.0%
TATGCTTCTTCAATCTGACC+CGG + chr3_4:11511202-11511221 None:intergenic 40.0%
! GGTCAGATTGAAGAAGCATA+AGG - chr3_4:11511202-11511221 Msa0490130:CDS 40.0%
TACCATTGTCTCTTTGACCT+GGG + chr3_4:11511274-11511293 None:intergenic 40.0%
TTACCATTGTCTCTTTGACC+TGG + chr3_4:11511275-11511294 None:intergenic 40.0%
CATTTGATGCGCTAAGAAGA+AGG - chr3_4:11511324-11511343 Msa0490130:CDS 40.0%
ATCTCAACTTGTAGATGCCA+AGG - chr3_4:11511349-11511368 Msa0490130:CDS 40.0%
AGATGCCAAGGAATTGAACA+CGG - chr3_4:11511361-11511380 Msa0490130:CDS 40.0%
ATTGATGCCTTGCATATCCA+GGG - chr3_4:11511554-11511573 Msa0490130:CDS 40.0%
ATAATTTATACCGGTCAGGG+TGG - chr3_4:11511656-11511675 Msa0490130:CDS 40.0%
TAATTTATACCGGTCAGGGT+GGG - chr3_4:11511657-11511676 Msa0490130:CDS 40.0%
GTCAGATCAGAAGCTTCATA+AGG - chr3_4:11511706-11511725 Msa0490130:CDS 40.0%
! TGGGTTGAAAAAGCAAAAGG+AGG - chr3_4:11511857-11511876 Msa0490130:CDS 40.0%
GTTGAAAAAGCAAAAGGAGG+TGG - chr3_4:11511860-11511879 Msa0490130:CDS 40.0%
AACAGATTTCCAAACGGCAA+AGG + chr3_4:11511933-11511952 None:intergenic 40.0%
ACTTCATTGACAAGGGATAC+AGG + chr3_4:11512031-11512050 None:intergenic 40.0%
!! CGTTATCGACTTCATTGACA+AGG + chr3_4:11512039-11512058 None:intergenic 40.0%
ATTTCGGATGTCTAAGAGAG+TGG + chr3_4:11512090-11512109 None:intergenic 40.0%
ATTTGGACTGCTCATGCATT+CGG - chr3_4:11512176-11512195 Msa0490130:CDS 40.0%
TCATGCATTCGGAGAAATGA+AGG - chr3_4:11512187-11512206 Msa0490130:CDS 40.0%
TAGGAAAACACTGACATGTG+GGG + chr3_4:11512276-11512295 None:intergenic 40.0%
GTTAGGAAAACACTGACATG+TGG + chr3_4:11512278-11512297 None:intergenic 40.0%
!! TTCCATTTGGTGCTTCAAAC+CGG + chr3_4:11512323-11512342 None:intergenic 40.0%
!! ATAAAAGCACCAGCACGAAT+AGG + chr3_4:11512391-11512410 None:intergenic 40.0%
!! GCTTTTATTTGCGAGTATGC+AGG - chr3_4:11512403-11512422 Msa0490130:CDS 40.0%
GCCTAAGTTACTAGAAGAAG+CGG - chr3_4:11512534-11512553 Msa0490130:CDS 40.0%
ACCGCTTCTTCTAGTAACTT+AGG + chr3_4:11512538-11512557 None:intergenic 40.0%
GGTCACAAATGAGTCTAATG+AGG - chr3_4:11512555-11512574 Msa0490130:CDS 40.0%
! GTTGCTCTCCAAATGTTTTC+TGG - chr3_4:11512650-11512669 Msa0490130:CDS 40.0%
ATGCAACATGGAGAAAGGAT+TGG + chr3_4:11512702-11512721 None:intergenic 40.0%
ATACTTGTCAATGGAACCCG+GGG + chr3_4:11510919-11510938 None:intergenic 45.0%
TGACCTGAAGATTGACCTTG+AGG + chr3_4:11510996-11511015 None:intergenic 45.0%
TCTTCAGGTCAGTATCCTTC+TGG - chr3_4:11511005-11511024 Msa0490130:CDS 45.0%
CTTCAGGTCAGTATCCTTCT+GGG - chr3_4:11511006-11511025 Msa0490130:CDS 45.0%
GGTCCACCAAATGGGAAAAA+TGG + chr3_4:11511038-11511057 None:intergenic 45.0%
GTATCATGAGGTCCACCAAA+TGG + chr3_4:11511047-11511066 None:intergenic 45.0%
CGACTCCACTTCAAGCATTT+AGG - chr3_4:11511096-11511115 Msa0490130:CDS 45.0%
! CAAGCATTTAGGAGCCCTTT+TGG - chr3_4:11511107-11511126 Msa0490130:CDS 45.0%
!! ATTTAGGAGCCCTTTTGGAG+AGG - chr3_4:11511112-11511131 Msa0490130:CDS 45.0%
GATCCTCATCCTCTCCAAAA+GGG + chr3_4:11511124-11511143 None:intergenic 45.0%
AGATCCTCATCCTCTCCAAA+AGG + chr3_4:11511125-11511144 None:intergenic 45.0%
! GGTTTAGTTGGTATAAGCCC+AGG - chr3_4:11511254-11511273 Msa0490130:CDS 45.0%
GATGCCAAGGAATTGAACAC+GGG - chr3_4:11511362-11511381 Msa0490130:CDS 45.0%
TTCGAACAAACACAGCGAAG+AGG - chr3_4:11511438-11511457 Msa0490130:CDS 45.0%
TCGAACAAACACAGCGAAGA+GGG - chr3_4:11511439-11511458 Msa0490130:CDS 45.0%
TCAGTACCTGGAGTTGAGAT+TGG - chr3_4:11511467-11511486 Msa0490130:CDS 45.0%
CAGTACCTGGAGTTGAGATT+GGG - chr3_4:11511468-11511487 Msa0490130:CDS 45.0%
AGTACCTGGAGTTGAGATTG+GGG - chr3_4:11511469-11511488 Msa0490130:CDS 45.0%
GGTTTGCATGCTCAATCCAT+GGG - chr3_4:11511527-11511546 Msa0490130:CDS 45.0%
GTTTGCATGCTCAATCCATG+GGG - chr3_4:11511528-11511547 Msa0490130:CDS 45.0%
TTTGCATGCTCAATCCATGG+GGG - chr3_4:11511529-11511548 Msa0490130:CDS 45.0%
GATTGATGCCTTGCATATCC+AGG - chr3_4:11511553-11511572 Msa0490130:CDS 45.0%
GCTGTTAGCATTGTTTCGTC+AGG - chr3_4:11511599-11511618 Msa0490130:CDS 45.0%
AGAATACGACGATGAAGCTG+AGG - chr3_4:11511622-11511641 Msa0490130:CDS 45.0%
TCACAGCATCTTTGATGCCT+CGG + chr3_4:11511784-11511803 None:intergenic 45.0%
ATCAAAGATGCTGTGACTCC+AGG - chr3_4:11511788-11511807 Msa0490130:CDS 45.0%
GAAAAAGCAAAAGGAGGTGG+TGG - chr3_4:11511863-11511882 Msa0490130:CDS 45.0%
TCTGTTCAGAAGTGGAAAGC+TGG - chr3_4:11511947-11511966 Msa0490130:CDS 45.0%
GAATAAGTCCAGTCCTTGCA+GGG + chr3_4:11511976-11511995 None:intergenic 45.0%
AGAATAAGTCCAGTCCTTGC+AGG + chr3_4:11511977-11511996 None:intergenic 45.0%
TATTCTTGCTGACCTCTCCT+CGG - chr3_4:11511991-11512010 Msa0490130:CDS 45.0%
AAGGGATACAGGAAGACTCT+CGG + chr3_4:11512020-11512039 None:intergenic 45.0%
CTACAGCTGCAACTATGTGA+AGG + chr3_4:11512130-11512149 None:intergenic 45.0%
TCACATAGTTGCAGCTGTAG+TGG - chr3_4:11512130-11512149 Msa0490130:CDS 45.0%
! GGTAAAAAAGCATGTGTCCC+TGG - chr3_4:11512151-11512170 Msa0490130:CDS 45.0%
! TCAATGGAGTTCTGGCGAAT+CGG - chr3_4:11512227-11512246 Msa0490130:CDS 45.0%
!! AAGCCGTTGGTTCATGAATG+TGG - chr3_4:11512250-11512269 Msa0490130:CDS 45.0%
! TTGGTGCTTCAAACCGGTTT+GGG + chr3_4:11512317-11512336 None:intergenic 45.0%
!! TTTGGTGCTTCAAACCGGTT+TGG + chr3_4:11512318-11512337 None:intergenic 45.0%
!! AACCGGTTTGAAGCACCAAA+TGG - chr3_4:11512318-11512337 Msa0490130:CDS 45.0%
AGGATAAAGGTTGGGGTCTT+CGG - chr3_4:11512356-11512375 Msa0490130:CDS 45.0%
ACAGGCTGCCAGAAAACATT+TGG + chr3_4:11512661-11512680 None:intergenic 45.0%
ATACTTGTCAATGGAACCCG+GGG + chr3_4:11510919-11510938 None:intergenic 45.0%
TGACCTGAAGATTGACCTTG+AGG + chr3_4:11510996-11511015 None:intergenic 45.0%
TCTTCAGGTCAGTATCCTTC+TGG - chr3_4:11511005-11511024 Msa0490130:CDS 45.0%
CTTCAGGTCAGTATCCTTCT+GGG - chr3_4:11511006-11511025 Msa0490130:CDS 45.0%
GGTCCACCAAATGGGAAAAA+TGG + chr3_4:11511038-11511057 None:intergenic 45.0%
GTATCATGAGGTCCACCAAA+TGG + chr3_4:11511047-11511066 None:intergenic 45.0%
CGACTCCACTTCAAGCATTT+AGG - chr3_4:11511096-11511115 Msa0490130:CDS 45.0%
! CAAGCATTTAGGAGCCCTTT+TGG - chr3_4:11511107-11511126 Msa0490130:CDS 45.0%
!! ATTTAGGAGCCCTTTTGGAG+AGG - chr3_4:11511112-11511131 Msa0490130:CDS 45.0%
GATCCTCATCCTCTCCAAAA+GGG + chr3_4:11511124-11511143 None:intergenic 45.0%
AGATCCTCATCCTCTCCAAA+AGG + chr3_4:11511125-11511144 None:intergenic 45.0%
! GGTTTAGTTGGTATAAGCCC+AGG - chr3_4:11511254-11511273 Msa0490130:CDS 45.0%
GATGCCAAGGAATTGAACAC+GGG - chr3_4:11511362-11511381 Msa0490130:CDS 45.0%
TTCGAACAAACACAGCGAAG+AGG - chr3_4:11511438-11511457 Msa0490130:CDS 45.0%
TCGAACAAACACAGCGAAGA+GGG - chr3_4:11511439-11511458 Msa0490130:CDS 45.0%
TCAGTACCTGGAGTTGAGAT+TGG - chr3_4:11511467-11511486 Msa0490130:CDS 45.0%
CAGTACCTGGAGTTGAGATT+GGG - chr3_4:11511468-11511487 Msa0490130:CDS 45.0%
AGTACCTGGAGTTGAGATTG+GGG - chr3_4:11511469-11511488 Msa0490130:CDS 45.0%
GGTTTGCATGCTCAATCCAT+GGG - chr3_4:11511527-11511546 Msa0490130:CDS 45.0%
GTTTGCATGCTCAATCCATG+GGG - chr3_4:11511528-11511547 Msa0490130:CDS 45.0%
TTTGCATGCTCAATCCATGG+GGG - chr3_4:11511529-11511548 Msa0490130:CDS 45.0%
GATTGATGCCTTGCATATCC+AGG - chr3_4:11511553-11511572 Msa0490130:CDS 45.0%
GCTGTTAGCATTGTTTCGTC+AGG - chr3_4:11511599-11511618 Msa0490130:CDS 45.0%
AGAATACGACGATGAAGCTG+AGG - chr3_4:11511622-11511641 Msa0490130:CDS 45.0%
TCACAGCATCTTTGATGCCT+CGG + chr3_4:11511784-11511803 None:intergenic 45.0%
ATCAAAGATGCTGTGACTCC+AGG - chr3_4:11511788-11511807 Msa0490130:CDS 45.0%
GAAAAAGCAAAAGGAGGTGG+TGG - chr3_4:11511863-11511882 Msa0490130:CDS 45.0%
TCTGTTCAGAAGTGGAAAGC+TGG - chr3_4:11511947-11511966 Msa0490130:CDS 45.0%
GAATAAGTCCAGTCCTTGCA+GGG + chr3_4:11511976-11511995 None:intergenic 45.0%
AGAATAAGTCCAGTCCTTGC+AGG + chr3_4:11511977-11511996 None:intergenic 45.0%
TATTCTTGCTGACCTCTCCT+CGG - chr3_4:11511991-11512010 Msa0490130:CDS 45.0%
AAGGGATACAGGAAGACTCT+CGG + chr3_4:11512020-11512039 None:intergenic 45.0%
CTACAGCTGCAACTATGTGA+AGG + chr3_4:11512130-11512149 None:intergenic 45.0%
TCACATAGTTGCAGCTGTAG+TGG - chr3_4:11512130-11512149 Msa0490130:CDS 45.0%
! GGTAAAAAAGCATGTGTCCC+TGG - chr3_4:11512151-11512170 Msa0490130:CDS 45.0%
! TCAATGGAGTTCTGGCGAAT+CGG - chr3_4:11512227-11512246 Msa0490130:CDS 45.0%
!! AAGCCGTTGGTTCATGAATG+TGG - chr3_4:11512250-11512269 Msa0490130:CDS 45.0%
! TTGGTGCTTCAAACCGGTTT+GGG + chr3_4:11512317-11512336 None:intergenic 45.0%
!! TTTGGTGCTTCAAACCGGTT+TGG + chr3_4:11512318-11512337 None:intergenic 45.0%
!! AACCGGTTTGAAGCACCAAA+TGG - chr3_4:11512318-11512337 Msa0490130:CDS 45.0%
AGGATAAAGGTTGGGGTCTT+CGG - chr3_4:11512356-11512375 Msa0490130:CDS 45.0%
ACAGGCTGCCAGAAAACATT+TGG + chr3_4:11512661-11512680 None:intergenic 45.0%
TACTTGTCAATGGAACCCGG+GGG + chr3_4:11510918-11510937 None:intergenic 50.0%
GGGCTCCTAAATGCTTGAAG+TGG + chr3_4:11511104-11511123 None:intergenic 50.0%
AGCCCAGGTCAAAGAGACAA+TGG - chr3_4:11511269-11511288 Msa0490130:CDS 50.0%
CGAACCCGTGTTCAATTCCT+TGG + chr3_4:11511369-11511388 None:intergenic 50.0%
ACAAACACAGCGAAGAGGGT+AGG - chr3_4:11511443-11511462 Msa0490130:CDS 50.0%
AAGAGGGTAGGATCAGTACC+TGG - chr3_4:11511455-11511474 Msa0490130:CDS 50.0%
ATGTCCCCAATCTCAACTCC+AGG + chr3_4:11511476-11511495 None:intergenic 50.0%
CGGTTTGCATGCTCAATCCA+TGG - chr3_4:11511526-11511545 Msa0490130:CDS 50.0%
TTGCATGCTCAATCCATGGG+GGG - chr3_4:11511530-11511549 Msa0490130:CDS 50.0%
TACGACGATGAAGCTGAGGA+TGG - chr3_4:11511626-11511645 Msa0490130:CDS 50.0%
GTTGAAATTCCCACCCTGAC+CGG + chr3_4:11511669-11511688 None:intergenic 50.0%
AACCTAGTGCCTTTGCCGTT+TGG - chr3_4:11511921-11511940 Msa0490130:CDS 50.0%
!! TTCCAAACGGCAAAGGCACT+AGG + chr3_4:11511926-11511945 None:intergenic 50.0%
ATTCTTGCTGACCTCTCCTC+GGG - chr3_4:11511992-11512011 Msa0490130:CDS 50.0%
ATGAGCAGTCCAAATCGCCA+GGG + chr3_4:11512171-11512190 None:intergenic 50.0%
GGGCCACATTCATGAACCAA+CGG + chr3_4:11512256-11512275 None:intergenic 50.0%
TCATGGGATCCTATTCGTGC+TGG - chr3_4:11512379-11512398 Msa0490130:CDS 50.0%
TTATGGTTCCGATCACACCG+AGG - chr3_4:11512768-11512787 Msa0490130:CDS 50.0%
TATGGTTCCGATCACACCGA+GGG - chr3_4:11512769-11512788 Msa0490130:CDS 50.0%
TGTGGATCATCAAACTGCCG+CGG - chr3_4:11512826-11512845 Msa0490130:CDS 50.0%
TACTTGTCAATGGAACCCGG+GGG + chr3_4:11510918-11510937 None:intergenic 50.0%
GGGCTCCTAAATGCTTGAAG+TGG + chr3_4:11511104-11511123 None:intergenic 50.0%
AGCCCAGGTCAAAGAGACAA+TGG - chr3_4:11511269-11511288 Msa0490130:CDS 50.0%
CGAACCCGTGTTCAATTCCT+TGG + chr3_4:11511369-11511388 None:intergenic 50.0%
ACAAACACAGCGAAGAGGGT+AGG - chr3_4:11511443-11511462 Msa0490130:CDS 50.0%
AAGAGGGTAGGATCAGTACC+TGG - chr3_4:11511455-11511474 Msa0490130:CDS 50.0%
ATGTCCCCAATCTCAACTCC+AGG + chr3_4:11511476-11511495 None:intergenic 50.0%
CGGTTTGCATGCTCAATCCA+TGG - chr3_4:11511526-11511545 Msa0490130:CDS 50.0%
TTGCATGCTCAATCCATGGG+GGG - chr3_4:11511530-11511549 Msa0490130:CDS 50.0%
TACGACGATGAAGCTGAGGA+TGG - chr3_4:11511626-11511645 Msa0490130:CDS 50.0%
GTTGAAATTCCCACCCTGAC+CGG + chr3_4:11511669-11511688 None:intergenic 50.0%
AACCTAGTGCCTTTGCCGTT+TGG - chr3_4:11511921-11511940 Msa0490130:CDS 50.0%
!! TTCCAAACGGCAAAGGCACT+AGG + chr3_4:11511926-11511945 None:intergenic 50.0%
ATTCTTGCTGACCTCTCCTC+GGG - chr3_4:11511992-11512011 Msa0490130:CDS 50.0%
ATGAGCAGTCCAAATCGCCA+GGG + chr3_4:11512171-11512190 None:intergenic 50.0%
GGGCCACATTCATGAACCAA+CGG + chr3_4:11512256-11512275 None:intergenic 50.0%
TCATGGGATCCTATTCGTGC+TGG - chr3_4:11512379-11512398 Msa0490130:CDS 50.0%
TTATGGTTCCGATCACACCG+AGG - chr3_4:11512768-11512787 Msa0490130:CDS 50.0%
TATGGTTCCGATCACACCGA+GGG - chr3_4:11512769-11512788 Msa0490130:CDS 50.0%
TGTGGATCATCAAACTGCCG+CGG - chr3_4:11512826-11512845 Msa0490130:CDS 50.0%
TCAACACTCAGTTCCTCCCC+CGG - chr3_4:11510899-11510918 Msa0490130:CDS 55.0%
GGAGTCGGCATCACTCTACT+TGG + chr3_4:11511083-11511102 None:intergenic 55.0%
!! GAGCCCTTTTGGAGAGGATG+AGG - chr3_4:11511118-11511137 Msa0490130:CDS 55.0%
CGGCAGCATCACATTCAAGC+CGG - chr3_4:11511180-11511199 Msa0490130:CDS 55.0%
GGCAGCATCACATTCAAGCC+GGG - chr3_4:11511181-11511200 Msa0490130:CDS 55.0%
TGCATGCTCAATCCATGGGG+GGG - chr3_4:11511531-11511550 Msa0490130:CDS 55.0%
TTGCATATCCAGGGTGACCG+CGG - chr3_4:11511563-11511582 Msa0490130:CDS 55.0%
TGACCGCGGGGAAGATACTT+TGG - chr3_4:11511577-11511596 Msa0490130:CDS 55.0%
! CAGCCAAAGTATCTTCCCCG+CGG + chr3_4:11511583-11511602 None:intergenic 55.0%
!! GCAAAGGCACTAGGTTGTCC+AGG + chr3_4:11511917-11511936 None:intergenic 55.0%
! GGAAAGCTGGTTTCCCTGCA+AGG - chr3_4:11511960-11511979 Msa0490130:CDS 55.0%
AGCATGTGTCCCTGGCGATT+TGG - chr3_4:11512159-11512178 Msa0490130:CDS 55.0%
CATGAGCAGTCCAAATCGCC+AGG + chr3_4:11512172-11512191 None:intergenic 55.0%
AAGGTTGGGGTCTTCGGTCA+TGG - chr3_4:11512362-11512381 Msa0490130:CDS 55.0%
AGGTTGGGGTCTTCGGTCAT+GGG - chr3_4:11512363-11512382 Msa0490130:CDS 55.0%
! ACTGCTACCCTCGGTGTGAT+CGG + chr3_4:11512779-11512798 None:intergenic 55.0%
TTTGCGTGCACTGCTACCCT+CGG + chr3_4:11512788-11512807 None:intergenic 55.0%
TCAACACTCAGTTCCTCCCC+CGG - chr3_4:11510899-11510918 Msa0490130:CDS 55.0%
GGAGTCGGCATCACTCTACT+TGG + chr3_4:11511083-11511102 None:intergenic 55.0%
!! GAGCCCTTTTGGAGAGGATG+AGG - chr3_4:11511118-11511137 Msa0490130:CDS 55.0%
CGGCAGCATCACATTCAAGC+CGG - chr3_4:11511180-11511199 Msa0490130:CDS 55.0%
GGCAGCATCACATTCAAGCC+GGG - chr3_4:11511181-11511200 Msa0490130:CDS 55.0%
TGCATGCTCAATCCATGGGG+GGG - chr3_4:11511531-11511550 Msa0490130:CDS 55.0%
TTGCATATCCAGGGTGACCG+CGG - chr3_4:11511563-11511582 Msa0490130:CDS 55.0%
TGACCGCGGGGAAGATACTT+TGG - chr3_4:11511577-11511596 Msa0490130:CDS 55.0%
! CAGCCAAAGTATCTTCCCCG+CGG + chr3_4:11511583-11511602 None:intergenic 55.0%
!! GCAAAGGCACTAGGTTGTCC+AGG + chr3_4:11511917-11511936 None:intergenic 55.0%
! GGAAAGCTGGTTTCCCTGCA+AGG - chr3_4:11511960-11511979 Msa0490130:CDS 55.0%
AGCATGTGTCCCTGGCGATT+TGG - chr3_4:11512159-11512178 Msa0490130:CDS 55.0%
CATGAGCAGTCCAAATCGCC+AGG + chr3_4:11512172-11512191 None:intergenic 55.0%
AAGGTTGGGGTCTTCGGTCA+TGG - chr3_4:11512362-11512381 Msa0490130:CDS 55.0%
AGGTTGGGGTCTTCGGTCAT+GGG - chr3_4:11512363-11512382 Msa0490130:CDS 55.0%
! ACTGCTACCCTCGGTGTGAT+CGG + chr3_4:11512779-11512798 None:intergenic 55.0%
TTTGCGTGCACTGCTACCCT+CGG + chr3_4:11512788-11512807 None:intergenic 55.0%
CAACACTCAGTTCCTCCCCC+GGG - chr3_4:11510900-11510919 Msa0490130:CDS 60.0%
TTGTCAATGGAACCCGGGGG+AGG + chr3_4:11510915-11510934 None:intergenic 60.0%
! CAAGGCATCAATCCCCCCCA+TGG + chr3_4:11511546-11511565 None:intergenic 60.0%
GCGGTCACCCTGGATATGCA+AGG + chr3_4:11511564-11511583 None:intergenic 60.0%
TGCATATCCAGGGTGACCGC+GGG - chr3_4:11511564-11511583 Msa0490130:CDS 60.0%
! GCTGGTTTCCCTGCAAGGAC+TGG - chr3_4:11511965-11511984 Msa0490130:CDS 60.0%
TCTGGCGAATCGGAAGCCGT+TGG - chr3_4:11512237-11512256 Msa0490130:CDS 60.0%
GAGGGTAGCAGTGCACGCAA+AGG - chr3_4:11512787-11512806 Msa0490130:CDS 60.0%
CAACACTCAGTTCCTCCCCC+GGG - chr3_4:11510900-11510919 Msa0490130:CDS 60.0%
TTGTCAATGGAACCCGGGGG+AGG + chr3_4:11510915-11510934 None:intergenic 60.0%
! CAAGGCATCAATCCCCCCCA+TGG + chr3_4:11511546-11511565 None:intergenic 60.0%
GCGGTCACCCTGGATATGCA+AGG + chr3_4:11511564-11511583 None:intergenic 60.0%
TGCATATCCAGGGTGACCGC+GGG - chr3_4:11511564-11511583 Msa0490130:CDS 60.0%
! GCTGGTTTCCCTGCAAGGAC+TGG - chr3_4:11511965-11511984 Msa0490130:CDS 60.0%
TCTGGCGAATCGGAAGCCGT+TGG - chr3_4:11512237-11512256 Msa0490130:CDS 60.0%
GAGGGTAGCAGTGCACGCAA+AGG - chr3_4:11512787-11512806 Msa0490130:CDS 60.0%
GCATATCCAGGGTGACCGCG+GGG - chr3_4:11511565-11511584 Msa0490130:CDS 65.0%
TATCTTCCCCGCGGTCACCC+TGG + chr3_4:11511574-11511593 None:intergenic 65.0%
AGGAAGACTCTCGGCTCCCG+AGG + chr3_4:11512011-11512030 None:intergenic 65.0%
GCATATCCAGGGTGACCGCG+GGG - chr3_4:11511565-11511584 Msa0490130:CDS 65.0%
TATCTTCCCCGCGGTCACCC+TGG + chr3_4:11511574-11511593 None:intergenic 65.0%
AGGAAGACTCTCGGCTCCCG+AGG + chr3_4:11512011-11512030 None:intergenic 65.0%
GACTCTCGGCTCCCGAGGAG+AGG + chr3_4:11512006-11512025 None:intergenic 70.0%
GACTCTCGGCTCCCGAGGAG+AGG + chr3_4:11512006-11512025 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 11510882 11512861 11510882 ID=Msa0490130;Name=Msa0490130
chr3_4 mRNA 11510882 11512861 11510882 ID=Msa0490130-mRNA-1;Parent=Msa0490130;Name=Msa0490130-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|-1|0|1|-1|1|1|0|659
chr3_4 exon 11510882 11512861 11510882 ID=Msa0490130-mRNA-1:exon:3565;Parent=Msa0490130-mRNA-1
chr3_4 CDS 11510882 11512861 11510882 ID=Msa0490130-mRNA-1:cds;Parent=Msa0490130-mRNA-1
Gene Sequence

>Msa0490130

ATGGAAGAAGGGTTAGGTCAACACTCAGTTCCTCCCCCGGGTTCCATTGACAAGTATAAGATTCTGGATATTAAGCCTATAAGAAGTTTGATACCTGTTTTTTCAAGGAATCCTCAAGGTCAATCTTCAGGTCAGTATCCTTCTGGGTTTTCTCCATTTTTCCCATTTGGTGGACCTCATGATACTTCAACTGCAAAGCCAAGTAGAGTGATGCCGACTCCACTTCAAGCATTTAGGAGCCCTTTTGGAGAGGATGAGGATCTCAATGACAATGATGGTTTTAGCAACAAAAGAAGTGCGGCAGCATCACATTCAAGCCGGGTCAGATTGAAGAAGCATAAGGTATATAATGATGTTCATGTTGATATGAGTGGTTTAGTTGGTATAAGCCCAGGTCAAAGAGACAATGGTAACCGTGAAGTTGTTAATATTGTGCTCATGACATTTGATGCGCTAAGAAGAAGGCTATCTCAACTTGTAGATGCCAAGGAATTGAACACGGGTTCGATCAAACGTACCGATTTAAAAGCTGGCAATATTTGTATGACCAAAGGAATTCGAACAAACACAGCGAAGAGGGTAGGATCAGTACCTGGAGTTGAGATTGGGGACATTTTCTTTTTCCGAATGGAAATGTGTGTTATCGGTTTGCATGCTCAATCCATGGGGGGGATTGATGCCTTGCATATCCAGGGTGACCGCGGGGAAGATACTTTGGCTGTTAGCATTGTTTCGTCAGGAGAATACGACGATGAAGCTGAGGATGGTGATGTTATAATTTATACCGGTCAGGGTGGGAATTTCAACAAGAAAGATAAGCATGTGTCAGATCAGAAGCTTCATAAGGGTAATCTTGCTTTGGATAGAAGTTCACGAACACACAATGAAATAAGAGTCATCCGAGGCATCAAAGATGCTGTGACTCCAGGTGCAAAAATCTATGTCTATGATGGTCTGTATAAAATTCAAGATTCATGGGTTGAAAAAGCAAAAGGAGGTGGTGGCTTGTTTAAGTATAAGTTGATAAGAGTGCCTGGACAACCTAGTGCCTTTGCCGTTTGGAAATCTGTTCAGAAGTGGAAAGCTGGTTTCCCTGCAAGGACTGGACTTATTCTTGCTGACCTCTCCTCGGGAGCCGAGAGTCTTCCTGTATCCCTTGTCAATGAAGTCGATAACGTGAAGTCACCTGCCTTTTTCACATATTTCCACTCTCTTAGACATCCGAAATCATTCAGTTTAATGCAGCCTTCACATAGTTGCAGCTGTAGTGGTAAAAAAGCATGTGTCCCTGGCGATTTGGACTGCTCATGCATTCGGAGAAATGAAGGTGATTTTCCGTATATTATCAATGGAGTTCTGGCGAATCGGAAGCCGTTGGTTCATGAATGTGGCCCCACATGTCAGTGTTTTCCTAACTGCAAAAATCGAGTATCCCAAACCGGTTTGAAGCACCAAATGGAAGTGTTCAAAACAAAGGATAAAGGTTGGGGTCTTCGGTCATGGGATCCTATTCGTGCTGGTGCTTTTATTTGCGAGTATGCAGGAGAAGTTATCGATAAAGCTAGGTTAAATCAGCTTGTACAAGAAGGAGATACTGATGAGTATGTTTTCGATACAACCCGTATTTATGAATCTTTCAAGTGGAATTATGAGCCTAAGTTACTAGAAGAAGCGGTCACAAATGAGTCTAATGAGGATTATGCTTTGCCACACCCTCTTATTATAAATGCTAAGAATGTTGGAAATGTGGCTAGATTCATGAATCATAGTTGCTCTCCAAATGTTTTCTGGCAGCCTGTCTTATATGAAGAGAACAACCAATCCTTTCTCCATGTTGCATTTTTTGCATTGAGACATATCCCACCAATGCATGAGTTAACATATGATTATGGTTCCGATCACACCGAGGGTAGCAGTGCACGCAAAGGTAGAAAGAAATGCTTATGTGGATCATCAAACTGCCGCGGTTCTTTTACTTGA
Protein sequence

>Msa0490130

MEEGLGQHSVPPPGSIDKYKILDIKPIRSLIPVFSRNPQGQSSGQYPSGFSPFFPFGGPHDTSTAKPSRVMPTPLQAFRSPFGEDEDLNDNDGFSNKRSAAASHSSRVRLKKHKVYNDVHVDMSGLVGISPGQRDNGNREVVNIVLMTFDALRRRLSQLVDAKELNTGSIKRTDLKAGNICMTKGIRTNTAKRVGSVPGVEIGDIFFFRMEMCVIGLHAQSMGGIDALHIQGDRGEDTLAVSIVSSGEYDDEAEDGDVIIYTGQGGNFNKKDKHVSDQKLHKGNLALDRSSRTHNEIRVIRGIKDAVTPGAKIYVYDGLYKIQDSWVEKAKGGGGLFKYKLIRVPGQPSAFAVWKSVQKWKAGFPARTGLILADLSSGAESLPVSLVNEVDNVKSPAFFTYFHSLRHPKSFSLMQPSHSCSCSGKKACVPGDLDCSCIRRNEGDFPYIINGVLANRKPLVHECGPTCQCFPNCKNRVSQTGLKHQMEVFKTKDKGWGLRSWDPIRAGAFICEYAGEVIDKARLNQLVQEGDTDEYVFDTTRIYESFKWNYEPKLLEEAVTNESNEDYALPHPLIINAKNVGNVARFMNHSCSPNVFWQPVLYEENNQSFLHVAFFALRHIPPMHELTYDYGSDHTEGSSARKGRKKCLCGSSNCRGSFT*