AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0576880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0576880 MtrunA17_Chr8g0381071 99.633 1089 4 0 1 1089 1 1089 0.0 2238
Msa0576880 MtrunA17_Chr1g0212891 23.207 1241 763 36 3 1085 1 1209 6.85e-69 252
Msa0576880 MtrunA17_Chr4g0064451 22.908 1231 725 42 3 1085 1 1155 1.95e-59 223
Msa0576880 MtrunA17_Chr4g0064641 23.635 1007 596 34 207 1085 134 1095 2.04e-49 191
Msa0576880 MtrunA17_Chr2g0291081 23.620 453 285 18 321 738 297 723 2.43e-23 107
Msa0576880 MtrunA17_Chr7g0268421 21.996 491 291 16 321 729 441 921 1.79e-21 101
Msa0576880 MtrunA17_Chr6g0475851 28.521 284 173 9 778 1041 1122 1395 9.89e-17 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0576880 AT4G05420.1 89.440 1089 114 1 1 1089 1 1088 0.0 2023
Msa0576880 AT4G21100.1 87.052 1089 140 1 1 1089 1 1088 0.0 1969
Msa0576880 AT4G05420.2 87.511 1089 114 2 1 1089 1 1067 0.0 1968
Msa0576880 AT3G55220.1 22.632 1246 762 38 3 1084 1 1208 1.72e-66 245
Msa0576880 AT3G55200.1 22.632 1246 762 38 3 1084 1 1208 1.72e-66 245
Msa0576880 AT3G55200.3 22.632 1246 762 38 3 1084 1 1208 1.72e-66 245
Msa0576880 AT3G55200.2 22.632 1246 762 38 3 1084 1 1208 1.72e-66 245
Msa0576880 AT3G11960.2 21.622 592 359 20 306 810 375 948 2.13e-26 117
Msa0576880 AT3G11960.4 21.622 592 359 20 306 810 433 1006 2.22e-26 117
Msa0576880 AT3G11960.1 21.622 592 359 20 306 810 433 1006 2.35e-26 117
Msa0576880 AT3G11960.3 21.622 592 359 20 306 810 433 1006 2.35e-26 117
Msa0576880 AT5G51660.1 25.753 299 190 9 762 1041 1104 1389 4.06e-14 78.2

Find 279 sgRNAs with CRISPR-Local

Find 751 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTTCTGCAGTCTATTT+TGG 0.124172 4_1:+80996938 Msa0576880:intron
CCACTTGACACTTATGAATA+TGG 0.189610 4_1:+81005605 Msa0576880:CDS
CTTGGAAAGGTATGTCAATT+TGG 0.198188 4_1:+81001881 Msa0576880:CDS
CAGATTCCAACTGTTATATT+TGG 0.208983 4_1:+81006557 Msa0576880:CDS
CTCTGTGGTGTGCTTATTAT+TGG 0.209216 4_1:+81000462 Msa0576880:CDS
GTTATATTTGGCACCATTAA+TGG 0.212435 4_1:+81006569 Msa0576880:CDS
GGCACCATTAATGGTGTTAT+TGG 0.214754 4_1:+81006578 Msa0576880:CDS
TACTGCTTGAACGCGTTTAA+TGG 0.225069 4_1:+81005894 Msa0576880:CDS
CACTTGGTTTACCTCGAAAT+TGG 0.228300 4_1:+81004382 Msa0576880:CDS
GATAATGCATTTGTCTATAT+TGG 0.243996 4_1:+81000988 Msa0576880:CDS
AAAATAATACATAAAGAAAA+TGG 0.258532 4_1:-81007102 None:intergenic
GAACTAGAACCTAACCAAAA+AGG 0.264298 4_1:+80995705 Msa0576880:five_prime_UTR
TACCCCAATAACACCATTAA+TGG 0.267127 4_1:-81006582 None:intergenic
GCACCATTAATGGTGTTATT+GGG 0.269623 4_1:+81006579 Msa0576880:CDS
GTCAAATTCGAGGAGGGGTT+TGG 0.276407 4_1:+80995728 Msa0576880:five_prime_UTR
AACATATGAGGTTGCTCTTA+AGG 0.276914 4_1:+81000359 Msa0576880:CDS
GCTTGAGGAGCTCCAAGTTT+TGG 0.285324 4_1:+80999466 Msa0576880:CDS
CTTGTATGACGGTTTGTTTA+AGG 0.292473 4_1:+80998011 Msa0576880:CDS
TTGGAAAGGTATGTCAATTT+GGG 0.296263 4_1:+81001882 Msa0576880:CDS
GTTATTCCCTTTGACAATAA+AGG 0.301699 4_1:+80998148 Msa0576880:CDS
CATCTCCTTGTTAATCTATA+AGG 0.308733 4_1:+81006082 Msa0576880:CDS
GCTCCTTTGTGATGAGATTA+AGG 0.312120 4_1:-81004558 None:intergenic
GCTTACTGCTCAGGGCTTGC+AGG 0.314406 4_1:+80996189 Msa0576880:CDS
CTCAAAACAGTCTTGATAAT+GGG 0.325345 4_1:+81000409 Msa0576880:CDS
CTTCAGTGATGCTGTGACTA+TGG 0.331679 4_1:+81007012 Msa0576880:three_prime_UTR
ACGGTGCATGCCACTCATTC+AGG 0.339662 4_1:-81003329 None:intergenic
ACAGTTTCTCTCGGTGTTGA+TGG 0.340767 4_1:-80995921 None:intergenic
GTCTCAAAATAGAGCCCCTT+GGG 0.342415 4_1:+81000932 Msa0576880:CDS
GTTCTTCTTTGTGCGTTTGA+AGG 0.343825 4_1:+81004610 Msa0576880:CDS
GACCTTGGCCTTGCCTTTCA+AGG 0.350635 4_1:-81001932 None:intergenic
GAGAAAGTCCGTAGAGTAAT+AGG 0.354675 4_1:-81005091 None:intergenic
GATCCTGATTGTAGGTTGAT+TGG 0.356316 4_1:+80997982 Msa0576880:CDS
TCAAATTCGAGGAGGGGTTT+GGG 0.356582 4_1:+80995729 Msa0576880:five_prime_UTR
AACACAAAACTTGTATCTTT+CGG 0.356832 4_1:-80997160 None:intergenic
CTCGGGACTATAATGCAAAT+TGG 0.363149 4_1:+81006327 Msa0576880:CDS
CGAAGATAAAGATGAGTATA+TGG 0.370628 4_1:+80995956 Msa0576880:exon
CAAATATAACAGTTGGAATC+TGG 0.372665 4_1:-81006556 None:intergenic
TCTCAAAACAGTCTTGATAA+TGG 0.374312 4_1:+81000408 Msa0576880:CDS
CTCATCACAAAGGAGCATTT+AGG 0.375598 4_1:+81004565 Msa0576880:CDS
GGCTACAGGTGGTGGGCACT+TGG 0.378105 4_1:+81004366 Msa0576880:CDS
CATATTCGCACTATTCCATT+GGG 0.381367 4_1:+81005434 Msa0576880:CDS
TTCTTCTTTGTGCGTTTGAA+GGG 0.385679 4_1:+81004611 Msa0576880:CDS
ATTAGCACTGCAGTATACTA+TGG 0.389127 4_1:-81000493 None:intergenic
AACTTGAGGAAGGTGATTAA+AGG 0.390385 4_1:+81006656 Msa0576880:CDS
GAGAGTTTATCAATCGGTTT+CGG 0.391578 4_1:+81006492 Msa0576880:CDS
AAATACATGGGTAGTATTCT+TGG 0.396304 4_1:-81005116 None:intergenic
AGCTGTACAAGTGGGTGCTC+CGG 0.397163 4_1:+81005949 Msa0576880:CDS
GAAGGGTGGTTTGATTTGAT+TGG 0.399081 4_1:-80995801 None:intergenic
ATCTGGCCTACGTCGGAATC+TGG 0.399624 4_1:-81006539 None:intergenic
CGTGTTGTTCGTAATGGAAT+AGG 0.401088 4_1:+81001996 Msa0576880:CDS
TGTAACAAGCTCGGATTTCT+CGG 0.401571 4_1:-80997196 None:intergenic
ATTTAACATACAGCTCTGAT+TGG 0.401669 4_1:-81000531 None:intergenic
GATTCACTTGCTTACTGCTC+AGG 0.403778 4_1:+80996180 Msa0576880:CDS
TGCTGCTAGCTGACTCTGAT+TGG 0.409702 4_1:-81004488 None:intergenic
GTCTATATTGGTTCAAGCTA+TGG 0.412748 4_1:+81001000 Msa0576880:CDS
ATAGTATACTGCAGTGCTAA+TGG 0.414262 4_1:+81000495 Msa0576880:CDS
ATTTCTGCCATCCAGATCAA+TGG 0.414475 4_1:+80997762 Msa0576880:intron
AGGCGCCACTGATGAAGAAC+GGG 0.416102 4_1:+81006436 Msa0576880:CDS
GTATTATAGATCCTGATTGT+AGG 0.416954 4_1:+80997974 Msa0576880:CDS
TATTTACTTGGTGACCATAC+AGG 0.421469 4_1:+81000715 Msa0576880:CDS
GGTCAGGTTGTGACTTGCTC+TGG 0.421885 4_1:+81001951 Msa0576880:CDS
AGAAGTAAAGCATGCCCAAC+TGG 0.424429 4_1:+81004420 Msa0576880:CDS
TATGTAACAAATGATTAAGT+AGG 0.425348 4_1:+81007154 Msa0576880:three_prime_UTR
CGAGTTAACAGATAGGAAAA+AGG 0.425998 4_1:+81005051 Msa0576880:CDS
CACCAATGGGATTAATGTCT+AGG 0.426916 4_1:-81004459 None:intergenic
ATTTATCAATTTACCTTGGT+TGG 0.430696 4_1:-81005716 None:intergenic
TTTCTGCCATCCAGATCAAT+GGG 0.431810 4_1:+80997763 Msa0576880:intron
TCATATTCGCACTATTCCAT+TGG 0.434143 4_1:+81005433 Msa0576880:CDS
ATTCACGAGTACCGTCTTCC+CGG 0.436927 4_1:-81005968 None:intergenic
CCACTCATTCAGGAGCTCTC+TGG 0.439072 4_1:-81003319 None:intergenic
TCCCTACGTGTTGTTCGTAA+TGG 0.439345 4_1:+81001990 Msa0576880:CDS
AGCTGTCCTTTATTGTCAAA+GGG 0.442075 4_1:-80998154 None:intergenic
TTGGACATTAAATTTCTGTA+TGG 0.443919 4_1:+80999485 Msa0576880:CDS
ATTCAGGAGCTCTCTGGTTG+TGG 0.450481 4_1:-81003313 None:intergenic
TGGAATAGGTATCAATGAAC+AGG 0.450725 4_1:+81002010 Msa0576880:CDS
AACTGAAACTTCCATCGCCT+TGG 0.450793 4_1:-81006813 None:intergenic
AAGGGTGGTTTGATTTGATT+GGG 0.451382 4_1:-80995800 None:intergenic
ATAGGAAGACCAACGGATAA+TGG 0.452314 4_1:+80997802 Msa0576880:CDS
TGCACGGCGGATATGCCATC+AGG 0.452950 4_1:+81005463 Msa0576880:CDS
TGGACACCACGGGCACATAC+TGG 0.458407 4_1:+81006004 Msa0576880:CDS
CAGGCAATTACAAAAGCCTA+TGG 0.460282 4_1:+81000667 Msa0576880:intron
TTGCTATGTGCCCTTGGTGA+TGG 0.460806 4_1:+81004992 Msa0576880:CDS
GTGCCCGTGGTGTCCACATT+CGG 0.461850 4_1:-81005997 None:intergenic
TCTTACTTGCTATGTGCCCT+TGG 0.462622 4_1:+81004986 Msa0576880:CDS
ATGTAACAAATGATTAAGTA+GGG 0.466255 4_1:+81007155 Msa0576880:three_prime_UTR
GACTTGCTCTGGAGCTTACA+AGG 0.466419 4_1:+81001962 Msa0576880:CDS
GAAATTTAATGTCCAAAACT+TGG 0.469071 4_1:-80999478 None:intergenic
AGAACCACGATAGTTGGCTT+TGG 0.470356 4_1:-80999512 None:intergenic
CCGATATGAAGTCAAAAGTC+TGG 0.472227 4_1:-81005577 None:intergenic
AACTATCGTGGTTCTTTACC+AGG 0.475287 4_1:+80999520 Msa0576880:CDS
GGTCAGATGCAGCAAATACA+TGG 0.476544 4_1:-81005129 None:intergenic
AAAGAAGGTGAGCTTACTAT+TGG 0.478013 4_1:+81005386 Msa0576880:CDS
AATCTTCAGCCTGATTCAAA+AGG 0.479108 4_1:+81001843 Msa0576880:CDS
AGTCAACTCTTCTACTCTCT+TGG 0.479215 4_1:-81006846 None:intergenic
CCGTCATGTTAAAACATATG+AGG 0.485421 4_1:+81000347 Msa0576880:CDS
GGGGATGTTTCTGATCGTAT+AGG 0.485443 4_1:+80997784 Msa0576880:CDS
AGGTTCTTATGTGGAAGTCT+TGG 0.486834 4_1:+81001863 Msa0576880:CDS
TGGGGCTGATTTATTGATAC+CGG 0.489580 4_1:+81000428 Msa0576880:CDS
GTAGACTAAGCAACCCTGTA+TGG 0.490396 4_1:-81000729 None:intergenic
GCATGAGGAAGGTGCTATTG+AGG 0.491604 4_1:+81006298 Msa0576880:intron
GCTGTACAAGTGGGTGCTCC+GGG 0.493964 4_1:+81005950 Msa0576880:CDS
GAGATTGAGGTCCTGAGGAC+TGG 0.494652 4_1:-80996040 None:intergenic
GATGGTTCTAGATATTTACT+TGG 0.497991 4_1:+81000703 Msa0576880:CDS
TGGTGTATGTTAATATGTAA+AGG 0.498557 4_1:+81007065 Msa0576880:three_prime_UTR
GTGCTATTGAGGAGAGAGCT+CGG 0.499902 4_1:+81006309 Msa0576880:CDS
CTGGAAGAAACTGAGATTGA+GGG 0.502406 4_1:+81002305 Msa0576880:CDS
GAGCTGTCCTTTATTGTCAA+AGG 0.502418 4_1:-80998155 None:intergenic
AAATCAAACCTGGGTTGCAT+TGG 0.503640 4_1:-81003379 None:intergenic
TGATCTCAAACGCAGTAAGA+TGG 0.507168 4_1:+81006781 Msa0576880:CDS
GCTGCTAGCTGACTCTGATT+GGG 0.509055 4_1:-81004487 None:intergenic
TGCCTAGACATTAATCCCAT+TGG 0.509950 4_1:+81004457 Msa0576880:CDS
TATGCCATCAGGAGCAAACT+AGG 0.511422 4_1:+81005474 Msa0576880:CDS
CACTTATAAAACTTACAACC+AGG 0.512183 4_1:-81002247 None:intergenic
AGGAAGGTGATTAAAGGCGT+TGG 0.513962 4_1:+81006662 Msa0576880:CDS
TTACTACTATAAATCACAGT+TGG 0.517519 4_1:-81005154 None:intergenic
TGAAAGGCAAGGCCAAGGTC+AGG 0.521844 4_1:+81001935 Msa0576880:CDS
ATGAGATTTCATACTCCAGT+TGG 0.522760 4_1:-81004435 None:intergenic
GCTGGAAGAAACTGAGATTG+AGG 0.523648 4_1:+81002304 Msa0576880:CDS
TATAGACAAATGCATTATCA+AGG 0.524077 4_1:-81000984 None:intergenic
ATGTATTTGCTGCATCTGAC+CGG 0.524765 4_1:+81005131 Msa0576880:CDS
ATGTCCTAGTTTGCTCCTGA+TGG 0.525861 4_1:-81005478 None:intergenic
CACCATTAATGGTGTTATTG+GGG 0.526170 4_1:+81006580 Msa0576880:CDS
ATGGTGCCAAATATAACAGT+TGG 0.526265 4_1:-81006563 None:intergenic
TGAGATTTCATACTCCAGTT+GGG 0.526292 4_1:-81004434 None:intergenic
GAAAAGCAGCGGAGTTGAAA+GGG 0.526389 4_1:-81005228 None:intergenic
AGTCCAATCAACCTACAATC+AGG 0.527246 4_1:-80997985 None:intergenic
ATTCACTTGCTTACTGCTCA+GGG 0.529196 4_1:+80996181 Msa0576880:CDS
ACCTTGGAGAGTTTATCAAT+CGG 0.530210 4_1:+81006486 Msa0576880:CDS
CAGAGTCAGCTAGCAGCAGT+TGG 0.530439 4_1:+81004493 Msa0576880:CDS
AAGACCAACGGATAATGGTC+AGG 0.533767 4_1:+80997807 Msa0576880:CDS
AACTGTAATACGTAACTGAC+AGG 0.533833 4_1:-81007130 None:intergenic
TGCTATTGAGGAGAGAGCTC+GGG 0.534621 4_1:+81006310 Msa0576880:CDS
TTCAAGCTATGGAGATTCAC+AGG 0.534786 4_1:+81001011 Msa0576880:CDS
GGATGAGATTTCCAAGGCGA+TGG 0.534862 4_1:+81006802 Msa0576880:CDS
AGTAAATATCTAGAACCATC+GGG 0.535099 4_1:-81000700 None:intergenic
GCACGGGCGAGTTAACAGAT+AGG 0.538982 4_1:+81005044 Msa0576880:CDS
TTATAGTAATGTTAATCTGA+AGG 0.539122 4_1:+81005189 Msa0576880:CDS
ACCACACAGAAGTCAACAAT+GGG 0.539394 4_1:-81001906 None:intergenic
TGATTCAAAAGGTTCTTATG+TGG 0.540128 4_1:+81001854 Msa0576880:CDS
TACTATAAATCACAGTTGGC+CGG 0.540250 4_1:-81005150 None:intergenic
CTTATAGATTAACAAGGAGA+TGG 0.540637 4_1:-81006081 None:intergenic
TAGGCATCAGTAGAACTTCA+AGG 0.541758 4_1:+81002170 Msa0576880:intron
GGAAAAGCAGCGGAGTTGAA+AGG 0.541858 4_1:-81005229 None:intergenic
CGGGGTCGTCTTGAAGTGGC+TGG 0.542845 4_1:+81006455 Msa0576880:CDS
CAGGAGTGAGTAACGTTGGT+AGG 0.543361 4_1:-80996003 None:intergenic
TGCTCTGGAGCTTACAAGGA+TGG 0.543423 4_1:+81001966 Msa0576880:CDS
GGTCTCAAAATAGAGCCCCT+TGG 0.545517 4_1:+81000931 Msa0576880:CDS
ACAACCAGGAAAGTGTCAAA+AGG 0.545952 4_1:-81002233 None:intergenic
TCTCTTCGAACAGTTTCTCT+CGG 0.546401 4_1:-80995930 None:intergenic
AAGAAATCAGATGGTCGAAT+CGG 0.547101 4_1:+81007180 Msa0576880:three_prime_UTR
AATGAATCTCGAGGATGAGC+TGG 0.549604 4_1:+81002286 Msa0576880:CDS
AGTTTAGCGATTGCAAAAGA+AGG 0.550027 4_1:+81005371 Msa0576880:intron
TGGTAAAGAACCACGATAGT+TGG 0.550533 4_1:-80999518 None:intergenic
AGCACACCACAGAGTGGTGG+GGG 0.551042 4_1:-81000453 None:intergenic
ATTGGACTCCACTTGTATGA+CGG 0.551218 4_1:+80998000 Msa0576880:CDS
AGAAGCTTCAGTCAAACTTG+AGG 0.552351 4_1:+81006642 Msa0576880:CDS
GTTTACCTCGAAATTGGAGA+TGG 0.552837 4_1:+81004388 Msa0576880:CDS
GTAGAACTTCAAGGTATCAA+AGG 0.553027 4_1:+81002179 Msa0576880:CDS
GTAGCAATTCTTCCATATAA+CGG 0.553139 4_1:-80996966 None:intergenic
AGCAAGTCACAACCTGACCT+TGG 0.554672 4_1:-81001947 None:intergenic
AAGGTGATTAAAGGCGTTGG+AGG 0.556474 4_1:+81006665 Msa0576880:CDS
AATACCTGACCATTATCCGT+TGG 0.558143 4_1:-80997811 None:intergenic
GAGGACTCAGCCACGAGCAG+TGG 0.559645 4_1:+81006684 Msa0576880:CDS
AAGTAAATATCTAGAACCAT+CGG 0.560049 4_1:-81000701 None:intergenic
ATATACCATCTCCAATTTCG+AGG 0.562164 4_1:-81004393 None:intergenic
AACAAAAGAAGCTTCAAATG+AGG 0.562736 4_1:-81006887 None:intergenic
GTATGAAATCGTAGATGCAA+TGG 0.563213 4_1:-81000962 None:intergenic
CACGTTATTATCATCTGAGA+AGG 0.563580 4_1:-81005648 None:intergenic
AGTCCGAATGTGGACACCAC+GGG 0.565397 4_1:+81005994 Msa0576880:CDS
GAATGGTTTGCATTTGACAA+TGG 0.566655 4_1:+81007034 Msa0576880:three_prime_UTR
TCAACATAAAGTTTAAGAGA+TGG 0.567060 4_1:-81005015 None:intergenic
ATTTGACAATGGATCACAAA+TGG 0.567221 4_1:+81007045 Msa0576880:three_prime_UTR
TAAGCACACCACAGAGTGGT+GGG 0.568719 4_1:-81000455 None:intergenic
GAACACAACCTATTACTCTA+CGG 0.569345 4_1:+81005083 Msa0576880:CDS
CTGACGCGAGAATGAGATTG+AGG 0.569460 4_1:-80996053 None:intergenic
TAAACAAACCGTCATACAAG+TGG 0.570098 4_1:-80998008 None:intergenic
ATTTACTTGGTGACCATACA+GGG 0.570110 4_1:+81000716 Msa0576880:CDS
TGACAATAAAGGACAGCTCA+AGG 0.570702 4_1:+80998159 Msa0576880:CDS
GTTGCCGAGAAAGAGACAAA+AGG 0.576433 4_1:+81005864 Msa0576880:CDS
TCTGTGTGGTAGACCTTGAA+AGG 0.576761 4_1:+81001919 Msa0576880:CDS
AAAGGGTCAAATTCGAGGAG+GGG 0.578450 4_1:+80995723 Msa0576880:five_prime_UTR
TAGAAGTGAAAGTGAGAGAG+TGG 0.579324 4_1:+80995757 Msa0576880:five_prime_UTR
AGCTAGCAGCAGTTGGAATG+TGG 0.579983 4_1:+81004500 Msa0576880:CDS
AAAAGGGTCAAATTCGAGGA+GGG 0.581046 4_1:+80995722 Msa0576880:five_prime_UTR
AGAGAGTAGAAGAGTTGACT+AGG 0.582187 4_1:+81006849 Msa0576880:CDS
TCCATTACGAACAACACGTA+GGG 0.584653 4_1:-81001991 None:intergenic
ACCGATTGATAAACTCTCCA+AGG 0.587479 4_1:-81006487 None:intergenic
TTACAGTGAGAAATGCGATA+GGG 0.588193 4_1:-80995896 None:intergenic
TTTATCAATCGGTTTCGGCA+TGG 0.590347 4_1:+81006497 Msa0576880:CDS
AATAACGTGTATTACTGTGT+TGG 0.590857 4_1:+81005662 Msa0576880:CDS
AGCTACTGCCAATGCAACCC+AGG 0.591282 4_1:+81003371 Msa0576880:CDS
CCAGAGAGCTCCTGAATGAG+TGG 0.591702 4_1:+81003319 Msa0576880:CDS
AAAAGATTCAGCTGTACAAG+TGG 0.592478 4_1:+81005940 Msa0576880:CDS
TCTTTCACTTCTCACAACTA+CGG 0.592904 4_1:-80995860 None:intergenic
TATTCGCACTATTCCATTGG+GGG 0.593012 4_1:+81005436 Msa0576880:CDS
CGATTGATTGATTGAGTGAA+GGG 0.593413 4_1:-80995818 None:intergenic
CCATATTCATAAGTGTCAAG+TGG 0.594109 4_1:-81005605 None:intergenic
TGAATACCGTGTAACAAGCT+CGG 0.594863 4_1:-80997205 None:intergenic
TGCAATGGAAGTCTCCCCAA+GGG 0.594926 4_1:-81000947 None:intergenic
TTTGTGATGAGATTAAGGTC+AGG 0.595391 4_1:-81004553 None:intergenic
AAGAATACATACTGCTCATG+AGG 0.595780 4_1:-81006617 None:intergenic
AAGTGGGTGCTCCGGGAAGA+CGG 0.597239 4_1:+81005957 Msa0576880:CDS
AAGGCGCCACTGATGAAGAA+CGG 0.598090 4_1:+81006435 Msa0576880:CDS
AGTAGGGGTAAGAAATCAGA+TGG 0.599820 4_1:+81007171 Msa0576880:three_prime_UTR
TCTTCTTTGTGCGTTTGAAG+GGG 0.600024 4_1:+81004612 Msa0576880:CDS
GTCAAAAGGATCATCTGTTG+AGG 0.600103 4_1:-81002219 None:intergenic
ATCACTGAAGGCAAAAGCCA+TGG 0.603694 4_1:-81006999 None:intergenic
CTTTATGTTGAACACAAGCA+CGG 0.604008 4_1:+81005027 Msa0576880:CDS
TTTACAGTGAGAAATGCGAT+AGG 0.604828 4_1:-80995897 None:intergenic
CGTGAATTACAGTCCGAATG+TGG 0.606634 4_1:+81005984 Msa0576880:CDS
GCTTTATATGTGCAAACTAG+AGG 0.606872 4_1:+81006026 Msa0576880:CDS
ATCACAAAGGAGCATTTAGG+AGG 0.610354 4_1:+81004568 Msa0576880:CDS
ATCGGGATCAACTCTTCCAT+AGG 0.610920 4_1:-81000683 None:intergenic
CTCGATGATGATGTATACCT+TGG 0.611867 4_1:+81006368 Msa0576880:CDS
TCAAAACAGTCTTGATAATG+GGG 0.617072 4_1:+81000410 Msa0576880:CDS
TTTATGTTGAACACAAGCAC+GGG 0.617201 4_1:+81005028 Msa0576880:CDS
TAAGAGATGGCCATCACCAA+GGG 0.617601 4_1:-81005002 None:intergenic
ACTGGTAAAATTGCCGACGC+AGG 0.618944 4_1:-80996022 None:intergenic
CATAGTCACAGCATCACTGA+AGG 0.619845 4_1:-81007011 None:intergenic
CATGGTAAAAGTATAAAACA+TGG 0.620500 4_1:-81006981 None:intergenic
GGCGATGGAAGTTTCAGTTG+AGG 0.620659 4_1:+81006817 Msa0576880:CDS
TCTCAAACAGGGTGAAACAC+AGG 0.620922 4_1:+80997119 Msa0576880:intron
CTTATGTGGAAGTCTTGGAA+AGG 0.622163 4_1:+81001868 Msa0576880:CDS
GACCTTGAAAGGCAAGGCCA+AGG 0.622215 4_1:+81001930 Msa0576880:CDS
TGGAAAGGTATGTCAATTTG+GGG 0.626097 4_1:+81001883 Msa0576880:CDS
TACCACACAGAAGTCAACAA+TGG 0.626309 4_1:-81001907 None:intergenic
GTGGTAGACCTTGAAAGGCA+AGG 0.626438 4_1:+81001924 Msa0576880:CDS
TTGATTGATTGAGTGAAGGG+TGG 0.628638 4_1:-80995815 None:intergenic
AATATTAGCAATGAATCTCG+AGG 0.628669 4_1:+81002277 Msa0576880:CDS
TCGATTGATTGATTGAGTGA+AGG 0.628709 4_1:-80995819 None:intergenic
AGAACGGGGTCGTCTTGAAG+TGG 0.628760 4_1:+81006451 Msa0576880:CDS
GCTTCAGTCAAACTTGAGGA+AGG 0.634483 4_1:+81006646 Msa0576880:CDS
GTTGATTGTGAACTGCATCA+TGG 0.634822 4_1:-81002358 None:intergenic
TAAATGATCTCCACTGCTCG+TGG 0.635705 4_1:-81006694 None:intergenic
ATAAGCACACCACAGAGTGG+TGG 0.635800 4_1:-81000456 None:intergenic
AAGTCTGGTCATCCAGCAAG+CGG 0.636118 4_1:-81005562 None:intergenic
ATACTGCTCATGAGGAAGAG+AGG 0.637193 4_1:-81006609 None:intergenic
ACGACCCCGTTCTTCATCAG+TGG 0.639453 4_1:-81006441 None:intergenic
TTAAGAGATGGCCATCACCA+AGG 0.643603 4_1:-81005003 None:intergenic
AACGTTACTCACTCCTGCGT+CGG 0.644357 4_1:+80996009 Msa0576880:CDS
ATATTCGCACTATTCCATTG+GGG 0.646014 4_1:+81005435 Msa0576880:CDS
AGAATGAGATTGAGGTCCTG+AGG 0.647133 4_1:-80996045 None:intergenic
TAAGATGGATGAGATTTCCA+AGG 0.648525 4_1:+81006796 Msa0576880:CDS
TTCAAGGTATCAAAGGAATG+TGG 0.648680 4_1:+81002186 Msa0576880:CDS
TGTAACAAATGATTAAGTAG+GGG 0.648684 4_1:+81007156 Msa0576880:three_prime_UTR
GTGATGCTGTGACTATGGAA+TGG 0.649789 4_1:+81007017 Msa0576880:three_prime_UTR
AAAGATTCAGCTGTACAAGT+GGG 0.651626 4_1:+81005941 Msa0576880:CDS
GACGCAGGAGTGAGTAACGT+TGG 0.653403 4_1:-80996007 None:intergenic
ATGCAATGGAAGTCTCCCCA+AGG 0.653448 4_1:-81000948 None:intergenic
GTCAGATGCAGCAAATACAT+GGG 0.655484 4_1:-81005128 None:intergenic
TATGGAAGAGTTGATCCCGA+TGG 0.657170 4_1:+81000685 Msa0576880:CDS
ACATTTACTGAATAGTCTGA+CGG 0.659621 4_1:-81003348 None:intergenic
AAGCACACCACAGAGTGGTG+GGG 0.659719 4_1:-81000454 None:intergenic
ATACCTGTCGGGAAAAGCAG+CGG 0.660425 4_1:-81005239 None:intergenic
AACGTTGGTAGGTTTGTGAG+CGG 0.663586 4_1:-80995992 None:intergenic
ATAAAGCCAGTATGTGCCCG+TGG 0.667188 4_1:-81006010 None:intergenic
TTGTCCAAAGCCAACTATCG+TGG 0.667457 4_1:+80999508 Msa0576880:CDS
CGCTTGCCAGATTCCGACGT+AGG 0.669993 4_1:+81006533 Msa0576880:CDS
TGAGGAAAATGAACCAACCA+AGG 0.671084 4_1:+81005703 Msa0576880:CDS
CACTTCTCACAACTACGGAG+CGG 0.673212 4_1:-80995855 None:intergenic
GTGGCTGGTGAGTATCACCT+TGG 0.674283 4_1:+81006470 Msa0576880:CDS
ACTTACCTTATAGATTAACA+AGG 0.677737 4_1:-81006087 None:intergenic
TGGCGTCGCAACGCACACAA+CGG 0.680119 4_1:+80995777 Msa0576880:five_prime_UTR
GCCCATTGTTGACTTCTGTG+TGG 0.680795 4_1:+81001905 Msa0576880:CDS
TGATCGTATAGGAAGACCAA+CGG 0.681863 4_1:+80997795 Msa0576880:CDS
AGTTGGAATCTGGCCTACGT+CGG 0.682964 4_1:-81006546 None:intergenic
TGACCTTAATCTCATCACAA+AGG 0.685342 4_1:+81004555 Msa0576880:CDS
TCTGCCATCCAGATCAATGG+GGG 0.693266 4_1:+80997765 Msa0576880:intron
AGAAATCCGAGCTTGTTACA+CGG 0.698318 4_1:+80997199 Msa0576880:CDS
CAGTCCGAATGTGGACACCA+CGG 0.701088 4_1:+81005993 Msa0576880:CDS
GCACAAAGAAGAACAGATCG+AGG 0.713582 4_1:-81004601 None:intergenic
GCAATGGAAGTCTCCCCAAG+GGG 0.729886 4_1:-81000946 None:intergenic
TTCTGCCATCCAGATCAATG+GGG 0.734840 4_1:+80997764 Msa0576880:intron
TTCCATTACGAACAACACGT+AGG 0.739243 4_1:-81001992 None:intergenic
AACTGCATATGTATTGCCTG+AGG 0.740158 4_1:+81005685 Msa0576880:CDS
TCTCAAAATAGAGCCCCTTG+GGG 0.740613 4_1:+81000933 Msa0576880:CDS
ATAATAAGCACACCACAGAG+TGG 0.754539 4_1:-81000459 None:intergenic
GGCGCCACTGATGAAGAACG+GGG 0.758258 4_1:+81006437 Msa0576880:CDS
CAAGGTATACATCATCATCG+AGG 0.761046 4_1:-81006367 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATATTTAAAAAAAATCAA+AGG + chr4_1:80997492-80997511 Msa0576880:intron 10.0%
!!! AAAATAAAATCTTTTTCTTT+TGG - chr4_1:81002088-81002107 None:intergenic 10.0%
!!! TTTGTATAATTTTAGAAATA+TGG + chr4_1:81002447-81002466 Msa0576880:intron 10.0%
!!! ATTTTAAAATTAAAGAAAAG+TGG - chr4_1:81002554-81002573 None:intergenic 10.0%
!!! AATTTTACTTTATTTATTCT+TGG + chr4_1:81003989-81004008 Msa0576880:intron 10.0%
!!! ATTTTACTTTATTTATTCTT+GGG + chr4_1:81003990-81004009 Msa0576880:intron 10.0%
!! GAAATAAATAAATAAAATGA+AGG - chr4_1:81005786-81005805 None:intergenic 10.0%
!! AAAATAATACATAAAGAAAA+TGG - chr4_1:81007105-81007124 None:intergenic 10.0%
!! ATTAGAATTTATTCTAACTT+GGG - chr4_1:80996718-80996737 None:intergenic 15.0%
!!! GAAATCAATAGAATTTATTT+TGG + chr4_1:80996776-80996795 Msa0576880:intron 15.0%
!!! GACAATTTTTAAAATGTTTT+TGG + chr4_1:81000111-81000130 Msa0576880:intron 15.0%
!!! ATATATTACATAATGGAAAT+AGG - chr4_1:81000251-81000270 None:intergenic 15.0%
!! TTTCCATTATGTAATATATT+TGG + chr4_1:81000252-81000271 Msa0576880:intron 15.0%
!!! ATAATAGACATTTATTTTGT+AGG + chr4_1:81000902-81000921 Msa0576880:intron 15.0%
!!! TAATAGACATTTATTTTGTA+GGG + chr4_1:81000903-81000922 Msa0576880:intron 15.0%
!! ATATGTTGTTAAATTATGTT+TGG - chr4_1:81001352-81001371 None:intergenic 15.0%
!! TAAAGATGGAAATTATATAT+TGG + chr4_1:81001479-81001498 Msa0576880:intron 15.0%
!! AAATTATATATTGGAAATTG+TGG + chr4_1:81001488-81001507 Msa0576880:intron 15.0%
!! TACCTTATTATACAAAAAAT+GGG - chr4_1:81002615-81002634 None:intergenic 15.0%
!! ATGCATATATAAAAATAATC+TGG + chr4_1:81002673-81002692 Msa0576880:intron 15.0%
!!! TTTCGTTTTAAAAACTTATA+GGG + chr4_1:81003656-81003675 Msa0576880:intron 15.0%
!! TTGAGTATTTATTTATTTGT+GGG + chr4_1:81004049-81004068 Msa0576880:intron 15.0%
!! AGTAAATTTAAATCATAATC+GGG - chr4_1:81004711-81004730 None:intergenic 15.0%
!! GAGTAAATTTAAATCATAAT+CGG - chr4_1:81004712-81004731 None:intergenic 15.0%
!!! ATTTTTTTGTTAGCAATTTT+AGG + chr4_1:81004753-81004772 Msa0576880:intron 15.0%
!! TAAATAAATAAAATGAAGGT+AGG - chr4_1:81005782-81005801 None:intergenic 15.0%
!! AACAAATGTATTATTACAAA+AGG - chr4_1:81006262-81006281 None:intergenic 15.0%
!!! ATTTCTTTTAATTTTCATCC+AGG + chr4_1:80996140-80996159 Msa0576880:intron 20.0%
!!! AGTTTTTAGTGATTTATGTA+TGG + chr4_1:80996348-80996367 Msa0576880:intron 20.0%
!! CATTAGAATTTATTCTAACT+TGG - chr4_1:80996719-80996738 None:intergenic 20.0%
!! CAAGTTAGAATAAATTCTAA+TGG + chr4_1:80996717-80996736 Msa0576880:intron 20.0%
!!! ACTTTTTACATGTTCAATTT+TGG + chr4_1:80996872-80996891 Msa0576880:intron 20.0%
!!! GTTCATTTTGTTAATTTGTT+TGG + chr4_1:80997379-80997398 Msa0576880:intron 20.0%
!!! TTTTGTTAATTTGTTTGGAA+TGG + chr4_1:80997384-80997403 Msa0576880:intron 20.0%
!!! TTTGTTAATTTGTTTGGAAT+GGG + chr4_1:80997385-80997404 Msa0576880:intron 20.0%
!!! TTTTATCTATGTATAGCTAT+AGG + chr4_1:80997682-80997701 Msa0576880:intron 20.0%
!! ATTGATGTTCTTATAGAATT+GGG - chr4_1:80997881-80997900 None:intergenic 20.0%
!! AAAGGAACTATTCATATATT+TGG + chr4_1:80998418-80998437 Msa0576880:intron 20.0%
!! ATAATAATGCCATCTTTATA+TGG + chr4_1:80998655-80998674 Msa0576880:intron 20.0%
!! TAAAAAAACTGTATCATTCA+TGG + chr4_1:80998810-80998829 Msa0576880:intron 20.0%
!!! TTCTTTAAGTCTTTTGTATT+AGG + chr4_1:80998884-80998903 Msa0576880:intron 20.0%
!!! TGCATTTTTTTAAATAACAG+CGG - chr4_1:80998913-80998932 None:intergenic 20.0%
!! TTTAAGCAAATTGAGATAAT+TGG + chr4_1:80999087-80999106 Msa0576880:intron 20.0%
!!! TTGTTCATTTCACAATTTTT+AGG + chr4_1:80999866-80999885 Msa0576880:intron 20.0%
!!! ATATTAACTTGAAAAACGAA+AGG - chr4_1:80999962-80999981 None:intergenic 20.0%
!!! ACAGAAAAAGATTTGTTTAT+GGG + chr4_1:80999989-81000008 Msa0576880:intron 20.0%
!! CAATAAATACTTACTATTTG+TGG + chr4_1:81001547-81001566 Msa0576880:intron 20.0%
!!! TTTATCTATTTTTCCTACTA+TGG + chr4_1:81002396-81002415 Msa0576880:intron 20.0%
!! CTAAAATTATACAAAGATGT+AGG - chr4_1:81002442-81002461 None:intergenic 20.0%
!! ACCTTATTATACAAAAAATG+GGG - chr4_1:81002614-81002633 None:intergenic 20.0%
!! GTACCTTATTATACAAAAAA+TGG - chr4_1:81002616-81002635 None:intergenic 20.0%
!! TATAACTCTTTGACATTAAT+TGG - chr4_1:81002978-81002997 None:intergenic 20.0%
!!! AACAGAAGAATTTTAGTTTA+GGG - chr4_1:81003192-81003211 None:intergenic 20.0%
!! TTGGTTTATTAGATAATGAT+AGG - chr4_1:81003254-81003273 None:intergenic 20.0%
!! TACTCTATAAACTAAAGATA+GGG - chr4_1:81003596-81003615 None:intergenic 20.0%
!!! GTTTCGTTTTAAAAACTTAT+AGG + chr4_1:81003655-81003674 Msa0576880:intron 20.0%
!! AGTAAAATTTGCATATTCTA+GGG - chr4_1:81003978-81003997 None:intergenic 20.0%
!! AAGTAAAATTTGCATATTCT+AGG - chr4_1:81003979-81003998 None:intergenic 20.0%
!! CTTGAGTATTTATTTATTTG+TGG + chr4_1:81004048-81004067 Msa0576880:intron 20.0%
!! AAATAAAAGCTGGTTATTAA+GGG - chr4_1:81004111-81004130 None:intergenic 20.0%
!! AAAATAAAAGCTGGTTATTA+AGG - chr4_1:81004112-81004131 None:intergenic 20.0%
!!! ATAACCAGCTTTTATTTTTA+AGG + chr4_1:81004114-81004133 Msa0576880:intron 20.0%
!!! TAACCAGCTTTTATTTTTAA+GGG + chr4_1:81004115-81004134 Msa0576880:intron 20.0%
!! TTGATAAGTATAAATGTACT+TGG - chr4_1:81004149-81004168 None:intergenic 20.0%
!! GTACATTTATACTTATCAAT+TGG + chr4_1:81004150-81004169 Msa0576880:intron 20.0%
!! ACATAAATAAAGATAGCTTA+AGG - chr4_1:81004646-81004665 None:intergenic 20.0%
!!! TTTTAGGTTTTAACATATGT+TGG + chr4_1:81004769-81004788 Msa0576880:intron 20.0%
!!! TTAATACAATGTTTTGAACT+AGG - chr4_1:81004932-81004951 None:intergenic 20.0%
!! TTATAGTAATGTTAATCTGA+AGG + chr4_1:81005189-81005208 Msa0576880:CDS 20.0%
!! AAAAGAAGAAAAAAGTTACA+AGG - chr4_1:81006930-81006949 None:intergenic 20.0%
!! TATGTAACAAATGATTAAGT+AGG + chr4_1:81007154-81007173 Msa0576880:three_prime_UTR 20.0%
!! ATGTAACAAATGATTAAGTA+GGG + chr4_1:81007155-81007174 Msa0576880:three_prime_UTR 20.0%
! ATTGAAAATCAAATTTCCAC+AGG - chr4_1:80996324-80996343 None:intergenic 25.0%
!!! AACTTCAAATTCTAGCTTTA+AGG + chr4_1:80996435-80996454 Msa0576880:intron 25.0%
!!! CAACTTAATTTGCAACTTAT+AGG + chr4_1:80996473-80996492 Msa0576880:intron 25.0%
! TCAATTAGTCAATCAAAACA+TGG + chr4_1:80996692-80996711 Msa0576880:intron 25.0%
!!! TCTATTGATTTCGACATTTT+TGG - chr4_1:80996768-80996787 None:intergenic 25.0%
!! TTTACATGTTCAATTTTGGA+TGG + chr4_1:80996876-80996895 Msa0576880:intron 25.0%
! GATGGTTATGTAAATTGTAA+TGG + chr4_1:80996894-80996913 Msa0576880:intron 25.0%
!! TTTTTATGATTCTCACATGA+GGG - chr4_1:80997007-80997026 None:intergenic 25.0%
!!! TTTGTTTTGTTCTCAAACTA+AGG + chr4_1:80997060-80997079 Msa0576880:intron 25.0%
! AACACAAAACTTGTATCTTT+CGG - chr4_1:80997163-80997182 None:intergenic 25.0%
!!! TTGTTAATTTGTTTGGAATG+GGG + chr4_1:80997386-80997405 Msa0576880:intron 25.0%
! CATTGATGTTCTTATAGAAT+TGG - chr4_1:80997882-80997901 None:intergenic 25.0%
! TATTCTTTATCCTGTGAAAA+TGG + chr4_1:80998049-80998068 Msa0576880:intron 25.0%
! TAACTGGTAATCATTAATCA+AGG - chr4_1:80998302-80998321 None:intergenic 25.0%
!!! ATTTTCTTTGAAACAGCAAA+AGG + chr4_1:80998400-80998419 Msa0576880:intron 25.0%
!! GTTTTTATCAAGTTTAGTAG+AGG + chr4_1:80998449-80998468 Msa0576880:intron 25.0%
! CCATTTGGAAGAAAAAAAAA+AGG - chr4_1:80998522-80998541 None:intergenic 25.0%
!!! CCTTTTTTTTTTCTTCCAAA+TGG + chr4_1:80998519-80998538 Msa0576880:intron 25.0%
!!! TTTTTTTTTCTTCCAAATGG+TGG + chr4_1:80998522-80998541 Msa0576880:intron 25.0%
!!! TTTTTTTTCTTCCAAATGGT+GGG + chr4_1:80998523-80998542 Msa0576880:intron 25.0%
! ATATGACAGATAACTGAAAA+CGG - chr4_1:80998598-80998617 None:intergenic 25.0%
!! TTTTCTTCTCCATATAAAGA+TGG - chr4_1:80998667-80998686 None:intergenic 25.0%
! TGGATCAATAAATAGTAAGT+TGG + chr4_1:80998719-80998738 Msa0576880:intron 25.0%
!! TTAATTTTGAATTGAGCAAC+AGG - chr4_1:80998745-80998764 None:intergenic 25.0%
!!! GATTTATGGTTTTAAACCAT+TGG + chr4_1:80998847-80998866 Msa0576880:intron 25.0%
!!! GCATTTTTTTAAATAACAGC+GGG - chr4_1:80998912-80998931 None:intergenic 25.0%
! ATTTAAAAAAATGCAACCCT+AGG + chr4_1:80998918-80998937 Msa0576880:intron 25.0%
! TTTCAGTTATGTTATCTTAG+AGG + chr4_1:80998995-80999014 Msa0576880:intron 25.0%
! TCTTAGAGGACATTAAAATA+TGG + chr4_1:80999009-80999028 Msa0576880:intron 25.0%
! CTTAGAGGACATTAAAATAT+GGG + chr4_1:80999010-80999029 Msa0576880:intron 25.0%
! TGAATTATTGAAAACTCGAT+AGG - chr4_1:80999257-80999276 None:intergenic 25.0%
!! TCTTTTCATTACAGTTTTTC+TGG + chr4_1:80999284-80999303 Msa0576880:intron 25.0%
!! CTTTTCATTACAGTTTTTCT+GGG + chr4_1:80999285-80999304 Msa0576880:intron 25.0%
! TTAATTATCATAAGCAGAGA+AGG - chr4_1:80999423-80999442 None:intergenic 25.0%
!!! ATTATGATCTCTTTGTTTTC+AGG + chr4_1:80999444-80999463 Msa0576880:intron 25.0%
! GAAATTTAATGTCCAAAACT+TGG - chr4_1:80999481-80999500 None:intergenic 25.0%
! TTGGACATTAAATTTCTGTA+TGG + chr4_1:80999485-80999504 Msa0576880:CDS 25.0%
! AAATTCAAACAAGATCAAGA+GGG - chr4_1:80999696-80999715 None:intergenic 25.0%
! TAAATTCAAACAAGATCAAG+AGG - chr4_1:80999697-80999716 None:intergenic 25.0%
!! GTTAGATTTCTAGGTAAATT+TGG - chr4_1:80999769-80999788 None:intergenic 25.0%
! AGGAAGGCTTAAAAATATTA+TGG + chr4_1:80999796-80999815 Msa0576880:intron 25.0%
!!! CATTTCACAATTTTTAGGAA+TGG + chr4_1:80999871-80999890 Msa0576880:intron 25.0%
!! GACAGAAAAAGATTTGTTTA+TGG + chr4_1:80999988-81000007 Msa0576880:intron 25.0%
! TATCATAGCAGTAACTAAAA+AGG + chr4_1:81000034-81000053 Msa0576880:intron 25.0%
! GAGCCAAATATATTACATAA+TGG - chr4_1:81000258-81000277 None:intergenic 25.0%
! TCAAAATGTTAAGCTAAAAG+CGG - chr4_1:81000290-81000309 None:intergenic 25.0%
!! ATTACATTTTCATCAATGTC+AGG + chr4_1:81000311-81000330 Msa0576880:intron 25.0%
!! TAAGGATAAAGATTTTGTTG+AGG + chr4_1:81000377-81000396 Msa0576880:CDS 25.0%
!! AAGGATAAAGATTTTGTTGA+GGG + chr4_1:81000378-81000397 Msa0576880:CDS 25.0%
!! TTATACCTTATGTACTTTTC+AGG + chr4_1:81000648-81000667 Msa0576880:intron 25.0%
! TATAGACAAATGCATTATCA+AGG - chr4_1:81000987-81001006 None:intergenic 25.0%
! GATAATGCATTTGTCTATAT+TGG + chr4_1:81000988-81001007 Msa0576880:CDS 25.0%
! TGTTTATACAGTAAATAGCA+AGG + chr4_1:81001256-81001275 Msa0576880:intron 25.0%
!!! TAAATTATGTTTGGTGTACT+AGG - chr4_1:81001343-81001362 None:intergenic 25.0%
! AAAAGAGAAGGTAAAAACAT+AGG + chr4_1:81001416-81001435 Msa0576880:intron 25.0%
! AAAGAGAAGGTAAAAACATA+GGG + chr4_1:81001417-81001436 Msa0576880:intron 25.0%
!! TGTCTTGTAGATTTATGTTT+TGG - chr4_1:81001614-81001633 None:intergenic 25.0%
!!! ACACATCAGAATTTGTTAAT+AGG - chr4_1:81001802-81001821 None:intergenic 25.0%
! TTAACAAAAAACACCATAGT+AGG - chr4_1:81002412-81002431 None:intergenic 25.0%
!!! ACCCCATTTTTTGTATAATA+AGG + chr4_1:81002610-81002629 Msa0576880:intron 25.0%
! TAAGAAATAAATCCTGTCTT+GGG - chr4_1:81002746-81002765 None:intergenic 25.0%
!! GGATTTATTTCTTAGTACTA+TGG + chr4_1:81002752-81002771 Msa0576880:intron 25.0%
! TGAATACAAAGATTACTGAT+AGG + chr4_1:81003005-81003024 Msa0576880:intron 25.0%
!!! CAACAGAAGAATTTTAGTTT+AGG - chr4_1:81003193-81003212 None:intergenic 25.0%
! GTACTCTATAAACTAAAGAT+AGG - chr4_1:81003597-81003616 None:intergenic 25.0%
!! ATCTTTAGTTTATAGAGTAC+TGG + chr4_1:81003597-81003616 Msa0576880:intron 25.0%
! TTAACTTAAGAATTAACCCA+AGG - chr4_1:81003716-81003735 None:intergenic 25.0%
! GGGTTAATTCTTAAGTTAAA+AGG + chr4_1:81003717-81003736 Msa0576880:intron 25.0%
! AATTTCAATGAGTGTTAGAT+TGG + chr4_1:81003867-81003886 Msa0576880:intron 25.0%
! GTGAATGAAATATTGAAAGA+AGG - chr4_1:81003917-81003936 None:intergenic 25.0%
!!! TTATTTATTCTTGGGTTGAA+AGG + chr4_1:81003998-81004017 Msa0576880:intron 25.0%
!!! TATTTATTCTTGGGTTGAAA+GGG + chr4_1:81003999-81004018 Msa0576880:intron 25.0%
!!! GGAAAAGTATTTAAGTGATT+GGG + chr4_1:81004078-81004097 Msa0576880:intron 25.0%
!! ATTGACTTAAATGGAATAAG+AGG - chr4_1:81004222-81004241 None:intergenic 25.0%
! AACTGTAAAAATAATGAGTG+AGG - chr4_1:81004248-81004267 None:intergenic 25.0%
! TACTAACTTGACTACAAAAT+GGG - chr4_1:81004315-81004334 None:intergenic 25.0%
! TTACTAACTTGACTACAAAA+TGG - chr4_1:81004316-81004335 None:intergenic 25.0%
!! TTAGTAATTGTTGTTACACA+TGG + chr4_1:81004329-81004348 Msa0576880:intron 25.0%
!! CTCATTTTCCATCTATTTAA+TGG + chr4_1:81004896-81004915 Msa0576880:intron 25.0%
!! ATTTTCCATCTATTTAATGG+TGG + chr4_1:81004899-81004918 Msa0576880:intron 25.0%
! TCAACATAAAGTTTAAGAGA+TGG - chr4_1:81005018-81005037 None:intergenic 25.0%
! TTACTACTATAAATCACAGT+TGG - chr4_1:81005157-81005176 None:intergenic 25.0%
! AACAAAAACAATATACCTGT+CGG - chr4_1:81005254-81005273 None:intergenic 25.0%
!! AAGTTTTTGTATGTCATCAA+TGG - chr4_1:81005414-81005433 None:intergenic 25.0%
! ATTTATCAATTTACCTTGGT+TGG - chr4_1:81005719-81005738 None:intergenic 25.0%
! ATTGATAAATGTGCATTCTT+CGG + chr4_1:81005729-81005748 Msa0576880:intron 25.0%
! TAAAATGAAGGTAGGATATT+AGG - chr4_1:81005774-81005793 None:intergenic 25.0%
! ATTTATTTCAATGTGAGTGT+AGG + chr4_1:81005797-81005816 Msa0576880:intron 25.0%
! TTTATTTCAATGTGAGTGTA+GGG + chr4_1:81005798-81005817 Msa0576880:intron 25.0%
! ACTTACCTTATAGATTAACA+AGG - chr4_1:81006090-81006109 None:intergenic 25.0%
!! CATGGTAAAAGTATAAAACA+TGG - chr4_1:81006984-81007003 None:intergenic 25.0%
!! CATGTTTTATACTTTTACCA+TGG + chr4_1:81006982-81007001 Msa0576880:three_prime_UTR 25.0%
! TGGTGTATGTTAATATGTAA+AGG + chr4_1:81007065-81007084 Msa0576880:three_prime_UTR 25.0%
! TGTAACAAATGATTAAGTAG+GGG + chr4_1:81007156-81007175 Msa0576880:three_prime_UTR 25.0%
AACTAGAACCTAACCAAAAA+GGG + chr4_1:80995706-80995725 Msa0576880:five_prime_UTR 30.0%
CGAAGATAAAGATGAGTATA+TGG + chr4_1:80995956-80995975 Msa0576880:exon 30.0%
GACACAAGAGAATATAGATT+TGG - chr4_1:80996223-80996242 None:intergenic 30.0%
!! ATGGTTGAACTAAGTTTTAG+TGG - chr4_1:80996282-80996301 None:intergenic 30.0%
ACCATAAAGTGATTTCTGTT+CGG + chr4_1:80996297-80996316 Msa0576880:intron 30.0%
! TTAAGTTGTTGATCCAAACA+TGG - chr4_1:80996461-80996480 None:intergenic 30.0%
! TATTTTCCGCTTATTATCAC+AGG - chr4_1:80996587-80996606 None:intergenic 30.0%
TGTGATAATAAGCGGAAAAT+AGG + chr4_1:80996586-80996605 Msa0576880:intron 30.0%
ACTAATTGAAGCTTATCTAC+TGG - chr4_1:80996681-80996700 None:intergenic 30.0%
CATTAAGCACAAAACTGTAA+TGG - chr4_1:80996827-80996846 None:intergenic 30.0%
! TTTCTTTCTGCAGTCTATTT+TGG + chr4_1:80996938-80996957 Msa0576880:intron 30.0%
GTAGCAATTCTTCCATATAA+CGG - chr4_1:80996969-80996988 None:intergenic 30.0%
! GTTTTTATGATTCTCACATG+AGG - chr4_1:80997008-80997027 None:intergenic 30.0%
! TTCTCAAACTAAGGTATTTC+TGG + chr4_1:80997069-80997088 Msa0576880:intron 30.0%
!! ACAAGTTTTGTGTTCTTCAA+TGG + chr4_1:80997169-80997188 Msa0576880:CDS 30.0%
!! CAAGTTTTGTGTTCTTCAAT+GGG + chr4_1:80997170-80997189 Msa0576880:CDS 30.0%
TTATTCATATGCAGTCTGTA+AGG + chr4_1:80997416-80997435 Msa0576880:intron 30.0%
TATTCATATGCAGTCTGTAA+GGG + chr4_1:80997417-80997436 Msa0576880:intron 30.0%
GCGAGTAAAATATTACGTTT+AGG - chr4_1:80997715-80997734 None:intergenic 30.0%
TTACTCGCTCATTTATTTGT+TGG + chr4_1:80997727-80997746 Msa0576880:intron 30.0%
!!! TTTTTTTTCACTCTGCAGAT+TGG + chr4_1:80997952-80997971 Msa0576880:intron 30.0%
GTATTATAGATCCTGATTGT+AGG + chr4_1:80997974-80997993 Msa0576880:CDS 30.0%
TTTATCCTGTGAAAATGGAT+TGG + chr4_1:80998054-80998073 Msa0576880:intron 30.0%
AACATTAAAACCTGAGTCTA+TGG - chr4_1:80998085-80998104 None:intergenic 30.0%
GTTATTCCCTTTGACAATAA+AGG + chr4_1:80998148-80998167 Msa0576880:CDS 30.0%
! TCAAGGAAGCTTTTAATATC+AGG + chr4_1:80998176-80998195 Msa0576880:CDS 30.0%
!! TTTTGATTGTGTAGATGTAC+TGG + chr4_1:80998215-80998234 Msa0576880:intron 30.0%
ATCAAGTTTAGTAGAGGTTA+TGG + chr4_1:80998455-80998474 Msa0576880:intron 30.0%
TATGACAGATAACTGAAAAC+GGG - chr4_1:80998597-80998616 None:intergenic 30.0%
AACATGTATGTAGCATAACT+CGG + chr4_1:80998692-80998711 Msa0576880:intron 30.0%
!! TTTTATAACACGTCTTGTTG+AGG - chr4_1:80998795-80998814 None:intergenic 30.0%
AAAAACTGTATCATTCATGG+TGG + chr4_1:80998813-80998832 Msa0576880:intron 30.0%
TGGAATCGTTTATGGATTTA+TGG + chr4_1:80998833-80998852 Msa0576880:intron 30.0%
AAACTGAACTGTATTTCCAA+TGG - chr4_1:80998866-80998885 None:intergenic 30.0%
! TGAGATAATTGGTTAGTTAG+AGG + chr4_1:80999098-80999117 Msa0576880:intron 30.0%
GAGGAGACATATGTATAAAT+AGG + chr4_1:80999117-80999136 Msa0576880:intron 30.0%
AAAAGATAGAACCTTTGTGA+AGG + chr4_1:80999192-80999211 Msa0576880:intron 30.0%
TGTTTAACAACGTTAAAGAC+TGG - chr4_1:80999337-80999356 None:intergenic 30.0%
GATAGTGTCAAAAAAAAACC+TGG - chr4_1:80999541-80999560 None:intergenic 30.0%
! ACTATCTTACCTATCGTTTT+GGG + chr4_1:80999555-80999574 Msa0576880:intron 30.0%
AGAGACTATTTGATGAACTA+AGG - chr4_1:80999592-80999611 None:intergenic 30.0%
! TTTACCTTTCTCAACTCTTT+TGG + chr4_1:80999640-80999659 Msa0576880:intron 30.0%
! TTACCTTTCTCAACTCTTTT+GGG + chr4_1:80999641-80999660 Msa0576880:intron 30.0%
! CTATGAAGTGTTAGATTTCT+AGG - chr4_1:80999778-80999797 None:intergenic 30.0%
CTAGAAATCTAACACTTCAT+AGG + chr4_1:80999776-80999795 Msa0576880:intron 30.0%
AAATCTAACACTTCATAGGA+AGG + chr4_1:80999780-80999799 Msa0576880:intron 30.0%
AACGAAAGGAATTATTATCC+TGG - chr4_1:80999948-80999967 None:intergenic 30.0%
AACTGTAGAACTATGACATA+TGG - chr4_1:81000145-81000164 None:intergenic 30.0%
! TGTCATAGTTCTACAGTTTA+TGG + chr4_1:81000147-81000166 Msa0576880:intron 30.0%
! ATAGTTCTACAGTTTATGGT+TGG + chr4_1:81000151-81000170 Msa0576880:intron 30.0%
!!! CTCATATGTTTTAACATGAC+GGG - chr4_1:81000349-81000368 None:intergenic 30.0%
!!! CCTCATATGTTTTAACATGA+CGG - chr4_1:81000350-81000369 None:intergenic 30.0%
TCTCAAAACAGTCTTGATAA+TGG + chr4_1:81000408-81000427 Msa0576880:CDS 30.0%
! CTCAAAACAGTCTTGATAAT+GGG + chr4_1:81000409-81000428 Msa0576880:CDS 30.0%
!! TCAAAACAGTCTTGATAATG+GGG + chr4_1:81000410-81000429 Msa0576880:CDS 30.0%
! ATTTAACATACAGCTCTGAT+TGG - chr4_1:81000534-81000553 None:intergenic 30.0%
ATTCCATTTAAGTCACATTG+TGG + chr4_1:81000568-81000587 Msa0576880:intron 30.0%
AATCCACAATGTGACTTAAA+TGG - chr4_1:81000574-81000593 None:intergenic 30.0%
CGCAAAAATTTGTGACAAAT+TGG - chr4_1:81000618-81000637 None:intergenic 30.0%
! AATTGCCTGAAAAGTACATA+AGG - chr4_1:81000656-81000675 None:intergenic 30.0%
!! GATGGTTCTAGATATTTACT+TGG + chr4_1:81000703-81000722 Msa0576880:CDS 30.0%
TTGTTCTTTGTATTGTGCAT+TGG + chr4_1:81000822-81000841 Msa0576880:intron 30.0%
!!! CATTTATTTTGTAGGGTTAC+TGG + chr4_1:81000910-81000929 Msa0576880:intron 30.0%
! GATTTTGAATACAGCTCATA+AGG - chr4_1:81001186-81001205 None:intergenic 30.0%
ACAAAGCAAATGAAAAGAGA+AGG + chr4_1:81001404-81001423 Msa0576880:intron 30.0%
! AAATGTCAAGGTACTAAAGA+TGG + chr4_1:81001465-81001484 Msa0576880:intron 30.0%
ATCTACAAGACAATATAAGC+AGG + chr4_1:81001622-81001641 Msa0576880:intron 30.0%
AACTGCTAGATAGAGATTAA+GGG - chr4_1:81001654-81001673 None:intergenic 30.0%
TAACTGCTAGATAGAGATTA+AGG - chr4_1:81001655-81001674 None:intergenic 30.0%
TCTATCTAGCAGTTACAATA+TGG + chr4_1:81001660-81001679 Msa0576880:intron 30.0%
!! AAGACCTTCAAAGTGTTTTA+TGG + chr4_1:81001734-81001753 Msa0576880:intron 30.0%
TATGCCATAAAACACTTTGA+AGG - chr4_1:81001741-81001760 None:intergenic 30.0%
TTAATAGGTGTGTCTGAATA+TGG - chr4_1:81001787-81001806 None:intergenic 30.0%
! ACATAAGAACCTTTTGAATC+AGG - chr4_1:81001855-81001874 None:intergenic 30.0%
TGATTCAAAAGGTTCTTATG+TGG + chr4_1:81001854-81001873 Msa0576880:CDS 30.0%
! TTGGAAAGGTATGTCAATTT+GGG + chr4_1:81001882-81001901 Msa0576880:CDS 30.0%
CAGAGAGACAATAAAAAAGA+GGG - chr4_1:81002040-81002059 None:intergenic 30.0%
ACAGAGAGACAATAAAAAAG+AGG - chr4_1:81002041-81002060 None:intergenic 30.0%
!!! CTTTTTTATTGTCTCTCTGT+CGG + chr4_1:81002041-81002060 Msa0576880:intron 30.0%
!! TTTTTCTTTTGGTTGAGTCT+TGG - chr4_1:81002077-81002096 None:intergenic 30.0%
! CAGATGCATTCATTTTATGT+AGG + chr4_1:81002151-81002170 Msa0576880:intron 30.0%
CACTTATAAAACTTACAACC+AGG - chr4_1:81002250-81002269 None:intergenic 30.0%
AATATTAGCAATGAATCTCG+AGG + chr4_1:81002277-81002296 Msa0576880:CDS 30.0%
CTAAGAAATAAATCCTGTCT+TGG - chr4_1:81002747-81002766 None:intergenic 30.0%
AAAGAAAAGTGACAGCAAAA+TGG - chr4_1:81002846-81002865 None:intergenic 30.0%
AAACTAAACTTTATCCCACT+CGG - chr4_1:81002927-81002946 None:intergenic 30.0%
CACACATTTCTTCAAAACTT+TGG - chr4_1:81003082-81003101 None:intergenic 30.0%
!!! CAAAGTTTTGAAGAAATGTG+TGG + chr4_1:81003080-81003099 Msa0576880:intron 30.0%
! TTAAGTTTTGCATTCTCCTT+TGG + chr4_1:81003129-81003148 Msa0576880:intron 30.0%
ATCTAATAAACCAACCTAAC+AGG + chr4_1:81003260-81003279 Msa0576880:intron 30.0%
ACATTTACTGAATAGTCTGA+CGG - chr4_1:81003351-81003370 None:intergenic 30.0%
! AAAGTATCCAAATCAAACCT+GGG - chr4_1:81003391-81003410 None:intergenic 30.0%
! TAAAGTATCCAAATCAAACC+TGG - chr4_1:81003392-81003411 None:intergenic 30.0%
!! ATGGTTTGCTAATTGAAATG+TGG + chr4_1:81003448-81003467 Msa0576880:intron 30.0%
! ACACTAGTTCAATTTTTCTC+AGG - chr4_1:81003753-81003772 None:intergenic 30.0%
!!! AACAGTTGTCACTAGTTTTT+CGG + chr4_1:81003779-81003798 Msa0576880:intron 30.0%
! TTTTCATCACTAGAAGACTT+AGG + chr4_1:81004023-81004042 Msa0576880:intron 30.0%
TTTCATCACTAGAAGACTTA+GGG + chr4_1:81004024-81004043 Msa0576880:intron 30.0%
TTATTTATTTGTGGGATGCT+CGG + chr4_1:81004057-81004076 Msa0576880:intron 30.0%
!! CGGAAAAGTATTTAAGTGAT+TGG + chr4_1:81004077-81004096 Msa0576880:intron 30.0%
TCTCCCTTAAAAATAAAAGC+TGG - chr4_1:81004121-81004140 None:intergenic 30.0%
!! ATTGGTATTAGAGCTAGTTT+TGG + chr4_1:81004168-81004187 Msa0576880:intron 30.0%
! AGGAAAATTTTGAGCATGAT+AGG - chr4_1:81004202-81004221 None:intergenic 30.0%
GGAATAGTAAAATGCAACAA+TGG - chr4_1:81004288-81004307 None:intergenic 30.0%
ACAAAATAACTGAGTAGAAG+CGG - chr4_1:81004678-81004697 None:intergenic 30.0%
!! TTAACATATGTTGGTAGTTG+TGG + chr4_1:81004778-81004797 Msa0576880:intron 30.0%
!! TAACATATGTTGGTAGTTGT+GGG + chr4_1:81004779-81004798 Msa0576880:intron 30.0%
AAGATATCTGGAGAACAAAA+TGG - chr4_1:81004970-81004989 None:intergenic 30.0%
AAATACATGGGTAGTATTCT+TGG - chr4_1:81005119-81005138 None:intergenic 30.0%
ACAAAAACAATATACCTGTC+GGG - chr4_1:81005253-81005272 None:intergenic 30.0%
TTGAGTACCATTCTGAATAA+CGG - chr4_1:81005331-81005350 None:intergenic 30.0%
ACTGTTAAAGTCGTTAACAT+TGG - chr4_1:81005354-81005373 None:intergenic 30.0%
AATAACGTGTATTACTGTGT+TGG + chr4_1:81005662-81005681 Msa0576880:CDS 30.0%
GCACATTTATCAATTTACCT+TGG - chr4_1:81005723-81005742 None:intergenic 30.0%
! AGAGGAGATTTTATTGTAGT+CGG + chr4_1:81006044-81006063 Msa0576880:CDS 30.0%
CTTATAGATTAACAAGGAGA+TGG - chr4_1:81006084-81006103 None:intergenic 30.0%
CATCTCCTTGTTAATCTATA+AGG + chr4_1:81006082-81006101 Msa0576880:CDS 30.0%
CTATAAGAGAGGAAAGAAAA+AGG - chr4_1:81006181-81006200 None:intergenic 30.0%
TATTGTCATGTCTATAAGAG+AGG - chr4_1:81006192-81006211 None:intergenic 30.0%
ATAGACATGACAATACTTTC+TGG + chr4_1:81006197-81006216 Msa0576880:intron 30.0%
! GGATGGATACATTAATTTTC+TGG + chr4_1:81006218-81006237 Msa0576880:intron 30.0%
!!! CTTTTCATTGTTTTAGCATG+AGG + chr4_1:81006283-81006302 Msa0576880:intron 30.0%
CAAATATAACAGTTGGAATC+TGG - chr4_1:81006559-81006578 None:intergenic 30.0%
CAGATTCCAACTGTTATATT+TGG + chr4_1:81006557-81006576 Msa0576880:CDS 30.0%
GTTATATTTGGCACCATTAA+TGG + chr4_1:81006569-81006588 Msa0576880:CDS 30.0%
AACAAAAGAAGCTTCAAATG+AGG - chr4_1:81006890-81006909 None:intergenic 30.0%
!!! TTCTTTTTTGTGCGTTTGTT+GGG + chr4_1:81006943-81006962 Msa0576880:three_prime_UTR 30.0%
ATTTGACAATGGATCACAAA+TGG + chr4_1:81007045-81007064 Msa0576880:three_prime_UTR 30.0%
GAACTAGAACCTAACCAAAA+AGG + chr4_1:80995705-80995724 Msa0576880:five_prime_UTR 35.0%
!!! GAATTTGACCCTTTTTGGTT+AGG - chr4_1:80995717-80995736 None:intergenic 35.0%
!! AAGGGTGGTTTGATTTGATT+GGG - chr4_1:80995803-80995822 None:intergenic 35.0%
CGATTGATTGATTGAGTGAA+GGG - chr4_1:80995821-80995840 None:intergenic 35.0%
TCGATTGATTGATTGAGTGA+AGG - chr4_1:80995822-80995841 None:intergenic 35.0%
TCTTTCACTTCTCACAACTA+CGG - chr4_1:80995863-80995882 None:intergenic 35.0%
TTACAGTGAGAAATGCGATA+GGG - chr4_1:80995899-80995918 None:intergenic 35.0%
TTTACAGTGAGAAATGCGAT+AGG - chr4_1:80995900-80995919 None:intergenic 35.0%
ACCGAACAGAAATCACTTTA+TGG - chr4_1:80996301-80996320 None:intergenic 35.0%
ATAGGTTATTAACGTGTCAC+AGG + chr4_1:80996604-80996623 Msa0576880:intron 35.0%
!! ATTTTGGATGTGCCGTTATA+TGG + chr4_1:80996954-80996973 Msa0576880:CDS 35.0%
ACTTGTTTGTGTCTCAAACA+GGG + chr4_1:80997108-80997127 Msa0576880:intron 35.0%
ATTGTTGATGTAGTGTAGCA+AGG + chr4_1:80997281-80997300 Msa0576880:intron 35.0%
CAGCTGTGGTTAATATCATA+TGG + chr4_1:80997317-80997336 Msa0576880:intron 35.0%
!!! TTTGCGAGTTGATTTTTGGA+GGG + chr4_1:80997444-80997463 Msa0576880:intron 35.0%
CGATCAGAAACGTCTAATTA+TGG - chr4_1:80997662-80997681 None:intergenic 35.0%
! ACATCAATGCTTGATAGTCT+AGG + chr4_1:80997893-80997912 Msa0576880:intron 35.0%
TAAACAAACCGTCATACAAG+TGG - chr4_1:80998011-80998030 None:intergenic 35.0%
! CTTGTATGACGGTTTGTTTA+AGG + chr4_1:80998011-80998030 Msa0576880:CDS 35.0%
! TCATTCCAATCCATTTTCAC+AGG - chr4_1:80998062-80998081 None:intergenic 35.0%
ATTACACGTTCATTGATGTC+AGG + chr4_1:80998126-80998145 Msa0576880:intron 35.0%
AGCTGTCCTTTATTGTCAAA+GGG - chr4_1:80998157-80998176 None:intergenic 35.0%
CCAACATGACATAAGTTCAA+AGG - chr4_1:80998351-80998370 None:intergenic 35.0%
CCTTTGAACTTATGTCATGT+TGG + chr4_1:80998348-80998367 Msa0576880:intron 35.0%
! ATTCATGGTGGAATCGTTTA+TGG + chr4_1:80998825-80998844 Msa0576880:intron 35.0%
CTCGATAGGCAATAAAAATG+AGG - chr4_1:80999243-80999262 None:intergenic 35.0%
TTCTGGGTCATAACTCATAA+CGG + chr4_1:80999301-80999320 Msa0576880:intron 35.0%
! CACTATCTTACCTATCGTTT+TGG + chr4_1:80999554-80999573 Msa0576880:intron 35.0%
! CTATCTTACCTATCGTTTTG+GGG + chr4_1:80999556-80999575 Msa0576880:intron 35.0%
! TATCTTACCTATCGTTTTGG+GGG + chr4_1:80999557-80999576 Msa0576880:intron 35.0%
AGGTAAAGCAAAGAAGCAAA+AGG - chr4_1:80999627-80999646 None:intergenic 35.0%
!! GTTTTGTTCTTCAAATGCGT+TGG + chr4_1:80999731-80999750 Msa0576880:intron 35.0%
TTATGGCAGTATGTGTTCAA+AGG + chr4_1:80999813-80999832 Msa0576880:intron 35.0%
AGCAGTAACTAAAAAGGATC+AGG + chr4_1:81000040-81000059 Msa0576880:intron 35.0%
CCGTCATGTTAAAACATATG+AGG + chr4_1:81000347-81000366 Msa0576880:CDS 35.0%
AACATATGAGGTTGCTCTTA+AGG + chr4_1:81000359-81000378 Msa0576880:CDS 35.0%
ATTAGCACTGCAGTATACTA+TGG - chr4_1:81000496-81000515 None:intergenic 35.0%
ATAGTATACTGCAGTGCTAA+TGG + chr4_1:81000495-81000514 Msa0576880:CDS 35.0%
! TATTTACTTGGTGACCATAC+AGG + chr4_1:81000715-81000734 Msa0576880:CDS 35.0%
! ATTTACTTGGTGACCATACA+GGG + chr4_1:81000716-81000735 Msa0576880:CDS 35.0%
GTATGAAATCGTAGATGCAA+TGG - chr4_1:81000965-81000984 None:intergenic 35.0%
!! GTCTATATTGGTTCAAGCTA+TGG + chr4_1:81001000-81001019 Msa0576880:CDS 35.0%
! ATGGAGTCTGTATCTTTTGT+TGG + chr4_1:81001153-81001172 Msa0576880:intron 35.0%
! TGGAGTCTGTATCTTTTGTT+GGG + chr4_1:81001154-81001173 Msa0576880:intron 35.0%
!! CAAACAGAGTTTTGGTAAAC+TGG + chr4_1:81001283-81001302 Msa0576880:intron 35.0%
CATTTGCTTTGTCTTGAAGT+TGG - chr4_1:81001396-81001415 None:intergenic 35.0%
! ACTTTGAAGGTCTTAAAAGC+AGG - chr4_1:81001728-81001747 None:intergenic 35.0%
AATCTTCAGCCTGATTCAAA+AGG + chr4_1:81001843-81001862 Msa0576880:CDS 35.0%
! CTTGGAAAGGTATGTCAATT+TGG + chr4_1:81001881-81001900 Msa0576880:CDS 35.0%
! TGGAAAGGTATGTCAATTTG+GGG + chr4_1:81001883-81001902 Msa0576880:CDS 35.0%
TGGAATAGGTATCAATGAAC+AGG + chr4_1:81002010-81002029 Msa0576880:CDS 35.0%
! GTAGAACTTCAAGGTATCAA+AGG + chr4_1:81002179-81002198 Msa0576880:CDS 35.0%
! TTCAAGGTATCAAAGGAATG+TGG + chr4_1:81002186-81002205 Msa0576880:CDS 35.0%
CACAATCAACTTGTACAAGT+AGG + chr4_1:81002371-81002390 Msa0576880:intron 35.0%
ATGCCATTAACAGTTCGAAA+GGG - chr4_1:81002639-81002658 None:intergenic 35.0%
TAATGGCATGTTCAATCTTC+TGG + chr4_1:81002650-81002669 Msa0576880:intron 35.0%
TTCATATCTTTACCCAAGAC+AGG + chr4_1:81002731-81002750 Msa0576880:intron 35.0%
CAGTCATAGATAAACTCCAA+AGG - chr4_1:81003148-81003167 None:intergenic 35.0%
GCATATCATGATATTCCCAT+GGG - chr4_1:81003530-81003549 None:intergenic 35.0%
!!! ACAGTTGTCACTAGTTTTTC+GGG + chr4_1:81003780-81003799 Msa0576880:intron 35.0%
ACAACGATTATGTCTTCTCT+AGG + chr4_1:81003814-81003833 Msa0576880:intron 35.0%
CAACGATTATGTCTTCTCTA+GGG + chr4_1:81003815-81003834 Msa0576880:intron 35.0%
AACGATTATGTCTTCTCTAG+GGG + chr4_1:81003816-81003835 Msa0576880:intron 35.0%
GTAAAAAGGAAGATTCGTAG+AGG + chr4_1:81003838-81003857 Msa0576880:intron 35.0%
! TATTCTAGGGAACTAACCTT+TGG - chr4_1:81003965-81003984 None:intergenic 35.0%
! GTGAGGCAAATTGACTTAAA+TGG - chr4_1:81004231-81004250 None:intergenic 35.0%
ATATACCATCTCCAATTTCG+AGG - chr4_1:81004396-81004415 None:intergenic 35.0%
TGAGATTTCATACTCCAGTT+GGG - chr4_1:81004437-81004456 None:intergenic 35.0%
ATGAGATTTCATACTCCAGT+TGG - chr4_1:81004438-81004457 None:intergenic 35.0%
! TGATTGGGATTTTCACCAAT+GGG - chr4_1:81004475-81004494 None:intergenic 35.0%
TTTGTGATGAGATTAAGGTC+AGG - chr4_1:81004556-81004575 None:intergenic 35.0%
TGACCTTAATCTCATCACAA+AGG + chr4_1:81004555-81004574 Msa0576880:CDS 35.0%
TTCTTCTTTGTGCGTTTGAA+GGG + chr4_1:81004611-81004630 Msa0576880:CDS 35.0%
CAAAATAACTGAGTAGAAGC+GGG - chr4_1:81004677-81004696 None:intergenic 35.0%
AGCAACCACCATTAAATAGA+TGG - chr4_1:81004907-81004926 None:intergenic 35.0%
CACATAGCAAGTAAGATATC+TGG - chr4_1:81004982-81005001 None:intergenic 35.0%
CTTTATGTTGAACACAAGCA+CGG + chr4_1:81005027-81005046 Msa0576880:CDS 35.0%
TTTATGTTGAACACAAGCAC+GGG + chr4_1:81005028-81005047 Msa0576880:CDS 35.0%
CGAGTTAACAGATAGGAAAA+AGG + chr4_1:81005051-81005070 Msa0576880:CDS 35.0%
GAACACAACCTATTACTCTA+CGG + chr4_1:81005083-81005102 Msa0576880:CDS 35.0%
TACTATAAATCACAGTTGGC+CGG - chr4_1:81005153-81005172 None:intergenic 35.0%
GCAAAATCCGTTATTCAGAA+TGG + chr4_1:81005321-81005340 Msa0576880:intron 35.0%
AGTTTAGCGATTGCAAAAGA+AGG + chr4_1:81005371-81005390 Msa0576880:intron 35.0%
AAAGAAGGTGAGCTTACTAT+TGG + chr4_1:81005386-81005405 Msa0576880:CDS 35.0%
TCATATTCGCACTATTCCAT+TGG + chr4_1:81005433-81005452 Msa0576880:CDS 35.0%
CATATTCGCACTATTCCATT+GGG + chr4_1:81005434-81005453 Msa0576880:CDS 35.0%
ATATTCGCACTATTCCATTG+GGG + chr4_1:81005435-81005454 Msa0576880:CDS 35.0%
!!! CCAGACTTTTGACTTCATAT+CGG + chr4_1:81005577-81005596 Msa0576880:CDS 35.0%
CCATATTCATAAGTGTCAAG+TGG - chr4_1:81005608-81005627 None:intergenic 35.0%
CCACTTGACACTTATGAATA+TGG + chr4_1:81005605-81005624 Msa0576880:CDS 35.0%
CACGTTATTATCATCTGAGA+AGG - chr4_1:81005651-81005670 None:intergenic 35.0%
!!! TCTCGTTTTTTCTGTTGAAG+AGG + chr4_1:81005827-81005846 Msa0576880:CDS 35.0%
!!! CTCGTTTTTTCTGTTGAAGA+GGG + chr4_1:81005828-81005847 Msa0576880:CDS 35.0%
!!! TCGTTTTTTCTGTTGAAGAG+GGG + chr4_1:81005829-81005848 Msa0576880:CDS 35.0%
AAAAGATTCAGCTGTACAAG+TGG + chr4_1:81005940-81005959 Msa0576880:CDS 35.0%
AAAGATTCAGCTGTACAAGT+GGG + chr4_1:81005941-81005960 Msa0576880:CDS 35.0%
GCTTTATATGTGCAAACTAG+AGG + chr4_1:81006026-81006045 Msa0576880:CDS 35.0%
GAAAAAGGAAATGGTAACCT+TGG - chr4_1:81006166-81006185 None:intergenic 35.0%
GAGAGGAAAGAAAAAGGAAA+TGG - chr4_1:81006175-81006194 None:intergenic 35.0%
ACATGACAATACTTTCTGGA+TGG + chr4_1:81006201-81006220 Msa0576880:intron 35.0%
!!! TCATTGTTTTAGCATGAGGA+AGG + chr4_1:81006287-81006306 Msa0576880:intron 35.0%
ACTGTTCGAAAAAATAGCGA+AGG + chr4_1:81006416-81006435 Msa0576880:CDS 35.0%
ACCTTGGAGAGTTTATCAAT+CGG + chr4_1:81006486-81006505 Msa0576880:CDS 35.0%
! GAGAGTTTATCAATCGGTTT+CGG + chr4_1:81006492-81006511 Msa0576880:CDS 35.0%
! ATGGTGCCAAATATAACAGT+TGG - chr4_1:81006566-81006585 None:intergenic 35.0%
!! GCACCATTAATGGTGTTATT+GGG + chr4_1:81006579-81006598 Msa0576880:CDS 35.0%
!! CACCATTAATGGTGTTATTG+GGG + chr4_1:81006580-81006599 Msa0576880:CDS 35.0%
TACCCCAATAACACCATTAA+TGG - chr4_1:81006585-81006604 None:intergenic 35.0%
AAGAATACATACTGCTCATG+AGG - chr4_1:81006620-81006639 None:intergenic 35.0%
AACTTGAGGAAGGTGATTAA+AGG + chr4_1:81006656-81006675 Msa0576880:CDS 35.0%
! TGTAGAAGCCAGAAACTTTT+TGG + chr4_1:81006733-81006752 Msa0576880:CDS 35.0%
! AAGCCAGAAACTTTTTGGAT+GGG + chr4_1:81006738-81006757 Msa0576880:CDS 35.0%
TAAGATGGATGAGATTTCCA+AGG + chr4_1:81006796-81006815 Msa0576880:CDS 35.0%
!!! CTTCTTTTTTGTGCGTTTGT+TGG + chr4_1:81006942-81006961 Msa0576880:three_prime_UTR 35.0%
!!! TCTTTTTTGTGCGTTTGTTG+GGG + chr4_1:81006944-81006963 Msa0576880:three_prime_UTR 35.0%
! GAATGGTTTGCATTTGACAA+TGG + chr4_1:81007034-81007053 Msa0576880:three_prime_UTR 35.0%
AACTGTAATACGTAACTGAC+AGG - chr4_1:81007133-81007152 None:intergenic 35.0%
AAGAAATCAGATGGTCGAAT+CGG + chr4_1:81007180-81007199 Msa0576880:three_prime_UTR 35.0%
ACCAAAAAGGGTCAAATTCG+AGG + chr4_1:80995718-80995737 Msa0576880:five_prime_UTR 40.0%
! TCCTCGAATTTGACCCTTTT+TGG - chr4_1:80995722-80995741 None:intergenic 40.0%
AAAAAGGGTCAAATTCGAGG+AGG + chr4_1:80995721-80995740 Msa0576880:five_prime_UTR 40.0%
AAAAGGGTCAAATTCGAGGA+GGG + chr4_1:80995722-80995741 Msa0576880:five_prime_UTR 40.0%
TAGAAGTGAAAGTGAGAGAG+TGG + chr4_1:80995757-80995776 Msa0576880:five_prime_UTR 40.0%
!! GAAGGGTGGTTTGATTTGAT+TGG - chr4_1:80995804-80995823 None:intergenic 40.0%
TTGATTGATTGAGTGAAGGG+TGG - chr4_1:80995818-80995837 None:intergenic 40.0%
TCTCTTCGAACAGTTTCTCT+CGG - chr4_1:80995933-80995952 None:intergenic 40.0%
TAAAAGAGAGAGAGGGAAAG+AGG - chr4_1:80996084-80996103 None:intergenic 40.0%
! TCTTTCCCTCTCTCTCTTTT+AGG + chr4_1:80996083-80996102 Msa0576880:intron 40.0%
! CTTTCCCTCTCTCTCTTTTA+GGG + chr4_1:80996084-80996103 Msa0576880:intron 40.0%
AGAACCCTAAAAGAGAGAGA+GGG - chr4_1:80996091-80996110 None:intergenic 40.0%
AAGAACCCTAAAAGAGAGAG+AGG - chr4_1:80996092-80996111 None:intergenic 40.0%
ATTCACTTGCTTACTGCTCA+GGG + chr4_1:80996181-80996200 Msa0576880:CDS 40.0%
!! TCTAGCTTTAAGGCCATGTT+TGG + chr4_1:80996445-80996464 Msa0576880:intron 40.0%
TGAGAGCCTGTGATAATAAG+CGG + chr4_1:80996578-80996597 Msa0576880:intron 40.0%
GAAGCTTATCTACTGGCATA+AGG - chr4_1:80996674-80996693 None:intergenic 40.0%
! CTGTTTGAGACACAAACAAG+TGG - chr4_1:80997109-80997128 None:intergenic 40.0%
CACTTGTTTGTGTCTCAAAC+AGG + chr4_1:80997107-80997126 Msa0576880:intron 40.0%
TGTAACAAGCTCGGATTTCT+CGG - chr4_1:80997199-80997218 None:intergenic 40.0%
!! AGAAATCCGAGCTTGTTACA+CGG + chr4_1:80997199-80997218 Msa0576880:CDS 40.0%
TGAATACCGTGTAACAAGCT+CGG - chr4_1:80997208-80997227 None:intergenic 40.0%
!!! CGTGTTTGCGAGTTGATTTT+TGG + chr4_1:80997440-80997459 Msa0576880:intron 40.0%
!!! GTTTGCGAGTTGATTTTTGG+AGG + chr4_1:80997443-80997462 Msa0576880:intron 40.0%
ATTTCTGCCATCCAGATCAA+TGG + chr4_1:80997762-80997781 Msa0576880:intron 40.0%
TTTCTGCCATCCAGATCAAT+GGG + chr4_1:80997763-80997782 Msa0576880:intron 40.0%
TGATCGTATAGGAAGACCAA+CGG + chr4_1:80997795-80997814 Msa0576880:CDS 40.0%
ATAGGAAGACCAACGGATAA+TGG + chr4_1:80997802-80997821 Msa0576880:CDS 40.0%
AATACCTGACCATTATCCGT+TGG - chr4_1:80997814-80997833 None:intergenic 40.0%
CACTTCTAATCAACCTTGAG+TGG + chr4_1:80997844-80997863 Msa0576880:intron 40.0%
!! GATCCTGATTGTAGGTTGAT+TGG + chr4_1:80997982-80998001 Msa0576880:CDS 40.0%
AGTCCAATCAACCTACAATC+AGG - chr4_1:80997988-80998007 None:intergenic 40.0%
ATTGGACTCCACTTGTATGA+CGG + chr4_1:80998000-80998019 Msa0576880:CDS 40.0%
ATTGGAATGACCATAGACTC+AGG + chr4_1:80998072-80998091 Msa0576880:intron 40.0%
GAGCTGTCCTTTATTGTCAA+AGG - chr4_1:80998158-80998177 None:intergenic 40.0%
TGACAATAAAGGACAGCTCA+AGG + chr4_1:80998159-80998178 Msa0576880:CDS 40.0%
TTAAAAGCCAACCTTCCTAC+CGG + chr4_1:80998480-80998499 Msa0576880:intron 40.0%
AGGTATCTCAACCATCTAAC+CGG - chr4_1:80998502-80998521 None:intergenic 40.0%
ATGTAGCATAACTCGGTCAA+TGG + chr4_1:80998699-80998718 Msa0576880:intron 40.0%
GGGGAGCAAAAATAAACCTA+GGG - chr4_1:80998937-80998956 None:intergenic 40.0%
!!! CTAGGTTTATTTTTGCTCCC+CGG + chr4_1:80998936-80998955 Msa0576880:intron 40.0%
TTTGTGAAGGAGAAACCCTT+GGG + chr4_1:80999205-80999224 Msa0576880:intron 40.0%
!!! TCTCTTTGTTTTCAGGCTTG+AGG + chr4_1:80999451-80999470 Msa0576880:intron 40.0%
TGGTAAAGAACCACGATAGT+TGG - chr4_1:80999521-80999540 None:intergenic 40.0%
AACTATCGTGGTTCTTTACC+AGG + chr4_1:80999520-80999539 Msa0576880:CDS 40.0%
CTAATATCCCCCAAAACGAT+AGG - chr4_1:80999567-80999586 None:intergenic 40.0%
CAACCCAAAAGAGTTGAGAA+AGG - chr4_1:80999647-80999666 None:intergenic 40.0%
!! CTTTCTCAACTCTTTTGGGT+TGG + chr4_1:80999645-80999664 Msa0576880:intron 40.0%
!!! ACTCTTTTGGGTTGGATAGA+AGG + chr4_1:80999653-80999672 Msa0576880:intron 40.0%
!!! TTTTGGGTTGGATAGAAGGA+GGG + chr4_1:80999657-80999676 Msa0576880:intron 40.0%
CTTGTAGCAAGCATTAAACC+AGG + chr4_1:80999927-80999946 Msa0576880:intron 40.0%
!!! CAAGACTGTTTTGAGACCAT+GGG - chr4_1:81000404-81000423 None:intergenic 40.0%
!!! TCAAGACTGTTTTGAGACCA+TGG - chr4_1:81000405-81000424 None:intergenic 40.0%
! TGGGGCTGATTTATTGATAC+CGG + chr4_1:81000428-81000447 Msa0576880:CDS 40.0%
ATAATAAGCACACCACAGAG+TGG - chr4_1:81000462-81000481 None:intergenic 40.0%
CTCTGTGGTGTGCTTATTAT+TGG + chr4_1:81000462-81000481 Msa0576880:CDS 40.0%
CAGGCAATTACAAAAGCCTA+TGG + chr4_1:81000667-81000686 Msa0576880:intron 40.0%
! TGCGTACTTTTCTTTCTCGT+GGG - chr4_1:81000764-81000783 None:intergenic 40.0%
! TTGCGTACTTTTCTTTCTCG+TGG - chr4_1:81000765-81000784 None:intergenic 40.0%
TTCAAGCTATGGAGATTCAC+AGG + chr4_1:81001011-81001030 Msa0576880:CDS 40.0%
ACGTTCAAAACTAGTGCTTC+GGG - chr4_1:81001130-81001149 None:intergenic 40.0%
GACGTTCAAAACTAGTGCTT+CGG - chr4_1:81001131-81001150 None:intergenic 40.0%
! AATCAGTACTTCTGAGAGTC+TGG - chr4_1:81001208-81001227 None:intergenic 40.0%
! AAGGCTGACAAACAGAGTTT+TGG + chr4_1:81001275-81001294 Msa0576880:intron 40.0%
AAATGCTAACATGTGCCCTA+AGG + chr4_1:81001440-81001459 Msa0576880:intron 40.0%
AATGCTAACATGTGCCCTAA+GGG + chr4_1:81001441-81001460 Msa0576880:intron 40.0%
TACCTTGACATTTGCCCTTA+GGG - chr4_1:81001458-81001477 None:intergenic 40.0%
AAACCTTATCTTGTGCCCTT+AGG + chr4_1:81001570-81001589 Msa0576880:intron 40.0%
AACCTTATCTTGTGCCCTTA+GGG + chr4_1:81001571-81001590 Msa0576880:intron 40.0%
ATGCTAACATGTTGCCCTAA+GGG - chr4_1:81001588-81001607 None:intergenic 40.0%
AGGTTCTTATGTGGAAGTCT+TGG + chr4_1:81001863-81001882 Msa0576880:CDS 40.0%
CTTATGTGGAAGTCTTGGAA+AGG + chr4_1:81001868-81001887 Msa0576880:CDS 40.0%
ACCACACAGAAGTCAACAAT+GGG - chr4_1:81001909-81001928 None:intergenic 40.0%
TACCACACAGAAGTCAACAA+TGG - chr4_1:81001910-81001929 None:intergenic 40.0%
TCCATTACGAACAACACGTA+GGG - chr4_1:81001994-81002013 None:intergenic 40.0%
TTCCATTACGAACAACACGT+AGG - chr4_1:81001995-81002014 None:intergenic 40.0%
! CGTGTTGTTCGTAATGGAAT+AGG + chr4_1:81001996-81002015 Msa0576880:CDS 40.0%
TAGGCATCAGTAGAACTTCA+AGG + chr4_1:81002170-81002189 Msa0576880:intron 40.0%
GTCAAAAGGATCATCTGTTG+AGG - chr4_1:81002222-81002241 None:intergenic 40.0%
! TGATCCTTTTGACACTTTCC+TGG + chr4_1:81002229-81002248 Msa0576880:CDS 40.0%
!! ACAACCAGGAAAGTGTCAAA+AGG - chr4_1:81002236-81002255 None:intergenic 40.0%
CTGGAAGAAACTGAGATTGA+GGG + chr4_1:81002305-81002324 Msa0576880:CDS 40.0%
GTTGATTGTGAACTGCATCA+TGG - chr4_1:81002361-81002380 None:intergenic 40.0%
TACCCCTTTCGAACTGTTAA+TGG + chr4_1:81002633-81002652 Msa0576880:intron 40.0%
TGCCATTAACAGTTCGAAAG+GGG - chr4_1:81002638-81002657 None:intergenic 40.0%
CATGCCATTAACAGTTCGAA+AGG - chr4_1:81002640-81002659 None:intergenic 40.0%
TAAACTTTATCCCACTCGGT+GGG - chr4_1:81002923-81002942 None:intergenic 40.0%
! TTTGAAGTGACCTGTTAGGT+TGG - chr4_1:81003273-81003292 None:intergenic 40.0%
! AGAGTTTGAAGTGACCTGTT+AGG - chr4_1:81003277-81003296 None:intergenic 40.0%
AAATCAAACCTGGGTTGCAT+TGG - chr4_1:81003382-81003401 None:intergenic 40.0%
AATGCAACCCAGGTTTGATT+TGG + chr4_1:81003381-81003400 Msa0576880:intron 40.0%
!! AAGTGCTGATGTTGTTTGCA+TGG + chr4_1:81003429-81003448 Msa0576880:intron 40.0%
ATATTCCCATGGGAAAGAGA+TGG - chr4_1:81003520-81003539 None:intergenic 40.0%
GGCATATCATGATATTCCCA+TGG - chr4_1:81003531-81003550 None:intergenic 40.0%
CATGATATGCCTTAGCTGTA+AGG + chr4_1:81003540-81003559 Msa0576880:intron 40.0%
TGTCAACATCCTTACAGCTA+AGG - chr4_1:81003552-81003571 None:intergenic 40.0%
AATGCTAATAGCTGCTACCT+TGG + chr4_1:81003696-81003715 Msa0576880:intron 40.0%
ATGCTAATAGCTGCTACCTT+GGG + chr4_1:81003697-81003716 Msa0576880:intron 40.0%
! TGTCTTCTCTAGGGGTAAAA+AGG + chr4_1:81003824-81003843 Msa0576880:intron 40.0%
TGAGTGTTAGATTGGTGTGA+AGG + chr4_1:81003875-81003894 Msa0576880:intron 40.0%
CTTGACTACAAAATGGGTGT+TGG - chr4_1:81004309-81004328 None:intergenic 40.0%
! TTGTTGTTACACATGGAGAC+AGG + chr4_1:81004336-81004355 Msa0576880:intron 40.0%
CACTTGGTTTACCTCGAAAT+TGG + chr4_1:81004382-81004401 Msa0576880:CDS 40.0%
GTTTACCTCGAAATTGGAGA+TGG + chr4_1:81004388-81004407 Msa0576880:CDS 40.0%
TGCCTAGACATTAATCCCAT+TGG + chr4_1:81004457-81004476 Msa0576880:CDS 40.0%
CACCAATGGGATTAATGTCT+AGG - chr4_1:81004462-81004481 None:intergenic 40.0%
! CTGATTGGGATTTTCACCAA+TGG - chr4_1:81004476-81004495 None:intergenic 40.0%
GCTCCTTTGTGATGAGATTA+AGG - chr4_1:81004561-81004580 None:intergenic 40.0%
!! CTCATCACAAAGGAGCATTT+AGG + chr4_1:81004565-81004584 Msa0576880:CDS 40.0%
!! ATCACAAAGGAGCATTTAGG+AGG + chr4_1:81004568-81004587 Msa0576880:CDS 40.0%
GTTCTTCTTTGTGCGTTTGA+AGG + chr4_1:81004610-81004629 Msa0576880:CDS 40.0%
TCTTCTTTGTGCGTTTGAAG+GGG + chr4_1:81004612-81004631 Msa0576880:CDS 40.0%
GGAAAATGAGAATGCAAGCT+TGG - chr4_1:81004886-81004905 None:intergenic 40.0%
GATAGGAAAAAGGTCTCTCT+TGG + chr4_1:81005061-81005080 Msa0576880:CDS 40.0%
GAGAAAGTCCGTAGAGTAAT+AGG - chr4_1:81005094-81005113 None:intergenic 40.0%
GTCAGATGCAGCAAATACAT+GGG - chr4_1:81005131-81005150 None:intergenic 40.0%
! ATGTATTTGCTGCATCTGAC+CGG + chr4_1:81005131-81005150 Msa0576880:CDS 40.0%
ACAACGATAGGGGATAAATG+TGG - chr4_1:81005280-81005299 None:intergenic 40.0%
! TTATCCCCTATCGTTGTTTC+TGG + chr4_1:81005283-81005302 Msa0576880:intron 40.0%
!! TATCCCCTATCGTTGTTTCT+GGG + chr4_1:81005284-81005303 Msa0576880:intron 40.0%
AAGACCCAGAAACAACGATA+GGG - chr4_1:81005291-81005310 None:intergenic 40.0%
TATTCGCACTATTCCATTGG+GGG + chr4_1:81005436-81005455 Msa0576880:CDS 40.0%
CCGATATGAAGTCAAAAGTC+TGG - chr4_1:81005580-81005599 None:intergenic 40.0%
TGAGGAAAATGAACCAACCA+AGG + chr4_1:81005703-81005722 Msa0576880:CDS 40.0%
TTTCAATGTGAGTGTAGGGA+AGG + chr4_1:81005802-81005821 Msa0576880:intron 40.0%
! AGCTCCTTTTGTCTCTTTCT+CGG - chr4_1:81005871-81005890 None:intergenic 40.0%
TACTGCTTGAACGCGTTTAA+TGG + chr4_1:81005894-81005913 Msa0576880:CDS 40.0%
!! GTCAAGTGTTCACTTTTCCA+AGG + chr4_1:81006146-81006165 Msa0576880:intron 40.0%
CTCGGGACTATAATGCAAAT+TGG + chr4_1:81006327-81006346 Msa0576880:CDS 40.0%
CAAGGTATACATCATCATCG+AGG - chr4_1:81006370-81006389 None:intergenic 40.0%
! CTCGATGATGATGTATACCT+TGG + chr4_1:81006368-81006387 Msa0576880:CDS 40.0%
! TGAAACTGTTTTCTGCACCA+AGG - chr4_1:81006388-81006407 None:intergenic 40.0%
ACCGATTGATAAACTCTCCA+AGG - chr4_1:81006490-81006509 None:intergenic 40.0%
! TTTATCAATCGGTTTCGGCA+TGG + chr4_1:81006497-81006516 Msa0576880:CDS 40.0%
!! GGCACCATTAATGGTGTTAT+TGG + chr4_1:81006578-81006597 Msa0576880:CDS 40.0%
AGAAGCTTCAGTCAAACTTG+AGG + chr4_1:81006642-81006661 Msa0576880:CDS 40.0%
! GAAGCCAGAAACTTTTTGGA+TGG + chr4_1:81006737-81006756 Msa0576880:CDS 40.0%
! AGCCAGAAACTTTTTGGATG+GGG + chr4_1:81006739-81006758 Msa0576880:CDS 40.0%
ATCCCCATCCAAAAAGTTTC+TGG - chr4_1:81006744-81006763 None:intergenic 40.0%
TGATCTCAAACGCAGTAAGA+TGG + chr4_1:81006781-81006800 Msa0576880:CDS 40.0%
AGTCAACTCTTCTACTCTCT+TGG - chr4_1:81006849-81006868 None:intergenic 40.0%
AGAGAGTAGAAGAGTTGACT+AGG + chr4_1:81006849-81006868 Msa0576880:CDS 40.0%
AGTAGGGGTAAGAAATCAGA+TGG + chr4_1:81007171-81007190 Msa0576880:three_prime_UTR 40.0%
AAAGGGTCAAATTCGAGGAG+GGG + chr4_1:80995723-80995742 Msa0576880:five_prime_UTR 45.0%
TCAAATTCGAGGAGGGGTTT+GGG + chr4_1:80995729-80995748 Msa0576880:five_prime_UTR 45.0%
!! ACAGTTTCTCTCGGTGTTGA+TGG - chr4_1:80995924-80995943 None:intergenic 45.0%
! AACGTTGGTAGGTTTGTGAG+CGG - chr4_1:80995995-80996014 None:intergenic 45.0%
AGAATGAGATTGAGGTCCTG+AGG - chr4_1:80996048-80996067 None:intergenic 45.0%
CTCGATACGAGTACATTTCC+TGG - chr4_1:80996161-80996180 None:intergenic 45.0%
GATTCACTTGCTTACTGCTC+AGG + chr4_1:80996180-80996199 Msa0576880:CDS 45.0%
!!! TATTTTGGCTCGTCCTGAAG+TGG + chr4_1:80996791-80996810 Msa0576880:intron 45.0%
TGGATGTTCGTTACCACTTC+AGG - chr4_1:80996807-80996826 None:intergenic 45.0%
TCTCAAACAGGGTGAAACAC+AGG + chr4_1:80997119-80997138 Msa0576880:intron 45.0%
TATTAACCACAGCTGACTGC+TGG - chr4_1:80997312-80997331 None:intergenic 45.0%
TTCTGCCATCCAGATCAATG+GGG + chr4_1:80997764-80997783 Msa0576880:intron 45.0%
AGAAACATCCCCCATTGATC+TGG - chr4_1:80997776-80997795 None:intergenic 45.0%
! GGGGATGTTTCTGATCGTAT+AGG + chr4_1:80997784-80997803 Msa0576880:CDS 45.0%
! AAGACCAACGGATAATGGTC+AGG + chr4_1:80997807-80997826 Msa0576880:CDS 45.0%
GGTGAACAAATCACCACTCA+AGG - chr4_1:80997860-80997879 None:intergenic 45.0%
AAGGTCATGCTTACGCAATC+AGG - chr4_1:80998332-80998351 None:intergenic 45.0%
ATCTCAACCATCTAACCGGT+AGG - chr4_1:80998498-80998517 None:intergenic 45.0%
CTAAAGCTCATGCATACGCA+GGG - chr4_1:80998562-80998581 None:intergenic 45.0%
ACTAAAGCTCATGCATACGC+AGG - chr4_1:80998563-80998582 None:intergenic 45.0%
! ATGCATGAGCTTTAGTGCAC+CGG + chr4_1:80998567-80998586 Msa0576880:intron 45.0%
ATAACTGAAAACGGGCAACC+CGG - chr4_1:80998589-80998608 None:intergenic 45.0%
CGGGGAGCAAAAATAAACCT+AGG - chr4_1:80998938-80998957 None:intergenic 45.0%
TCACCAACAACTCTGGCATT+CGG - chr4_1:80999058-80999077 None:intergenic 45.0%
CAAGGGTTTCTCCTTCACAA+AGG - chr4_1:80999206-80999225 None:intergenic 45.0%
CTTTGTGAAGGAGAAACCCT+TGG + chr4_1:80999204-80999223 Msa0576880:intron 45.0%
TTGTGAAGGAGAAACCCTTG+GGG + chr4_1:80999206-80999225 Msa0576880:intron 45.0%
AGGCATAAGATTTCCCCCAA+GGG - chr4_1:80999223-80999242 None:intergenic 45.0%
TTGTCCAAAGCCAACTATCG+TGG + chr4_1:80999508-80999527 Msa0576880:CDS 45.0%
! AGAACCACGATAGTTGGCTT+TGG - chr4_1:80999515-80999534 None:intergenic 45.0%
!!! CTTTTGGGTTGGATAGAAGG+AGG + chr4_1:80999656-80999675 Msa0576880:intron 45.0%
!! TTTGGGTTGGATAGAAGGAG+GGG + chr4_1:80999658-80999677 Msa0576880:intron 45.0%
! AAGATTTTGTTGAGGGCCCA+TGG + chr4_1:81000385-81000404 Msa0576880:CDS 45.0%
GTAGACTAAGCAACCCTGTA+TGG - chr4_1:81000732-81000751 None:intergenic 45.0%
! TGCATTGGCACGTTGATTGA+TGG + chr4_1:81000837-81000856 Msa0576880:intron 45.0%
GTCTCAAAATAGAGCCCCTT+GGG + chr4_1:81000932-81000951 Msa0576880:CDS 45.0%
TCTCAAAATAGAGCCCCTTG+GGG + chr4_1:81000933-81000952 Msa0576880:CDS 45.0%
AAGCTATGGAGATTCACAGG+TGG + chr4_1:81001014-81001033 Msa0576880:intron 45.0%
AGCTATGGAGATTCACAGGT+GGG + chr4_1:81001015-81001034 Msa0576880:intron 45.0%
!!! CACTAGTTTTGAACGTCGCA+TGG + chr4_1:81001134-81001153 Msa0576880:intron 45.0%
GTACCTTGACATTTGCCCTT+AGG - chr4_1:81001459-81001478 None:intergenic 45.0%
CATGCTAACATGTTGCCCTA+AGG - chr4_1:81001589-81001608 None:intergenic 45.0%
TCTGTGTGGTAGACCTTGAA+AGG + chr4_1:81001919-81001938 Msa0576880:CDS 45.0%
! TCCCTACGTGTTGTTCGTAA+TGG + chr4_1:81001990-81002009 Msa0576880:CDS 45.0%
TGGTTGAGTCTTGGATGCAA+AGG - chr4_1:81002068-81002087 None:intergenic 45.0%
AATGAATCTCGAGGATGAGC+TGG + chr4_1:81002286-81002305 Msa0576880:CDS 45.0%
GCTGGAAGAAACTGAGATTG+AGG + chr4_1:81002304-81002323 Msa0576880:CDS 45.0%
! ATTTGTTAACCCCACCGAGT+GGG + chr4_1:81002910-81002929 Msa0576880:intron 45.0%
! AAACTTTATCCCACTCGGTG+GGG - chr4_1:81002922-81002941 None:intergenic 45.0%
CTAAACTTTATCCCACTCGG+TGG - chr4_1:81002924-81002943 None:intergenic 45.0%
TCTTCTCCATCTCTTTCCCA+TGG + chr4_1:81003511-81003530 Msa0576880:intron 45.0%
CTTCTCCATCTCTTTCCCAT+GGG + chr4_1:81003512-81003531 Msa0576880:intron 45.0%
GCTGTAAGGATGTTGACAAC+TGG + chr4_1:81003554-81003573 Msa0576880:intron 45.0%
TAGCAGCTGCTAGTGCTATA+TGG + chr4_1:81003626-81003645 Msa0576880:intron 45.0%
CGTTTGCTTGCATTCTCCAA+AGG + chr4_1:81003946-81003965 Msa0576880:intron 45.0%
!! CACATGGAGACAGGTTTTGT+TGG + chr4_1:81004345-81004364 Msa0576880:intron 45.0%
!!! AGACAGGTTTTGTTGGCTAC+AGG + chr4_1:81004352-81004371 Msa0576880:intron 45.0%
!! TTTTGTTGGCTACAGGTGGT+GGG + chr4_1:81004359-81004378 Msa0576880:CDS 45.0%
AGAAGTAAAGCATGCCCAAC+TGG + chr4_1:81004420-81004439 Msa0576880:CDS 45.0%
GCACAAAGAAGAACAGATCG+AGG - chr4_1:81004604-81004623 None:intergenic 45.0%
!! TCTTACTTGCTATGTGCCCT+TGG + chr4_1:81004986-81005005 Msa0576880:CDS 45.0%
TAAGAGATGGCCATCACCAA+GGG - chr4_1:81005005-81005024 None:intergenic 45.0%
TTAAGAGATGGCCATCACCA+AGG - chr4_1:81005006-81005025 None:intergenic 45.0%
GGTCAGATGCAGCAAATACA+TGG - chr4_1:81005132-81005151 None:intergenic 45.0%
GAAAAGCAGCGGAGTTGAAA+GGG - chr4_1:81005231-81005250 None:intergenic 45.0%
AGACCCAGAAACAACGATAG+GGG - chr4_1:81005290-81005309 None:intergenic 45.0%
CAAGACCCAGAAACAACGAT+AGG - chr4_1:81005292-81005311 None:intergenic 45.0%
TATGCCATCAGGAGCAAACT+AGG + chr4_1:81005474-81005493 Msa0576880:CDS 45.0%
!! ATGTCCTAGTTTGCTCCTGA+TGG - chr4_1:81005481-81005500 None:intergenic 45.0%
! AATGCATTTTGTCCGCTTGC+TGG + chr4_1:81005550-81005569 Msa0576880:CDS 45.0%
GTTGCCGAGAAAGAGACAAA+AGG + chr4_1:81005864-81005883 Msa0576880:CDS 45.0%
CGTGAATTACAGTCCGAATG+TGG + chr4_1:81005984-81006003 Msa0576880:CDS 45.0%
ATACTGCTCATGAGGAAGAG+AGG - chr4_1:81006612-81006631 None:intergenic 45.0%
GCTTCAGTCAAACTTGAGGA+AGG + chr4_1:81006646-81006665 Msa0576880:CDS 45.0%
! AGGAAGGTGATTAAAGGCGT+TGG + chr4_1:81006662-81006681 Msa0576880:CDS 45.0%
!! AAGGTGATTAAAGGCGTTGG+AGG + chr4_1:81006665-81006684 Msa0576880:CDS 45.0%
TAAATGATCTCCACTGCTCG+TGG - chr4_1:81006697-81006716 None:intergenic 45.0%
AACTGAAACTTCCATCGCCT+TGG - chr4_1:81006816-81006835 None:intergenic 45.0%
ATCACTGAAGGCAAAAGCCA+TGG - chr4_1:81007002-81007021 None:intergenic 45.0%
CATAGTCACAGCATCACTGA+AGG - chr4_1:81007014-81007033 None:intergenic 45.0%
CTTCAGTGATGCTGTGACTA+TGG + chr4_1:81007012-81007031 Msa0576880:three_prime_UTR 45.0%
GTGATGCTGTGACTATGGAA+TGG + chr4_1:81007017-81007036 Msa0576880:three_prime_UTR 45.0%
GTCAAATTCGAGGAGGGGTT+TGG + chr4_1:80995728-80995747 Msa0576880:five_prime_UTR 50.0%
CACTTCTCACAACTACGGAG+CGG - chr4_1:80995858-80995877 None:intergenic 50.0%
CAGGAGTGAGTAACGTTGGT+AGG - chr4_1:80996006-80996025 None:intergenic 50.0%
AACGTTACTCACTCCTGCGT+CGG + chr4_1:80996009-80996028 Msa0576880:CDS 50.0%
ACTGGTAAAATTGCCGACGC+AGG - chr4_1:80996025-80996044 None:intergenic 50.0%
! CGGCAATTTTACCAGTCCTC+AGG + chr4_1:80996029-80996048 Msa0576880:CDS 50.0%
CTGACGCGAGAATGAGATTG+AGG - chr4_1:80996056-80996075 None:intergenic 50.0%
GTGATTTCTGTTCGGTCCTG+TGG + chr4_1:80996305-80996324 Msa0576880:intron 50.0%
TCTGCCATCCAGATCAATGG+GGG + chr4_1:80997765-80997784 Msa0576880:intron 50.0%
ACATCCCCCATTGATCTGGA+TGG - chr4_1:80997772-80997791 None:intergenic 50.0%
GCAATCAGGACTGTGGTAAC+TGG - chr4_1:80998318-80998337 None:intergenic 50.0%
TGCTTACGCAATCAGGACTG+TGG - chr4_1:80998325-80998344 None:intergenic 50.0%
CATCTAACCGGTAGGAAGGT+TGG - chr4_1:80998490-80998509 None:intergenic 50.0%
! CAACCTTCCTACCGGTTAGA+TGG + chr4_1:80998488-80998507 Msa0576880:intron 50.0%
CAACCATCTAACCGGTAGGA+AGG - chr4_1:80998494-80998513 None:intergenic 50.0%
! TGCATGAGCTTTAGTGCACC+GGG + chr4_1:80998568-80998587 Msa0576880:intron 50.0%
TTGCAAGCCACTGTGAGATC+CGG - chr4_1:80998958-80998977 None:intergenic 50.0%
TCTCCGAATGCCAGAGTTGT+TGG + chr4_1:80999052-80999071 Msa0576880:intron 50.0%
TCCTGCATCACCAACAACTC+TGG - chr4_1:80999065-80999084 None:intergenic 50.0%
!! AGAGTTGTTGGTGATGCAGG+AGG + chr4_1:80999064-80999083 Msa0576880:intron 50.0%
TGTGAAGGAGAAACCCTTGG+GGG + chr4_1:80999207-80999226 Msa0576880:intron 50.0%
GAGGCATAAGATTTCCCCCA+AGG - chr4_1:80999224-80999243 None:intergenic 50.0%
! GCTTGAGGAGCTCCAAGTTT+TGG + chr4_1:80999466-80999485 Msa0576880:CDS 50.0%
TAAGCACACCACAGAGTGGT+GGG - chr4_1:81000458-81000477 None:intergenic 50.0%
ATAAGCACACCACAGAGTGG+TGG - chr4_1:81000459-81000478 None:intergenic 50.0%
GGTCTCAAAATAGAGCCCCT+TGG + chr4_1:81000931-81000950 Msa0576880:CDS 50.0%
TGCAATGGAAGTCTCCCCAA+GGG - chr4_1:81000950-81000969 None:intergenic 50.0%
ATGCAATGGAAGTCTCCCCA+AGG - chr4_1:81000951-81000970 None:intergenic 50.0%
GCTATGGAGATTCACAGGTG+GGG + chr4_1:81001016-81001035 Msa0576880:intron 50.0%
TGCCCTAAGGGCAAATGTCA+AGG + chr4_1:81001453-81001472 Msa0576880:intron 50.0%
! TGCCCTAAGGGCACAAGATA+AGG - chr4_1:81001576-81001595 None:intergenic 50.0%
!! GCCCATTGTTGACTTCTGTG+TGG + chr4_1:81001905-81001924 Msa0576880:CDS 50.0%
GTGGTAGACCTTGAAAGGCA+AGG + chr4_1:81001924-81001943 Msa0576880:CDS 50.0%
AGCAAGTCACAACCTGACCT+TGG - chr4_1:81001950-81001969 None:intergenic 50.0%
!! GACTTGCTCTGGAGCTTACA+AGG + chr4_1:81001962-81001981 Msa0576880:CDS 50.0%
!! TGCTCTGGAGCTTACAAGGA+TGG + chr4_1:81001966-81001985 Msa0576880:CDS 50.0%
GCTGCAGAAATGCTGTCATG+TGG + chr4_1:81002517-81002536 Msa0576880:intron 50.0%
!! GATTTGTTAACCCCACCGAG+TGG + chr4_1:81002909-81002928 Msa0576880:intron 50.0%
ATTCAGGAGCTCTCTGGTTG+TGG - chr4_1:81003316-81003335 None:intergenic 50.0%
ATAGCACTAGCAGCTGCTAG+CGG - chr4_1:81003625-81003644 None:intergenic 50.0%
CAGCTGCTAGTGCTATATGG+AGG + chr4_1:81003629-81003648 Msa0576880:intron 50.0%
!!! CAGGTTTTGTTGGCTACAGG+TGG + chr4_1:81004355-81004374 Msa0576880:intron 50.0%
!! GTTTTGTTGGCTACAGGTGG+TGG + chr4_1:81004358-81004377 Msa0576880:CDS 50.0%
! GCTGCTAGCTGACTCTGATT+GGG - chr4_1:81004490-81004509 None:intergenic 50.0%
! TGCTGCTAGCTGACTCTGAT+TGG - chr4_1:81004491-81004510 None:intergenic 50.0%
AGCTAGCAGCAGTTGGAATG+TGG + chr4_1:81004500-81004519 Msa0576880:CDS 50.0%
TTGCTATGTGCCCTTGGTGA+TGG + chr4_1:81004992-81005011 Msa0576880:CDS 50.0%
GGAAAAGCAGCGGAGTTGAA+AGG - chr4_1:81005232-81005251 None:intergenic 50.0%
ATACCTGTCGGGAAAAGCAG+CGG - chr4_1:81005242-81005261 None:intergenic 50.0%
AAGTCTGGTCATCCAGCAAG+CGG - chr4_1:81005565-81005584 None:intergenic 50.0%
! ATTCACGAGTACCGTCTTCC+CGG - chr4_1:81005971-81005990 None:intergenic 50.0%
ATAAAGCCAGTATGTGCCCG+TGG - chr4_1:81006013-81006032 None:intergenic 50.0%
!! GCATGAGGAAGGTGCTATTG+AGG + chr4_1:81006298-81006317 Msa0576880:intron 50.0%
! GTGCTATTGAGGAGAGAGCT+CGG + chr4_1:81006309-81006328 Msa0576880:CDS 50.0%
TGCTATTGAGGAGAGAGCTC+GGG + chr4_1:81006310-81006329 Msa0576880:CDS 50.0%
! AAGGCGCCACTGATGAAGAA+CGG + chr4_1:81006435-81006454 Msa0576880:CDS 50.0%
AGTTGGAATCTGGCCTACGT+CGG - chr4_1:81006549-81006568 None:intergenic 50.0%
GGATGAGATTTCCAAGGCGA+TGG + chr4_1:81006802-81006821 Msa0576880:CDS 50.0%
GGCGATGGAAGTTTCAGTTG+AGG + chr4_1:81006817-81006836 Msa0576880:CDS 50.0%
GACGCAGGAGTGAGTAACGT+TGG - chr4_1:80996010-80996029 None:intergenic 55.0%
GAGATTGAGGTCCTGAGGAC+TGG - chr4_1:80996043-80996062 None:intergenic 55.0%
GTGTCACAGGCTGTCTCGAT+AGG + chr4_1:80996617-80996636 Msa0576880:intron 55.0%
GTTTCACCAGCAGTCAGCTG+TGG + chr4_1:80997303-80997322 Msa0576880:intron 55.0%
TGCAAGCCACTGTGAGATCC+GGG - chr4_1:80998957-80998976 None:intergenic 55.0%
!! GCCAGAGTTGTTGGTGATGC+AGG + chr4_1:80999061-80999080 Msa0576880:intron 55.0%
AAGCACACCACAGAGTGGTG+GGG - chr4_1:81000457-81000476 None:intergenic 55.0%
GCAATGGAAGTCTCCCCAAG+GGG - chr4_1:81000949-81000968 None:intergenic 55.0%
GACCTTGAAAGGCAAGGCCA+AGG + chr4_1:81001930-81001949 Msa0576880:CDS 55.0%
!! GACCTTGGCCTTGCCTTTCA+AGG - chr4_1:81001935-81001954 None:intergenic 55.0%
TGAAAGGCAAGGCCAAGGTC+AGG + chr4_1:81001935-81001954 Msa0576880:CDS 55.0%
!! GGTCAGGTTGTGACTTGCTC+TGG + chr4_1:81001951-81001970 Msa0576880:CDS 55.0%
CCACTCATTCAGGAGCTCTC+TGG - chr4_1:81003322-81003341 None:intergenic 55.0%
CCAGAGAGCTCCTGAATGAG+TGG + chr4_1:81003319-81003338 Msa0576880:CDS 55.0%
ACGGTGCATGCCACTCATTC+AGG - chr4_1:81003332-81003351 None:intergenic 55.0%
AGCTACTGCCAATGCAACCC+AGG + chr4_1:81003371-81003390 Msa0576880:CDS 55.0%
CAGAGTCAGCTAGCAGCAGT+TGG + chr4_1:81004493-81004512 Msa0576880:CDS 55.0%
GCACGGGCGAGTTAACAGAT+AGG + chr4_1:81005044-81005063 Msa0576880:CDS 55.0%
! TTCCATTGGGGGAGCATGCA+CGG + chr4_1:81005447-81005466 Msa0576880:CDS 55.0%
AGCTGTACAAGTGGGTGCTC+CGG + chr4_1:81005949-81005968 Msa0576880:CDS 55.0%
CAGTCCGAATGTGGACACCA+CGG + chr4_1:81005993-81006012 Msa0576880:CDS 55.0%
AGTCCGAATGTGGACACCAC+GGG + chr4_1:81005994-81006013 Msa0576880:CDS 55.0%
AGGCGCCACTGATGAAGAAC+GGG + chr4_1:81006436-81006455 Msa0576880:CDS 55.0%
ACGACCCCGTTCTTCATCAG+TGG - chr4_1:81006444-81006463 None:intergenic 55.0%
AGAACGGGGTCGTCTTGAAG+TGG + chr4_1:81006451-81006470 Msa0576880:CDS 55.0%
GTGGCTGGTGAGTATCACCT+TGG + chr4_1:81006470-81006489 Msa0576880:CDS 55.0%
ATCTGGCCTACGTCGGAATC+TGG - chr4_1:81006542-81006561 None:intergenic 55.0%
TGGCGTCGCAACGCACACAA+CGG + chr4_1:80995777-80995796 Msa0576880:five_prime_UTR 60.0%
GCTTACTGCTCAGGGCTTGC+AGG + chr4_1:80996189-80996208 Msa0576880:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr4_1:80998535-80998554 Msa0576880:intron 60.0%
CTCATGCATACGCAGGGTCC+GGG - chr4_1:80998556-80998575 None:intergenic 60.0%
GCTCATGCATACGCAGGGTC+CGG - chr4_1:80998557-80998576 None:intergenic 60.0%
TTGCTCCCCGGATCTCACAG+TGG + chr4_1:80998948-80998967 Msa0576880:intron 60.0%
GCAAGCCACTGTGAGATCCG+GGG - chr4_1:80998956-80998975 None:intergenic 60.0%
AGCACACCACAGAGTGGTGG+GGG - chr4_1:81000456-81000475 None:intergenic 60.0%
GGAGATTCACAGGTGGGGTG+AGG + chr4_1:81001021-81001040 Msa0576880:intron 60.0%
!!! ACTCCGCTGCTTTTCCCGAC+AGG + chr4_1:81005236-81005255 Msa0576880:CDS 60.0%
TGCACGGCGGATATGCCATC+AGG + chr4_1:81005463-81005482 Msa0576880:CDS 60.0%
GCTGTACAAGTGGGTGCTCC+GGG + chr4_1:81005950-81005969 Msa0576880:CDS 60.0%
AAGTGGGTGCTCCGGGAAGA+CGG + chr4_1:81005957-81005976 Msa0576880:CDS 60.0%
GTGCCCGTGGTGTCCACATT+CGG - chr4_1:81006000-81006019 None:intergenic 60.0%
TGGACACCACGGGCACATAC+TGG + chr4_1:81006004-81006023 Msa0576880:CDS 60.0%
GGCGCCACTGATGAAGAACG+GGG + chr4_1:81006437-81006456 Msa0576880:CDS 60.0%
CGCTTGCCAGATTCCGACGT+AGG + chr4_1:81006533-81006552 Msa0576880:CDS 60.0%
CGGGAAGGGGTCCCACCATT+TGG - chr4_1:80998537-80998556 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr4_1:80998550-80998569 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr4_1:80998551-80998570 None:intergenic 65.0%
TGCATACGCAGGGTCCGGGA+AGG - chr4_1:80998552-80998571 None:intergenic 65.0%
! CCACAGAGTGGTGGGGGAAC+CGG - chr4_1:81000450-81000469 None:intergenic 65.0%
!! GGCTACAGGTGGTGGGCACT+TGG + chr4_1:81004366-81004385 Msa0576880:CDS 65.0%
! CATTGGGGGAGCATGCACGG+CGG + chr4_1:81005450-81005469 Msa0576880:CDS 65.0%
CGGGGTCGTCTTGAAGTGGC+TGG + chr4_1:81006455-81006474 Msa0576880:CDS 65.0%
GAGGACTCAGCCACGAGCAG+TGG + chr4_1:81006684-81006703 Msa0576880:CDS 65.0%
CCGGTTCCCCCACCACTCTG+TGG + chr4_1:81000447-81000466 Msa0576880:CDS 70.0%
CGCCGTGCATGCTCCCCCAA+TGG - chr4_1:81005452-81005471 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 80995702 81007204 80995702 ID=Msa0576880;Name=Msa0576880
chr4_1 mRNA 80995702 81007204 80995702 ID=Msa0576880-mRNA-1;Parent=Msa0576880;Name=Msa0576880-mRNA-1;_AED=0.08;_eAED=0.08;_QI=265|1|1|1|0.94|1|19|324|1089
chr4_1 exon 80995702 80996070 80995702 ID=Msa0576880-mRNA-1:exon:29117;Parent=Msa0576880-mRNA-1
chr4_1 exon 80996162 80996210 80996162 ID=Msa0576880-mRNA-1:exon:29118;Parent=Msa0576880-mRNA-1
chr4_1 exon 80996951 80997010 80996951 ID=Msa0576880-mRNA-1:exon:29119;Parent=Msa0576880-mRNA-1
chr4_1 exon 80997129 80997220 80997129 ID=Msa0576880-mRNA-1:exon:29120;Parent=Msa0576880-mRNA-1
chr4_1 exon 80997777 80997828 80997777 ID=Msa0576880-mRNA-1:exon:29121;Parent=Msa0576880-mRNA-1
chr4_1 exon 80997970 80998032 80997970 ID=Msa0576880-mRNA-1:exon:29122;Parent=Msa0576880-mRNA-1
chr4_1 exon 80998148 80998197 80998148 ID=Msa0576880-mRNA-1:exon:29123;Parent=Msa0576880-mRNA-1
chr4_1 exon 80999466 80999541 80999466 ID=Msa0576880-mRNA-1:exon:29124;Parent=Msa0576880-mRNA-1
chr4_1 exon 81000333 81000542 81000333 ID=Msa0576880-mRNA-1:exon:29125;Parent=Msa0576880-mRNA-1
chr4_1 exon 81000670 81000776 81000670 ID=Msa0576880-mRNA-1:exon:29126;Parent=Msa0576880-mRNA-1
chr4_1 exon 81000924 81001032 81000924 ID=Msa0576880-mRNA-1:exon:29127;Parent=Msa0576880-mRNA-1
chr4_1 exon 81001831 81002031 81001831 ID=Msa0576880-mRNA-1:exon:29128;Parent=Msa0576880-mRNA-1
chr4_1 exon 81002173 81002388 81002173 ID=Msa0576880-mRNA-1:exon:29129;Parent=Msa0576880-mRNA-1
chr4_1 exon 81003282 81003392 81003282 ID=Msa0576880-mRNA-1:exon:29130;Parent=Msa0576880-mRNA-1
chr4_1 exon 81004358 81004633 81004358 ID=Msa0576880-mRNA-1:exon:29131;Parent=Msa0576880-mRNA-1
chr4_1 exon 81004983 81005257 81004983 ID=Msa0576880-mRNA-1:exon:29132;Parent=Msa0576880-mRNA-1
chr4_1 exon 81005373 81005724 81005373 ID=Msa0576880-mRNA-1:exon:29133;Parent=Msa0576880-mRNA-1
chr4_1 exon 81005819 81006103 81005819 ID=Msa0576880-mRNA-1:exon:29134;Parent=Msa0576880-mRNA-1
chr4_1 exon 81006299 81007204 81006299 ID=Msa0576880-mRNA-1:exon:29135;Parent=Msa0576880-mRNA-1
chr4_1 five_prime_UTR 80995702 80995966 80995702 ID=Msa0576880-mRNA-1:five_prime_utr;Parent=Msa0576880-mRNA-1
chr4_1 CDS 80995967 80996070 80995967 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 80996162 80996210 80996162 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 80996951 80997010 80996951 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 80997129 80997220 80997129 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 80997777 80997828 80997777 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 80997970 80998032 80997970 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 80998148 80998197 80998148 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 80999466 80999541 80999466 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 81000333 81000542 81000333 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 81000670 81000776 81000670 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 81000924 81001032 81000924 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 81001831 81002031 81001831 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 81002173 81002388 81002173 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 81003282 81003392 81003282 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 81004358 81004633 81004358 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 81004983 81005257 81004983 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 81005373 81005724 81005373 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 81005819 81006103 81005819 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 CDS 81006299 81006880 81006299 ID=Msa0576880-mRNA-1:cds;Parent=Msa0576880-mRNA-1
chr4_1 three_prime_UTR 81006881 81007204 81006881 ID=Msa0576880-mRNA-1:three_prime_utr;Parent=Msa0576880-mRNA-1
Gene Sequence

>Msa0576880

ATGAGTATATGGAACTACGTTGTTACCGCTCACAAACCTACCAACGTTACTCACTCCTGCGTCGGCAATTTTACCAGTCCTCAGGACCTCAATCTCATTCTCGCGAAATGTACTCGTATCGAGATTCACTTGCTTACTGCTCAGGGCTTGCAGTCTATTTTGGATGTGCCGTTATATGGAAGAATTGCTACGCTTGAGCTATTTCGCCCTCATGGTGAAACACAGGATTTTCTGTTCATTGCTACCGAAAGATACAAGTTTTGTGTTCTTCAATGGGATACCGAGAAATCCGAGCTTGTTACACGATCAATGGGGGATGTTTCTGATCGTATAGGAAGACCAACGGATAATGGTCAGATTGGTATTATAGATCCTGATTGTAGGTTGATTGGACTCCACTTGTATGACGGTTTGTTTAAGGTTATTCCCTTTGACAATAAAGGACAGCTCAAGGAAGCTTTTAATATCAGGCTTGAGGAGCTCCAAGTTTTGGACATTAAATTTCTGTATGGTTGTCCAAAGCCAACTATCGTGGTTCTTTACCAGGATAACAAAGATGCCCGTCATGTTAAAACATATGAGGTTGCTCTTAAGGATAAAGATTTTGTTGAGGGCCCATGGTCTCAAAACAGTCTTGATAATGGGGCTGATTTATTGATACCGGTTCCCCCACCACTCTGTGGTGTGCTTATTATTGGAGAAGAAACCATAGTATACTGCAGTGCTAATGGTTTTAAAGCTATTCCAATCAGAGCTGCAATTACAAAAGCCTATGGAAGAGTTGATCCCGATGGTTCTAGATATTTACTTGGTGACCATACAGGGTTGCTTAGTCTACTTGTAATAACCCACGAGAAAGAAAAGGTTACTGGTCTCAAAATAGAGCCCCTTGGGGAGACTTCCATTGCATCTACGATTTCATACCTTGATAATGCATTTGTCTATATTGGTTCAAGCTATGGAGATTCACAGCTCATTAAACTAAATCTTCAGCCTGATTCAAAAGGTTCTTATGTGGAAGTCTTGGAAAGGTATGTCAATTTGGGGCCCATTGTTGACTTCTGTGTGGTAGACCTTGAAAGGCAAGGCCAAGGTCAGGTTGTGACTTGCTCTGGAGCTTACAAGGATGGTTCCCTACGTGTTGTTCGTAATGGAATAGGTATCAATGAACAGGCATCAGTAGAACTTCAAGGTATCAAAGGAATGTGGTCACTAAGATCCTCAACAGATGATCCTTTTGACACTTTCCTGGTTGTAAGTTTTATAAGTGAAACAAGAATATTAGCAATGAATCTCGAGGATGAGCTGGAAGAAACTGAGATTGAGGGATTCTCTTCTCAAGTACAGACATTATTTTGCCATGATGCAGTTCACAATCAACTTGTACAAGTCACTTCAAACTCTGTAAGACTAGTCAGTTCCACAACCAGAGAGCTCCTGAATGAGTGGCATGCACCGTCAGACTATTCAGTAAATGTAGCTACTGCCAATGCAACCCAGGTTTTGTTGGCTACAGGTGGTGGGCACTTGGTTTACCTCGAAATTGGAGATGGTATATTACAAGAAGTAAAGCATGCCCAACTGGAGTATGAAATCTCATGCCTAGACATTAATCCCATTGGTGAAAATCCCAATCAGAGTCAGCTAGCAGCAGTTGGAATGTGGACTGACATAAGTGTTAGACTTTTTTCTCTTCCTGACCTTAATCTCATCACAAAGGAGCATTTAGGAGGAGAGATAATACCTCGATCTGTTCTTCTTTGTGCGTTTGAAGGGATATCTTACTTGCTATGTGCCCTTGGTGATGGCCATCTCTTAAACTTTATGTTGAACACAAGCACGGGCGAGTTAACAGATAGGAAAAAGGTCTCTCTTGGAACACAACCTATTACTCTACGGACTTTCTCATCCAAGAATACTACCCATGTATTTGCTGCATCTGACCGGCCAACTGTGATTTATAGTAGTAACAAAAAACTACTTTATAGTAATGTTAATCTGAAGGAAGTGAGTCACATGTGCCCTTTCAACTCCGCTGCTTTTCCCGACAGTTTAGCGATTGCAAAAGAAGGTGAGCTTACTATTGGCACCATTGATGACATACAAAAACTTCATATTCGCACTATTCCATTGGGGGAGCATGCACGGCGGATATGCCATCAGGAGCAAACTAGGACATTTGCTATTTGTAGTTTGAAGTATAACTCAGCAAGTGCTGAAGAATCTGAAATGCATTTTGTCCGCTTGCTGGATGACCAGACTTTTGACTTCATATCGGTTTATCCACTTGACACTTATGAATATGGTTGCTTTATAATTAGCTGCTCCTTCTCAGATGATAATAACGTGTATTACTGTGTTGGAACTGCATATGTATTGCCTGAGGAAAATGAACCAACCAAGGGAAGGATTCTCGTTTTTTCTGTTGAAGAGGGGAAGCTACAGTTAGTTGCCGAGAAAGAGACAAAAGGAGCTGTTTACTGCTTGAACGCGTTTAATGGTAAATTGCTTGCTGCTATTAATCAAAAGATTCAGCTGTACAAGTGGGTGCTCCGGGAAGACGGTACTCGTGAATTACAGTCCGAATGTGGACACCACGGGCACATACTGGCTTTATATGTGCAAACTAGAGGAGATTTTATTGTAGTCGGTGATCTGATGAAGTCCATCTCCTTGTTAATCTATAAGCATGAGGAAGGTGCTATTGAGGAGAGAGCTCGGGACTATAATGCAAATTGGATGTCAGCTGTTGAAATCCTCGATGATGATGTATACCTTGGTGCAGAAAACAGTTTCAATCTCTTCACTGTTCGAAAAAATAGCGAAGGCGCCACTGATGAAGAACGGGGTCGTCTTGAAGTGGCTGGTGAGTATCACCTTGGAGAGTTTATCAATCGGTTTCGGCATGGCTCTCTTGTTATGCGCTTGCCAGATTCCGACGTAGGCCAGATTCCAACTGTTATATTTGGCACCATTAATGGTGTTATTGGGGTAATCGCCTCTCTTCCTCATGAGCAGTATGTATTCTTAGAGAAGCTTCAGTCAAACTTGAGGAAGGTGATTAAAGGCGTTGGAGGACTCAGCCACGAGCAGTGGAGATCATTTAACAATGAGAAGAAAACTGTAGAAGCCAGAAACTTTTTGGATGGGGATTTAATCGAGTCATTTCTTGATCTCAAACGCAGTAAGATGGATGAGATTTCCAAGGCGATGGAAGTTTCAGTTGAGGAGTTAGCCAAGAGAGTAGAAGAGTTGACTAGGTTGCACTGA
Protein sequence

>Msa0576880

MSIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLILAKCTRIEIHLLTAQGLQSILDVPLYGRIATLELFRPHGETQDFLFIATERYKFCVLQWDTEKSELVTRSMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNSLDNGADLLIPVPPPLCGVLIIGEETIVYCSANGFKAIPIRAAITKAYGRVDPDGSRYLLGDHTGLLSLLVITHEKEKVTGLKIEPLGETSIASTISYLDNAFVYIGSSYGDSQLIKLNLQPDSKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFSSQVQTLFCHDAVHNQLVQVTSNSVRLVSSTTRELLNEWHAPSDYSVNVATANATQVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPIGENPNQSQLAAVGMWTDISVRLFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQTRTFAICSLKYNSASAEESEMHFVRLLDDQTFDFISVYPLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPTKGRILVFSVEEGKLQLVAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLREDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDVYLGAENSFNLFTVRKNSEGATDEERGRLEVAGEYHLGEFINRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLKRSKMDEISKAMEVSVEELAKRVEELTRLH*